HHsearch alignment for GI: 254781111 and conserved domain: TIGR02749
>TIGR02749 prenyl_cyano solanesyl diphosphate synthase; InterPro: IPR014120 This entry contains solanesyl diphosphate synthases from cyanobacteria or plastid-containing eukaryotes. A member from Arabidopsis (where both plastoquinone and ubiquinone contain the C(45) prenyl moiety) was characterised by heterologous expression as a solanesyl diphosphate synthase..
Probab=100.00 E-value=0 Score=350.14 Aligned_cols=219 Identities=24% Similarity=0.301 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCC------CCCCCHHHHHHH
Q ss_conf 999999999999999997675302457157999998750-5860079999999999617882------222402468888
Q gi|254781111|r 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH------LTALRVGAAIEC 81 (237)
Q Consensus 9 l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~------~~~~~~AaavEl 81 (237)
T Consensus 3 ~~~l~~pVe~dL~~l~~NLk~lvGa~HP-iL~AAAEHLF~AGGKR~RPaiVLLvSrAT~~~~GlkElt~~HRRLAEITEm 81 (325)
T TIGR02749 3 ATSLFAPVEDDLELLTDNLKSLVGARHP-ILYAAAEHLFSAGGKRLRPAIVLLVSRATAEEQGLKELTARHRRLAEITEM 81 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 6788899999999999877873145686-789999998715896540689999999988736663576103531336867
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999864776544532234455665432434520133222233479999731023412678888876532223566411
Q gi|254781111|r 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 (237)
Q Consensus 82 lH~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (237)
T Consensus 82 IHTASLVHDDV--~DEsd~RRG~~TVhs~F~trvAVLAGDFLFAQaSWYLANLenLEVVKLls~VI~DFAEGEI~----- 154 (325)
T TIGR02749 82 IHTASLVHDDV--IDESDVRRGVETVHSLFGTRVAVLAGDFLFAQASWYLANLENLEVVKLLSKVITDFAEGEIK----- 154 (325)
T ss_pred HHHHHHHCCCE--ECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH-----
T ss_conf 75232220220--03543448885534568481676204067899999986167721001454787564117888-----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCC
Q ss_conf 332221000000367999999986348999999999975988899999999999984999998676534432---067
Q gi|254781111|r 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236 (237)
Q Consensus 162 GQ~~dl~~~~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D---~~k 236 (237)
T Consensus 155 -Qg~~~FD~d~~le~YleKSyYKTASL~AaSskaAAvLS~~~~~v~n~LY~yGkhLGLAFQvvDDiLDFTgsTe~LGK 231 (325)
T TIGR02749 155 -QGLNRFDSDLSLEDYLEKSYYKTASLVAASSKAAAVLSDVDSKVANDLYEYGKHLGLAFQVVDDILDFTGSTEQLGK 231 (325)
T ss_pred -HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
T ss_conf -65552578878887665644678999999989988851143899999877656616335445545157788511567