HHSEARCH alignment of GI: 254781110 and SCOP domain: d1tyeb2

Alignment
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31  E-value=5.9e-06  Score=54.34  Aligned_cols=176  Identities=14%  Similarity=0.106  Sum_probs=95.8

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-----
Q ss_conf             432012210223242233578766667534676653067889998999985104678765543022320487643-----
Q gi|254781110|r  190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVE-----  264 (420)
Q Consensus       190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  264 (420)
                      +.|+.|+.|.++||..                     .++.++..+..+++.+....   ...|+++..|.+...     
T Consensus         5 PvDl~Fv~D~TgSM~~---------------------~i~~vk~~i~~i~~~l~~~~---~~~r~g~~~f~D~~~~p~~~   60 (248)
T d1tyeb2           5 PVDIYYLMDLSYSMKD---------------------DLWSIQNLGTKLATQMRKLT---SNLRIGFGAFVDKPVSPYMY   60 (248)
T ss_dssp             CEEEEEEEECSGGGGG---------------------GHHHHHHHHHHHHHHHHHHC---SCEEEEEEEECCCSSTTTSC
T ss_pred             CEEEEEEEECCCCHHH---------------------HHHHHHHHHHHHHHHHHHHC---CCCEEEEEEEEECCCCCCCC
T ss_conf             8048999978708799---------------------99999999999999998428---57549889877355676422


Q ss_pred             -------------------------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC-----CCCCCCCC
Q ss_conf             -------------------------124457784889999998640467887653889999998613-----10123345
Q gi|254781110|r  265 -------------------------KNIEPSWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILT-----SDKKRSFF  314 (420)
Q Consensus       265 -------------------------~~~~lt~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~-----~~~~~~~~  314 (420)
                                               ...++|.+...+...++.+.   +.||...+++...|.....     -+|     
T Consensus        61 ~~~~~~~~~p~~~~~~~~~~~f~~~~~~~~t~d~~~f~~~l~~~~---~~GggD~pE~~~~Al~~a~~~~~~i~W-----  132 (248)
T d1tyeb2          61 ISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQS---VSRNRDAPEGGFDAIMQATVCDEKIGW-----  132 (248)
T ss_dssp             CCSGGGGTCGGGGGTSCCCCCCSEEEEEEEESCHHHHHHHHTTCC---CCCCSSSSBCHHHHHHHHHHCHHHHTC-----
T ss_pred             CCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHEE---CCCCCCCCCHHHHHHHHHHHHHHHCCC-----
T ss_conf             360543168653446554566443103777779999999985011---316889750389999999987630798-----


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC-----------------------------CCHHHHHHHHHHHCCCEEE
Q ss_conf             54334776778776662489960686777776-----------------------------5348999999997898799
Q gi|254781110|r  315 TNFFRQGVKIPSLPFQKFIIFLTDGENNNFKS-----------------------------NVNTIKICDKAKENFIKIV  365 (420)
Q Consensus       315 ~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~-----------------------------~~~~~~~c~~~k~~gi~i~  365 (420)
                                 +++.+|++|++||+-......                             ......+++.++.++|.++
T Consensus       133 -----------r~~a~r~viliTDA~~H~~~d~~l~g~~~~~d~~~~~~~~~~~~~~~~~dyps~~ql~~~l~~~~i~~i  201 (248)
T d1tyeb2         133 -----------RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLI  201 (248)
T ss_dssp             -----------CTTSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTSBBGGGGTSCCCCHHHHHHHHHHTTEEEE
T ss_pred             -----------CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE
T ss_conf             -----------888608999988787554531233233456777554677785356543457888999999998295799


Q ss_pred             EEEECCCCCHHHHHHHHH-CCCCCEEEECCHHHHHHHHHHHHHHHHCC
Q ss_conf             999548977899999862-18982798179899999999999874202
Q gi|254781110|r  366 TISINASPNGQRLLKTCV-SSPEYHYNVVNADSLIHVFQNISQLMVHR  412 (420)
Q Consensus       366 tIgf~~~~~~~~~l~~ca-s~~~~yf~a~~~~~L~~aF~~Ia~~I~~l  412 (420)
                      .+   ...+...+.+.-+ -.+|.++..-+. +-..+.+.|-+...++
T Consensus       202 fa---vt~~~~~~Y~~l~~~~~g~~~~~l~~-dssNi~~lI~~~y~~i  245 (248)
T d1tyeb2         202 FA---VTENVVNLYQNYSELIPGTTVGVLSM-DSSNVLQLIVDAYGKI  245 (248)
T ss_dssp             EE---ECGGGHHHHHHHHHTSTTCEEEECSS-CCHHHHHHHHHHHHTC
T ss_pred             EE---ECCHHHHHHHHHHHHCCCCEEEEECC-CCHHHHHHHHHHHHHH
T ss_conf             99---88315689999998569857987055-3444999999999987


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Integrin beta A domain
species: Human (Homo sapiens) [TaxId: 9606]