HHsearch alignment of GI: 254781110 and MMDB domain: 1jey_A_1-252

>1jey_A (A:1-252) KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens}
Probab=99.46  E-value=1.2e-12  Score=100.52  Aligned_cols=188  Identities=10%  Similarity=0.016  Sum_probs=131.1

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             44320122102232422335787666675346766530678899989999851046787655430223204876431244
Q gi|254781110|r  189 PIFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIE  268 (420)
Q Consensus       189 ~~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (420)
                      ...++.|++|+|+||......             ...+|++.++.++..++..+...   ....+++++.|++......+
T Consensus        34 ~~~div~viD~S~SM~~~~~~-------------~~~s~~~~~k~~~~~~i~~l~~~---~~~~~v~iv~f~~~~~~~~~   97 (252)
T 1jey_A           34 GRDSLIFLVDASKAMFESQSE-------------DELTPFDMSIQCIQSVYISKIIS---SDRDLLAVVFYGTEKDKNSV   97 (252)
T ss_dssp             CEEEEEEEEECSGGGGCCCSS-------------SSCCHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESCSSCBSTT
T ss_pred             CCEEEEEEEECCHHHCCCCCC-------------CCCCHHHHHHHHHHHHHHHCCCC---CCCCEEEEEEECCCCCCCCC
T ss_conf             845999999898788787888-------------89784999999999999961667---99981899997368988888


Q ss_pred             ----------CCCCHHHHHHHH----HH------HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----------577848899999----98------6404678876538899999986131012334554334776778776
Q gi|254781110|r  269 ----------PSWGTEKVRQYV----TR------DMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLP  328 (420)
Q Consensus       269 ----------lt~~~~~~~~~i----~~------~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~  328 (420)
                                ++.........+    +.      .....+.|+|+...||..+...|....                .+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~~al~~a~~~l~~~~----------------~~~  161 (252)
T 1jey_A           98 NFKNIYVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ----------------FKM  161 (252)
T ss_dssp             CCTTEEEEEEEECCCHHHHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS----------------SCE
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC----------------CCC
T ss_conf             9870799504888799999999976402331022103676654439999999999998613----------------023


Q ss_pred             CCCEEEEEECCCCCCCCCCC---HHHHHHHHHHHCCCEEEEEEECCCCCH------HHHHHHHHC-CCCCEEEECCHHHH
Q ss_conf             66248996068677777653---489999999978987999995489778------999998621-89827981798999
Q gi|254781110|r  329 FQKFIIFLTDGENNNFKSNV---NTIKICDKAKENFIKIVTISINASPNG------QRLLKTCVS-SPEYHYNVVNADSL  398 (420)
Q Consensus       329 ~~k~iil~TDG~~~~~~~~~---~~~~~c~~~k~~gi~i~tIgf~~~~~~------~~~l~~cas-~~~~yf~a~~~~~L  398 (420)
                      .+|+||++|||+++......   .....++.+++.||++|+|+++.+.+.      ..+++.++. ++++||.+.+  .|
T Consensus       162 ~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l  239 (252)
T 1jey_A          162 SHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESS--KL  239 (252)
T ss_dssp             EEEEEEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCCTTTTGGGTCC--------CCCCCBC--SH
T ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH--HH
T ss_conf             6747999889998788753779999999999997090478834688898761031687741113322234665156--69


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999998742
Q gi|254781110|r  399 IHVFQNISQLMV  410 (420)
Q Consensus       399 ~~aF~~Ia~~I~  410 (420)
                      .++++.|.+.++
T Consensus       240 ~~~~~~i~~~~~  251 (252)
T 1jey_A          240 EDLLRKVRAKET  251 (252)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHCCC
T ss_conf             999987642200