HHsearch results for GI: 254781110 and protein with PDBid: 1rrk_A
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.67 E-value=2.4e-15 Score=117.04 Aligned_cols=187 Identities=17% Similarity=0.187 Sum_probs=133.0
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
+|+.|++|.|+||. ..+++..++++..+++.+... .+..|++++.|++......+++
T Consensus 2 lDivfvlD~S~Sm~--------------------~~~~~~~k~~~~~~i~~~~~~---~~~~rv~lv~f~~~~~~~~~l~ 58 (497)
T 1rrk_A 2 MNIYLVLDGSDSIG--------------------ASNFTGAKKVLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVS 58 (497)
T ss_dssp EEEEEEEECSTTTC--------------------HHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESSSEEEEECTT
T ss_pred CCEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCCC---CCCEEEEEEEECCEEEEEECCC
T ss_conf 45899995779998--------------------699999999999999853658---9960999999878178997379
Q ss_pred CC----HHHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 78----48899999986404--6788765388999999861310123345543347767787766624899606867777
Q gi|254781110|r 271 WG----TEKVRQYVTRDMDS--LILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNF 344 (420)
Q Consensus 271 ~~----~~~~~~~i~~~~~~--~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~ 344 (420)
.. ...+.+.++++... ...|+|++..+|.++...+...... ........+|++||+|||..|.+
T Consensus 59 ~~~~~~~~~~~~~i~~i~~~~~~~~g~T~~~~al~~a~~~~~~~~~~----------~~~~~~~~~~viillTDG~~n~~ 128 (497)
T 1rrk_A 59 EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV----------PPEGWNRTRHVIILMTDGLHNMG 128 (497)
T ss_dssp SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC----------------CGGGCEEEEEEEECSCCCSS
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC----------CCCCCCCCCEEEEEEECCCCCCC
T ss_conf 87756899999999608566886888757999999999998652014----------75555678759999979767778
Q ss_pred CCCCHHHHH----------HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 765348999----------999997898799999548977899999862189---8279817989999999999987420
Q gi|254781110|r 345 KSNVNTIKI----------CDKAKENFIKIVTISINASPNGQRLLKTCVSSP---EYHYNVVNADSLIHVFQNISQLMVH 411 (420)
Q Consensus 345 ~~~~~~~~~----------c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~---~~yf~a~~~~~L~~aF~~Ia~~I~~ 411 (420)
......... ...+|+.||.||+||+|.+.+.. .|+..|+.+ .|||.+++.++|.++|..+.++-..
T Consensus 129 ~~p~~~~~~i~~~~~~~~~~~~~~~~gi~i~~vgiG~~~d~~-~L~~iAs~~~~~~~~f~~~d~~~L~~~~~~~~~~~~~ 207 (497)
T 1rrk_A 129 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQV-NINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQS 207 (497)
T ss_dssp SCTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHH-HHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSCGGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHH-HHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCC
T ss_conf 987899999998787777776687679079997368867999-9998751789850499949999999987530246602