HHsearch results for GI: 254781110 and protein with PDBid: 3ibs_A
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for structural genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.5e-13 Score=105.37 Aligned_cols=172 Identities=16% Similarity=0.202 Sum_probs=130.6
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
.++.+++|+|+||.... ...+|++.++.++..+++.+. ..+++++.|++......+++
T Consensus 12 ~divlvvD~SgSM~~~D---------------~~~~R~~~ak~~~~~~l~~~~-------~~rvglv~F~~~~~~~~~~t 69 (218)
T 3ibs_A 12 VEVIIALDISNSMLAQD---------------VQPSRLEKAKRLISRLVDELD-------NDKVGMIVFAGDAFTQLPIT 69 (218)
T ss_dssp CEEEEEEECSGGGGCCS---------------SSSCHHHHHHHHHHHHHHTCS-------SCEEEEEEESSSEEEEEEEE
T ss_pred CEEEEEEECCCCCCCCC---------------CCCCHHHHHHHHHHHHHHHCC-------CCEEEEEEECCCCCCCCCCC
T ss_conf 58999997985778877---------------784899999999999995099-------97699999768442011243
Q ss_pred CCHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCH
Q ss_conf 784889999998640-4678876538899999986131012334554334776778776662489960686777776534
Q gi|254781110|r 271 WGTEKVRQYVTRDMD-SLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVN 349 (420)
Q Consensus 271 ~~~~~~~~~i~~~~~-~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~ 349 (420)
.+.......+..+.. ..+.|+|++..++.++...|.+ .+...|++||+|||+++...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~gT~~~~al~~a~~~l~~------------------~~~~~~~iillSDG~~~~~~---- 127 (218)
T 3ibs_A 70 SDYISAKMFLESISPSLISKQGTAIGEAINLATRSFTP------------------QEGVGRAIIVITDGENHEGG---- 127 (218)
T ss_dssp SCHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCS------------------CSSCCEEEEEEECCTTCCSC----
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH------------------HCCCCCEEEEECCCCCCCCC----
T ss_conf 06778888887522145668996378999999987412------------------02677679996589988761----
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCC------------------------HHHHHHHHHC-CCCCEEEECCHHHHHHHHHH
Q ss_conf 8999999997898799999548977------------------------8999998621-89827981798999999999
Q gi|254781110|r 350 TIKICDKAKENFIKIVTISINASPN------------------------GQRLLKTCVS-SPEYHYNVVNADSLIHVFQN 404 (420)
Q Consensus 350 ~~~~c~~~k~~gi~i~tIgf~~~~~------------------------~~~~l~~cas-~~~~yf~a~~~~~L~~aF~~ 404 (420)
.......++..++.+++|+++.+.. ...+|+..|. ++|.||.+.+.+++.++|..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L~~iA~~tgG~y~~~~~~~~~~~~i~~ 207 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQ 207 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEEEEEECSSSHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 38999999876987999986268786211226775221467762433269999999999649189995287999999999
Q ss_pred -HH
Q ss_conf -99
Q gi|254781110|r 405 -IS 406 (420)
Q Consensus 405 -Ia 406 (420)
|.
T Consensus 208 ~I~ 210 (218)
T 3ibs_A 208 EIS 210 (218)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 997