HHSEARCH alignment of GI: 254781110 and SCOP domain: d1atza_

Alignment
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56  E-value=1.3e-13  Score=104.29  Aligned_cols=176  Identities=13%  Similarity=0.123  Sum_probs=129.4

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf             43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r  190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP  269 (420)
Q Consensus       190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  269 (420)
                      +.|+.|++|.|++|.                    ...++..+..+..+++.+..   ..+..|++++.|++......+|
T Consensus         2 PlDivfliD~S~s~~--------------------~~~f~~~k~~v~~~i~~~~i---~~~~~rv~vv~f~~~~~~~~~l   58 (184)
T d1atza_           2 PLDVILLLDGSSSFP--------------------ASYFDEMKSFAKAFISKANI---GPRLTQVSVLQYGSITTIDVPW   58 (184)
T ss_dssp             CEEEEEEEECSSSSC--------------------HHHHHHHHHHHHHHHHHSCB---STTSEEEEEEEESSSEEEEECT
T ss_pred             CEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCC---CCCCCEEEEEEEECCCEEECCC
T ss_conf             668999994889988--------------------79999999999999996587---9887589999984221155155


Q ss_pred             C--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf             7--78488999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r  270 S--WGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN  347 (420)
Q Consensus       270 t--~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~  347 (420)
                      .  .+...+.+.++.+.  ..+|+|+...++..+.+.+.....+             ..++.+|++|++|||..+.    
T Consensus        59 ~~~~~~~~l~~~i~~l~--~~gg~t~~~~al~~~~~~~~~~~~g-------------~R~~~~kvvvlltdg~~~d----  119 (184)
T d1atza_          59 NVVPEKAHLLSLVDVMQ--REGGPSQIGDALGFAVRYLTSEMHG-------------ARPGASKAVVILVTDVSVD----  119 (184)
T ss_dssp             TCCCCHHHHHHHHHTCC--CCCCCCCHHHHHHHHHHHHHSCCTT-------------CCTTSEEEEEEEECSCCSS----
T ss_pred             CCCCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHCC-------------CCCCCCEEEEEEEECCCCC----
T ss_conf             45663999999987301--0110001024666778876324317-------------8889815999998067653----


Q ss_pred             CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             348999999997898799999548977899999862189--827981798999999999998742
Q gi|254781110|r  348 VNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMV  410 (420)
Q Consensus       348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~  410 (420)
                       ......+.+|+.||+||+||+|.+.+.. .|+.+|+.+  .+.|.+.+.++|...- +|.+++.
T Consensus       120 -~~~~~a~~lk~~gi~v~~igiG~~~~~~-~L~~ias~~~~~~~~~~~~~~~L~~~~-~l~~~~~  181 (184)
T d1atza_         120 -SVDAAADAARSNRVTVFPIGIGDRYDAA-QLRILAGPAGDSNVVKLQRIEDLPTMV-TLGNSFL  181 (184)
T ss_dssp             -CCHHHHHHHHHTTEEEEEEEESSSSCHH-HHHHHTGGGGGGGCEEESSTTHHHHHH-HSCSHHH
T ss_pred             -HHHHHHHHHHHCCCEEEEEEECCCCCHH-HHHHHHCCCCCCCEEEECCHHHHHHHH-HHHHHHH
T ss_conf             -0668999999759589999958859999-999985788856389937988888899-9999998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: von Willebrand factor A3 domain, vWA3
species: Human (Homo sapiens) [TaxId: 9606]