PSIBLAST alignment of GI: 254781108 and protein with PDB id: 1q0p
>gi|47168593|pdb|1Q0P|A Chain A, A Domain Of Factor B Length = 223
Score = 48.0 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 31/209 (14%)
Query: 202 APAPANRKIDVLIESAGNLVNSIQKAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNE 261
+ + +S NL+ + + + V T V S+N +
Sbjct: 25 SDSIGASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVSEAD---SSNADW 81
Query: 262 VKSRLNKLNP-----YENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKFVIFITDGEN 316
V +LN++N TNT A+ Y + + R + +I +TDG +
Sbjct: 82 VTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWN--RTRHVIILMTDGLH 139
Query: 317 SGASAYQNTLNTLQICEYMRN-------------AGMKIYSVAVS--APPEGQDLLRKCT 361
+ + + + + +R+ + +Y V + L
Sbjct: 140 NMGG------DPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKK 193
Query: 362 DSSGQFFAVNDSRELLESFDKITDKIQEQ 390
D+ F V D L + F ++ D+ Q
Sbjct: 194 DNEQHVFKVKDMENLEDVFYQMIDESQSL 222