HHsearch results for GI: 254781110 and protein with PDBid: 2iue_A
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=98.73 E-value=1.5e-07 Score=66.35 Aligned_cols=160 Identities=13% Similarity=0.134 Sum_probs=101.0
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC-CC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312-44
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKN-IE 268 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 268 (420)
+.|+.|++|.||||. .+++.+++.+..+++.+.... ...|++++.|.+..... .+
T Consensus 3 pvDl~fviD~SgSM~---------------------~~i~~~k~~~~~l~~~l~~~~---~~~r~g~v~f~d~~~~~~~~ 58 (212)
T 2iue_A 3 SVDLYFLMGLSGSAQ---------------------GHLSNVQTLGSDLLKALNEIS---RSGRIGFGSIVNMTFQHILK 58 (212)
T ss_dssp CEEEEEEEECCGGGT---------------------TTHHHHHHHHHHHHHHHHHHC---SCEEEEEEEESSSCEEEEEE
T ss_pred CEEEEEEEECCCCHH---------------------HHHHHHHHHHHHHHHHHHHCC---CCEEEEEEECCCCCCCCCCC
T ss_conf 468999998880526---------------------799999999999999997269---87089999705643433465
Q ss_pred CCCCHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 57784889999998640467-88765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r 269 PSWGTEKVRQYVTRDMDSLI-LKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN 347 (420)
Q Consensus 269 lt~~~~~~~~~i~~~~~~~~-~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~ 347 (420)
+|.+...+...++.+..... .++++...||.++...+...+ .+...|++|++|||..+.....
T Consensus 59 ~t~~~~~~~~~i~~~~~~gg~d~~e~~~~al~~a~~~~~~~~----------------~~~~~~~ivl~tD~~~~~~~~~ 122 (212)
T 2iue_A 59 LTADSSQFQRELRKQLVSGKLATPKGQLDAVVQVAICLGEIG----------------WRNGTRFLVLVTDNDFHLAKDK 122 (212)
T ss_dssp EESCHHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHHHT----------------CCSSEEEEEEECSSCBCCTTGG
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC----------------CCCCCEEEEEEECCCCCCCCCC
T ss_conf 576399999998630214898885069999999998766437----------------7777359999968986556630
Q ss_pred ----------------------------CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH-CCCCCEEEE
Q ss_conf ----------------------------348999999997898799999548977899999862-189827981
Q gi|254781110|r 348 ----------------------------VNTIKICDKAKENFIKIVTISINASPNGQRLLKTCV-SSPEYHYNV 392 (420)
Q Consensus 348 ----------------------------~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~ca-s~~~~yf~a 392 (420)
......+..++.++|.+....- .......+.-+ ..++.++..
T Consensus 123 ~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~i~~~~---~~~~~~~~~l~~~~~g~~v~~ 193 (212)
T 2iue_A 123 TLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLASKLAENNIQPIFVVP---SRMVKTYEKLTTFIPKLTIGE 193 (212)
T ss_dssp GGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHHHHHHHHTCEEEEEEE---HHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHHCCCCCHHH
T ss_conf 24445311587157525653567776777799999999863975899974---532789999999738741266