HHsearch alignment for GI: 254781110 and conserved domain: cd01455

>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=96.22  E-value=0.092  Score=30.02  Aligned_cols=180  Identities=18%  Similarity=0.220  Sum_probs=102.7

Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC---CCCCC
Q ss_conf             012210223242233578766667534676653067889998999985104678765543022320487643---12445
Q gi|254781110|r  193 IELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVE---KNIEP  269 (420)
Q Consensus       193 ~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l  269 (420)
T Consensus         3 lr~v~DvSgSMYRFNg---------------~DgRL~R~lEa~~MvMEaf~g~e~k~~ydIvGHSGd~~~I~lV~~~~~P   67 (191)
T cd01455           3 LKLVVDVSGSMYRFNG---------------YDGRLDRSLEAVVMVMEAFDGFEDKIQYDIIGHSGDGPCVPFVKTNHPP   67 (191)
T ss_pred             EEEEEECCCCEEEECC---------------CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             6999973544233047---------------5328999999999999986175400578875026887751023489999


Q ss_pred             CCCHHH--HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf             778488--999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r  270 SWGTEK--VRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN  347 (420)
Q Consensus       270 t~~~~~--~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~  347 (420)
T Consensus        68 k~~keRl~vl~~M~AHs-QyC~sGD~Tlea~~~Ai~~l~a~~d-----------------~De~fVivlSDANL~RYgI-  128 (191)
T cd01455          68 KNNKERLETLKMMHAHS-QFCWSGDHTVEATEFAIKELAAKED-----------------FDEAIVIVLSDANLERYGI-  128 (191)
T ss_pred             CCHHHHHHHHHHHHHHH-HHEECCCCHHHHHHHHHHHHHHCCC-----------------CCCCEEEEECCCCHHHCCC-
T ss_conf             86689999999863120-1002588448999999998753026-----------------7760899981476443188-


Q ss_pred             CHHHHHHHHHH-HCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf             34899999999-78987999995489778999998621898279817989999999999987
Q gi|254781110|r  348 VNTIKICDKAK-ENFIKIVTISINASPNGQRLLKTCVSSPEYHYNVVNADSLIHVFQNISQL  408 (420)
Q Consensus       348 ~~~~~~c~~~k-~~gi~i~tIgf~~~~~~~~~l~~cas~~~~yf~a~~~~~L~~aF~~Ia~~  408 (420)
T Consensus       129 -~p~~l~~~l~~~p~V~a~~IfIgslg~eA~~l~~~l-P~G~~fVc~dt~~lP~il~qIfts  188 (191)
T cd01455         129 -QPKKLADALAREPNVNAFVIFIGSLSDEADQLQREL-PAGKAFVCMDTSELPHIMQQIFTS  188 (191)
T ss_pred             -CHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHC-CCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             -989999997338776689999735167999999748-997417853653678999999887