RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781109|ref|YP_003065522.1| hypothetical protein
CLIBASIA_05055 [Candidatus Liberibacter asiaticus str. psy62]
         (86 letters)



>3c7a_A Octopine dehydrogenase; L) stereospecific opine
           dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD;
           2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B*
           (A:205-269,A:328-404)
          Length = 142

 Score = 25.5 bits (56), Expect = 2.8
 Identities = 5/24 (20%), Positives = 12/24 (50%)

Query: 22  FIDSIILWCQHSRHVDFVIDSLMN 45
             D +I+W Q     ++++D  + 
Sbjct: 88  SNDKLIMWAQEKIGKEYLVDGALT 111


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.347    0.155    0.474 

Gapped
Lambda     K      H
   0.267   0.0649    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 610,392
Number of extensions: 20881
Number of successful extensions: 139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 5
Length of query: 86
Length of database: 4,956,049
Length adjustment: 49
Effective length of query: 37
Effective length of database: 3,299,604
Effective search space: 122085348
Effective search space used: 122085348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 50 (23.2 bits)