RPSBLAST alignment of GI: 254781108 and protein with PDBid: 1q0p

>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1 Length = 223

 Score = 46.8 bits (110), Expect = 9e-06
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 23/200 (11%)

Query: 208 RKIDVLIESAGNLVNSIQKAIQEKKNLSVRIGTIAY--NIGIVGNQCTPLSNNLNEVKSR 265
                  +S  NL+  +         +  R G + Y     I        S+N + V  +
Sbjct: 31  SNFTGAKKSLVNLIEKVASY-----GVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQ 85

Query: 266 LNKLNPYE-----NTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKFVIFITDGEN---- 316
           LN++N  +      TNT  A+   Y  +    +      G  R +  +I +TDG +    
Sbjct: 86  LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV--PPEGWNRTRHVIILMTDGLHNMGG 143

Query: 317 ---SGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLR--KCTDSSGQFFAVN 371
              +     ++ L   +  +  R   + +Y   V       ++       D+    F V 
Sbjct: 144 DPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKVK 203

Query: 372 DSRELLESFDKITDKIQEQS 391
           D   L + F ++ D+ Q  S
Sbjct: 204 DMENLEDVFYQMIDESQSLS 223