Query gi|254781110|ref|YP_003065523.1| von Willebrand factor type A [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 420
No_of_seqs 153 out of 724
Neff 9.9
Searched_HMMs 13730
Date Wed Jun 1 11:34:38 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781110.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1shux_ c.62.1.1 (X:) Capillar 99.7 9.4E-16 6.9E-20 118.1 17.7 175 190-409 5-180 (181)
2 d1q0pa_ c.62.1.1 (A:) Compleme 99.7 9.4E-16 6.8E-20 118.1 15.6 188 191-412 2-208 (209)
3 d1pt6a_ c.62.1.1 (A:) Integrin 99.6 2.1E-14 1.6E-18 109.3 15.6 178 191-410 2-191 (192)
4 d1v7pc_ c.62.1.1 (C:) Integrin 99.6 1.4E-13 1E-17 104.0 17.5 179 191-411 2-192 (193)
5 d1n3ya_ c.62.1.1 (A:) Integrin 99.6 1.4E-14 1E-18 110.5 12.0 179 191-411 3-188 (189)
6 d1atza_ c.62.1.1 (A:) von Will 99.6 1.3E-13 9.1E-18 104.3 15.2 176 190-410 2-181 (184)
7 d1ijba_ c.62.1.1 (A:) von Will 99.6 6.8E-13 4.9E-17 99.5 18.6 181 189-410 12-196 (202)
8 d1mf7a_ c.62.1.1 (A:) Integrin 99.5 7.7E-14 5.6E-18 105.7 10.6 179 190-410 5-190 (194)
9 d1mjna_ c.62.1.1 (A:) Integrin 99.3 4.3E-12 3.1E-16 94.3 9.4 171 190-409 2-179 (179)
10 d1jeya2 c.62.1.3 (A:34-253) Ku 99.1 5.6E-10 4.1E-14 80.5 10.2 183 193-407 5-215 (220)
11 d1jeyb2 c.62.1.4 (B:6-241) Ku8 99.0 6E-09 4.3E-13 73.8 13.9 149 192-374 4-166 (236)
12 d1tyeb2 c.62.1.1 (B:107-354) I 98.3 5.9E-06 4.3E-10 54.3 11.5 176 190-412 5-245 (248)
13 d1yvra2 c.62.1.5 (A:364-537) 6 98.2 1.7E-05 1.2E-09 51.3 12.3 133 192-372 7-141 (174)
14 d1geea_ c.2.1.2 (A:) Glucose d 36.4 8.9 0.00065 14.1 7.1 23 350-372 169-191 (261)
15 d1yo6a1 c.2.1.2 (A:1-250) Puta 30.2 11 0.00081 13.5 7.2 21 351-371 184-204 (250)
16 d1pd0a3 c.62.1.2 (A:301-552) S 25.2 14 0.00099 12.9 18.5 104 270-394 97-228 (252)
17 d1gega_ c.2.1.2 (A:) meso-2,3- 21.7 16 0.0012 12.5 8.0 25 350-374 162-186 (255)
18 d2c1ia1 c.6.2.3 (A:268-463) Pe 21.1 16 0.0012 12.4 2.4 52 331-393 144-195 (196)
19 d2c71a1 c.6.2.3 (A:480-683) Xy 20.7 17 0.0012 12.4 2.5 37 331-367 145-181 (204)
20 d1x1ta1 c.2.1.2 (A:1-260) D(-) 20.7 17 0.0012 12.4 5.5 23 350-372 166-188 (260)
No 1
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=9.4e-16 Score=118.11 Aligned_cols=175 Identities=15% Similarity=0.129 Sum_probs=137.2
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP 269 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (420)
..|+.|++|.|+||.. .+...++.+..++..+. ....|++++.|++......++
T Consensus 5 ~~Div~llD~S~Sm~~---------------------~~~~~k~~~~~~~~~~~-----~~~~rvglv~fs~~~~~~~~l 58 (181)
T d1shux_ 5 AFDLYFVLDKSGSVAN---------------------NWIEIYNFVQQLAERFV-----SPEMRLSFIVFSSQATIILPL 58 (181)
T ss_dssp CEEEEEEEECSGGGGG---------------------GHHHHHHHHHHHHHHCC-----CTTEEEEEEEESSSEEEEEEE
T ss_pred CEEEEEEEECCCCCCC---------------------CHHHHHHHHHHHHHHHC-----CCCCEEEEEEEECCEEEEEEE
T ss_conf 6589999947888533---------------------79999999999999726-----899789999960423799972
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCH
Q ss_conf 77848899999986404678876538899999986131012334554334776778776662489960686777776534
Q gi|254781110|r 270 SWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVN 349 (420)
Q Consensus 270 t~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~ 349 (420)
+.+.......+..+....+.|+|+.+.||.++.+.+.... ..+.+|++|++|||..+... ...
T Consensus 59 ~~~~~~~~~~l~~l~~~~~~g~t~~~~al~~~~~~~~~~~----------------~~~~~~~ivliTDG~~~~~~-~~~ 121 (181)
T d1shux_ 59 TGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAG----------------GLKTSSIIIALTDGKLDGLV-PSY 121 (181)
T ss_dssp ECCHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHT----------------GGGSCEEEEEEECCCCCTTH-HHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC----------------CCCCCEEEEEECCCCCCCCC-CHH
T ss_conf 4888999997653222367785068999999998763003----------------57875289992478778886-389
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECC-HHHHHHHHHHHHHHH
Q ss_conf 899999999789879999954897789999986218982798179-899999999999874
Q gi|254781110|r 350 TIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSPEYHYNVVN-ADSLIHVFQNISQLM 409 (420)
Q Consensus 350 ~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~~~yf~a~~-~~~L~~aF~~Ia~~I 409 (420)
....++.+|+.||.||+||+|. .+ ...|+..|++|+++|.+.+ .++|.+.++.|.+.|
T Consensus 122 ~~~~~~~~k~~gv~v~~vgig~-~~-~~~L~~ia~~~~~~~~~~~~~~~L~~~~~~i~~~i 180 (181)
T d1shux_ 122 AEKEAKISRSLGASVYCVGVLD-FE-QAQLERIADSKEQVFPVKGGFQALKGIINSILAQS 180 (181)
T ss_dssp HHHHHHHHHHTTCEEEEEECSS-CC-HHHHHHHSSSGGGEEESSSTTHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHCCCEEEEEEECC-CC-HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf 9999999997898899999685-48-99999984899965994599999999999998633
No 2
>d1q0pa_ c.62.1.1 (A:) Complement factor B domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=9.4e-16 Score=118.13 Aligned_cols=188 Identities=16% Similarity=0.189 Sum_probs=134.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
+|+.|++|.|+||. ..+++.++.++..+++.+... ....|++++.|++......+++
T Consensus 2 lDivfvlD~SgSm~--------------------~~~~~~~k~~~~~li~~l~~~---~~~~rv~lv~f~~~~~~~~~l~ 58 (209)
T d1q0pa_ 2 MNIYLVLDGSDSIG--------------------ASNFTGAKKSLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVS 58 (209)
T ss_dssp EEEEEEEECSTTTC--------------------HHHHHHHHHHHHHHHHHHHTT---TCCCEEEEEEESSSEEEEECTT
T ss_pred CCEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCCC---CCCCEEEEEEECCCEEEEECCC
T ss_conf 07799996889988--------------------599999999999999961047---8876799999658505886476
Q ss_pred CCHH----HHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 7848----899999986404--6788765388999999861310123345543347767787766624899606867777
Q gi|254781110|r 271 WGTE----KVRQYVTRDMDS--LILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNF 344 (420)
Q Consensus 271 ~~~~----~~~~~i~~~~~~--~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~ 344 (420)
.... .+.+.++.+... ..+|+|++..||.++...+...... .....++.+|++|++|||..+.+
T Consensus 59 ~~~~~~~~~l~~~i~~i~~~~~~~~g~t~~~~al~~a~~~~~~~~~~----------~~~~~~~~~kvvvl~TDG~~~~~ 128 (209)
T d1q0pa_ 59 EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV----------PPEGWNRTRHVIILMTDGLHNMG 128 (209)
T ss_dssp SGGGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSS----------CCTTGGGCEEEEEEEECSCCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC----------CCCCCCCCCEEEEEECCCCCCCC
T ss_conf 51166789999999972101366788854989999999999752224----------76566777518999757876678
Q ss_pred CCCCHHHHH----------HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCC---CCCEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 765348999----------99999789879999954897789999986218---98279817989999999999987420
Q gi|254781110|r 345 KSNVNTIKI----------CDKAKENFIKIVTISINASPNGQRLLKTCVSS---PEYHYNVVNADSLIHVFQNISQLMVH 411 (420)
Q Consensus 345 ~~~~~~~~~----------c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~---~~~yf~a~~~~~L~~aF~~Ia~~I~~ 411 (420)
......... +..++..||.||+||+|.+.+. ..|+..|+. +++||.+.+.++|.++|++|..+...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~gi~i~~vgvg~~~~~-~~L~~iAs~~~~~~~~f~~~~~~~L~~~~~~ii~~~~s 207 (209)
T d1q0pa_ 129 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQ-VNINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQS 207 (209)
T ss_dssp SCTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCH-HHHHHHSCCCTTCCCEEETTC-----------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH-HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 98589999999854437899999866995598427766899-99999974989971599938999999999999885257
Q ss_pred C
Q ss_conf 2
Q gi|254781110|r 412 R 412 (420)
Q Consensus 412 l 412 (420)
+
T Consensus 208 ~ 208 (209)
T d1q0pa_ 208 L 208 (209)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 3
>d1pt6a_ c.62.1.1 (A:) Integrin alpha1-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=2.1e-14 Score=109.28 Aligned_cols=178 Identities=19% Similarity=0.236 Sum_probs=128.3
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
.|+.|++|.|+||. .++..++.+..+++.+. ..++..|++++.|++......+|+
T Consensus 2 ~DivfvlD~S~S~~----------------------~~~~~k~f~~~~i~~~~---i~~~~~rv~vv~fs~~~~~~~~l~ 56 (192)
T d1pt6a_ 2 LDIVIVLDGSNSIY----------------------PWDSVTAFLNDLLKRMD---IGPKQTQVGIVQYGENVTHEFNLN 56 (192)
T ss_dssp EEEEEEEECCTTCC----------------------CHHHHHHHHHHHHTTSC---BSTTSBEEEEEEESSSEEEEECTT
T ss_pred EEEEEEEECCCCCC----------------------CHHHHHHHHHHHHHHHC---CCCCCCEEEEEEEECCEEEEEECC
T ss_conf 48999997988877----------------------79999999999999825---488873799999841278997277
Q ss_pred C--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 7--84889999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r 271 W--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV 348 (420)
Q Consensus 271 ~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~ 348 (420)
. +...+...++.+.. ..+++++.+.++.++...+.....+ ..++.+|++|++|||..+. +.
T Consensus 57 ~~~~~~~~~~~i~~~~~-~~g~~~~~~~al~~~~~~~~~~~~g-------------~R~~~~kviillTDG~~~d---~~ 119 (192)
T d1pt6a_ 57 KYSSTEEVLVAAKKIVQ-RGGRQTMTALGTDTARKEAFTEARG-------------ARRGVKKVMVIVTDGESHD---NH 119 (192)
T ss_dssp TCSSHHHHHHHHHTCCC-CCCSSCCHHHHHHHHHHTTTSGGGT-------------CCTTCEEEEEEEESSCCSC---SH
T ss_pred CCHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHCCCCC-------------CCCCCCEEEEEEECCCCCC---CH
T ss_conf 64046899998865554-4221101578987777763012358-------------9888615899996688776---30
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCC--------HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 48999999997898799999548977--------899999862189--827981798999999999998742
Q gi|254781110|r 349 NTIKICDKAKENFIKIVTISINASPN--------GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMV 410 (420)
Q Consensus 349 ~~~~~c~~~k~~gi~i~tIgf~~~~~--------~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~ 410 (420)
.....++.+|+.||+||+||+|...+ ..+.|+..|+.| .|+|.+++..+|.++++.|.+.|-
T Consensus 120 ~~~~~a~~lk~~gi~v~~igvg~~~~~~~~~~~~~~~~L~~IAs~p~~~~~f~v~d~~~L~~i~~~i~~~I~ 191 (192)
T d1pt6a_ 120 RLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKTLGERIF 191 (192)
T ss_dssp HHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESSGGGGGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHC
T ss_conf 269999999977996999997055554543431369999998669985508983899999999999988852
No 4
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.4e-13 Score=103.99 Aligned_cols=179 Identities=20% Similarity=0.200 Sum_probs=132.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
.|+.|++|.|+||. .++..++.+..++..+.. .++..|+++..|++......+|+
T Consensus 2 ~DivfvlD~S~Sv~----------------------~f~~~k~f~~~ii~~~~i---~~~~~rv~vv~fs~~~~~~~~l~ 56 (193)
T d1v7pc_ 2 IDVVVVCDESNSIY----------------------PWDAVKNFLEKFVQGLDI---GPTKTQVGLIQYANNPRVVFNLN 56 (193)
T ss_dssp EEEEEEEECCTTCC----------------------CHHHHHHHHHHHHHTSCB---STTSEEEEEEEESSSEEEEECTT
T ss_pred EEEEEEEECCCCCC----------------------CHHHHHHHHHHHHHHCCC---CCCCCEEEEEEEECCEEEEECCC
T ss_conf 79999998999873----------------------699999999999997255---88760799998520113550466
Q ss_pred C--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 7--84889999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r 271 W--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV 348 (420)
Q Consensus 271 ~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~ 348 (420)
. +...+...++.+.. ..+|+|+.+.+|.++.+.+..... ...++.+|++|++|||..+.. .
T Consensus 57 ~~~~~~~~~~~i~~~~~-~~g~~t~~~~AL~~a~~~~f~~~~-------------~~R~~~~kvvVllTDG~s~d~---~ 119 (193)
T d1v7pc_ 57 TYKTKEEMIVATSQTSQ-YGGDLTNTFGAIQYARKYAYSAAS-------------GGRRSATKVMVVVTDGESHDG---S 119 (193)
T ss_dssp TCSSHHHHHHHHHHCCC-CCCSCCCHHHHHHHHHHHTTSGGG-------------TCCTTSEEEEEEEESSCCSCG---G
T ss_pred CHHHHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHCCCCCC-------------CCCCCCCEEEEEEECCCCCCC---C
T ss_conf 30367899999874443-225764268899888874146123-------------898887358999956876787---3
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCC--------HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 48999999997898799999548977--------899999862189--8279817989999999999987420
Q gi|254781110|r 349 NTIKICDKAKENFIKIVTISINASPN--------GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMVH 411 (420)
Q Consensus 349 ~~~~~c~~~k~~gi~i~tIgf~~~~~--------~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~~ 411 (420)
.....++.+|+.||++|+||++...+ ....|+..|+.| .|+|.+.+..+|.+..+.|.+.|-+
T Consensus 120 ~~~~~~~~~~~~gv~v~~Igvg~~~~~~~~~~~~~~~~L~~Ias~p~~~~~f~v~d~~~L~~i~~~l~~~Ic~ 192 (193)
T d1v7pc_ 120 MLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKAGTLGEQIFS 192 (193)
T ss_dssp GHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESSSGGGHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf 6899999998689899999967754444444412599999986698710189818999999999999865131
No 5
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.4e-14 Score=110.47 Aligned_cols=179 Identities=15% Similarity=0.152 Sum_probs=129.9
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 32012210223242233578766667534676653067889998999985104678765543022320487643124457
Q gi|254781110|r 191 FLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPS 270 (420)
Q Consensus 191 ~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt 270 (420)
.|+.|++|.|+||. ..++...+..+..+++.+. ....|++++.|++......+|+
T Consensus 3 ~DivfvlD~S~Sm~--------------------~~~~~~~k~~~~~~i~~l~-----~~~~rv~vv~fs~~~~~~~~l~ 57 (189)
T d1n3ya_ 3 QDIVFLIDGSGSIS--------------------SRNFATMMNFVRAVISQFQ-----RPSTQFSLMQFSNKFQTHFTFE 57 (189)
T ss_dssp EEEEEEEECCTTSC--------------------HHHHHHHHHHHHHHHTTSC-----TTTEEEEEEEESSSEEEEECHH
T ss_pred CCEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHC-----CCCCEEEEEEEECCCEEECCCC
T ss_conf 41999996979988--------------------6999999999999999708-----9987899999531210100235
Q ss_pred CCHH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 7848--89999998640467887653889999998613101233455433477677877666248996068677777653
Q gi|254781110|r 271 WGTE--KVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNV 348 (420)
Q Consensus 271 ~~~~--~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~ 348 (420)
...+ ...+.++.+ ...+|+|+...++.++.+.+..... ...++.+|++|++|||..+....
T Consensus 58 ~~~~~~~~~~~i~~~--~~~~g~t~~~~al~~a~~~~f~~~~-------------~~r~~~~kvivllTDG~~~~~~~-- 120 (189)
T d1n3ya_ 58 EFRRSSNPLSLLASV--HQLQGFTYTATAIQNVVHRLFHASY-------------GARRDAAKILIVITDGKKEGDSL-- 120 (189)
T ss_dssp HHHHCSSGGGGGTTC--CCCCSCBCHHHHHHHHHTTTTSGGG-------------TCCTTSEEEEEEEESSCCBSCSS--
T ss_pred CCCCHHHHHHHHHHH--HHHHHHCHHHHHHHHHHHHHHHHHC-------------CCCCCCCEEEEEEECCCCCCCCC--
T ss_conf 400288999998754--3433001389999999999841112-------------78888732799995689888832--
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCC---HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 48999999997898799999548977---899999862189--8279817989999999999987420
Q gi|254781110|r 349 NTIKICDKAKENFIKIVTISINASPN---GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMVH 411 (420)
Q Consensus 349 ~~~~~c~~~k~~gi~i~tIgf~~~~~---~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~~ 411 (420)
....++..+|+.||.||+||++.+.+ ....|+.+|+.| +++|.+++.++|.+.++.|.++|-.
T Consensus 121 ~~~~~~~~~~~~gv~i~~Vgig~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~l~~i~~~i~~~ic~ 188 (189)
T d1n3ya_ 121 DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFA 188 (189)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 39999999998799438983365556633399999996699866089828999999999999975143
No 6
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.3e-13 Score=104.29 Aligned_cols=176 Identities=13% Similarity=0.123 Sum_probs=129.4
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP 269 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (420)
+.|+.|++|.|++|. ...++..+..+..+++.+.. ..+..|++++.|++......+|
T Consensus 2 PlDivfliD~S~s~~--------------------~~~f~~~k~~v~~~i~~~~i---~~~~~rv~vv~f~~~~~~~~~l 58 (184)
T d1atza_ 2 PLDVILLLDGSSSFP--------------------ASYFDEMKSFAKAFISKANI---GPRLTQVSVLQYGSITTIDVPW 58 (184)
T ss_dssp CEEEEEEEECSSSSC--------------------HHHHHHHHHHHHHHHHHSCB---STTSEEEEEEEESSSEEEEECT
T ss_pred CEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCCC---CCCCCEEEEEEEECCCEEECCC
T ss_conf 668999994889988--------------------79999999999999996587---9887589999984221155155
Q ss_pred C--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 7--78488999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r 270 S--WGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN 347 (420)
Q Consensus 270 t--~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~ 347 (420)
. .+...+.+.++.+. ..+|+|+...++..+.+.+.....+ ..++.+|++|++|||..+.
T Consensus 59 ~~~~~~~~l~~~i~~l~--~~gg~t~~~~al~~~~~~~~~~~~g-------------~R~~~~kvvvlltdg~~~d---- 119 (184)
T d1atza_ 59 NVVPEKAHLLSLVDVMQ--REGGPSQIGDALGFAVRYLTSEMHG-------------ARPGASKAVVILVTDVSVD---- 119 (184)
T ss_dssp TCCCCHHHHHHHHHTCC--CCCCCCCHHHHHHHHHHHHHSCCTT-------------CCTTSEEEEEEEECSCCSS----
T ss_pred CCCCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHCC-------------CCCCCCEEEEEEEECCCCC----
T ss_conf 45663999999987301--0110001024666778876324317-------------8889815999998067653----
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 348999999997898799999548977899999862189--827981798999999999998742
Q gi|254781110|r 348 VNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMV 410 (420)
Q Consensus 348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~ 410 (420)
......+.+|+.||+||+||+|.+.+.. .|+.+|+.+ .+.|.+.+.++|...- +|.+++.
T Consensus 120 -~~~~~a~~lk~~gi~v~~igiG~~~~~~-~L~~ias~~~~~~~~~~~~~~~L~~~~-~l~~~~~ 181 (184)
T d1atza_ 120 -SVDAAADAARSNRVTVFPIGIGDRYDAA-QLRILAGPAGDSNVVKLQRIEDLPTMV-TLGNSFL 181 (184)
T ss_dssp -CCHHHHHHHHHTTEEEEEEEESSSSCHH-HHHHHTGGGGGGGCEEESSTTHHHHHH-HSCSHHH
T ss_pred -HHHHHHHHHHHCCCEEEEEEECCCCCHH-HHHHHHCCCCCCCEEEECCHHHHHHHH-HHHHHHH
T ss_conf -0668999999759589999958859999-999985788856389937988888899-9999998
No 7
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=6.8e-13 Score=99.51 Aligned_cols=181 Identities=11% Similarity=0.157 Sum_probs=133.0
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 44320122102232422335787666675346766530678899989999851046787655430223204876431244
Q gi|254781110|r 189 PIFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIE 268 (420)
Q Consensus 189 ~~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (420)
...|+.|++|.|++|. ...+...+..+..+++.+.. ..+..|+++..|++......+
T Consensus 12 ~~~Dl~fvlD~S~S~~--------------------~~~f~~~k~fv~~~i~~l~~---~~~~~rvavv~y~~~~~~~~~ 68 (202)
T d1ijba_ 12 RLLDLVFLLDGSSRLS--------------------EAEFEVLKAFVVDMMERLRV---SQKWVRVAVVEYHDGSHAYIG 68 (202)
T ss_dssp SCEEEEEEEECBTTSC--------------------HHHHHHHHHHHHHHHHTBCB---STTSEEEEEEEESSSEEEEEC
T ss_pred CCEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHCC---CCCCCEEEEEEEECCEEEECC
T ss_conf 8703899996979988--------------------78999999999999997325---888737999997423035227
Q ss_pred CCC--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 577--848899999986404678876538899999986131012334554334776778776662489960686777776
Q gi|254781110|r 269 PSW--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKS 346 (420)
Q Consensus 269 lt~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~ 346 (420)
|+. +...+...++.+... .++.|+...+|.++.+.+... ..+++.+|++|++|||.......
T Consensus 69 l~~~~~~~~l~~~i~~l~~~-~g~~~~~~~al~~~~~~~~~~---------------~~r~~~~k~vivitdg~~~~~~~ 132 (202)
T d1ijba_ 69 LKDRKRPSELRRIASQVKYA-GSQVASTSEVLKYTLFQIFSK---------------IDRPEASRIALLLMASQEPQRMS 132 (202)
T ss_dssp TTCCCCHHHHHHHHHTCCCC-CBSCCCHHHHHHHHHHHTSSS---------------CSCTTSEEEEEEEECCCCCGGGC
T ss_pred CCCCCHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHH---------------CCCCCCCCEEEEECCCCCCCCCC
T ss_conf 76520699999999866555-200100999999999976552---------------04777751578853468886421
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCC--CCCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 534899999999789879999954897789999986218--9827981798999999999998742
Q gi|254781110|r 347 NVNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSS--PEYHYNVVNADSLIHVFQNISQLMV 410 (420)
Q Consensus 347 ~~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~--~~~yf~a~~~~~L~~aF~~Ia~~I~ 410 (420)
......++.+|+.||+||+||+|...+.. .|+..|+. ++++|.+.+.++|.+.++.|.+.|-
T Consensus 133 -~~~~~~~~~l~~~gv~i~~Vgig~~~~~~-~L~~ia~~~~~~~~~~~~~~~~L~~~~~~i~~~iC 196 (202)
T d1ijba_ 133 -RNFVRYVQGLKKKKVIVIPVGIGPHANLK-QIRLIEKQAPENKAFVLSSVDELEQQRDEIVSYLC 196 (202)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEESTTSCHH-HHHHHHHHCTTCCCEEESSGGGHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHCCCEEEEEEECCCCCHH-HHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHC
T ss_conf -68999999999859968999857857999-99998518996768995899999999999999873
No 8
>d1mf7a_ c.62.1.1 (A:) Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=7.7e-14 Score=105.68 Aligned_cols=179 Identities=16% Similarity=0.185 Sum_probs=130.8
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP 269 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (420)
..|+.|++|.|++|. ..++...+..+..+++.+. .+..|++++.|++......+|
T Consensus 5 ~~DivfvlD~S~s~~--------------------~~~~~~~k~f~~~iv~~l~-----~~~~rv~vv~fs~~~~~~~~l 59 (194)
T d1mf7a_ 5 DSDIAFLIDGSGSII--------------------PHDFRRMKEFVSTVMEQLK-----KSKTLFSLMQYSEEFRIHFTF 59 (194)
T ss_dssp CEEEEEEEECCTTSC--------------------HHHHHHHHHHHHHHHHHHC-----CTTEEEEEEEESSSEEEEECH
T ss_pred CEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHCC-----CCCCEEEEEEEECCCEEEEEC
T ss_conf 716999997989988--------------------7999999999999999718-----678369999972240257752
Q ss_pred CC--CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 77--8488999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r 270 SW--GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN 347 (420)
Q Consensus 270 t~--~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~ 347 (420)
+. +..++.+.++.+. ..+|+|....++.++.+.+..... ...+..+|++|++|||..+....
T Consensus 60 ~~~~~~~~~~~~i~~i~--~~~~~t~~~~al~~~~~~~~~~~~-------------~~~~~~~kvvvliTDG~~~~~~~- 123 (194)
T d1mf7a_ 60 KEFQNNPNPRSLVKPIT--QLLGRTHTATGIRKVVRELFNITN-------------GARKNAFKILVVITDGEKFGDPL- 123 (194)
T ss_dssp HHHHHSCCHHHHHTTCC--CCCSCBCHHHHHHHHHHTTTSGGG-------------TCCTTSEEEEEEEESSCCBSCSS-
T ss_pred CCCCCHHHHHHHHHHHH--HHHCCCHHHHHHHHHHHHHHHHHC-------------CCCCCCCEEEEEEECCCCCCCCH-
T ss_conf 66577899999976455--532101577999999999875642-------------57889735999982689899805-
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCC---HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 348999999997898799999548977---899999862189--827981798999999999998742
Q gi|254781110|r 348 VNTIKICDKAKENFIKIVTISINASPN---GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLMV 410 (420)
Q Consensus 348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~---~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I~ 410 (420)
........+|..||+||+||++.... ....|+.+|+.| .++|.+++.++|.+..+.|.+.|-
T Consensus 124 -~~~~~~~~~~~~gv~i~~VGi~~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l~~~i~ 190 (194)
T d1mf7a_ 124 -GYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLREKIF 190 (194)
T ss_dssp -CGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGGGGGGHHHHHHHHH
T ss_pred -HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHC
T ss_conf -5999999999859905998057766652569999999659987719995999999999999988762
No 9
>d1mjna_ c.62.1.1 (A:) Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=4.3e-12 Score=94.29 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=121.5
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 43201221022324223357876666753467665306788999899998510467876554302232048764312445
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEP 269 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (420)
..|+.|++|.|+||. ...+...+..+..+++.+. .+..|++++.|++......+|
T Consensus 2 ~~DivfllD~S~Si~--------------------~~~f~~~k~f~~~~i~~i~-----~~~~rvgvv~fs~~~~~~~~l 56 (179)
T d1mjna_ 2 NVDLVFLFDGSMSLQ--------------------PDEFQKILDFMKDVMKKCS-----NTSYQFAAVQFSTSYKTEFDF 56 (179)
T ss_dssp CEEEEEEEECBTTCC--------------------HHHHHHHHHHHHHHHHHTT-----TSSEEEEEEEESSSEEEEECH
T ss_pred CEEEEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHHHC-----CCCEEEEEEEEEEEEEEEECH
T ss_conf 768999997989989--------------------8999999999999999828-----775289999974234688511
Q ss_pred CCC--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 778--488999999864046788765388999999861310123345543347767787766624899606867777765
Q gi|254781110|r 270 SWG--TEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSN 347 (420)
Q Consensus 270 t~~--~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~ 347 (420)
+.. ...+...+..+. ..+|+|+...+|.++.+.+.....+ .+++.+|++|++|||..+....
T Consensus 57 ~~~~~~~~~~~~i~~i~--~~~g~t~~~~AL~~~~~~~f~~~~g-------------~R~~~~kvvvllTDG~s~d~~~- 120 (179)
T d1mjna_ 57 SDYVKRKDPDALLKHVK--HMLLLTNTFGAINYVATEVFREELG-------------ARPDATKVLIIITDGEATDSGN- 120 (179)
T ss_dssp HHHHHHCCHHHHHTTCC--CCCBCCCHHHHHHHHHHHTSSGGGT-------------CCTTSEEEEEEEESSCCSSCSC-
T ss_pred HHCCCHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHCHHCC-------------CCCCCCEEEEEEECCCCCCCCH-
T ss_conf 43063688999986331--0158634999999999987161018-------------8999974999997899865406-
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCC---HHHHHHHHHCCC--CCEEEECCHHHHHHHHHHHHHHH
Q ss_conf 348999999997898799999548977---899999862189--82798179899999999999874
Q gi|254781110|r 348 VNTIKICDKAKENFIKIVTISINASPN---GQRLLKTCVSSP--EYHYNVVNADSLIHVFQNISQLM 409 (420)
Q Consensus 348 ~~~~~~c~~~k~~gi~i~tIgf~~~~~---~~~~l~~cas~~--~~yf~a~~~~~L~~aF~~Ia~~I 409 (420)
..+..|+.+|+||++.... ....|+..|+.| .|+|.+++-++|.+.+++|.+.|
T Consensus 121 --------~~~~~~i~~~~igvg~~~~~~~~~~~L~~ias~p~~~~~~~~~~~~~L~~i~~~l~~~I 179 (179)
T d1mjna_ 121 --------IDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLCTELQKKI 179 (179)
T ss_dssp --------CGGGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGGSCCHHHHHHHHC
T ss_pred --------HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC
T ss_conf --------99974174406985244564004999999857996223997499999999999998439
No 10
>d1jeya2 c.62.1.3 (A:34-253) Ku70 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=5.6e-10 Score=80.51 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=110.1
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC------
Q ss_conf 01221022324223357876666753467665306788999899998510467876554302232048764312------
Q gi|254781110|r 193 IELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKN------ 266 (420)
Q Consensus 193 ~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 266 (420)
+.|++|.|+||.....+ ...+++..+..++..++..+-... ...++|++.|++.....
T Consensus 5 ivf~ID~S~SM~~~d~~-------------~~~s~~~~~~~~~~~~~~~~i~~~---~~d~vglv~f~t~~~~~~~~~~~ 68 (220)
T d1jeya2 5 LIFLVDASKAMFESQSE-------------DELTPFDMSIQCIQSVYISKIISS---DRDLLAVVFYGTEKDKNSVNFKN 68 (220)
T ss_dssp EEEEEECSGGGGCCCSS-------------SSCCHHHHHHHHHHHHHHHHHHTT---CCCEEEEEEESCSSCBSTTCCTT
T ss_pred EEEEEECCCCCCCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHCC---CCCEEEEEEECCCCCCCCCCCCC
T ss_conf 99999898030745567-------------887789999999999999985079---98779999954666668776530
Q ss_pred ----CCCCCCHHHHHHHHH---------HH-HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf ----445778488999999---------86-4046788765388999999861310123345543347767787766624
Q gi|254781110|r 267 ----IEPSWGTEKVRQYVT---------RD-MDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKF 332 (420)
Q Consensus 267 ----~~lt~~~~~~~~~i~---------~~-~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~ 332 (420)
.++..........+. .. ......|+|++..+|..+.+.|.... .....|.
T Consensus 69 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~al~~a~~~~~~~~----------------~~~~~k~ 132 (220)
T d1jeya2 69 IYVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ----------------FKMSHKR 132 (220)
T ss_dssp EEEEEEEECCCHHHHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS----------------SCEEEEE
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC----------------CCCCCCE
T ss_conf 355301347428898766553234444443202467888629999999999987401----------------3457758
Q ss_pred EEEEECCCCCCCCCCCHH---HHHHHHHHHCCCEEEEEEECCCCCH--HHHHH---HHHCCCCCEEEECCHHHHHHHHHH
Q ss_conf 899606867777765348---9999999978987999995489778--99999---862189827981798999999999
Q gi|254781110|r 333 IIFLTDGENNNFKSNVNT---IKICDKAKENFIKIVTISINASPNG--QRLLK---TCVSSPEYHYNVVNADSLIHVFQN 404 (420)
Q Consensus 333 iil~TDG~~~~~~~~~~~---~~~c~~~k~~gi~i~tIgf~~~~~~--~~~l~---~cas~~~~yf~a~~~~~L~~aF~~ 404 (420)
||++|||.++.+...... ...++.+++.||.||+|+++.+.+. ..+.+ ....++...+..+..+.|++.+++
T Consensus 133 IiliTDg~~~~~~~~~~~~~~~~~a~~~~~~gv~i~~i~ig~~~~~d~~~f~~~~l~~~~~~~~~~~~~~~~~l~~l~~~ 212 (220)
T d1jeya2 133 IMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLEDLLRK 212 (220)
T ss_dssp EEEEESCSCTTTTCHHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCCTTTTGGGTCC--------CCCCCBCSHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99980599888885124577999988776306517999837878755116689987211366676106864669999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254781110|r 405 ISQ 407 (420)
Q Consensus 405 Ia~ 407 (420)
|..
T Consensus 213 i~~ 215 (220)
T d1jeya2 213 VRA 215 (220)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 987
No 11
>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=6e-09 Score=73.85 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=101.2
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 20122102232422335787666675346766530678899989999851046787655430223204876431244577
Q gi|254781110|r 192 LIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPSW 271 (420)
Q Consensus 192 ~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~ 271 (420)
.+++++|+|+||.....+ ..+|++.+++++..+++..-... ...++|++.|++......+.+.
T Consensus 4 aiv~~lD~S~SM~~~~~~--------------~~srl~~ak~~~~~~v~~~~~~~---~~d~vglV~f~~~~t~~~~~~~ 66 (236)
T d1jeyb2 4 AVVLCMDVGFTMSNSIPG--------------IESPFEQAKKVITMFVQRQVFAE---NKDEIALVLFGTDGTDNPLSGG 66 (236)
T ss_dssp EEEEEEECCGGGGCCBTT--------------BCCHHHHHHHHHHHHHHHHHHTT---CCCEEEEEEESCSSCBSTTCTT
T ss_pred EEEEEEECCHHHCCCCCC--------------CCCHHHHHHHHHHHHHHHHHCCC---CCCEEEEEEECCCCCCCCCCCC
T ss_conf 199999898443657789--------------99989999999999999984289---9975999997377765665655
Q ss_pred C--------------HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 8--------------48899999986404678876538899999986131012334554334776778776662489960
Q gi|254781110|r 272 G--------------TEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLT 337 (420)
Q Consensus 272 ~--------------~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~T 337 (420)
+ .......+.... ....+.|....++..+...+...... .+..+|.|||+|
T Consensus 67 ~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~a~~~~~~~~~~--------------~~~~~r~IiL~T 131 (236)
T d1jeyb2 67 DQYQNITVHRHLMLPDFDLLEDIESKI-QPGSQQADFLDALIVSMDVIQHETIG--------------KKFEKRHIEIFT 131 (236)
T ss_dssp TCSTTEEEEEEEECCCHHHHHHHHTTC-CCCSSCCCHHHHHHHHHHHHHHHSSS--------------SCCSEEEEEEEC
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHHHHC--------------CCCCCCEEEEEE
T ss_conf 663047997413220156777776530-24655555047889999887776404--------------665651799993
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 6867777765348999999997898799999548977
Q gi|254781110|r 338 DGENNNFKSNVNTIKICDKAKENFIKIVTISINASPN 374 (420)
Q Consensus 338 DG~~~~~~~~~~~~~~c~~~k~~gi~i~tIgf~~~~~ 374 (420)
||+++... .....+++.+|+.||+||+||++....
T Consensus 132 DG~~~~~~--~~~~~~a~~l~~~~I~i~~ig~g~~~~ 166 (236)
T d1jeyb2 132 DLSSRFSK--SQLDIIIHSLKKCDISLQFFLPFSLGK 166 (236)
T ss_dssp CCCSCCCC--TTHHHHHHHHHHTTEEEEEEESSCCC-
T ss_pred CCCCCCCH--HHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 69987683--789999999987598899994477677
No 12
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31 E-value=5.9e-06 Score=54.34 Aligned_cols=176 Identities=14% Similarity=0.106 Sum_probs=95.8
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC-----
Q ss_conf 432012210223242233578766667534676653067889998999985104678765543022320487643-----
Q gi|254781110|r 190 IFLIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVE----- 264 (420)
Q Consensus 190 ~~~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 264 (420)
+.|+.|+.|.++||.. .++.++..+..+++.+.... ...|+++..|.+...
T Consensus 5 PvDl~Fv~D~TgSM~~---------------------~i~~vk~~i~~i~~~l~~~~---~~~r~g~~~f~D~~~~p~~~ 60 (248)
T d1tyeb2 5 PVDIYYLMDLSYSMKD---------------------DLWSIQNLGTKLATQMRKLT---SNLRIGFGAFVDKPVSPYMY 60 (248)
T ss_dssp CEEEEEEEECSGGGGG---------------------GHHHHHHHHHHHHHHHHHHC---SCEEEEEEEECCCSSTTTSC
T ss_pred CEEEEEEEECCCCHHH---------------------HHHHHHHHHHHHHHHHHHHC---CCCEEEEEEEEECCCCCCCC
T ss_conf 8048999978708799---------------------99999999999999998428---57549889877355676422
Q ss_pred -------------------------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC-----CCCCCCCC
Q ss_conf -------------------------124457784889999998640467887653889999998613-----10123345
Q gi|254781110|r 265 -------------------------KNIEPSWGTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILT-----SDKKRSFF 314 (420)
Q Consensus 265 -------------------------~~~~lt~~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~-----~~~~~~~~ 314 (420)
...++|.+...+...++.+. +.||...+++...|..... -+|
T Consensus 61 ~~~~~~~~~p~~~~~~~~~~~f~~~~~~~~t~d~~~f~~~l~~~~---~~GggD~pE~~~~Al~~a~~~~~~i~W----- 132 (248)
T d1tyeb2 61 ISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQS---VSRNRDAPEGGFDAIMQATVCDEKIGW----- 132 (248)
T ss_dssp CCSGGGGTCGGGGGTSCCCCCCSEEEEEEEESCHHHHHHHHTTCC---CCCCSSSSBCHHHHHHHHHHCHHHHTC-----
T ss_pred CCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHEE---CCCCCCCCCHHHHHHHHHHHHHHHCCC-----
T ss_conf 360543168653446554566443103777779999999985011---316889750389999999987630798-----
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC-----------------------------CCHHHHHHHHHHHCCCEEE
Q ss_conf 54334776778776662489960686777776-----------------------------5348999999997898799
Q gi|254781110|r 315 TNFFRQGVKIPSLPFQKFIIFLTDGENNNFKS-----------------------------NVNTIKICDKAKENFIKIV 365 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~-----------------------------~~~~~~~c~~~k~~gi~i~ 365 (420)
+++.+|++|++||+-...... ......+++.++.++|.++
T Consensus 133 -----------r~~a~r~viliTDA~~H~~~d~~l~g~~~~~d~~~~~~~~~~~~~~~~~dyps~~ql~~~l~~~~i~~i 201 (248)
T d1tyeb2 133 -----------RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLI 201 (248)
T ss_dssp -----------CTTSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTSBBGGGGTSCCCCHHHHHHHHHHTTEEEE
T ss_pred -----------CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE
T ss_conf -----------888608999988787554531233233456777554677785356543457888999999998295799
Q ss_pred EEEECCCCCHHHHHHHHH-CCCCCEEEECCHHHHHHHHHHHHHHHHCC
Q ss_conf 999548977899999862-18982798179899999999999874202
Q gi|254781110|r 366 TISINASPNGQRLLKTCV-SSPEYHYNVVNADSLIHVFQNISQLMVHR 412 (420)
Q Consensus 366 tIgf~~~~~~~~~l~~ca-s~~~~yf~a~~~~~L~~aF~~Ia~~I~~l 412 (420)
.+ ...+...+.+.-+ -.+|.++..-+. +-..+.+.|-+...++
T Consensus 202 fa---vt~~~~~~Y~~l~~~~~g~~~~~l~~-dssNi~~lI~~~y~~i 245 (248)
T d1tyeb2 202 FA---VTENVVNLYQNYSELIPGTTVGVLSM-DSSNVLQLIVDAYGKI 245 (248)
T ss_dssp EE---ECGGGHHHHHHHHHTSTTCEEEECSS-CCHHHHHHHHHHHHTC
T ss_pred EE---ECCHHHHHHHHHHHHCCCCEEEEECC-CCHHHHHHHHHHHHHH
T ss_conf 99---88315689999998569857987055-3444999999999987
No 13
>d1yvra2 c.62.1.5 (A:364-537) 60-kda SS-A/Ro ribonucleoprotein, RoRNP {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=98.23 E-value=1.7e-05 Score=51.35 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=74.5
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 20122102232422335787666675346766530678899989999851046787655430223204876431244577
Q gi|254781110|r 192 LIELVVDLSGSMHCAMNSDPEDVNSAPICQDKKRTKMAALKNALLLFLDSIDLLSHVKEDVYMGLIGYTTRVEKNIEPSW 271 (420)
Q Consensus 192 ~~~~~~d~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~ 271 (420)
.+.+++|+||||.+...+. +...++.+.-.....+. ...+++++.|++..... +++.
T Consensus 7 ~~vl~iD~SGSM~~~~~~~----------------~~~~~~~a~~~~~~~~~------~~~~~~vv~F~~~~~~~-~~~~ 63 (174)
T d1yvra2 7 RFLLAIDVSASMNQRVLGS----------------ILNASVVAAAMCMLVAR------TEKDSHMVAFSDEMLPC-PITV 63 (174)
T ss_dssp CEEEEEECSGGGGSBSTTS----------------SCBHHHHHHHHHHHHHH------HCSSEEEEEESSSEECC-SCCT
T ss_pred EEEEEEECCCCCCCCCCCC----------------CHHHHHHHHHHHHHHHC------CCCCEEEEEECCCCCCC-CCCC
T ss_conf 6999998860458966386----------------49999999999988505------68848999966774015-4673
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH
Q ss_conf 84889999998640467887653889999998613101233455433477677877666248996068677777653489
Q gi|254781110|r 272 GTEKVRQYVTRDMDSLILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKSNVNTI 351 (420)
Q Consensus 272 ~~~~~~~~i~~~~~~~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~~~~~~ 351 (420)
. ..+...+..+. ..+.|+|++..++.|+..... ..+++|++|||+++.+.... .+
T Consensus 64 ~-~~~~~~~~~~~-~~~~ggT~i~~al~~a~~~~~----------------------~~~~ivllTDg~~~~g~~~~-~~ 118 (174)
T d1yvra2 64 N-MLLHEVVEKMS-DITMGSTDCALPMLWAQKTNT----------------------AADIFIVFTDCETNVEDVHP-AT 118 (174)
T ss_dssp T-SCHHHHHHHHT-TCCCSCCCTTHHHHHHHHTTC----------------------CCSEEEEEECCCCCSSSCCH-HH
T ss_pred C-CHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHC----------------------CCCEEEEEECCCCCCCCCCH-HH
T ss_conf 1-12999999763-256666308899999986301----------------------57879999678756788798-99
Q ss_pred HHHHH--HHHCCCEEEEEEECCC
Q ss_conf 99999--9978987999995489
Q gi|254781110|r 352 KICDK--AKENFIKIVTISINAS 372 (420)
Q Consensus 352 ~~c~~--~k~~gi~i~tIgf~~~ 372 (420)
.+-.. ..+.++++++|++...
T Consensus 119 ~l~~y~~~~~~~~~~~~i~l~~~ 141 (174)
T d1yvra2 119 ALKQYREKMGIPAKLIVCAMTSN 141 (174)
T ss_dssp HHHHHHHHHTCCCEEEEEECSSS
T ss_pred HHHHHHHHCCCCCEEEEEECCCC
T ss_conf 99999987089948999987689
No 14
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=36.37 E-value=8.9 Score=14.13 Aligned_cols=23 Identities=17% Similarity=0.057 Sum_probs=15.0
Q ss_pred HHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 89999999978987999995489
Q gi|254781110|r 350 TIKICDKAKENFIKIVTISINAS 372 (420)
Q Consensus 350 ~~~~c~~~k~~gi~i~tIgf~~~ 372 (420)
.+.++..+...||++..|.-|.=
T Consensus 169 t~~lA~e~~~~gIrVN~I~PG~v 191 (261)
T d1geea_ 169 TETLALEYAPKGIRVNNIGPGAI 191 (261)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSB
T ss_pred HHHHHHHHHHHCCEEEEEEECCC
T ss_conf 89999996224958999852868
No 15
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}
Probab=30.19 E-value=11 Score=13.48 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=13.9
Q ss_pred HHHHHHHHHCCCEEEEEEECC
Q ss_conf 999999997898799999548
Q gi|254781110|r 351 IKICDKAKENFIKIVTISINA 371 (420)
Q Consensus 351 ~~~c~~~k~~gi~i~tIgf~~ 371 (420)
..+...++..||+|.+|.=|.
T Consensus 184 ~~la~el~~~gI~v~~i~PG~ 204 (250)
T d1yo6a1 184 RTLAVDLKDDNVLVVNFCPGW 204 (250)
T ss_dssp HHHHHHTGGGTCEEEEEECCC
T ss_pred HHHHHHHCCCCEEEEEEECCC
T ss_conf 999999644683999996488
No 16
>d1pd0a3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.17 E-value=14 Score=12.91 Aligned_cols=104 Identities=11% Similarity=-0.011 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 77848899999986404---678876538899999986131012334554334776778776662489960686777776
Q gi|254781110|r 270 SWGTEKVRQYVTRDMDS---LILKPTDSTPAMKQAYQILTSDKKRSFFTNFFRQGVKIPSLPFQKFIIFLTDGENNNFKS 346 (420)
Q Consensus 270 t~~~~~~~~~i~~~~~~---~~~g~T~~~~gl~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~k~iil~TDG~~~~~~~ 346 (420)
......+...++.+... ...++++.+.++..+...|.+.. -.|++.+.|-.|.+..
T Consensus 97 ~e~~~~i~~~L~~l~~~~~~~~~~~~~~G~Al~~a~~~l~~~g---------------------GkI~~f~sg~pt~GpG 155 (252)
T d1pd0a3 97 KACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGGVG---------------------GKIIVVSGTLPNLGIG 155 (252)
T ss_dssp TTTHHHHHHHHHHHHHHTTTCCCCCCCHHHHHHHHHHHHTTTC---------------------EEEEEEESSCCCSSTT
T ss_pred HHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC---------------------CEEEEEECCCCCCCCC
T ss_conf 9999999999985702114688875327999999999986379---------------------7899994679977886
Q ss_pred ------------------------CCHHHHHHHHHHHCCCEEEEEEECCCC-CHHHHHHHHHCCCCCEEEECC
Q ss_conf ------------------------534899999999789879999954897-789999986218982798179
Q gi|254781110|r 347 ------------------------NVNTIKICDKAKENFIKIVTISINASP-NGQRLLKTCVSSPEYHYNVVN 394 (420)
Q Consensus 347 ------------------------~~~~~~~c~~~k~~gi~i~tIgf~~~~-~~~~~l~~cas~~~~yf~a~~ 394 (420)
+..-+.++..+.+.||-|....+..+. +-..+-.-|.-++|..|.-++
T Consensus 156 ~l~~r~~~~~~~~~~~~~~~~~~a~~fY~~la~~~~~~~isvdlF~~~~~~~dl~~l~~l~~~TGG~~~~y~~ 228 (252)
T d1pd0a3 156 KLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFYPG 228 (252)
T ss_dssp CCCC--------------------CCHHHHHHHHHTTTTEEEEEEEEESBCCCHHHHHHHHHTTTCCEEEEET
T ss_pred CCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 0132655222367642011036068999999999987897899996256556808886576507826999589
No 17
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=21.70 E-value=16 Score=12.48 Aligned_cols=25 Identities=8% Similarity=-0.137 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 8999999997898799999548977
Q gi|254781110|r 350 TIKICDKAKENFIKIVTISINASPN 374 (420)
Q Consensus 350 ~~~~c~~~k~~gi~i~tIgf~~~~~ 374 (420)
.+.++..+...||++.+|.-|.=.+
T Consensus 162 tk~lA~el~~~gIrVN~I~PG~i~T 186 (255)
T d1gega_ 162 TQTAARDLAPLGITVNGYCPGIVKT 186 (255)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred HHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf 9999999602296899986074568
No 18
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=21.14 E-value=16 Score=12.41 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=37.2
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEC
Q ss_conf 248996068677777653489999999978987999995489778999998621898279817
Q gi|254781110|r 331 KFIIFLTDGENNNFKSNVNTIKICDKAKENFIKIVTISINASPNGQRLLKTCVSSPEYHYNVV 393 (420)
Q Consensus 331 k~iil~TDG~~~~~~~~~~~~~~c~~~k~~gi~i~tIgf~~~~~~~~~l~~cas~~~~yf~a~ 393 (420)
.-||||.|+.... -..+..+++.+|++|.++.| -.++|+.|...+..||..+
T Consensus 144 g~IiL~Hd~~~~t---~~~L~~li~~lk~~Gy~fvt--------l~e~l~~~~~~~~~~~~~~ 195 (196)
T d2c1ia1 144 GSIVLMHDIHSPT---VNALPRVIEYLKNQGYTFVT--------IPEMLNTRLKAHELYYSRD 195 (196)
T ss_dssp TEEEEEETTSHHH---HHHHHHHHHHHHHTTCEECC--------HHHHHGGGCCTTCEESSSC
T ss_pred CEEEEEECCCHHH---HHHHHHHHHHHHHCCCEEEE--------HHHHHCCCCCCCCCCCCCC
T ss_conf 9289985892879---99999999999988999988--------8997667778544457688
No 19
>d2c71a1 c.6.2.3 (A:480-683) Xylanase XynA C-terminal domain {Clostridium thermocellum [TaxId: 1515]}
Probab=20.75 E-value=17 Score=12.35 Aligned_cols=37 Identities=22% Similarity=0.118 Sum_probs=25.6
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 2489960686777776534899999999789879999
Q gi|254781110|r 331 KFIIFLTDGENNNFKSNVNTIKICDKAKENFIKIVTI 367 (420)
Q Consensus 331 k~iil~TDG~~~~~~~~~~~~~~c~~~k~~gi~i~tI 367 (420)
..||||-|+.......-..+..+.+.+|++|.++.|+
T Consensus 145 G~IvL~Hd~~~~~~~t~~aL~~li~~lk~~Gy~fvtl 181 (204)
T d2c71a1 145 GTIILLHDVQPEPHPTPEALDIIIPTLKSRGYEFVTL 181 (204)
T ss_dssp TBEEEEESCCSSSCCHHHHHHHHHHHHHHTTCEECCH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEH
T ss_conf 8589981478865569999999999999889999888
No 20
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=20.74 E-value=17 Score=12.35 Aligned_cols=23 Identities=13% Similarity=-0.146 Sum_probs=15.3
Q ss_pred HHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 89999999978987999995489
Q gi|254781110|r 350 TIKICDKAKENFIKIVTISINAS 372 (420)
Q Consensus 350 ~~~~c~~~k~~gi~i~tIgf~~~ 372 (420)
.+.++..+...||+|.+|.-|.=
T Consensus 166 t~~lA~el~~~gIrVN~I~PG~i 188 (260)
T d1x1ta1 166 TKVTALETAGQGITANAICPGWV 188 (260)
T ss_dssp HHHHHHHHTTTTEEEEEEEECCB
T ss_pred HHHHHHHHCHHCCEEEEEECCCC
T ss_conf 99999996300867999951978
Done!