HHsearch results for GI: 254781111 and protein with PDBid: 2h8o_A
>2h8o_A Geranyltranstransferase; geranyltransferase,agrobacterium tumefaciens, structural genomics, PSI-2, protein structure initiative; 1.60A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=0 Score=396.31 Aligned_cols=232 Identities=47% Similarity=0.799 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 348999999999999999999997675302457157999998750-5860079999999999617882222402468888
Q gi|254781111|r 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81 (237)
Q Consensus 3 ~~l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~~~~~~AaavEl 81 (237)
.+++.++++..++||+.|++++...........|+.+.++|+|.+ .||||+||.|++++++++|++.+.++++|+|+|+
T Consensus 37 ~~~~~~l~~~~~~ve~~l~~~l~~~~~~~~~~~p~~l~~a~~y~~~~GGKrlRp~L~l~~~~~~g~~~~~~~~~AaaiEl 116 (335)
T 2h8o_A 37 TNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLHVGAALEC 116 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCTTCCCCCHHHHHHHHHHHHTSCSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 67999999999999999998667523444457987899999998626841099999999999829987899999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999864776544532234455665432434520133222233479999731023412678888876532223566411
Q gi|254781111|r 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161 (237)
Q Consensus 82 lH~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (237)
+|++||||||||+||+|++|||+||+|++||++.|||+||+|++.+|+++++.............+..+.+..+..+++.
T Consensus 117 iH~aSLIHDDI~~mD~~~~RRG~pt~h~~~G~~~AIlaGD~L~~~a~~~l~~~~~~~~~~~~~~~i~~l~~~~~~~g~~~ 196 (335)
T 2h8o_A 117 LHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAG 196 (335)
T ss_dssp HHHHHHHHHTSTTTTCCSEETTEECHHHHSCHHHHHHHHHHHHHHHHHHHHSTTSCSCHHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999997798768876333898650305185999999999999888998851220467888999999999999988864
Q ss_pred CCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33222100--00003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r 162 GQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234 (237)
Q Consensus 162 GQ~~dl~~--~~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~ 234 (237)
||..+... ...+++.|.+|+++|||+||.++|.+|+++++++++..+.+.+||.++|++|||+||++|++||.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~KTg~L~~~a~~~ga~l~~~~~~~~~~l~~~g~~lGlAFQI~DDilD~~gd~ 271 (335)
T 2h8o_A 197 GQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADA 271 (335)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 688887630454248999876202477989989998898804616799999999986302677555766511898