HHsearch results for GI: 254781111 and protein with PDBid: 1rqj_A

Probab=100.00  E-value=0  Score=375.42  Aligned_cols=229  Identities=37%  Similarity=0.614  Sum_probs=197.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             48999999999999999999997675302457157999998750-58600799999999996178822224024688889
Q gi|254781111|r    4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI   82 (237)
Q Consensus         4 ~l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~~~~~~AaavEll   82 (237)
                      .|++++++..++|++.+++++...     ....+.+.++++|.+ .||||+||.|++++++++|++.+.++++|+++|++
T Consensus         2 ~~~~~l~~~~~~i~~~l~~~~~~~-----~~~~~~l~e~~~y~~~~gGKrlRp~l~l~~~~~~g~~~~~~~~~A~aiEll   76 (299)
T 1rqj_A            2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECI   76 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTS-----SSTTSHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             849999999999999999987626-----788807999999987179751889999999988099867899999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999864776544532234455665432434520133222233479999731023-412678888876532223566411
Q gi|254781111|r   83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLG  161 (237)
Q Consensus        83 H~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  161 (237)
                      |+||||||||+++|+|++|||+||+|.+||++.|||+||+|++.+++++++.... .........+..+..+.+..+++.
T Consensus        77 H~asLIhDDI~D~d~~~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  156 (299)
T 1rqj_A           77 HAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCG  156 (299)
T ss_dssp             HHHHHHHHTSTTTTCCCEETTEECHHHHHCHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHSTTTHHH
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999980560245221003698501131620666651177889999998578953337899999999999875999999


Q ss_pred             CCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C
Q ss_conf             332221000--000367999999986348999999999975988-8999999999999849999986765344320---6
Q gi|254781111|r  162 GQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL---P  235 (237)
Q Consensus       162 GQ~~dl~~~--~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~-~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~---~  235 (237)
                      ||.+|+.+.  .+++++|++|+++|||+||.+++.+|+++++.. ++..+.+.+||.++|++|||+||++|++||.   |
T Consensus       157 GQ~lDl~~~~~~~~~~~y~~i~~~KTa~l~~~~~~~~a~~~~~~~~~~~~~~~~~g~~lG~afQi~DD~lD~~~~~~~~G  236 (299)
T 1rqj_A          157 GQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG  236 (299)
T ss_dssp             HHHHHHHTTTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHS
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHC
T ss_conf             99999981178999999999999999999999999889984540568999999988999999985108776228886609


Q ss_pred             CC
Q ss_conf             79
Q gi|254781111|r  236 KK  237 (237)
Q Consensus       236 k~  237 (237)
                      |.
T Consensus       237 K~  238 (299)
T 1rqj_A          237 KR  238 (299)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             96