HHsearch alignment of GI: 254781110 and MMDB domain: 1rrk_A_1-214
>1rrk_A (A:1-214) Complement factor B; BB, hydrolase; 2.00A {Homo sapiens}
Probab=99.67 E-value=3.5e-15 Score=116.99 Aligned_cols=190 Identities=17% Similarity=0.202 Sum_probs=140.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
+++.+++|.|+||. ..+++.++.++..+++.+... ....|++++.|++......+++
T Consensus 2 lDvv~viD~SgSM~--------------------~~~~~~~k~~~~~~i~~l~~~---~~~~rv~iv~f~~~~~~~~~~~ 58 (214)
T 1rrk_A 2 MNIYLVLDGSDSIG--------------------ASNFTGAKKVLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVS 58 (214)
T ss_dssp EEEEEEEECSTTTC--------------------HHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESSSEEEEECTT
T ss_pred EEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCCC---CCCEEEEEEEECCEEEEEEECC
T ss_conf 34999993778898--------------------689999999999999847678---9961999999888168998179
Q ss_pred CCHHHHHHHHHHH------HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 7848899999986------4046788765388999999861310123345543347767787766624899606867777
Q gi|254781110|r 271 WGTEKVRQYVTRD------MDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNF 344 (420)
Q Consensus 271 ~~~~~~~~~i~~~------~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~ 344 (420)
.........++.+ ....+.|+|+...++.++...+..... ......++.+|++|++|||..+.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~~al~~a~~~~~~~~~----------~~~~~~~~~~~~iiliTDG~~~~~ 128 (214)
T 1rrk_A 59 EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDD----------VPPEGWNRTRHVIILMTDGLHNMG 128 (214)
T ss_dssp SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC----------------CGGGCEEEEEEEECSCCCSS
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC----------CCCCCCCCCCEEEEEEECCCCCCC
T ss_conf 8775689999999971755787688876899999999999764112----------476555688769999979756678
Q ss_pred CCCCHHHHH----------HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHHCC
Q ss_conf 765348999----------999997898799999548977899999862189--82798179899999999999874202
Q gi|254781110|r 345 KSNVNTIKI----------CDKAKENFIKIVTISINASPNGQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMVHR 412 (420)
Q Consensus 345 ~~~~~~~~~----------c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~~l 412 (420)
......... +..+|+.+|.+|+||+|.+.+...+-+.|..++ .+||.+.+.++|.++|++|.++|.+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igig~~~~~~~l~~ia~~~~g~~~~~~~~~~~~l~~~~~~i~~~l~~~ 208 (214)
T 1rrk_A 129 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQSL 208 (214)
T ss_dssp SCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSCGGGGT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 98489999999878888888878767949998347775799999977525787656166599999999998764324543
Q ss_pred E
Q ss_conf 5
Q gi|254781110|r 413 K 413 (420)
Q Consensus 413 r 413 (420)
-
T Consensus 209 ~ 209 (214)
T 1rrk_A 209 S 209 (214)
T ss_dssp T
T ss_pred C
T ss_conf 2