HHsearch results for GI: 254781110 and protein with PDBid: 3fcs_B
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, alternative splicing, cell adhesion, disease mutation, glycoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.46 E-value=0.00093 Score=41.58 Aligned_cols=127 Identities=10% Similarity=0.066 Sum_probs=69.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 3124457784889999998640467887653889999998613-----10123345543347767787766624899606
Q gi|254781110|r 264 EKNIEPSWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILT-----SDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTD 338 (420)
Q Consensus 264 ~~~~~lt~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~-----~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TD 338 (420)
....+||.+...+.+.+++.. .+|+-..++|-.-|..... =+| ++..+|++|+.||
T Consensus 191 ~~~~~lt~~~~~f~~~v~~~~---~s~n~d~pe~~~dal~q~~vc~~~igw----------------r~~~~~~~v~~tD 251 (690)
T 3fcs_B 191 KHVLTLTDQVTRFNEEVKKQS---VSRNRDAPEGGFDAIMQATVCDEKIGW----------------RNDASHLLVFTTD 251 (690)
T ss_dssp EEEEEEESCHHHHHHHHTTCC---CCCCSSSSBCHHHHHHHHHHCHHHHTC----------------CSSSEEEEEEEES
T ss_pred EEECCCCCCHHHHHHHHHHEE---CCCCCCCCCHHHHHHHHHHHCCCCCCC----------------CCCCEEEEEEEEC
T ss_conf 465456667899999875255---116877875046678776523122356----------------7897699999806
Q ss_pred CCCCCC------------------------C-----CCCHHHHHHHHHHHCCCE-EEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 867777------------------------7-----653489999999978987-9999954897789999986218982
Q gi|254781110|r 339 GENNNF------------------------K-----SNVNTIKICDKAKENFIK-IVTISINASPNGQRLLKTCVSSPEY 388 (420)
Q Consensus 339 G~~~~~------------------------~-----~~~~~~~~c~~~k~~gi~-i~tIgf~~~~~~~~~l~~cas~~~~ 388 (420)
.-.+.. . .......+.+++++++|. ||.|.-.....-+.|-+.-. ...-
T Consensus 252 ~~~H~agDg~l~gi~~pnd~~chl~~~~~y~~~~~~dyPs~~q~~~~l~~~~i~~ifavt~~~~~~y~~l~~~~~-~~~~ 330 (690)
T 3fcs_B 252 AKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIP-GTTV 330 (690)
T ss_dssp SCBCCTTGGGGGTCCSCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEGGGHHHHHHHHHHST-TCEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCC-CCEE
T ss_conf 731125665423563167761140798852556767789999999999872967999976654006899997548-7526
Q ss_pred EEEECCHH----HHHHHHHHHHHHHH
Q ss_conf 79817989----99999999998742
Q gi|254781110|r 389 HYNVVNAD----SLIHVFQNISQLMV 410 (420)
Q Consensus 389 yf~a~~~~----~L~~aF~~Ia~~I~ 410 (420)
.-.+.+.. =|.++|++|+..|.
T Consensus 331 ~~l~~dssnv~~li~~~y~~~~s~v~ 356 (690)
T 3fcs_B 331 GVLSMDSSNVLQLIVDAYGKIRSKVE 356 (690)
T ss_dssp EEECTTCTTHHHHHHHHHHHHTTCEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHCEEE
T ss_conf 87057861599999999987526467