HHSEARCH alignment of GI: 254781110 and SCOP domain: d1ijba_

Alignment
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55  E-value=6.8e-13  Score=99.51  Aligned_cols=181  Identities=11%  Similarity=0.157  Sum_probs=133.0

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             44320122102232422335787666675346766530678899989999851046787655430223204876431244
Q gi|254781110|r  189 PIFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIE  268 (420)
Q Consensus       189 ~~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (420)
                      ...|+.|++|.|++|.                    ...+...+..+..+++.+..   ..+..|+++..|++......+
T Consensus        12 ~~~Dl~fvlD~S~S~~--------------------~~~f~~~k~fv~~~i~~l~~---~~~~~rvavv~y~~~~~~~~~   68 (202)
T d1ijba_          12 RLLDLVFLLDGSSRLS--------------------EAEFEVLKAFVVDMMERLRV---SQKWVRVAVVEYHDGSHAYIG   68 (202)
T ss_dssp             SCEEEEEEEECBTTSC--------------------HHHHHHHHHHHHHHHHTBCB---STTSEEEEEEEESSSEEEEEC
T ss_pred             CCEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHCC---CCCCCEEEEEEEECCEEEECC
T ss_conf             8703899996979988--------------------78999999999999997325---888737999997423035227


Q ss_pred             CCC--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf             577--848899999986404678876538899999986131012334554334776778776662489960686777776
Q gi|254781110|r  269 PSW--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKS  346 (420)
Q Consensus       269 lt~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~  346 (420)
                      |+.  +...+...++.+... .++.|+...+|.++.+.+...               ..+++.+|++|++|||.......
T Consensus        69 l~~~~~~~~l~~~i~~l~~~-~g~~~~~~~al~~~~~~~~~~---------------~~r~~~~k~vivitdg~~~~~~~  132 (202)
T d1ijba_          69 LKDRKRPSELRRIASQVKYA-GSQVASTSEVLKYTLFQIFSK---------------IDRPEASRIALLLMASQEPQRMS  132 (202)
T ss_dssp             TTCCCCHHHHHHHHHTCCCC-CBSCCCHHHHHHHHHHHTSSS---------------CSCTTSEEEEEEEECCCCCGGGC
T ss_pred             CCCCCHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHH---------------CCCCCCCCEEEEECCCCCCCCCC
T ss_conf             76520699999999866555-200100999999999976552---------------04777751578853468886421


Q ss_pred             CCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCC--CCCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             534899999999789879999954897789999986218--9827981798999999999998742
Q gi|254781110|r  347 NVNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSS--PEYHYNVVNADSLIHVFQNISQLMV  410 (420)
Q Consensus       347 ~~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~--~~~yf~a~~~~~L~~aF~~Ia~~I~  410 (420)
                       ......++.+|+.||+||+||+|...+.. .|+..|+.  ++++|.+.+.++|.+.++.|.+.|-
T Consensus       133 -~~~~~~~~~l~~~gv~i~~Vgig~~~~~~-~L~~ia~~~~~~~~~~~~~~~~L~~~~~~i~~~iC  196 (202)
T d1ijba_         133 -RNFVRYVQGLKKKKVIVIPVGIGPHANLK-QIRLIEKQAPENKAFVLSSVDELEQQRDEIVSYLC  196 (202)
T ss_dssp             -TTHHHHHHHHHHTTEEEEEEEESTTSCHH-HHHHHHHHCTTCCCEEESSGGGHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHCCCEEEEEEECCCCCHH-HHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHC
T ss_conf             -68999999999859968999857857999-99998518996768995899999999999999873


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: von Willebrand factor A1 domain, vWA1
species: Human (Homo sapiens) [TaxId: 9606]