HHsearch results for GI: 254781110 and protein with PDBid: 2x5n_A
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.41 E-value=1.1e-11 Score=93.25 Aligned_cols=150 Identities=15% Similarity=0.075 Sum_probs=109.8
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-CCCCCC
Q ss_conf 2012210223242233578766667534676653067889998999985104678765543022320487643-124457
Q gi|254781110|r 192 LIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVE-KNIEPS 270 (420)
Q Consensus 192 ~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt 270 (420)
-+++++|.|+||... +..++|++.+++++..+++.+....+ ..++++..|.+... ...+++
T Consensus 4 a~viviD~S~SM~~~---------------D~~p~Rl~~ak~a~~~li~~~~~~~~---~~~vg~v~~~~~~~~~~~~~~ 65 (192)
T 2x5n_A 4 ATMILIDNSEWMING---------------DYIPTRFEAQKDTVHMIFNQKINDNP---ENMCGLMTIGDNSPQVLSTLT 65 (192)
T ss_dssp EEEEEECCSGGGGCT---------------TSSSCHHHHHHHHHHHHHHHHHHHCT---TCEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEEECCHHHCCC---------------CCCCCHHHHHHHHHHHHHHHHHHCCC---CCEEEEEEECCCCCCCCCCCC
T ss_conf 999999898554378---------------98978999999999999998764597---774999860576430147884
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 78488999999864046788765388999999861310123345543347767787766624899606867777765348
Q gi|254781110|r 271 WGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVNT 350 (420)
Q Consensus 271 ~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~~ 350 (420)
.+.......++. ..++|+|+...|+..|+..|... ......+.+++++||..+... ...
T Consensus 66 ~~~~~~~~~i~~---l~~~G~T~l~~al~~A~~~l~~~----------------~~~~~~~~iil~tdg~~~~~~--~~~ 124 (192)
T 2x5n_A 66 RDYGKFLSAMHD---LPVRGNAKFGDGIQIAQLALKHR----------------ENKIQRQRIVAFVGSPIVEDE--KNL 124 (192)
T ss_dssp SCHHHHHHHHTT---CCCCSCCCHHHHHHHHHHHHHTC----------------SCTTSEEEEEEEECSCCSSCH--HHH
T ss_pred HHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHHHH----------------HHCCCCEEEEEEECCCCCCCH--HHH
T ss_conf 089999987402---34468765227999999999862----------------110465069999688975306--789
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
Q ss_conf 9999999978987999995489778999998
Q gi|254781110|r 351 IKICDKAKENFIKIVTISINASPNGQRLLKT 381 (420)
Q Consensus 351 ~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~ 381 (420)
...++.+|+.||+||+||||.+.+... |+.
T Consensus 125 ~~~a~~~~~~~i~i~~Ig~G~~~~~~~-l~~ 154 (192)
T 2x5n_A 125 IRLAKRMKKNNVAIDIIHIGELQNESA-LQH 154 (192)
T ss_dssp HHHHHHHHHTTEEEEEEEESCC---CH-HHH
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCHHH-HHH
T ss_conf 999998513575079999717678799-999