HHsearch results for GI: 254781111 and protein with PDBid: 3p8l_A

>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis}
Probab=100.00  E-value=0  Score=372.35  Aligned_cols=224  Identities=37%  Similarity=0.574  Sum_probs=197.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHH
Q ss_conf             348999999999999999999997675302457157999998750-58600799999999996178822-2240246888
Q gi|254781111|r    3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIE   80 (237)
Q Consensus         3 ~~l~~~l~~~~~~id~~l~~~l~~~~~~~~~~~~~~l~~~~~y~l-~gGKr~R~~l~l~~~~~~~~~~~-~~~~~AaavE   80 (237)
                      .+|.+.+++....|++.|++++.+.      ..++.+.+++.|.+ .||||+||.|++++++++|++.+ .++++|++||
T Consensus         8 ~~~~~~~~~~~~~v~~~l~~~~~~~------~~~~~l~~~~~y~l~~gGKr~Rp~L~l~~~~~~g~~~~~~~~~~A~avE   81 (302)
T 3p8l_A            8 HSLTNFSQQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLE   81 (302)
T ss_dssp             CCSTTHHHHHHHHHHHHHHHHHHHS------CCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             2199999999999999999998734------8877899999988708963086999999999839995177899999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999986477654453223445566543243452013322223347999973102341267888887653222356641
Q gi|254781111|r   81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML  160 (237)
Q Consensus        81 llH~asLihDDI~~~D~s~~RRG~pt~h~~~G~~~AIl~Gd~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  160 (237)
                      ++|+||||||||+++|+|++|||+||+|.+||++.||++||+|++.+|++++....  ......+.+..++++.+.++++
T Consensus        82 llH~asLIHDDI~d~D~~~~RRg~pt~~~~~G~~~Ail~GD~l~~~a~~ll~~~~~--~~~~~~~~~~~l~~~~~~~~~~  159 (302)
T 3p8l_A           82 MIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQL--GLSEKVLLMQQLAKAAGNQGMV  159 (302)
T ss_dssp             HHHHHHHHHHHSTTTTCCSEETTEECHHHHHCHHHHHHHHHHHHHHHHHHHHTSSC--CHHHHHHHHHHHHHHHSTTTHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999788613577754356886010248899998114879999999987037--8179999999999998899999


Q ss_pred             CCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             133222100--00003679999999863489999999999759888999999999999849999986765344320
Q gi|254781111|r  161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL  234 (237)
Q Consensus       161 ~GQ~~dl~~--~~~~~~~y~~i~~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~D~  234 (237)
                      .||.+|+..  ..+++++|++|+++|||+||.+||.+|+++++++++..+.+.+||.++|++|||+||++|++||.
T Consensus       160 ~Gq~~d~~~~~~~~~~~~y~~i~~~KTa~lf~~~~~~ga~la~~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~~~  235 (302)
T 3p8l_A          160 SGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTE  235 (302)
T ss_dssp             HHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf             9989998700457989999999997799999999973130048857889999999999888864159878534898