HHSEARCH alignment of GI: 254781108 and SCOP domain: d1n3ya_

Alignment
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72  E-value=1.7e-17  Score=120.60  Aligned_cols=180  Identities=17%  Similarity=0.245  Sum_probs=128.2

Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r  147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK  226 (398)
Q Consensus       147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  226 (398)
                      ..|+++++|.|+||...                                             +....+..+..+++.+. 
T Consensus         2 e~DivfvlD~S~Sm~~~---------------------------------------------~~~~~k~~~~~~i~~l~-   35 (189)
T d1n3ya_           2 EQDIVFLIDGSGSISSR---------------------------------------------NFATMMNFVRAVISQFQ-   35 (189)
T ss_dssp             CEEEEEEEECCTTSCHH---------------------------------------------HHHHHHHHHHHHHTTSC-
T ss_pred             CCCEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHHC-
T ss_conf             74199999697998869---------------------------------------------99999999999999708-


Q ss_pred             CCCCCCCCCEEEEEEECCCCCCCCCCCCCCC--CHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             2768776521346541267765431123568--9999999973577-888744588999999961134666665667666
Q gi|254781108|r  227 AIQEKKNLSVRIGTIAYNIGIVGNQCTPLSN--NLNEVKSRLNKLN-PYENTNTYPAMHHAYRELYNEKESSHNTIGSTR  303 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~--~~~~~~~~I~~l~-~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~  303 (398)
                            ....+.+.+.|+......  .+|+.  +..++...|+.+. .+|+|+++.+|.++.+.++....+.     .++
T Consensus        36 ------~~~~rv~vv~fs~~~~~~--~~l~~~~~~~~~~~~i~~~~~~~g~t~~~~al~~a~~~~f~~~~~~-----r~~  102 (189)
T d1n3ya_          36 ------RPSTQFSLMQFSNKFQTH--FTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGA-----RRD  102 (189)
T ss_dssp             ------TTTEEEEEEEESSSEEEE--ECHHHHHHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTC-----CTT
T ss_pred             ------CCCCEEEEEEEECCCEEE--CCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC-----CCC
T ss_conf             ------998789999953121010--0235400288999998754343300138999999999984111278-----888


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCC--CCEEEECCHHHHHH
Q ss_conf             65169981588778777776631489999999978988999995479---75589999985199--81899469899999
Q gi|254781108|r  304 LKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSS--GQFFAVNDSRELLE  378 (398)
Q Consensus       304 ~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~--~~yy~a~~~~~L~~  378 (398)
                      .+|++||+|||..+....     ....++..+|+.||.||+||++.+   ......|+.+|+.|  +++|.+++.++|.+
T Consensus       103 ~~kvivllTDG~~~~~~~-----~~~~~~~~~~~~gv~i~~Vgig~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~l~~  177 (189)
T d1n3ya_         103 AAKILIVITDGKKEGDSL-----DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKD  177 (189)
T ss_dssp             SEEEEEEEESSCCBSCSS-----CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGG
T ss_pred             CCEEEEEEECCCCCCCCC-----CHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHH
T ss_conf             732799995689888832-----399999999987994389833655566333999999966998660898289999999


Q ss_pred             HHHHHHHHHHHC
Q ss_conf             999999987512
Q gi|254781108|r  379 SFDKITDKIQEQ  390 (398)
Q Consensus       379 aF~~I~~~i~~~  390 (398)
                      .+++|.++|..+
T Consensus       178 i~~~i~~~ic~~  189 (189)
T d1n3ya_         178 IQNQLKEKIFAI  189 (189)
T ss_dssp             GHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCC
T ss_conf             999999751439


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Integrin alpha-x beta2
species: Human (Homo sapiens) [TaxId: 9606]