BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781111|ref|YP_003065524.1| geranyltranstransferase
protein [Candidatus Liberibacter asiaticus str. psy62]
(237 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 237
Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats.
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE
Sbjct: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG
Sbjct: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI
Sbjct: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK
Sbjct: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 11/242 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L S L E + + L L + + A+ Y+L GGK++R LV
Sbjct: 3 TTELESYLAERRQLVQEALARNLP-----PPDTYPPAVHQAMHYSLFAGGKRLRPILVLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+E IH YSLIHDDLP+MDN RRG+PT H Y E A++AG
Sbjct: 58 AGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
+ LLT AFE++S + + L + G QG++GGQ ++ + + + +V
Sbjct: 118 DALLTLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVN 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I KTG+L+ G I+ A + + L +GE LG+ FQ+ DD+LD D
Sbjct: 178 YIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTG 237
Query: 236 KK 237
K+
Sbjct: 238 KQ 239
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N + ++E ++R++ LD + Q + ++RY+LL GGK++R L
Sbjct: 65 NFDFEAYMKEKAERVNRALDAAVAQRE-------PRWIHESMRYSLLAGGKRVRPLLCIA 117
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + TA+ A E IH SLIHDDLP MDN +RRGKPT H Y E A++AG
Sbjct: 118 SCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAG 177
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL AFE +++ + + ++ IG +G++GGQ++DI E + Q+
Sbjct: 178 DALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQL 237
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ A GAI+ A E+LR F +G++FQ+ DD+LD E+L
Sbjct: 238 EYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEEL 297
Query: 235 PK 236
K
Sbjct: 298 GK 299
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 8/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L++ S+++D LD + + ++ + A+RY++ GGK++R LV
Sbjct: 2 NFKEELKQWSQKVDEALDRYIPSSDAY-----PSVIHEAMRYSIFAGGKRLRPILVLAAT 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ G+
Sbjct: 57 QAVGGNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
L T AFE+I+ + + +Q+ L + G G++GGQ + ++ ID + I
Sbjct: 117 LQTLAFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL + +GAI+ A+ N+ L + E +G+ FQ+ DDLLD E D K
Sbjct: 177 HRHKTGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAK 232
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+L++ + ++ L+ L + + A+RY++LGG K++R LV A
Sbjct: 3 NFKEELKKKAALVEEALERYLP-----PPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N L A+E IH YSL+HDDLP+MDN RRG+ T H Y E AI+AG+
Sbjct: 58 EAVGGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
LLT AFE++++ +++ G G++GGQ++D + + I
Sbjct: 118 LLTLAFELLANNDRARP-ENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL F+ +GA++A A + + L + E+LG+ FQ+ DD+LD E D K
Sbjct: 177 HRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKK 232
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + L E K ++ LD+ +L + +++ A+RY+LL GGK++R L
Sbjct: 69 MTFDFKAYLLEKGKSVNQALDNAIL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 121
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++A
Sbjct: 122 AASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 181
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ 176
G+ LL +AFE +++ + + + + L +IG +G++ GQ++DI I
Sbjct: 182 GDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 241
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ I KT AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD E+
Sbjct: 242 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 301
Query: 234 LPK 236
L K
Sbjct: 302 LGK 304
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 309
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L+E +++ LD L + +++ A+RY+LL GGK++R L
Sbjct: 17 FDLSTYLKERKAQVEAALDRSL-------PLGYPEKIYEAMRYSLLAGGKRLRPILCLAT 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E +H SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 70 CELMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGD 129
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
GLL YAFE +++ + Q++ L +G G++GGQ++D++ E + Q +
Sbjct: 130 GLLAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLH 189
Query: 182 KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ T G I+A A+ + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 190 YIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELG 249
Query: 236 K 236
K
Sbjct: 250 K 250
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 131/242 (54%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S L+ +D L+ S + +++ A+RY+LL GGK++R L
Sbjct: 14 SFDLTSYLKHQKDLVDQALE-------SSLPITKPEKIYEAMRYSLLAGGKRLRPILCLA 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG
Sbjct: 67 TCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+GLL+YAFE +++ + +++ L +G G++GGQ+LD++ E +
Sbjct: 127 DGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETL 186
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGAI+A A++ E E+L + +N+G+ FQ+ DD+LD +L
Sbjct: 187 TFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEEL 246
Query: 235 PK 236
K
Sbjct: 247 GK 248
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L++ + +D L+ L + L ++RY++ GGK++R L+
Sbjct: 2 DLKQYLKQKCELVDQALERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+AL A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+
Sbjct: 57 EAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FM 179
LLT AF ++S ++ R +++ + H G +GM+GGQM+D++ E + +
Sbjct: 117 LLTEAFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTGAL+ + +GAI+ A++ + L + + +G+ FQ+ADD+LD E +L K
Sbjct: 177 IHTHKTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L++ + +D L+ L + L A+RY++ GGK++R L+
Sbjct: 2 DLKEYLKQKCQLVDQALERYLPD-----GKELPASLHGAMRYSVFAGGKRVRPVLMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+
Sbjct: 57 EAVGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FM 179
LLT AF ++S+ R +++ + G +GM+GGQ++D++ E + +
Sbjct: 117 LLTEAFILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTGAL+ + SGAIM AS+ + + L + + +G+ FQ+ADD+LD E +L K
Sbjct: 177 IHTHKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGK 236
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 294
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+L+ + +D L++ L + + A+RY++ GGK++R L A
Sbjct: 4 QDQLKSYALAVDKALNEYLPAAE-----VYPSTIHEAMRYSVFAGGKRLRPILTIAAAEA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + V A+E IH YSL+HDDLP+MDN RRG+PT H Y E AI+ G+ LL
Sbjct: 59 VGGSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALL 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
T AFE+I+ ++ + +Q+ L + G G++GGQ++D E I +
Sbjct: 119 TQAFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL A +GAI++ AS E L + E +G+ FQ+ DDLLD E D K
Sbjct: 179 HKTGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAK 232
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L+E ID++L L + + +L A++Y+L GGK++R L
Sbjct: 2 DLKAYLKERKALIDSVLLTYLP-----PEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N AL AIE IH YSLIHDDLP+MDN +RRG PT +++ E TAI+AG+
Sbjct: 57 EIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
LL AFE+++ + N + +++ + G+ GM+ GQ D+ + ++
Sbjct: 117 LLNRAFEVLADWE--FDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLF 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I K KTG L+ + SG I S E + LR +G++LG+ FQ+ DD+LD D K
Sbjct: 175 IHKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEK 231
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 11/243 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L L E + ++ L+D + + +L A RY+L GGK++R L
Sbjct: 1 MGFDLKLYLAERKQLVEDALEDCFP-----VPSGLEKSVLEAARYSLFAGGKRLRPILCL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + A+ A+E IH YSLIHDDLP+MDN RRGKPT H + E A++A
Sbjct: 56 AAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
G+ LLT AF+ +S + ++ +L G +GM+GGQ++D++ E V
Sbjct: 116 GDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATV 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234
+ KTGAL+ + E GA++ S + L+ +G +LG+ FQ+ DDLLD E D
Sbjct: 176 EYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREM 235
Query: 235 PKK 237
KK
Sbjct: 236 GKK 238
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + L E K ++ LD+ +L + +++ A+RY+LL GGK++R L
Sbjct: 15 MDFDFKAYLLEKGKSVNQALDNAVL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 67
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++A
Sbjct: 68 AACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 127
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ 176
G+ LL +AFE +++ + + + + L +IG +G++ GQ++DI I
Sbjct: 128 GDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 187
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ I KT AL+ + GAI+ + + ERLR F +G++FQ+ DD+LD E+
Sbjct: 188 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 247
Query: 234 LPK 236
L K
Sbjct: 248 LGK 250
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
Length = 316
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + L + + ++ LD + + + +++ ++RY+L GGK++R L
Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAIAVTYPEKIYESMRYSLMAGGKRLRPILCLAT 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
GLL+YAFE +++ + Q++ L +G G++GGQ++D+ E + +
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLT 196
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KTGAL+ GAI+A A++ + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELG 256
Query: 236 K 236
K
Sbjct: 257 K 257
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
Length = 309
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S L+E + ++ LD L T +++ A+RY+LL GGK++R L
Sbjct: 16 DFDLASYLKEKKQLVEAALDQSLPITR-------PEKIYEAMRYSLLAGGKRLRPILCLT 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG
Sbjct: 69 TCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQV 177
+ LL+YAFE +++ + ++ L +G G++GGQ+ + +
Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTL 188
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L S L+E + ++ LD L T +++ A+RY+LL GGK++R L
Sbjct: 16 NFELASYLKEKKQLVEAALDQSLHITR-------PEKIYEAMRYSLLAGGKRLRPILCLT 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L +L A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG
Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQV 177
+ LL+YAFE +++ + ++ L +G G++GGQ+ + +
Sbjct: 129 DALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTL 188
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGAI+A A + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + + + ++ LDD + ++ ++RY+LL GGK+IR L
Sbjct: 77 TFDFKSYMLQKADSVNKALDD-------SIPLTEPLKIQESMRYSLLAGGKRIRPMLCIA 129
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + TA+ A+E +H SL+HDDLP MDN +RRGKPT H + E A++AG
Sbjct: 130 ACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAG 189
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
+ +L ++FE ++S + +++ L +G +G++ GQ++DI E +DE +
Sbjct: 190 DAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHL 249
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD
Sbjct: 250 EFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVT 303
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L++ +D L+ + +++ A+RY+LL GGK++R L
Sbjct: 15 FDLKAYLKQQKDLVDQALE-------GSLPITKPEKIYEAMRYSLLAGGKRLRPILCLAT 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 68 CELMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
GLL+YAFE +++ + N Q++ L +G G++GGQ+LD++ E +
Sbjct: 128 GLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLT 187
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I KTGAL+ + SGAI+A A+ ++ RL + +N+G+ FQ+ DD+LD +L
Sbjct: 188 FIHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELG 247
Query: 236 K 236
K
Sbjct: 248 K 248
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L S L++ + ++ LD L T + + A+RY+LL GGK++R L
Sbjct: 16 NFDLASYLKDKQQLVEAALDRSLAITR-------PETIYEAMRYSLLAGGKRLRPILCLT 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L AL A+E IH SLIHDDLP+MDN RRGK T H +Y E AI+AG
Sbjct: 69 TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQV 177
+GLL YAFE ++ + + ++ L +G G++GGQ+ I +
Sbjct: 129 DGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTL 188
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGAI+A S + +RL + +N+G+ FQ+ DD+LD +L
Sbjct: 189 KFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 132/241 (54%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
L S L+E ++++ L+ +L Q + ++RY+LL GK++R L
Sbjct: 9 FDLKSYLKERQRQVEAALNAIL-------PPQDPPLIYESMRYSLLAEGKRLRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E +H SLIHDDLPSMDN RRG+PT H Y E AI+AG+
Sbjct: 62 CELAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LLTYAFE I+ ++ + +++ +L +G +G++GGQ++D+Q E D+ + +
Sbjct: 122 ALLTYAFEAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLH 181
Query: 182 KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ T + SGAI+A AS+ +E+LR + + +G+ FQ+ DD+LD +L
Sbjct: 182 YIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELG 241
Query: 236 K 236
K
Sbjct: 242 K 242
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L++ + +D L+ L + L ++RY++ GGK++R L+
Sbjct: 2 DLKQYLKQKCELVDQSLERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AL A+E IH YSLIHDDLP+MDN RRG PT H Y E TAI+AG+
Sbjct: 57 EAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FM 179
LLT AF ++S + R +++ + H G +GM+GGQM+D++ E + +
Sbjct: 117 LLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTGAL+ + +GAI+ A + + L + + +G+ FQ+ADD+LD E +L K
Sbjct: 177 IHTHKTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD+ + + + A+RY+LL GGK++R L
Sbjct: 73 FNFKTYVAEKAISVNKALDE-------AVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAA 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN IRRGKPT H Y E A++AG+
Sbjct: 126 CELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE I++ + + + L +IG +G++ GQ+ DI +
Sbjct: 186 SLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLE 245
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD E+L
Sbjct: 246 FIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELG 305
Query: 236 K 236
K
Sbjct: 306 K 306
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + L + ++++ L L+ + +R+ A+RY+LL GGK++R L
Sbjct: 5 TFNLDTYLSQRQQQVEEALSAALV-------PAYPERIYEAMRYSLLAGGKRLRPILCLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP+MDN RRGKPT H + E AI+AG
Sbjct: 58 ACELAGGSVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
+ LL YAFE I+S + + Q++ + H + G++GGQ++D++ E +
Sbjct: 118 DALLAYAFEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + SG I+A A + RL + ++G+ FQ+ DD+LD
Sbjct: 178 YIHSHKTGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSE 234
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 13/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +K ++ LD+ + Q+ ++ A+RY+LL GGK++R L
Sbjct: 82 FEEYMATKAKHVNKALDE-------AIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACE 134
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E TAI+AG+ L
Sbjct: 135 LVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAL 194
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
L+++FE ++ + + + + L +G +G++ GQ +D + + + + + I
Sbjct: 195 LSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIH 254
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L+ + GAI+ A ER+R + +G++FQ+ DD+LD E+L K
Sbjct: 255 IHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGK 312
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + +K ++ LD+ + Q ++ D L ++RY+LL GGK++R L
Sbjct: 19 SFDFNQYMVDRAKLVNKALDEAVPQ-------KYPDTLYESMRYSLLAGGKRVRPALCLA 71
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E IH SLIHDDLPSMDN RRG+PT H Y E AI++G
Sbjct: 72 ACELIGGDVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSG 131
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
+ LLTYAFE I+ + ++++ L G +G++ GQ++DIQ E +
Sbjct: 132 DALLTYAFEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLK 191
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ + GAI+ A + E+LR + N+G+ FQ+ DD+LD +
Sbjct: 192 YIHLHKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTE 248
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 11/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L L + + ++ LD + + + +++ A+RY+LL GGK++R L
Sbjct: 8 NFNLVDYLSQRRELVEAALD-------ASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLA 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLIHDDLP+MDN RRGKPT H +Y E AI+AG
Sbjct: 61 ACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+GLL YA+E ++ Q+ +++ L H + G++GGQ++D++ E + + +
Sbjct: 121 DGLLAYAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTL 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ + SGA +A ASQ+ R F N+G+ FQ+ DD+LD K
Sbjct: 181 NFIHAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEK 239
>gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
Length = 316
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + L + + ++ LD + + + +++ ++RY+L GGK++R L
Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+
Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
GLL+YAFE +++ + Q++ L +G G++GGQ++DI E + +
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KTGAL+ GAI+A A++ + ERL + +N+G+ FQ+ DD+LD
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITA 250
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + L + ++++ L ++ + + +R+ A+RY+LL GGK++R L
Sbjct: 5 TFNLKAYLSQRQQQVEEAL-------SAALVPAYPERIYEAMRYSLLAGGKRLRPILCLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L AL A+E IH SLIHDDLP+MDN RRGKPT H + E AI+AG
Sbjct: 58 ACELAGGTVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
+ LL +AFE I+S + + Q++ + H + G++GGQ++D++ E +
Sbjct: 118 DALLAFAFEHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + SG I+A + L + ++G+ FQ+ DD+LD
Sbjct: 178 YIHSHKTGALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSE 234
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 126/241 (52%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + E + R++ LDD + + ++ A+RY+LL GGK++R L
Sbjct: 77 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 129
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 130 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 189
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
LL +AFE I+ + + + L +IG +G++ GQ++DI E + Q+
Sbjct: 190 ALLAFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLE 249
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD ++L
Sbjct: 250 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELG 309
Query: 236 K 236
K
Sbjct: 310 K 310
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 16/242 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ ++ + +I+ LD + + + +RL ++RY+LL GGK+IR L
Sbjct: 51 EFNAYIKGVNAKIERALD-------ASVPVHYPERLSESMRYSLLAGGKRIRPALCLAAC 103
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + TA+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+
Sbjct: 104 ELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 163
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQV 177
LL++AFE I ++++ + +G +G++GGQ++DI E + +
Sbjct: 164 LLSHAFEYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTL 223
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + +GAI+ AS+ + +L + +N+G+ FQ+ DD+LDC +L
Sbjct: 224 KYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEEL 283
Query: 235 PK 236
K
Sbjct: 284 GK 285
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
L + L+E ++ L+ + + + +++ A+RY+L GGK++R L
Sbjct: 14 TFDLKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLIHDDLP+MDN RRGKPT H Y E AI+AG
Sbjct: 67 TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLL YAFE + + +++ L H + G++GGQ++D++ E + + +
Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186
Query: 181 QKMKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + SGA++ A +++ RL + N+G+ FQ+ DD+LD
Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
Length = 309
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 126/240 (52%), Gaps = 14/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L+E I++ LD L + D++ A+RY+LL GGK++R L
Sbjct: 18 DLLTYLKERKALIESALDQALPRME-------PDKIYEAMRYSLLAGGKRLRPILCLATC 70
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L A+ A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG+G
Sbjct: 71 ELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDG 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---M 179
LL YAFE ++ + Q++ L +G G++GGQ+LD++ E + +
Sbjct: 131 LLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSF 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTGAL+ G I+A A+ +RL + +N+G+ FQ+ DD+LD +L K
Sbjct: 191 IHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGK 250
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ E + ++ L+ S + + ++ ++RY+LL GGK++R L
Sbjct: 57 TFDFKKYMLEKASSVNKALE-------SAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLA 109
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + TA+ +IE IH SL+HDDLP MDN ++RRG PT HI + E A++AG
Sbjct: 110 ACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAG 169
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
+ LL Y+FE +++ + +++ L I +G+L GQ++DI E + E +
Sbjct: 170 DALLAYSFEYLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHL 229
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ + E ERLR F +G++FQ+ DD+LD
Sbjct: 230 EYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVT 283
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 294
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
KL+E + ++ L +L + + + A+RY++ GGK++R L
Sbjct: 2 FKEKLREKQQLVEKELHRILD------IDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L +E++ + + + G +G++GGQ + Q+ + ++
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KTGAL+ + +GA +A A++ E LR + +G FQ+ DD+LD + K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + + + I+ LD + + + ++ ++RY+LL GGK++R L
Sbjct: 75 TFDFKSYMLQKAASINQALD-------AAVPIREPTKIHESMRYSLLAGGKRVRPALCLA 127
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++AG
Sbjct: 128 ACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 187
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL AFE I+ + + + L IG +G++ GQ++DI E + ++
Sbjct: 188 DALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKL 247
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A GAIM + E E+LR + ++G++FQ+ DD+LD ++L
Sbjct: 248 EFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 307
Query: 235 PK 236
K
Sbjct: 308 GK 309
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
KL+E + ++ L +L + + A+RY++ GGK++R L
Sbjct: 2 FKEKLREKQQLVEKELHRILDIEEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L +E++ + + + G +G++GGQ + Q+ + ++
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KT AL+ + +GA +A A++ + LR + +G FQ+ DD+LD + K
Sbjct: 176 IHEHKTAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEK 232
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L+ + ++++ LD + + + L A+RY+LL GGK++R L
Sbjct: 19 FDFAAYLESSRQQVEQALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 71
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+AG+
Sbjct: 72 CELAGGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE+++ + +++ L+ G G++GGQ++D++ E D +
Sbjct: 132 ALLTRAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEY 191
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ +GA++A AS+ L + +G+ FQ+ DD+LD
Sbjct: 192 IHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSE 247
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD+ + + + A+RY+LL GGK++R L
Sbjct: 73 FNFKTYVAEKAISVNKALDE-------AVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAA 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 126 CELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE I++ + + + L +IG +G++ GQ+ DI +
Sbjct: 186 SLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLE 245
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD
Sbjct: 246 FIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVT 298
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 14/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ E ++ LD + + +++ A+RY+LL GGK++R L L
Sbjct: 1 MAERKAEVEQALDR-------SIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGG 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A+ ++E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+GLL+YA
Sbjct: 54 TMEMAMPTACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYA 113
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMK 184
FE +++ T + ++ L +G G++GGQ++D++ E + I K
Sbjct: 114 FEFVATQTTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
TGAL+ SGAI+A S +ERL + + +G+ FQ+ DD+LD +L K
Sbjct: 174 TGALLEACVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGK 228
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + L+E K D LD + + +++ A+RY+LL GGK++R L
Sbjct: 16 TFNLVAYLKERQKLCDNALDR-------AIPIIYPEKIYEAMRYSLLAGGKRVRPILCLA 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG
Sbjct: 69 TCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAG 128
Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
+GLL AFE+++ + + Q+++ L +G G++GGQ++D++ E + +
Sbjct: 129 DGLLALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLET 188
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + KT AL+ SG I+A AS + +RL + EN+G+ FQ+ DD+LD
Sbjct: 189 LNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITS 244
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + + I+ L+ + + + ++ ++RY+LL GGK++R L
Sbjct: 75 FDFKSYMVQKASAINQALE-------AAVSLREPLKIHESMRYSLLAGGKRVRPALCLAA 127
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++AG+
Sbjct: 128 CELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGD 187
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
LL +AFE I+ + + + L IG +G++ GQ++DI E +D ++
Sbjct: 188 ALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLE 247
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT L+ A GAIM + E E+LR + ++G++FQ+ DD+LD ++L
Sbjct: 248 FIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELG 307
Query: 236 K 236
K
Sbjct: 308 K 308
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 128/241 (53%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L S L+E + ++ LD + + +++ A+RY+LL GGK++R L
Sbjct: 17 FDLVSYLKEKKQLVEAALD-------ASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTT 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+
Sbjct: 70 CELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGD 129
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---F 178
LL+YAFE +++ + ++ L +G G++GGQ+LD++ E
Sbjct: 130 ALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILK 189
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I KTGAL+ + SGAI+A A+ + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 190 FIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELG 249
Query: 236 K 236
K
Sbjct: 250 K 250
>gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 368
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + + + ++ LDD + + ++ ++RY+LL GGK++R L
Sbjct: 75 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 127
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H + E AI+AG+
Sbjct: 128 CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 187
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ + + + L +IG +G++ GQ++DI E + + +
Sbjct: 188 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 247
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L
Sbjct: 248 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 307
Query: 236 K 236
K
Sbjct: 308 K 308
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 127/237 (53%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + + +K ++ +D+ + ++ + L ++RY+LL GGK++R L
Sbjct: 52 SFDFNTYMVDRAKLVNKAMDE-------AVPLKYPETLNESMRYSLLAGGKRVRPALCLA 104
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E +H SLIHDDLPSMDN RRG+PT H Y E AI+AG
Sbjct: 105 ACELVGGDIHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAG 164
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
+ LL+++FE I+ + ++++ L +G G++ GQ++DIQ E +
Sbjct: 165 DALLSFSFEHIARATKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLK 224
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KT AL+ + GAI+ A ++ E+LR + N+G+ FQ+ DD+LD
Sbjct: 225 YIHEHKTAALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTE 281
>gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 298
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G + + LQ +++++ L+ L +Q + L ++ Y+L GGK+IR LV
Sbjct: 2 GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+
Sbjct: 57 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 116
Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
LLT+AF + ++ + ++ ++ G +GM+GGQ + ++
Sbjct: 117 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D K
Sbjct: 177 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 235
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + L+E ++ L+ + + + +++ A+RY+L GGK++R L
Sbjct: 14 TFDVKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLIHDDLP+MDN RRGKPT H Y E AI+AG
Sbjct: 67 TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLL YAFE + + +++ L H + G++GGQ++D++ E + + +
Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186
Query: 181 QKMKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + SGA++ A +++ RL + N+G+ FQ+ DD+LD
Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241
>gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 309
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L S L+E +++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 16 NFSLASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLA 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG
Sbjct: 69 TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+GLL YAFE +++ + +++ L +G G++GGQ+LD++ E +
Sbjct: 129 DGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD +L
Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
Length = 372
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + E + R++ LDD + + ++ A+RY+LL GGK++R L
Sbjct: 79 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
LL +AFE I+ + + + L +IG +G++ GQ++DI E + ++
Sbjct: 192 ALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLE 251
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD ++L
Sbjct: 252 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELG 311
Query: 236 K 236
K
Sbjct: 312 K 312
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 125/241 (51%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L S L+E + +D L+ + + +++ A+RY+L GGK++R L
Sbjct: 28 FDLVSYLKERQQWVDAALEQ-------SISVTYPEKIYQAMRYSLMAGGKRLRPILCLAT 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 81 CEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 140
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
GLL YAFE ++ + +++ L H + G++GGQ++D++ E + + V
Sbjct: 141 GLLAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLN 200
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I KTGAL+ + GA + AS ++L + N+G+ FQ+ DD+LD +L
Sbjct: 201 FIHAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELG 260
Query: 236 K 236
K
Sbjct: 261 K 261
>gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 303
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G + + LQ +++++ L+ L +Q + L ++ Y+L GGK+IR LV
Sbjct: 7 GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
F + + V AIE IH YSLIHDDLP+MDN RRGKPT H ++ E AI+AG+
Sbjct: 62 VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 121
Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
LLT+AF + ++ + ++ ++ G +GM+GGQ + ++
Sbjct: 122 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ + +GAI+A A + + L FG +G+ FQ+ DD+LD D K
Sbjct: 182 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 240
>gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + + I+ L+ + + Q ++ ++RY+LL GGK++R L
Sbjct: 76 SFDFKSYMLQKGNSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N A+ A+E IH SLIHDDLP MDN +RRGKPT HI + E A++AG
Sbjct: 129 ACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL +AFE I+ + + + L IG +G++ GQ++DI E +D ++
Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 308
Query: 235 PK 236
K
Sbjct: 309 GK 310
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 14/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + E + ++ L+ +L + ++ ++RY+LL GGK++R L
Sbjct: 80 DFKTYMLEKASSVNKALEQAVL-------LKEPLKIHESMRYSLLAGGKRVRPMLCIAAC 132
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 133 ELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 192
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
LL ++FE ++ + + +++ L IG +G++ GQ++DI E + E +
Sbjct: 193 LLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEF 252
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT AL+ + GAI+ A + E+LR F +G++FQ+ DD+LD ++L K
Sbjct: 253 IHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGK 312
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 11/239 (4%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M + L+ + +++ LD + + + L ++RY+LL GGK++R L
Sbjct: 14 MTSFDFAAYLEASRLKVEAALD-------GSLGPERPESLRESMRYSLLAGGKRLRPILC 66
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L + A+ A+E IH SLIHDDLP+MDN +RRG PT H Y E AI+
Sbjct: 67 LAACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAIL 126
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
AG+ LLT AFE+++ + +++ L+ G G++GGQ++D++ E +
Sbjct: 127 AGDALLTRAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLET 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTGAL+ +GA++A A E LR + +G+ FQ+ DD+LD
Sbjct: 187 LEYIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTASSE 245
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + + + I+ L+ + + Q ++ ++RY+LL GGK++R L
Sbjct: 76 SFDFKSYMLQKANSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N A+ A+ IH SLIHDDLP MDN +RRGKPT HI + E A++AG
Sbjct: 129 ACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL +AFE I+ + + + L IG +G++ GQ++DI E +D ++
Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A GAI+ + E E+LR + +G++FQ+ DD+LD ++L
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQEL 308
Query: 235 PK 236
K
Sbjct: 309 GK 310
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 126/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + L E ++ LD+ ++ + +++ A+RY+LL GGK++R L
Sbjct: 23 TFDLSNYLVERKALVEKALDN-------SIKIVYPEKIYEAMRYSLLAGGKRLRPILCLA 75
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N A+ A+E IH SLIHDDLPSMDN RRG+ T H Y E AI+AG
Sbjct: 76 TCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAG 135
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
+GLL+YAFE + + + Q++ L G G++GGQ++D + E +
Sbjct: 136 DGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTL 195
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + GAI+A SQ RL + +N+G+ FQ+ DD+LD +L
Sbjct: 196 HFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEEL 255
Query: 235 PK 236
K
Sbjct: 256 GK 257
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 12/240 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ K ++ ++ L + + + +RL ++RY+LL GGK+IR L L
Sbjct: 16 EQEFNAYIKNVNAEIERAL---DASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACEL 72
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+ LL
Sbjct: 73 VGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALL 132
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFM 179
++AFE I + + ++++ + +G +G++GGQ++DI E + +
Sbjct: 133 SHAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKY 192
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTGAL+ + +GAI+ AS+ + +L + +N+G+ FQ+ DD+LDC +L K
Sbjct: 193 IHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELGK 252
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L+ LL + + A+RY+LL GGK++R L A
Sbjct: 21 DIKQYLAAQRELVEAALEQLLPAEDGPLAAH-----IEAMRYSLLAGGKRVRPILCLAAA 75
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V A+ECIH YSLIHDDLP+MDN +RRG PT H ++ E AI+AG+G
Sbjct: 76 EAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDG 135
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQ--MLDIQDEFIDETQVF 178
LL++AFE+++ P + +QL L T +G +GM+GGQ ++ + ++ ++
Sbjct: 136 LLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQ 195
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A ++GAI AS+ + + L +G+ G+ FQ+ DDLL+ D L
Sbjct: 196 QIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTATLG 255
Query: 236 K 236
K
Sbjct: 256 K 256
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L + ++ LDD L + + L A+RY+LL GGK++R L
Sbjct: 20 FDFKAYLGSQKQLVEAALDDSL-------GPERPESLREAMRYSLLAGGKRLRPILCLAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 73 CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + +++ L+ G G++GGQ++D++ E D +
Sbjct: 133 ALLTRAFEMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEY 192
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KTGAL+ +GA++ A + + + LR + +G+ FQ+ DD+LD D L K
Sbjct: 193 IHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVLGK 252
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+ K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 SDFEEYLKNAKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
KL+E + ++ L +L + + + A+RY++ GGK++R L
Sbjct: 2 FKEKLREKQQLVEKELHRILD------IDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L +E++ + + + G +G++GGQ + Q+ + ++
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KTGAL+ + +GA +A A++ E LR + +G FQ+ DD+LD + K
Sbjct: 176 MHEHKTGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 16/243 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L E + +++ LD + ++ + A+RY+LL GGK++R L
Sbjct: 72 FDFKAYLIEKANKVNEALDQ-------AVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAA 124
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTAIIAG 120
L ++ A+E IH SLIHDDLP R E A++AG
Sbjct: 125 CELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAG 184
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LL ++FE I++ + ++ +IG +G++ GQ+ ++ +++ Q
Sbjct: 185 DSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQ 244
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ I KT AL+ A GAI+ + E E+LR F +G++FQ+ DD+LD E+
Sbjct: 245 LEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 304
Query: 234 LPK 236
L K
Sbjct: 305 LGK 307
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
S + K ++ + L ++ + A+ Y+L GGK++R L+
Sbjct: 2 EFESLFKRYRKMVEEGIGRFLPPDDTY-----PPVIHQAMNYSLKAGGKRLRPVLMLAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L +EC+H YSLIHDDLP+MDN RRGKPT H + E AI+AG+
Sbjct: 57 EWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDA 116
Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+ + Q + +++ L G +G++ GQ++D + D +
Sbjct: 117 LLTKAFELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ ++ +G I+A A++ E + L +G +LG+ FQ+ DDLLD D K
Sbjct: 177 IHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQK 233
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + E + ++ LD + + ++ ++RY+LL GGK++R L
Sbjct: 69 FDFKSYMLEKANLVNQALD-------LAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAA 121
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + LTA+ A+E IH SL+HDDLP MDN RRGKPT H+ Y E A++ G+
Sbjct: 122 CELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGD 181
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
+L++AFE +++ + + + + L IG +G++ GQ++DI E D +
Sbjct: 182 AMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 241
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT AL+ + GAI+ S E E+LR F ++G++FQ+ DD+LD E+L K
Sbjct: 242 IHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGK 301
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L+E ID + L RL A++Y+L GGK++R L
Sbjct: 2 ELKEYLKERKAIIDREILKYLPSV-----PPFGKRLYEAVKYSLTVGGKRLRPILCMAGC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N+ AL AIE IH YSLIHDDLP+MDN +RRG PT ++DE TAI+AG+
Sbjct: 57 EVVGGNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
LL AFE++S +++ ++ G+ GM+ GQ D+ + + ++
Sbjct: 117 LLNRAFEVLSQWNFDCDRK--IKVIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLF 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG L+ + SG I S+ E L+ +G+++G+ FQ+ DD+LD D K
Sbjct: 175 IHRHKTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNK 231
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + + + ++ LDD + + ++ ++RY+LL GGK++R L
Sbjct: 15 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H + E AI+AG+
Sbjct: 68 CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ + + + L +IG +G++ GQ++DI E + + +
Sbjct: 128 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 187
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L
Sbjct: 188 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 247
Query: 236 K 236
K
Sbjct: 248 K 248
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M G + ++++ LD + RL+ A+RY+LL GGK++R L
Sbjct: 1 MRGEFQQYMAARRQQVEAALDRYTAGLDA------PSRLVEAMRYSLLAGGKRLRPILTI 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ LF + + A+E IH YSLIHDDLP MD+ +RRG+PT H Y E A++A
Sbjct: 55 AASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLA 114
Query: 120 GNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLT AF +++ ++ + L H G +GM+GGQ+ D+ E +
Sbjct: 115 GDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEP 174
Query: 178 F--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I +KTGAL A G I+A A + + +RL + + G+ FQ+ DD+LD D
Sbjct: 175 QLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAA 234
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + E + ++ LD + + Q ++ ++RY+LL GGK++R L
Sbjct: 71 TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPILSIA 123
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF + A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG
Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
+ +L AF ++++ + + + ++++ L IG +G++ GQ++D+ E +
Sbjct: 184 DAMLALAFHLVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDL 243
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I + KT AL+ + GAI+ A+ E E++R + +G++FQ+ DD+LD
Sbjct: 244 EFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 297
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+E K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 SDFDKYLKETKKIVEEALD-------LSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + N ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ +GA++A A+ + L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + + + ++ LD + + + ++ ++RY+LL GGK++R L
Sbjct: 72 TFDFKSYMIQKANSVNKALD-------TAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLA 124
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP MDN +RRGK T HI + E A++AG
Sbjct: 125 ACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAG 184
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL +AFE I+ + + + L IG +G++ GQ++DI E + Q+
Sbjct: 185 DALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQL 244
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L
Sbjct: 245 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQEL 304
Query: 235 PK 236
K
Sbjct: 305 GK 306
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 13/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
++ + K+I+ LD+ + Q + A+RY+LL GGK++R L
Sbjct: 76 FEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCE 128
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ L
Sbjct: 129 LVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDAL 188
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
L+ AFE ++ + + + L +G QG++ GQ++DI ++ D + I
Sbjct: 189 LSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIH 248
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L+ + GAI+ + E ERLR + +G++FQ+ DD+LD +L K
Sbjct: 249 VHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 129/242 (53%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S L+E +++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 16 SFSLASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLA 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E IH SLIHDDLP+MDN RRGK T H + E AI+AG
Sbjct: 69 TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+GLL YAFE +++ + +++ L +G G++GGQ+LD++ +
Sbjct: 129 DGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGA++A A + +L + +N+G+ FQ+ DD+LD +L
Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L +R++ L L + QH +L A+ Y++ GGK++R L+
Sbjct: 2 DLKNYLTSQRQRVEEALAQTLP-----PKQQHPTQLHEAMHYSVFAGGKRLRPILMMAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L A+E IH YSLIHDDLP+MD+ +RRG+PT H + E TAI+AG+
Sbjct: 57 EAVGGDIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---- 178
LLT AF ++S+P ++ N R++ + + E Q
Sbjct: 117 LLTEAFVVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATV 176
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + +GA++ A+ + E L FG+ G+ FQ+ADD+LD D
Sbjct: 177 DYIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQE 234
>gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 297
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 168/240 (70%), Positives = 201/240 (83%), Gaps = 7/240 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN L KLQENS++I+++L+DLL +S++ NDRL SAIRYA+LGGK IRSFLV E
Sbjct: 1 MNDDLLLKLQENSQKIESLLNDLLSHQSSYL----NDRLRSAIRYAILGGKNIRSFLVAE 56
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
CASLF +++ T LRVGAAIEC+HCYSLIHDDLPSMDNGYIRRGKPT+H+QYDE TAI+AG
Sbjct: 57 CASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
N LLTYAFEII SP+TQLKD+IRS+L LSL N G+QGMLGGQMLDIQ+E +DE Q+ I
Sbjct: 117 NSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
Q+MKTG+LM FACE+GAI+AH +Q EK RLR +GENLGI+FQL DDLLD EE+ + KK
Sbjct: 177 QEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEENCATIEKK 236
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 13/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
++ + K+I+ LD+ + Q + A+RY+LL GGK++R L
Sbjct: 76 FEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCE 128
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L A+ + A+E IH SLIHDDLP MDN +RRGKPT H Y E TAI+AG+ L
Sbjct: 129 LVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDAL 188
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
L+ AFE ++ + + + L +G QG++ GQ++DI ++ D + I
Sbjct: 189 LSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIH 248
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L+ + GAI+ + E ERLR + +G++FQ+ DD+LD +L K
Sbjct: 249 VHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S L++ + ++ LD L +++ A+RY+LL GGK++R L
Sbjct: 16 DFDLASYLKDKKQLVEAALDQSL-------PIIRPEKIYEAMRYSLLAGGKRLRPILCLT 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L +L A+E IH SLIHDDLP+MD+ RRGK T H Y E AI+AG
Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQV 177
+ LL+YAFE +++ + ++ L +G G++GGQ+ + +
Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTL 188
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + SGAI+A A Q + ERL + +N+G+ FQ+ DD+LD +L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEEL 248
Query: 235 PK 236
K
Sbjct: 249 GK 250
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
P+ L ++ LDD L + ++L A+RY+LL GGK++R L
Sbjct: 15 FDFPAYLAAAKASVEEALDDSL-------GPERPEQLREAMRYSLLAGGKRLRPILCLAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 68 CELAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT +FE+++ + +++ L+ G G++GGQ++D++ E + +
Sbjct: 128 ALLTRSFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD D L K
Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGK 247
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L LQ ++ LD S + +++ A+RY+LL GGK++R L
Sbjct: 9 DFDLAQYLQVKKGVVEAALD-------SSLAIARPEKIYEAMRYSLLAGGKRLRPILCIT 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG
Sbjct: 62 ACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAG 121
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+GLL YAFE + + Q Q++ L +G G++GGQ+LD++ E +
Sbjct: 122 DGLLAYAFEYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETL 181
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KTGAL+ + +GAI+A A+ +++RL + +N+G+ FQ+ DD+LD +L
Sbjct: 182 TFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEEL 241
Query: 235 PK 236
K
Sbjct: 242 GK 243
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L E + I+ L+ LL + L A+RY++ GGK++R L
Sbjct: 2 FDDILMEKIEYINNGLNKLLD------IDDKPEILYDAMRYSVFAGGKRLRPVLCISSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ L
Sbjct: 56 LVGGDRDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDAL 115
Query: 124 LTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
L Y FE++ + + H G GM+GGQ++D+ E + T+ +
Sbjct: 116 LNYGFEVLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ + +GAIM A ++L + E +G+ FQ+ DD+LD D K
Sbjct: 176 HDHKTGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESK 231
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 PDFEKYLTDTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + N ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ + +GA++A A++ L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+ K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 SDFEKYLKNTKKVVEEALD-------VSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L++ K I+ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 DFEKYLKQTKKVIEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLASC 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 SLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDA 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
LLT AFE++S + N ++ L+ G G++GGQ++D++ E + + I
Sbjct: 122 LLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYI 181
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K
Sbjct: 182 HLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 237
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + +++ LD+ + QH ++ A+RY+LL GGK++R L
Sbjct: 73 FEFKEYMINKANQVNKALDE-------AVPLQHPQKINEAMRYSLLAGGKRVRPILCIAS 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 126 CELVGGDEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LL+ AFE ++ + + Q + L +G +G++ GQ++DI E + + +
Sbjct: 186 ALLSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEY 245
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT L+ A GAIM A ERLR + ++G++FQ+ DD+LD E+L K
Sbjct: 246 IHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGK 305
>gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062]
gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062]
Length = 301
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L S + E ++ ++ L LL + + +RLL A+ YA L GGK++R L+
Sbjct: 1 MSVALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMV 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A LF L +A+ECIHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+A
Sbjct: 61 EAARLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILA 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ LLT AF+ I+ + IR +L L G+ GM GGQMLD + E ++
Sbjct: 121 GDALLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEI 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q MKTGAL+ +AC +GAI+A+AS ++ RL FGE +G+ FQLADDLLD D
Sbjct: 181 RQLQAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGDAE 238
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L ++L++ + +ID L + + A+RY+L GGK++R LV
Sbjct: 2 DLKAELKQLNMKIDAALSRYMPAED-----VAPPVIHKAMRYSLFAGGKRLRPVLVLAGC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A+E IH YSLIHDDLP+MD+ +RRG PT H+ + E TAI+AG+G
Sbjct: 57 RAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
LLT AF +++ + + Q++ L G GM+GGQ++D++ E +
Sbjct: 117 LLTRAFGVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMA 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ + GA++ S + E L +G++LG+ FQ+ DDLLD + D K
Sbjct: 177 YIHAHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEK 234
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ + + I+ LD + +H +++ A+RY+LL GGK++R L
Sbjct: 90 IAFEFKKYMFSKANAINEALDKC-------VSLRHPEKIHEAMRYSLLAGGKRVRPILCI 142
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + + + A+E IH SLIHDDLP MDN +RRGKPT H + E A++A
Sbjct: 143 ASCELVGGSEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLA 202
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176
G+ LL +AFE I+ ++ +++ L IG +G++ GQ++D+ +
Sbjct: 203 GDALLAFAFEHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDL 262
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ I KT AL+ + GAI+ S E ERLR F +G++FQ+ DD+LD ++
Sbjct: 263 LEYIHVHKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQE 322
Query: 234 LPK 236
L K
Sbjct: 323 LGK 325
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+ +++ LD S + + + L A+RY+LL GGK++R L
Sbjct: 9 FDFSHYLEAGRLKVEQALD-------SSLGPERPESLREAMRYSLLAGGKRLRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + TAI+AG+
Sbjct: 62 CELAGGDASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+++ + +++ L+ G G++GGQ++D + +D +
Sbjct: 122 ALLTRAFEMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + SGA++A A E LR + +G+ FQ+ DD+LD
Sbjct: 182 IHLHKTGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSE 237
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+ K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ +GA++A A++ + L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+L+E + I+ L +L ++ + A++Y++ GGK++R L
Sbjct: 2 FKEQLKEKQQLIEKELHRILE------VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L AFE++ + + + G +GM+GGQ + Q+ + ++
Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KTGAL+ + +GA +A A + + LR + +G+ FQ+ DD+LD + K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + + ++ LD + + + ++ A+RY+LL GGK++R L
Sbjct: 79 TFNFKTYMLQKANSVNQALD-------AAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIA 131
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ ++E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 132 ACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 191
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL ++FE I+ + + + L +IG +G++ GQ++DI E + +
Sbjct: 192 DALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHL 251
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ A GAI+ S E E+LR F +G++FQ+ DD+LD ++L
Sbjct: 252 EFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQEL 311
Query: 235 PK 236
K
Sbjct: 312 GK 313
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 11/232 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + +K ++ L+ + + R+ ++RY+LL GGK+IR L
Sbjct: 81 DFTAYVLGKAKSVNKALE-------GAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAAC 133
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 134 ELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDA 193
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
LL +AFE I++ +++ L +IG +G++ GQ++DI E I +
Sbjct: 194 LLAFAFEHIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEF 253
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ ++ E +LR F N+G++FQ+ DD+LD
Sbjct: 254 IHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVT 305
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
P+ L ++ LDD L + ++L A+RY+LL GGK++R L
Sbjct: 15 FDFPAYLAAAKASVEEALDDSL-------GPERPEQLREAMRYSLLAGGKRLRPILCIAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 68 CELAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT +FE+++ + +++ L+ G G++GGQ++D++ E + +
Sbjct: 128 ALLTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KTGAL+ GA++ A + + LR + +G+ FQ+ DD+LD D L K
Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGK 247
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 27 TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S + + +++ A+RY+LL GGK++R L L A+ A E H
Sbjct: 33 LDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTM 92
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SLIHDDLP+MDN RRGK T H Y E AI+AG+GLL YAFE I++ + Q
Sbjct: 93 SLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQ 152
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHA 202
++ L +G ++GGQ++D++ E + + I KTGAL+ GAI+A A
Sbjct: 153 VVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGA 212
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +RL + +N+G+ FQ+ DD+LD +L K
Sbjct: 213 EPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGK 249
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LDD + ++ + A+RY+LL GGK++R L
Sbjct: 71 FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 183
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ T + + L IG +G++ GQ++D+ +
Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ S ++ E+LR F +G++FQ+ DD+LD E+L
Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELG 303
Query: 236 K 236
K
Sbjct: 304 K 304
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+L+E + I+ L +L ++ + A++Y++ GGK++R L
Sbjct: 2 FKEQLKEKQQLIEKELHRILE------VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L AFE++ + + + G +GM+GGQ + Q+ + ++
Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KTGAL+ + +GA +A A + + LR + +G+ FQ+ DD+LD + K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
P+ L+ R++ LD L + + L A+RY+LL GGK++R L
Sbjct: 28 FDFPAYLEAARLRVEAALDAAL-------GPERPESLREAMRYSLLAGGKRLRPILCLAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+
Sbjct: 81 CELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGD 140
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE+++ + + ++ L+ G G++GGQ++D++ E +
Sbjct: 141 ALLTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEY 200
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ GA++A A LR + +G+ FQ+ DD+LD
Sbjct: 201 IHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSE 256
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
L S + + + ++ L+ + + + ++ A+RY+ L GGK++R L
Sbjct: 71 FDLKSYMIQKANSVNQALE-------TAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAA 123
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDD P MDN +RRGKPT H + E A++AG+
Sbjct: 124 CELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGD 183
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL ++FE ++ + + + L +IG +G++ GQ++DI E + + +
Sbjct: 184 ALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLE 243
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD
Sbjct: 244 FIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVT 296
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
K + + ++ L +L + + A+RY++ GGK++R L
Sbjct: 2 FKEKFKNLQQMVEEELHRILDVQEK------PEIIYEAMRYSVFAGGKRLRPVLCLSACE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V +IE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GL
Sbjct: 56 LLGGDLKKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGL 115
Query: 124 LTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
L +E++ + + + G +G++GGQ+ D Q+ + ++
Sbjct: 116 LNLGYEVLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKY 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I + KT AL+ + +GA MA AS+ E E LR + +G+ FQ+ DD+LD D L K
Sbjct: 176 IHEHKTAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGK 235
Query: 237 K 237
K
Sbjct: 236 K 236
>gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 13/242 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L+E +K ++ L + + + + L A+ Y+LL GGK++R L
Sbjct: 2 EEIQRYLKEKAKSVEARLKEYMER-----PAGIPETLREAMAYSLLAGGKRLRPVLTLAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL A+E IH YSLIHDDLP+MD+ RRG PT H Y E AI+AG+
Sbjct: 57 AEALGGDEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGD 116
Query: 122 GLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQV 177
LLT AF++++ +L L+ G +GM+GGQ+ DIQ E + ++
Sbjct: 117 ALLTRAFDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEEL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
I + KTG L+ + GA++ + ++E + L + E LG+ FQ+ DD+LD D L
Sbjct: 177 QDIHRSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKL 236
Query: 235 PK 236
K
Sbjct: 237 GK 238
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + + + ++ LD + + + ++ ++RY+LL GGK++R L
Sbjct: 71 TFDFKSYMLQKANSVNKALD-------AAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLA 123
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + AL A+E IH SL+HDDLP MDN +RRGKPT HI + E A++AG
Sbjct: 124 ACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 183
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL++AFE I+ + + + L IG +G++ GQ++DI E + Q+
Sbjct: 184 DALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQL 243
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A GAI+ + E E+LR + ++G++FQ+ DD+LD ++L
Sbjct: 244 EFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQEL 303
Query: 235 PK 236
K
Sbjct: 304 GK 305
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L+ K ++ LD + ++ + L ++RY+LL GGK+IR L
Sbjct: 9 SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SL A+ AIE IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE++S + ++ L+ G G++GGQ++D++ E + +
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ +GA++A A++ L + E +G+ FQ+ DD+LD K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEK 238
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 129/235 (54%), Gaps = 14/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
++ ++ ++ LD + Q+ +++ A+RY+LL GGK++R L L
Sbjct: 1 MKSKAQAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGG 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N ++ A+E +H SLIHDDLP MDN +RRGKPT H + E TA++AG+ LLTYA
Sbjct: 54 NEEMSMPAACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYA 113
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMK 184
FE I+ T + + +++ L +G +G++ GQ++DI E + + K
Sbjct: 114 FEHIARDTTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
T L+ + GAI+ AS++E RL + N+G++FQ+ DD+LD +L K
Sbjct: 174 TAVLLESSVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGK 228
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + + ++ LDD + + ++ ++RY+LL GGK++R L
Sbjct: 53 FDFKSYMVQKANTVNQALDD-------AVPIREPKKIHESMRYSLLAGGKRVRPILCLAS 105
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++A+ A+E IH SL+HDDLP MDN RRGKPT HI Y E A++AG+
Sbjct: 106 CELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGD 165
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
LL++AFE +++ + + + L IG +G++ GQ++DI E D +
Sbjct: 166 ALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 225
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT AL+ + GAIM S E ERLR F ++G++FQ+ DD+LD E+L K
Sbjct: 226 IHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELGK 285
>gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
Length = 297
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L S L+E + +D L+ L + L ++RY++ GGK+IR L+
Sbjct: 2 DLKSYLKERCQLVDDALNRFLP-----LADDLPASLHKSMRYSIFAGGKRIRPILMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+
Sbjct: 57 EAVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQV 177
LLT AF ++S+ Q++ ++ G +GM+GGQ M + ID V
Sbjct: 117 LLTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + +SGA++ AS + E L +GE +G+ FQ+ADD+LD E
Sbjct: 177 QYIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTE 234
>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 110/242 (45%), Positives = 148/242 (61%), Gaps = 6/242 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L + + + RI+T LD LL + + RLL+A+R+ +L GGK++R LV
Sbjct: 1 MTPDLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVL 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
ECA+L L V A+E IHCYSL+HDDLP+MDN +RRGKPTVH +DE T I+A
Sbjct: 61 ECAALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILA 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT AF++I IR QL L+ G+ GM GGQMLD+Q E D T++ +
Sbjct: 121 GDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEI 180
Query: 180 I--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
MKTGAL+ +AC +GAI+A AS + +RL FG +G+ FQ+ADDLLD +L
Sbjct: 181 YKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVASPEEL 240
Query: 235 PK 236
K
Sbjct: 241 GK 242
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ E ++R++ LDD + +H ++ A+RY+LL GGK++R L
Sbjct: 67 FQFEEYMAEMAERVNQALDD-------SVPLRHPLKIHEAMRYSLLAGGKRVRPILCIAS 119
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + A + A+E IH SLIHDDLP MDN RRG PT H + E TA++AG+
Sbjct: 120 CELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGD 179
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
LL+ AFE +++ T + + +++ L +G G++GGQ++DI + I+ +++
Sbjct: 180 ALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEY 239
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT L+ + GAIM + ERLR + +G++FQ+ DD+LD E+L K
Sbjct: 240 IHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGK 299
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L L+E ++D LD+ + L+ A+RY+L GGK++R L
Sbjct: 5 MDFDLKVYLEEKRVQVDAALDEYFPKGDGLTTA-----LIKAMRYSLFAGGKRLRPILCI 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L V A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A
Sbjct: 60 AGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLA 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ET 175
G+GLLT AF +++SPK +++ + G +GM+GGQ++DI E +
Sbjct: 120 GDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFE 179
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V + KTGA++ + SGAI A A ++ + +G +G+ FQ++DD+LD E D
Sbjct: 180 TVKFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSE 239
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + + I+ LD+ ++ T ++++ A++Y+L GGK+IR L
Sbjct: 41 DFDLNQYIADKLPLIEKALDESVVSTEKET-----EKIVEAMKYSLMAGGKRIRPVLCLA 95
Query: 61 CASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+FN + A+ ++E IH SLIHDDLPSMDN +RRGKPT H+ Y E AI+A
Sbjct: 96 ACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILA 155
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LL+ +F ++ + + +++ L ++G +G+ GGQ++D++ E +
Sbjct: 156 GDALLSDSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLED 215
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KT L+ A SGAI+ AS E + F N+G+ FQ+ADD+LD + +
Sbjct: 216 LRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEE 275
Query: 234 LPK 236
L K
Sbjct: 276 LGK 278
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + E ++ LD S + + +++ A+RY+LL GGK++R L
Sbjct: 71 TFNFKAYMIEKGHSVNQALD-------SAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLA 123
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 124 ACELVGGHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAG 183
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL +AFE I+ + + + L +IG +G++ GQ++DI E + Q+
Sbjct: 184 DALLAFAFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQL 243
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ + GAI+ S E E+LR F +G++FQ+ DD+LD ++L
Sbjct: 244 EFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQEL 303
Query: 235 PK 236
K
Sbjct: 304 GK 305
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N + + ++ LD + H ++ +A+RY+LL GGK++R L
Sbjct: 77 NFPFEEYMVLKANNVNEALD-------KAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIA 129
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TAI+AG
Sbjct: 130 ACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAG 189
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
+ +L+ AFE I+ + +++ L +G +G++ GQ++D+ + ++ +
Sbjct: 190 DAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLE 249
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT L+ A GAI A ER+R + +G++FQ+ DD+LD E+L
Sbjct: 250 YIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELG 309
Query: 236 K 236
K
Sbjct: 310 K 310
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx
var. piperascens]
Length = 377
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/242 (30%), Positives = 131/242 (54%), Gaps = 14/242 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ +K ++ L+ + +Q + ++ ++RY+LL GGK++R L
Sbjct: 84 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+
Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL++AFE +++ +++ L ++G +G++ GQ++D+ E + E +
Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLE 256
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ ++ E +LR F +G++FQ+ DD+LD ++L
Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELG 316
Query: 236 KK 237
KK
Sbjct: 317 KK 318
>gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 14/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + + ++ L+D +L + ++ ++RY+LL GGK++R L
Sbjct: 65 DFKAYMIGKANSVNKALEDAVL-------VREPLKIHESMRYSLLAGGKRVRPMLCIAAC 117
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF A+ A+E IH SL+HDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 118 ELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA 177
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
LL +AFE I++ + +++ L IG +G++ GQ++D+ E I + +
Sbjct: 178 LLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEF 237
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT AL+ + GAI+ A+ + +LR F +G++FQ+ DD+LD ++L K
Sbjct: 238 IHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGK 297
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + L + ++ LD L + + L ++RY+LL GGK++R L
Sbjct: 23 DFDFSAYLAKTRNLVEGALDAAL-------GPERPESLRESMRYSLLAGGKRLRPILCLA 75
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG
Sbjct: 76 ACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 135
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ LL+ AFE++S + +++ L G G++GGQ++D + +D +
Sbjct: 136 DALLSRAFEMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLE 195
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ +GA++ A N+ E +R + +G+ FQ+ DD+LD
Sbjct: 196 YIHLHKTAALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSE 252
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S L + + ++ LD L + + L ++RY+LL GGK++R L
Sbjct: 21 FDFSSYLAKTRELVEQSLDAAL-------GPERPESLRESMRYSLLAGGKRLRPILCLAA 73
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 74 CELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGD 133
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL+ AFE+++ + +++ L+ G G++GGQ++D + +D +
Sbjct: 134 ALLSRAFEMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEY 193
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KT AL+ +GA++ A ++ + +R + +G+ FQ+ DD+LD D L K
Sbjct: 194 IHLHKTAALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGK 253
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + L + R++ LD + + + +L A+RY+LL GGK++R L
Sbjct: 8 SFDFAAYLAKEKIRVEAALD-------ASLGPERPKQLREAMRYSLLAGGKRLRPILCLA 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TAL AIE IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG
Sbjct: 61 ACELIAGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
+ LLT AFE++S + +++ L+ G G++GGQ+ D++ + +D +
Sbjct: 121 DALLTRAFEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLE 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + GA++ A + + LR + E +G+ FQ+ DD+LD
Sbjct: 181 YIHIHKTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSE 237
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L + RI++ LD + + + ++L A+RY+LL GGK++R L
Sbjct: 9 FDFTAYLAKARTRIESALD-------ASLGPERPNQLREAMRYSLLAGGKRLRPILCLAA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ AIE IH SLIHDDLPSMDN +RRG+PT H Y E AI+AG+
Sbjct: 62 CELTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+++ + + +++ L+ G G++GGQ+ D + + +D +
Sbjct: 122 ALLTRAFEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEF 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + GA++ A ++ L + + +G+ FQ+ DD+LD
Sbjct: 182 IHIHKTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSE 237
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L++ +++ LD L Q Q+ D+L A+RY+LL GGK++R L
Sbjct: 4 FDLDAYLRQCRSQVEAALDRYLPQ-------QYPDKLYEAMRYSLLAGGKRLRPILCLTS 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E AI+AG+
Sbjct: 57 CRMSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL YAF++I+ + +++ L G++GGQ++D + I +
Sbjct: 117 ALLAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KTGAL+ + SGAI+A A ERL + +G+ FQ+ DDLLD +L K
Sbjct: 177 IHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGK 236
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + + ++ L+ S + + ++ A+RY+LL GGK++R L
Sbjct: 76 FDFQSYMDQMADSVNQALE-------SAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAA 128
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 129 CELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGD 188
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL++AFE ++ + + + L +G +G++ GQ++DI E +++ +
Sbjct: 189 ALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLE 248
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT L+ A GAI+ + E ERLR F +G++FQ+ DD+LD
Sbjct: 249 YIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVT 301
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 14/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + E + I+ L D + + + +RL ++RY+LL GGK+IR L
Sbjct: 54 DFAAYIAEKNAAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 106
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+
Sbjct: 107 ELMGGTMDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 166
Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
LL++AFE I + ++++ + +G +G++GGQ++DI E + +V
Sbjct: 167 LLSHAFEYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVET 226
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + +GAI+A A + + ERL + + +G+ FQ+ DD+LDC +
Sbjct: 227 LQYIHAHKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSE 285
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 15/242 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
++ + ++ LD + ++ +++ A+RY+LL GGK++R L
Sbjct: 89 FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201
Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
LL++AFE I+ ++ ++ R +++ L IG +G+ GGQ+ DI + +
Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ + SGAI+ AS +E ER+R + +G++FQ+ DD+LD E+L
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321
Query: 235 PK 236
K
Sbjct: 322 GK 323
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L++ R++ LD + + + ++L ++RY+LL GGK++R L
Sbjct: 7 SFDFAEYLEKARTRVEDALD-------ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L AL A+E IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG
Sbjct: 60 ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
+ LLT AFE++S + +++ L+ G G++GGQ++D+ E + +
Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ GA++ A + E L + +G+ FQ+ DD+LD
Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSE 236
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 129/241 (53%), Gaps = 15/241 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L LQE ++T LD L+ T + A+RY+LL GGK++R L
Sbjct: 11 FSLAQYLQEQKTIVETALDQSLVITE-------PVTIYEAMRYSLLAGGKRLRPILCLAA 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP+MDN +RRGKPT H Y E AI+AG+
Sbjct: 64 CEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
LL+YAFE ++ + Q+++ L +G +G++GGQ++D++ E + V
Sbjct: 124 ALLSYAFEYVA-RTPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLN 182
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I KTGAL+ +GAI+A A E + L + +N+G+ FQ+ DD+LD +L
Sbjct: 183 FIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELG 242
Query: 236 K 236
K
Sbjct: 243 K 243
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ ++ + +D LD + ++ +++ ++RY+LL GGK++R L
Sbjct: 97 IEFDFNEYMKSKAVAVDAALD-------KAIPLEYPEKIHESMRYSLLAGGKRVRPALCI 149
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + A+ A+E IH SLIHDDLP MDN RRGKPT H + E TA++A
Sbjct: 150 AACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLA 209
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+ LL++AFE I+ ++ + R +++ L IG QG++GGQ++DI E +
Sbjct: 210 GDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLK 269
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L+ + SG I+ A+++E R+R + +G++FQ+ DD+LD E
Sbjct: 270 TLEWIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSE 329
Query: 233 DLPK 236
+L K
Sbjct: 330 ELGK 333
>gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 371
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + + + LD+ + + ++ A+RY+LL GGK++R L
Sbjct: 78 FSFKDYMIQKASSVHKALDE-------AVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAA 130
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 131 CELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 190
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ + + + + L +IG +G++ GQ++DI + Q+
Sbjct: 191 SLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLE 250
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ A GA++ S E E+LR + +G++FQ+ DD+LD ++L
Sbjct: 251 FIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELG 310
Query: 236 K 236
K
Sbjct: 311 K 311
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 15/242 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
++ + ++ LD + ++ +++ A+RY+LL GGK++R L
Sbjct: 89 FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201
Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
LL++AFE I+ ++ ++ R +++ L IG +G+ GGQ+ DI + +
Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ + SGAI+ AS +E ER+R + +G++FQ+ DD+LD E+L
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321
Query: 235 PK 236
K
Sbjct: 322 GK 323
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + LQ I+ L DLL Q + L A+RYA+L GGK+IR LV
Sbjct: 5 MSENFNAWLQSVQSAIEKSLSDLLPSEK-----QFPEPLHQAMRYAVLDGGKRIRPLLVF 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LF + +A+E IH YSLIHDD+P MDN +RRGKPT+H+Q+ E A++A
Sbjct: 60 ATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLA 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AF ++S K +LS LD + + Q+
Sbjct: 120 GDALQAQAFIVLSKIDDDAKLVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQLEQ 179
Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA A E L + + +G+ FQ+ DD+LD D
Sbjct: 180 MHRLKTGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTA 236
>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
Length = 301
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 105/236 (44%), Positives = 151/236 (63%), Gaps = 4/236 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L +++ ++ LD LL + + + L+ A+RY +L GGK++R FLV +
Sbjct: 3 EFTTLLAKHAHSVERRLDTLLSDQVQNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQSG 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ L V +A+EC+HCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN
Sbjct: 63 ALFDIPAEYCLDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLT+AFEII+ + L + +L+ +L + GL GM+GGQMLD++ E + I
Sbjct: 123 LLTFAFEIIAHKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILT 182
Query: 181 -QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKT AL+ FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD
Sbjct: 183 LQHMKTAALISFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTE 238
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 10/233 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L ++ ID LD L Q +++ + A+RY++ GGK++R L A
Sbjct: 2 FLQALAAKAETIDAALDRYLRQ-----ASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L AIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+ L
Sbjct: 57 AVGAPERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSAL 116
Query: 124 LTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
AFE+++ + ++ + G G++GGQ + + E ++
Sbjct: 117 FALAFEVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEA 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KTGAL A +GA++ AS + ERL F E+ G+ FQ+ DD+LD
Sbjct: 177 VHRAKTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTG 229
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 130/239 (54%), Gaps = 11/239 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L ++ N +D L + L ++++ + A+ Y++ GGK++R L
Sbjct: 2 SLDVFMKNNKNLVDQKLQEYLPN-----KSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF N T L AIE IH YSLIHDDLP++DN +RRGK T H+ + E AI+AG+
Sbjct: 57 DLFGANKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDA 116
Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
LL YAFE+++S + + + G +GM+GGQ++DI+ E + +
Sbjct: 117 LLNYAFELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETV 176
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I K KTGAL + GAI++ ASQ + E+L + + LG+ FQ+ DD+LD E D K
Sbjct: 177 SYIHKHKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQK 235
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 11/232 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ E + ++ L+ S + + + ++RY+LL GGK+IR L
Sbjct: 68 EFKEYVLEKAISVNKALE-------SAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFM 179
LL AFE I++ + + +++ L IG +G++ GQ ++ +D +
Sbjct: 181 LLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEF 240
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ A + E+LR F +G++FQ+ DD+LD
Sbjct: 241 IHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVT 292
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L+E +D LD L + + L ++RY++ GGK+IR L+
Sbjct: 2 DLKAYLKERCTLVDEALDRFLPKAD-----ELPFSLHKSMRYSVFAGGKRIRPILMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+
Sbjct: 57 DAVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDA 116
Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQV 177
LLT AF ++S + +++ ++H G GM+GGQ M +D V
Sbjct: 117 LLTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + ++GAI+ A + L +GE +G+ FQ+ADD+LD E
Sbjct: 177 QYIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTE 234
>gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 135/241 (56%), Gaps = 9/241 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN + L+E ++++ I+++ L Q + ++ + + ++RY+ L GGK++R LV
Sbjct: 1 MNK--KAFLKELKRKVN-IIEEALSQYLPG-EDEYPETIHQSMRYSMLAGGKRLRPVLVL 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + AIE IH YSLIHDDLP+MD+ RRGKPT H+ Y E AI+A
Sbjct: 57 AAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILA 116
Query: 120 GNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
G+ LLT AFE++S + + +++ ++ G +G++GGQ + ++ I
Sbjct: 117 GDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAE 176
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTGAL A ++GAI++ AS+ + L + LG+ FQ+ DD+LD E D
Sbjct: 177 TLKYIHIHKTGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTE 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L+ + ++ LD + T+ L A+RY+LL GGK++R L
Sbjct: 9 FDFAAYLRAARESVELALD-------GSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L N A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y E TAI+AG+
Sbjct: 62 CELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFEI++ + +++ L+ G G++GGQM+D + + ++ +
Sbjct: 122 ALLTRAFEIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KTGAL+ G ++ AS + LR + +G+ FQ+ DD+LD D L K
Sbjct: 182 IHLHKTGALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGK 241
>gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512]
Length = 387
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 117/241 (48%), Positives = 168/241 (69%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R F
Sbjct: 84 MDANRDTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPF 143
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TA
Sbjct: 144 LVVESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATA 203
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 204 ILAGDSLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDE 263
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D
Sbjct: 264 AGIIRLQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDA 323
Query: 235 P 235
Sbjct: 324 A 324
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L + ++ LD L+ + + L A+RY+LL GGK++R L
Sbjct: 18 FDFKAYLAKAKATVEQALDQSLV-------PERPESLREAMRYSLLAGGKRLRPILCLAA 70
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+
Sbjct: 71 CELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 130
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+++ + +++ L+ G G++GGQ++D + + +D +
Sbjct: 131 ALLTRAFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ +GA++ A LR + +G+ FQ+ DD+LD
Sbjct: 191 IHLHKTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSE 246
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +L +K I+ L+ L L A+ Y+L GGK++R L
Sbjct: 1 MNREFKQELASRAKEIEDYLESCLQFE------GVPGELQQAMEYSLMAGGKRVRPVLCL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L + +E IH YSL+HDDLP+MDN +RRGKPT H ++ E AI+A
Sbjct: 55 AWGEMTGACTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+GL ++ + + + G+ G M E ++ +
Sbjct: 115 GDGLLTQAFAMMLKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLK 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQN---EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGAL+ AC SGAI+A + + +G N+G+ FQ+ DD+LD D
Sbjct: 175 GMHAMKTGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEK 234
>gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652]
gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652]
Length = 327
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 118/241 (48%), Positives = 168/241 (69%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LLL A + + L A+ YA+L GGK++R F
Sbjct: 24 MDANRDTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPF 83
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ IRRGKPTVH+++DE TA
Sbjct: 84 LVVESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATA 143
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 144 ILAGDSLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDE 203
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D
Sbjct: 204 AGIIRLQAMKTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDA 263
Query: 235 P 235
Sbjct: 264 A 264
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L+ + R++ LD + M + + L A+RY+LL GGK++R L
Sbjct: 20 TFDFANYLKLSRDRVEIALD-------ASMGPERPESLRDAMRYSLLAGGKRLRPILCLA 72
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG
Sbjct: 73 ACELVGGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 132
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ +L+ AFE+++ + + +++ L G G++GGQ++D + + +D +
Sbjct: 133 DAMLSRAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLE 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ +GA++ A+ ++ + +R + +G+ FQ+ DD+LD
Sbjct: 193 YIHLHKTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSE 249
>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
Length = 297
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 11/241 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L+ +RI+T+LD L ++ + RL+ A+RYA L GGK++R LV
Sbjct: 3 TPDPSEALKAYQRRIETVLDQRLAADSAP-----DPRLIEAMRYATLSGGKRLRPVLVYA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + AA+E +H YSLIHDDLP+MDN +RRG+PT H +DE TAI+AG
Sbjct: 58 AGATCGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L AFEI+++ L + L H GL GM GGQ +D + ID ++
Sbjct: 118 DALQACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ ++KTGAL+ + GAI + L + E +G+ FQ+ DD+LD E D L
Sbjct: 178 RMHRLKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGDPEVLG 237
Query: 236 K 236
K
Sbjct: 238 K 238
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
++ + +++ LDD + Q ++ A+RY+LL GGK++R L
Sbjct: 73 FDFEEYMKMKAIKVNKALDD-------AIPMQEPIKIHEAMRYSLLAGGKRVRPILCMAS 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ ++E IH SLIHDDLP MDN +RRGKPT H + E TA++ G+
Sbjct: 126 CEVVGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
LL+ AFE ++S + Q + L +G +G++ GQ++DI E T++
Sbjct: 186 ALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEY 245
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KTG L+ A GAI+ ++ E ER+R + LG++FQ+ DD+LD E+L K
Sbjct: 246 IHNHKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGK 305
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
Length = 294
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 97/239 (40%), Positives = 132/239 (55%), Gaps = 11/239 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L + +++ LD LL L A+RY+LL GGK++R L C
Sbjct: 2 ELKPYLADRKYLVESALDRLLPAADRE-----PRALTGAMRYSLLIGGKRLRPILTLACC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
A+ A+EC+H YSLIHDDLP+MDN +RRG PT H QY E TAI+AG+
Sbjct: 57 EAVGGALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
LLT+AFE+ + P T + R +L+ L G GM+GGQMLDIQ E Q+ I
Sbjct: 117 LLTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL+ AC +GA + + ++ + L+ +GE LG+ FQ+ DD+LD D L K
Sbjct: 177 HIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGK 235
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L +++ LD + + + + L A+RY+LL GGK++R L
Sbjct: 20 FDFNAYLAARKAEVESALD-------ASLPPERPESLREAMRYSLLAGGKRLRPILCLAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI+AG+
Sbjct: 73 CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+++ + Q++ L+ G G++GGQ++D + + +D +
Sbjct: 133 ALLTRAFEMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 192
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KTGAL+ +GA++A A + + LR + +G+ FQ+ DD+LD D L K
Sbjct: 193 IHLHKTGALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGK 252
>gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + +++ LD+ + Q ++ A+RY+LL GGK++R L
Sbjct: 73 FEFQEYMVTKAIKVNKALDE-------AIPMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E IH SL+HDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL+ AFE +++ + Q + L +G +G++ GQ++D + + + T++
Sbjct: 186 ALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I KT L+ A GAIM ++ + ER+R + +G++FQ+ DD+LD D L K
Sbjct: 246 IHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGK 305
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 129/234 (55%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
KL+ I++ +D L A+ R+ A+ Y++ GGK++R LV
Sbjct: 2 EFKEKLRTYQSEIESAVDQYLPAEATR-----PSRIHEAMLYSMRAGGKRLRPVLVLASK 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ + L A+ A+EC+H YSLIHDDLPS+D+G +RRGKPT H Q+DE TA++AG+
Sbjct: 57 ELFD-SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDA 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
LL YAF++++ ++ + L+ L G + ++GGQM DI E ++ I
Sbjct: 116 LLAYAFQLLARHFAN-APDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFI 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT AL+ G I+ A+ + + LR +G +GI FQ+ DD+LD D
Sbjct: 175 HLNKTSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDE 228
>gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
++L++ + ++D L+ LL +S + + A+RY++ GGK++R ++ A
Sbjct: 2 EFLNELKKIAGQVDAALNRYLLPESS-----CPEIIHRAMRYSIFAGGKRLRPAMLIAAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+E IH YSLIHDDLPSMD+ RRGKPT H + E AI+AG+
Sbjct: 57 EAVGGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDA 116
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
LLT +F++++ S + + +++ ++ G G++GGQ + ++ ID +
Sbjct: 117 LLTMSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLE 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL A SGA+++ A E + L + E+ G+ FQ+ DD+LD D+ K
Sbjct: 177 YIHTKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQK 234
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ L+ + ++ LD + ++ +R+ A+RY+LL GGK++R L
Sbjct: 87 IEFDFKEYLRSKAMAVNEALDR-------AVPLRYPERIHEAMRYSLLAGGKRVRPVLCI 139
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ A+E IH SLIHDDLP MDN RRGKPT H + E TAI+A
Sbjct: 140 SACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILA 199
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+ LL++AFE I+ ++ + +++ L IG QG++GGQ+ DI E +
Sbjct: 200 GDALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLD 259
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT L+ + GAI++ AS NE ER++ + ++G++FQ+ DD+LD
Sbjct: 260 TLEWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVT 315
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ L S L+ +K ++ LD + Q+ +++ A+RY+LL GGK++R L
Sbjct: 37 LEFDLDSYLRAKAKAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCI 89
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N A+ A+E +H SLIHDDLP MD+ +RRGKPT H + E TA++A
Sbjct: 90 AACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLA 149
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
G+ LL YAFE I+ T + + +++ L +G +G++ GQ++DI E
Sbjct: 150 GDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEI 209
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ + KT L+ A SGAI+ AS++E RL + N+G++FQ+ DD+LD +
Sbjct: 210 LEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAE 269
Query: 234 LPK 236
L K
Sbjct: 270 LGK 272
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 15/244 (6%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M+ + L + +R++ LD + + + L A+RY+LL GGK++R L
Sbjct: 1 MSAEFDFKAYLGKAKERVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPIL 53
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L AL A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI
Sbjct: 54 CLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAI 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+AG+ LLT AFE+++ + +++ L+ G G++GGQ++D + + +D
Sbjct: 114 LAGDALLTRAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED 233
+ I KTGAL+ +GAI+ A + + LR + +G+ FQ+ DD+LD D
Sbjct: 174 TLEYIHLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSD 233
Query: 234 -LPK 236
L K
Sbjct: 234 VLGK 237
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L+E R+D LD L + +T+ L A+RY++ GGK++R L+
Sbjct: 2 DLKAYLKEQCARVDAALDSYLPR-----ETELPHSLHKAMRYSVFAGGKRVRPILMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ A+E IH YSLIHDDLP+MD+ RRG PT H + E AI+AG+
Sbjct: 57 QAVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116
Query: 123 LLTYAFEIISSP-----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
LLT AF+++S+P + S + G+ G M ID V
Sbjct: 117 LLTEAFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ A +GA++ A + + + +G G+ FQ+ADD+LD E
Sbjct: 177 QYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTE 234
>gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
Length = 310
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 149/243 (61%), Gaps = 8/243 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+L + ++ + LD LL + RLL A+RY +L GGK++R FLV E
Sbjct: 8 EEFRRRLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIES 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A LF V +ALR A+E IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG+
Sbjct: 68 ARLFGVEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQV 177
GLLTYAF++++ P T ++R L+L+L GL GM+GGQ + + + +
Sbjct: 128 GLLTYAFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAET 187
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+Q MKTGAL+ FA ++G I+ A+ +K+ LR +GE LG FQ+ADD+LD E D L
Sbjct: 188 MQMQAMKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGDTAAL 247
Query: 235 PKK 237
K+
Sbjct: 248 GKR 250
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + E + ++ LD + + Q ++ ++RY+LL GGK++R L
Sbjct: 71 TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIA 123
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF + A+ A+E IH SL+HDDLP MDN +RRGKPT H Y E A++AG
Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183
Query: 121 NGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
+ + AF ++++ + + ++++ L IG +G++ GQ++D+ E
Sbjct: 184 DAMLALAAFHLVATETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLED 243
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I + KT AL+ + GAI+ A+ E E++R + +G++FQ+ DD+LD
Sbjct: 244 LEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 298
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + ++E ++ + T L L Q + L A+ Y+L GGK++R LV A
Sbjct: 7 SIEAYMKEIAEAVSTRLSSSLPA-----AWQVPETLSRAMDYSLMAGGKRLRPLLVVAAA 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ V A+E +H YSLIHDDLP++DN RRGKPT H + E AI+AG+G
Sbjct: 62 EALGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDG 121
Query: 123 --LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
+ + +S K + ++ L+ G GM+GGQ + + D Q+
Sbjct: 122 LLTHAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLR 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG L+ F+ +G +A + + E L +G LG FQ+ DD+LD D K
Sbjct: 182 YIHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESK 239
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 128/236 (54%), Gaps = 12/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ L + ++ LD +Q ++ +++ A+RY+LL GGK++R L
Sbjct: 86 IKFDFKEYLLSKAMAVNEALDR-------AVQLRYPEKIHEAMRYSLLAGGKRVRPVLCI 138
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ A+E IH SLIHDDLP MDN RRGKPT H + E TA++A
Sbjct: 139 AACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLA 198
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+ LL++AFE I+ ++ + R +++ L IG QG++GGQ+ DI E +
Sbjct: 199 GDALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLD 258
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT L+ + GAI++ AS+NE ER++ + ++G++FQ+ DD+LD
Sbjct: 259 TLEWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVT 314
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 298
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 15/244 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M+ L L+ ++ID LD LL + D + A+RY++ GGK++R L
Sbjct: 1 MSSERLTEYLKYAQEKIDKHLDSLLGKN-------SPDVIYEAMRYSVFAGGKRLRPILC 53
Query: 59 TECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 54 LLSYELLSGKEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 113
Query: 117 IIAGNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + + + L G +GM+GGQ++D+ + + T
Sbjct: 114 ILAGDALLNKAAEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEIT 173
Query: 176 QV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + KT L+ +C GA +A A + +G+NLG+ FQ+ DD+LD
Sbjct: 174 EENLLYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIG 233
Query: 233 DLPK 236
D K
Sbjct: 234 DSKK 237
>gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
Length = 304
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13]
gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13]
Length = 304
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 111/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF + LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330]
gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365]
gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330]
gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365]
gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
Length = 304
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K+++ L+ +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRELEEYINLSQKKVEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + +++ LD+ + Q ++ A+RY+LL GGK++R L
Sbjct: 73 FEFQEYMVTKAIKVNKALDE-------AIPMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E IH SL+HDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGD 185
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL+ AFE +++ + Q + L +G +G++ GQ++D + + + T++
Sbjct: 186 ALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
I + KT L+ A GAIM ++ + ER+R + +G++FQ+ DD+LD D L K
Sbjct: 246 IHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGK 305
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 14/238 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L S L + S +++ +D L + +++ A+RY+LL GGK++R L
Sbjct: 11 TFDLKSYLSDRSCQVEAAIDAAL-------PVVYPEQIYEAMRYSLLAGGKRLRPILCLA 63
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A+ A+E +H SLIHDDLP+MD+ RRGK T H Y E A++AG
Sbjct: 64 TCEMLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAG 123
Query: 121 NGLLTYAFEIISSPKTQLK----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ LLTYAFE I++ Q +++ L +G +G++GGQ++D+ E +
Sbjct: 124 DALLTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDE 183
Query: 177 VF--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KT AL+ + SGA++A AS+ +RLR + + +G+ FQ+ DD+LD
Sbjct: 184 ETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITS 241
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L+E K + LD + + + +++ ++RY+LL GGK++R L
Sbjct: 16 FNLVAYLKERQKLCEAALD-------AAIPIIYPEKIYESMRYSLLAGGKRLRPILCLAT 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E IH SLIHDDLP+MDN RRG T H Y E AI+AG+
Sbjct: 69 SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
GLL YAFE ++ + R +++ +G G++GGQ++D+ E +T +
Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ G I+A AS +RL + +N+G+ FQ+ DD+LD
Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQE 246
>gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870]
gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya]
gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10]
gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94]
gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1]
gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1]
gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292]
gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1]
gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33]
gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1]
gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94]
gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68]
gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99]
gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28]
gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90]
Length = 304
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L++ + ++ LD ++Q ++ L SA+RY+L GGK++R L
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G
Sbjct: 60 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119
Query: 123 -LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L ++ + +S+ + G+ GM+ GQ++D++ E
Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E K
Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEK 236
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
Length = 298
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L++ + ++ LD +++ ++ L SA+RY+L GGK++R L
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVKNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G
Sbjct: 60 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119
Query: 123 -LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L ++ + +S+ + G+ GM+ GQ++D++ E
Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E K
Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEK 236
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L++ R++ L + + + ++L ++RY+LL GGK++R L
Sbjct: 7 SFDFAEYLEKARTRVEDAL-------GASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L AL A+E IH SLIHDDLPSMDN +RRG+PT H Y + AI+AG
Sbjct: 60 ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
+ LLT AFE++S + +++ L+ G G++GGQ++D+ E + +
Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ GA++ A + + L + +G+ FQ+ DD+LD
Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSE 236
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L++ + ++ LD ++Q ++ L SA+RY+L GGK++R L
Sbjct: 2 EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L A+E IH YSLIHDDLP+MDN RRG+PT H Y E AI+AG+G
Sbjct: 57 DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L ++ + +S+ + G+ GM+ GQ++D++ E
Sbjct: 117 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++KTGAL+ S AI+ A ++ ++L F ENLG+ FQ+ DD+LD E K
Sbjct: 177 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEK 233
>gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840]
gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840]
Length = 304
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ +K ++ L+ + +Q + ++ ++RY+LL GGK++R L
Sbjct: 84 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+
Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL++AFE +++ +++ L +IG +G++ GQ++D+ E + E +
Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 256
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ + E +LR F +G++FQ+ DD+LD
Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 309
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 12/240 (5%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M+ + L + ++++ LD + + + L A+RY+LL GGK++R L
Sbjct: 1 MSAEFDFKAYLGKAKEQVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPIL 53
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L AL A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI
Sbjct: 54 CLAACELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAI 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+AG+ LLT AFE+++ + +++ L+ G G++GGQ++D + + +D
Sbjct: 114 LAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTGAL+ +GA++ A + + LR + +G+ FQ+ DD+LD
Sbjct: 174 TLEYIHLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSE 233
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + + + ++ LD + + + + A+RY+LL GGK++R L
Sbjct: 75 TFNFKSYMVQKANSVNQALD-------AAVLLREPQMIHEAMRYSLLAGGKRVRPVLCLS 127
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 128 ACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 187
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
+ LL YAFE ++ + + + L +IG +G++ GQ++DI E + Q+
Sbjct: 188 DALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQL 247
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ + GAI+ + + E LR F +G++FQ DD+LD ++L
Sbjct: 248 EFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQEL 307
Query: 235 PK 236
K
Sbjct: 308 GK 309
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L+E K + LD+ + + +++ ++RY+LL GGK++R L
Sbjct: 16 FNLVAYLKERQKLCEAALDE-------AIPVIYPEKIYESMRYSLLAGGKRLRPILCLAT 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E IH SLIHDDLP+MDN RRG T H Y + AI+AG+
Sbjct: 69 SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
GLL YAFE ++ + R +++ +G G++GGQ++D+ E + +
Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ G I+A AS + +RL + +N+G+ FQ+ DD+LD
Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQE 246
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + +++ K ++ L + + + LL ++ Y+L GGK++R LV
Sbjct: 6 DLQTFMKDRKKLVEDALFSYMNAVEA------PEVLLESMNYSLKAGGKRLRPLLVLATL 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + V A+E IH YSL+HDDLPSMD+ RRGKPT H + E AI+AG+
Sbjct: 60 KSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDA 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLT++FE++ ++ M L G GM+GGQ ++ + + +
Sbjct: 120 LLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEY 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG L+ F+ +GAI+ A++ + +L F ++LG+ FQ+ DD+LD E D K
Sbjct: 180 IHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAK 236
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L S L K ID LD L + + + A+RY+L GGK++R L A
Sbjct: 2 ELKSYLTARGKLIDQALDRFLPR-----ASVKPRTIHKAMRYSLFAGGKRLRPALTLAAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL A+ECIH YSLIHDDLP MD+ +RRG+PT H + E A++AG+
Sbjct: 57 EACDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
LLT AFEI++ K + + + + L G Q ++GGQ+ D++ E + ++ I
Sbjct: 117 LLTIAFEILAQAKETSRYKMPALIG-ELAGASGSQWLIGGQVADLEGEGKKISGAELKYI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KT AL+ + G + A+AS + L FG++LG+ FQ+ DD+LD + K
Sbjct: 176 HRCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEK 231
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L E + D LD + + + + A+RY+LL GGK++R L
Sbjct: 16 FNLYAYLGERQQLCDAALD-------KSIPLVYPETIYEAMRYSLLAGGKRVRPILCLAT 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 69 CEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGD 128
Query: 122 GLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
GLL +F+++++ Q +++ + G G++GGQ++D+ E +
Sbjct: 129 GLLALSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KT AL+ + G I+A A+ + ++L + +N+G+ FQ+ DD+LD
Sbjct: 189 NFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITA 243
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 122/236 (51%), Gaps = 11/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
++ L++ L Q L +A+ Y+L GGK++R LV
Sbjct: 8 FKEMWSNLQTLVNRQLEEALDQ-----SGDCPPILKAAMSYSLSAGGKRLRPILVLLSCE 62
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ TAL AIE +H YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+ L
Sbjct: 63 ACGGDQSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDAL 122
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---I 180
LT AFE++++ + + + L + G GM+GGQ+ D++ E ++ + + I
Sbjct: 123 LTRAFELLANQIE--VKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAI 180
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
K KTG L+C A GA + A + L +G +G+ FQ+ DDLLD D K
Sbjct: 181 HKRKTGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEK 236
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 12/239 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + LQ+ K +T LD + + +++ ++RY+LL GGK++R L
Sbjct: 15 TFNLAAYLQKRKKLCETALDQ-------AIPVIYPEKIYESMRYSLLAGGKRLRPILCLA 67
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ A+ A+E IH SLIHDDLP+MDN RRG+ T H Y + AI+AG
Sbjct: 68 ACEMIGGTISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAG 127
Query: 121 NGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
+GLL YAFE +++ + Q++ L +G G++GGQ++D+ E + +
Sbjct: 128 DGLLAYAFEFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLET 187
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ + G I+A AS +RL + +N+G+ FQ+ DD+LD
Sbjct: 188 LNFIHNHKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQE 246
>gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 310
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 96/243 (39%), Positives = 138/243 (56%), Gaps = 8/243 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+L + ++ + LD LL + +T R L A+RY +L GGK++R FL+ E
Sbjct: 8 EDFQQRLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVET 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A LF + LR +A+E IHCYSL+HDDLP++DN +RRG+PT H YDE TAI+ G+
Sbjct: 68 ARLFGIEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
GLLTYAF++++ P T IR +L+ + + G + + V
Sbjct: 128 GLLTYAFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAKTPHTAEAV 187
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+Q MKTGAL+ +A +GAI A S+ +E L +G+ LG FQ+ADD+LD E D L
Sbjct: 188 IELQSMKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDVEADTEAL 247
Query: 235 PKK 237
KK
Sbjct: 248 GKK 250
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L E + ++ L + Q + L A+ Y+L GGK+IR L+
Sbjct: 5 EIEQFLNEQKQAVEAALSRYIAQLHG------PETLKKAMAYSLEAGGKRIRPLLLLSTI 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G
Sbjct: 59 QALGQNPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118
Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF++I+ + ++R QL+ L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEK 235
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ + + ++ LD + + ++ ++ ++RY+LL GGK++R L
Sbjct: 90 VEFDFDKYMHSKAIAVNEALDKV-------IPPRYPQKIYESMRYSLLAGGKRVRPILCI 142
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ AIE IH SLIHDDLP +DN +RRGKPT H + E TAIIA
Sbjct: 143 AACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIA 202
Query: 120 GNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL+ AFE ++ ++ +I +L+ + G +G++GGQ++DI+ E +
Sbjct: 203 GDALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLE 262
Query: 179 ---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
+ KT L+ + GAIM AS+++ ER R + +G++FQ+ DD+LD +
Sbjct: 263 TLEWVHIHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSE 322
Query: 233 DLPK 236
+L K
Sbjct: 323 ELGK 326
>gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445]
gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 304
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L LL + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E
Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+
Sbjct: 57 KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L +++ + + + + G+ GM+GGQ ++ +++ I++ ++
Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K
Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAK 233
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L+E + ++ +L + + + + +T ++ A+ Y+L GGK++R L E
Sbjct: 2 EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N A+ AIE IH YSLIHDDLP++DN +RRG+PT H Y E I+AG+
Sbjct: 57 KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L +++ + + + + G+ GM+GGQ ++ +++ I++ ++
Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT A+M +GA + A+ + E + + +N+G+ FQ+ DD+LD D K
Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESK 233
>gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5]
Length = 304
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 119/241 (49%), Positives = 169/241 (70%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALLGGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E + +
Sbjct: 121 ILAGDSLLTYAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A + Q+++ RLR FGE +G+ FQLADD+LD D
Sbjct: 181 AGIIRLQAMKTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSDA 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 138 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + E ++ LD + + + ++ ++RY+LL GGK+IR +
Sbjct: 69 FNFDSYMLEKVNMVNEALD-------ASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAA 121
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ N L A+ A+E IH SL+HDDLP MDN RRGKP H Y E A++ G+
Sbjct: 122 CEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGD 181
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
LL+ +FE I++ + + + + L ++G +G++ GQ++DI E D +
Sbjct: 182 ALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEY 241
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I KT L+ + GAIM S + E+LR F ++G++FQ+ DD+LD E+L K
Sbjct: 242 IHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGK 301
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 131/241 (54%), Gaps = 12/241 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L+E S I+ ++ L + + +T + A+ Y+L GGK++R L+ E
Sbjct: 2 DFKKELKERSIYIEDKIESYLPKEEGYQKT-----IFEAMNYSLRAGGKRLRPILLMEAY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A+E IH YSLIHDDLP++DN +RRGKPT HI + E AI+AG+
Sbjct: 57 KLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDA 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T ++++ + I + ++ G+ GM+GGQ ++ +D+ ID+ ++
Sbjct: 117 LLNTAYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I KT A++ + +GAI+A ++ E L + EN+G+ FQ+ DD+LD E D L K
Sbjct: 177 IHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 304
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 118/241 (48%), Positives = 165/241 (68%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LLL A + + L SA+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + A RVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALLGGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 121 ILAGDSLLTYAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D
Sbjct: 181 AGIIRLQAMKTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSDT 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
Length = 308
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 144/243 (59%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ +L + + +L+ LL + RL+ A+RY+ L GGK++R FLV E
Sbjct: 7 SADFAKRLDSTADETEALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLRPFLVVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ TAI+AG
Sbjct: 67 SSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQ 176
+GLLT AF+II+ + +R L +L G+ GM+GGQ + +
Sbjct: 127 DGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD E D
Sbjct: 187 VARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDVEGDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K+++ L+ +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRKLEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
Length = 331
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 116/241 (48%), Positives = 169/241 (70%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N+++I+ +L LL A + + L SA+ YA+L GGK++R F
Sbjct: 28 MDANRDTFETRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPF 87
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVH+++DE TA
Sbjct: 88 LVAESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATA 147
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+I+++P+T L D+ ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 148 ILAGDSLLTYAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDE 207
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD D
Sbjct: 208 TGIIRLQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDA 267
Query: 235 P 235
Sbjct: 268 A 268
>gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 11/239 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
Q + ++ LD+ + + + SA+RY+LL GGK++R L
Sbjct: 2 NFKENQQRYADLVNAFLDNYVKE-----NDLLEKSVYSAMRYSLLAGGKRLRPVLALAVC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + AIE +H YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G
Sbjct: 57 ELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----- 177
LL AFE++ N Q + ++++ G+ G + D + +V
Sbjct: 117 LLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ K KTGAL+ S AI+ +AS+ + L + NLG+ FQ+ DD+LD E K
Sbjct: 177 EYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEK 235
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 19/250 (7%)
Query: 1 MNG----GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
MN L + ++E RID +D L + L A+RY+L GGK+IR
Sbjct: 5 MNPESGLDLNAYIKEKKLRIDEAIDRYLPGEE-----ESPGELFKAMRYSLFAGGKRIRP 59
Query: 56 FLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
L A V+ L V A+E IH YSLIHDDLP+MDN RRGKPT H + +
Sbjct: 60 ILCLAAAEAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGD 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-- 169
AI+AG+ LLT AFE+++ I +++ + G GM+GGQ+ D++
Sbjct: 120 ALAILAGDALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEG 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + I KTGA++ + +GAI++ S+ L +G +G++FQ+ADD+L+
Sbjct: 180 KPGNLDTLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILN 239
Query: 230 CEED---LPK 236
E D L K
Sbjct: 240 VEGDRTVLGK 249
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K+I+ L+ +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRELEEYINLSQKKIEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + + + +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMLSKDQEINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L E + ++T L + + +L A+ Y+L GGK+IR L+
Sbjct: 5 SVEQFLNEQKQAVETALSRYIERLEG------PAKLKKAMAYSLEAGGKRIRPLLLLSTV 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G
Sbjct: 59 RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118
Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF++I ++ ++R +L+ L G +GM+ GQ ++ + + + +++
Sbjct: 119 LLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K
Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235
>gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ E + ++ LD+ + + + A+RY+LL GGK++R L
Sbjct: 76 FNFKIYVTEKAISVNKALDE-------AIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAA 128
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L N A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 129 CELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGD 188
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE I + + + + L +IG +G++ GQ+ DI+ +
Sbjct: 189 SLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLE 248
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ + E E+LR F +G++FQ+ DD+LD E+L
Sbjct: 249 FIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELG 308
Query: 236 K 236
K
Sbjct: 309 K 309
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 12/240 (5%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M + L + + ++ LDD L + + L A+RY+LL GGK++R L
Sbjct: 1 MTAEFDFKAYLGKAKETVEAALDDSL-------GPERPESLRDAMRYSLLAGGKRLRPIL 53
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L + A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI
Sbjct: 54 CLAACELAGGDAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAI 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+AG+ LLT AFE+++ + + +++ L+ G G++GGQ++D + + +D
Sbjct: 114 LAGDALLTRAFEMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTGAL+ +GA++ +A LR + +G+ FQ+ DD+LD
Sbjct: 174 TLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSE 233
>gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1);
farnesyltranstransferase [Arabidopsis thaliana]
gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1,
chloroplastic; Short=GGPP synthase 1; Short=GGPS1;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1;
AltName: Full=Dimethylallyltranstransferase 1; AltName:
Full=Farnesyl diphosphate synthase 1; AltName:
Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 15/238 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + ++ ++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185
Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID 173
+ LL++AFE ++S + + + + L IG +G++ GQ++DI +
Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303
>gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L+E + I+ L++ L T + L A++Y++ GGK++R L
Sbjct: 2 FDDILREKIEYINKGLNEFLS------LTDRPEVLFEAMKYSVFAGGKRLRPVLCISACE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L N AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+ L
Sbjct: 56 LVGGNKEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L Y FE++ + + G +GM+ GQ++D+ E + + +
Sbjct: 116 LNYGFEVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ + +GAI+ A ++L + E LG FQ+ DD+LD + D K
Sbjct: 176 HDHKTGALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAK 231
>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 297
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 122/240 (50%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L L + + +D L+ L S +L A+RY+L GGK++R L
Sbjct: 1 MSVDLKQYLAQRRQMVDAALEAWLPADESG------GVILKAMRYSLFAGGKRLRPILCL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A+ A+E IH YSLIHDDLP+MD+ RRG PT H + + A++A
Sbjct: 55 AGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDDDDYRRGVPTNHKVFGQGMAVLA 114
Query: 120 GNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
G+GLLT A ++ ++ L Q + G GM+GGQ D + D
Sbjct: 115 GDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAAGHLGMVGGQAADLLAETMEPDLA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V I KTGAL+C + E+G I+A A ++ RL +G +G+ FQ+ADDLLD E D
Sbjct: 175 MVDYIHARKTGALICASLEAGGILAGADRDRLSRLVRYGRRIGLAFQIADDLLDLEGDAE 234
>gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ E + ++ LD+ ++ + ++ A+RY+LL GGK++R L
Sbjct: 70 FNFKVYVAEKAICVNKALDEAIM-------VKDPPKIHEAMRYSLLAGGKRVRPMLCLAA 122
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L N A+ A+E IH SLIHDDLP MD+ +RRGKPT H Y E A++AG+
Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ T + + + L ++G +G++ GQ+ D+ +
Sbjct: 183 ALLAFAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ + E ++LR F + +G++FQ+ DD+LD +L
Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELG 302
Query: 236 K 236
K
Sbjct: 303 K 303
>gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K ++ LD +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRKLEEYINLSQKNVEEHLDKILKE-------KSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMVSKDKEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIA 114
Query: 117 IIAGNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ L A ++ + + L G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 130/239 (54%), Gaps = 14/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + + +K I+ L D + + + +RL ++RY+LL GGK+IR L
Sbjct: 48 DFGNYIADKNKAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 100
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L A+ A+E IH SLIHDDLPSMDN RRGKPT H Y E AI+AG+
Sbjct: 101 ELMGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 160
Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
LL++AFE I + ++++ + +G +G++GGQ++DI E D +V
Sbjct: 161 LLSHAFEYIGRETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLET 220
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + SGAI+A A + + ERL + + +G+ FQ+ DD+LDC +
Sbjct: 221 LKYIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSE 279
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 15/238 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + ++ ++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 81 SFDFMSYIITKAESVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 133
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 134 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 193
Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID 173
+ LL++AFE ++S + + + + L IG +G++ GQ++DI +
Sbjct: 194 DALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 253
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD
Sbjct: 254 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 311
>gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513]
gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
Length = 304
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ L L+ + + RL++A+R+ +L GGK++R FLV E A
Sbjct: 7 DFTTLLNRRAMEVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+
Sbjct: 67 ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLTYAF+II+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241
>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 301
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 108/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S L + RI+T L LL +T + +RL++A+R+ AL GGK++R LV
Sbjct: 1 MTFDLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVM 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A LF ++ G A+E IHCYSL+HDDLP+MD+ +RRG+PTVH YD+ TAI+A
Sbjct: 61 DAAGLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILA 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLT AF++I+ + IR +L L G+ GM GGQMLD++ E D ++
Sbjct: 121 GDALLTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEI 180
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGAL+ +AC +GAI+ AS + ERL FGE +G+ FQLADDLLD E
Sbjct: 181 RHLQSMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVEA 235
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ + + ++ L+ + ++ ++ ++RY+LL GGK++R L
Sbjct: 85 VEFDFNKYMDSKAMTVNEALN-------KAIPLRYPQKIYESMRYSLLAGGKRVRPVLCI 137
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ AIE IH SL+HDDLP +DN +RRGKPT H + E TA+ A
Sbjct: 138 AACELVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTA 197
Query: 120 GNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDET 175
GN L +YAFE I+ ++ + +++ L G +G++GGQM+D D ID
Sbjct: 198 GNALHSYAFEHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQ 257
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED 233
+ I KT L+ + GAI+ AS+ ER R + +G++FQ+ DD+LD D
Sbjct: 258 TLEWIHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSD 317
Query: 234 -LPK 236
L K
Sbjct: 318 ELGK 321
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L+E K+I+ +D L T + L ++RY+ L GGK++R LV +
Sbjct: 23 EFTQHLRELQKQIEMAMDTALSAT-PDVTRFVPPSLFESMRYSALGGGKRLRPVLVLLAS 81
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L A+ A+E IHCYSLIHDDLP+MD+ +RRG+PT HI Y E TAI+AG+G
Sbjct: 82 EACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDG 141
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LLT AFE++++ + + + L+ G+ G + ++ I
Sbjct: 142 LLTRAFEVLATEISNKELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQIH 201
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A G + AS + E L +G +G+ FQ+ADDLLD E K
Sbjct: 202 HRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEK 256
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/241 (33%), Positives = 121/241 (50%), Gaps = 12/241 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + L KR+D L+ L + S + RL IRY+LL GGK+IR L
Sbjct: 2 EITAYLDMQKKRVDKALEALFERELS----REYGRLAEGIRYSLLAGGKRIRPVLALAAI 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L + +E +H YSL+HDDLP+MDN +RRG+PT H+ Y E AI+AG+
Sbjct: 58 EAVGGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDA 117
Query: 123 LLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
LLT+AF ++S P + LS + + + + + ++
Sbjct: 118 LLTHAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ + KTGAL+ + G I+A AS E L +GE +GI FQ+ADDLLD +L
Sbjct: 178 NLHRHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELG 237
Query: 236 K 236
K
Sbjct: 238 K 238
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 107/239 (44%), Positives = 152/239 (63%), Gaps = 6/239 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L +++ ++ L LL + + + LL A+RY +L GGK++R FLV +
Sbjct: 3 EFITLLAKHAHSVEKRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSC 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L V +A+ECIHCYSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AGN
Sbjct: 63 ALFDIPIEYSLNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
LLT+AFEII+ ++L R +L+ +L GL GM+GGQMLD + + + + +
Sbjct: 123 LLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITTL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
Q MKT L+ FAC++GAI+ +ASQ E+L FG LG+ FQL DDLLD L K
Sbjct: 183 QHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGK 241
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 126/237 (53%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ L ++ ++ LDD L +L ++RY+ L+GGK++R L A
Sbjct: 2 EINDFLVAKAEAVNKALDDYLPAEDK-----KPAKLHQSMRYSTLMGGKRLRPVLTLIVA 56
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SLF V + AA+E +H YSLIHDDLP MD+ RRG+ H + + A+++G+
Sbjct: 57 NSLFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAFE+++ + ++ + G +GM+GGQ + + + +++ +
Sbjct: 117 ALLTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEF 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A +GAI+ A + E L + EN+G+ FQ+ DD+LD D K
Sbjct: 177 IHRYKTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEK 233
>gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
Length = 307
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 146/242 (60%), Gaps = 8/242 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
+L + + + +L LL + RL+ A+RY+ L GGK++R FLV E
Sbjct: 7 SDFAKRLDKTADDTEALLGRLLADDILPDEIARPKRLMDAMRYSSLNGGKRLRPFLVVES 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H + D+ TAI+AG+
Sbjct: 67 AAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDATAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQV 177
GLLT AF+I++ + N+R L +L G+ GM+GGQ+ + + + V
Sbjct: 127 GLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGMVGGQILDLAGEGRFGGNEPIDV 186
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
IQ+MKTGAL+ + C +GAI+ A+ E + L +G LG FQ+ADDLLD E D L
Sbjct: 187 ARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGRALGEAFQIADDLLDVEGDAAAL 246
Query: 235 PK 236
K
Sbjct: 247 GK 248
>gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L E + ++T L + + +L A+ Y+L GGK+IR L+
Sbjct: 5 SVEQFLNEQKQAVETALSRYIERLEG------PAKLKKAMAYSLEAGGKRIRPLLLLSTV 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+G
Sbjct: 59 RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118
Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF++I+ ++ ++R +L+ L G +GM+ GQ ++ + + + +++
Sbjct: 119 LLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K
Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235
>gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278]
gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS278]
Length = 306
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 104/247 (42%), Positives = 146/247 (59%), Gaps = 11/247 (4%)
Query: 1 MNG---GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSF 56
M +L + ++ + +L +LL + RL+ ++RY+ L GGK++R F
Sbjct: 1 MTATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TA
Sbjct: 61 LVVESAAVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFI 172
I+AG+ LLT AF+II+ + +R L +L G+ GM GGQ+ + +
Sbjct: 121 ILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDR 180
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
D V +Q+MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E
Sbjct: 181 DPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEG 240
Query: 233 D---LPK 236
D L K
Sbjct: 241 DAATLGK 247
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L L + I+ L + + + L S++ Y+L GGK++R LV
Sbjct: 1 MTSNLNEFLTTRKQTIEDYLFTYVQEL------TIPEDLKSSMLYSLKAGGKRLRPVLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + N + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++A
Sbjct: 55 ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ LLT +F +I S + + + + +++ L + G GM+GGQ D++ E + +
Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTG L+ F+ +GA++A AS ++ E+LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234
>gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Rhodopseudomonas palustris CGA009]
Length = 308
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 145/243 (59%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+L ++ + +L LL + RL+ AIRY+ LGG K++R FL E
Sbjct: 7 TIDFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A++F ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG
Sbjct: 67 SAAVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LLT+AF+I++ + +R L L GL GM+GGQM + + +
Sbjct: 127 DALLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D
Sbjct: 187 VARLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + LD+ + ++ + A+RY+LL GGK++R L
Sbjct: 61 TFNFNAYMLGKGNSVHKALDE-------SIMIKNPPTIHEAMRYSLLAGGKRVRPILCIA 113
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ A+E IH SLIHDDLP MDN RRGKPT H Y E A++AG
Sbjct: 114 ACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAG 173
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
+ LL +AFE +SS + L +IG +G++ GQ++DI + Q+
Sbjct: 174 DSLLAFAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQL 233
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ + GAI+ S + E+LR F +G++FQ+ DD+LD E+L
Sbjct: 234 EFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEEL 293
Query: 235 PK 236
K
Sbjct: 294 GK 295
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L+E +D L+ L + + L A+RY++ GGK++R L+
Sbjct: 2 DLKVYLKEKIALVDAALEQYLPKEE-----ERPQSLHKAMRYSIFAGGKRVRPVLMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
A+ A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+G
Sbjct: 57 EAVGGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNI-----RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
LLT AF+++S P+ + + + G+ G M +D V
Sbjct: 117 LLTEAFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + +GA++ A + +R +GE G+ FQ+ADD+LD E
Sbjct: 177 QYIHAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTE 234
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L L + I+ L + + L S++ Y+L GGK++R LV
Sbjct: 1 MTSNLNEFLTTRKQTIEDYLFTYVQEL------TIPKDLKSSMLYSLKAGGKRLRPVLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + N + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++A
Sbjct: 55 ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ LLT +F +I S + + + + +++ L + G GM+GGQ D++ E + +
Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTG L+ F+ +GA++A AS ++ E+LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LEYIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + I+ LD S + +L A+RY LL GGK++R +
Sbjct: 44 FDFKSYMINKITSINEALD-------SAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAA 96
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + T + A E IH S++ DDLP MDN RRGK + H Y E ++A
Sbjct: 97 CELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVR 156
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQV 177
L A + + + + + + + G +G GQ+ D+ D + Q+
Sbjct: 157 SLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQL 216
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KTG L + SGAI+ AS+ E E+LR F + +G++FQ+ DD+LD
Sbjct: 217 EHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVT 270
>gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16]
gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16]
Length = 295
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 135/237 (56%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ + L+E + +D L + + + + RL A+ Y+L GGK++R L+
Sbjct: 1 MSALFQTFLEEARQLVDKKLPEYVRELEAE------HRLKEAMLYSLEAGGKRVRPVLLL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+N L L AIE +H YSL+HDDLP+MD+ +RRG+PT H + E TAI+A
Sbjct: 55 AVLEAYNQPILHGLDTACAIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ LLT +F +I++ L + ++ +L+ G GM+GGQ+ D+ E Q+
Sbjct: 115 GDALLTQSFALIANADAPLSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ K KTG L+ F+ E+GA++A S E+ +L FG+ +G++FQ+ DD+LD E D
Sbjct: 175 ANVHKRKTGELLAFSIEAGALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGDS 231
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 121/235 (51%), Gaps = 12/235 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + L E + D LD + + +++ A+RY+LL GGK++R L
Sbjct: 16 FNLYAYLGERQQLCDAALD-------KSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLAT 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP+MDN RRGK T H Y E AI+AG+
Sbjct: 69 CEMIGGTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGD 128
Query: 122 GLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
GLL +FE +++ Q + Q++ + G G++GGQ++D+ E +
Sbjct: 129 GLLALSFEFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETL 188
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KT AL+ + G I+A AS + ++L C+ +N+G+ FQ+ DD+LD
Sbjct: 189 NFIHNHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITA 243
>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 307
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 103/248 (41%), Positives = 145/248 (58%), Gaps = 12/248 (4%)
Query: 1 MNG----GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRS 55
M +L + ++ + +L +LL + RL+ ++RY+ L GGK++R
Sbjct: 1 MTATALTDFTQRLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRP 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
FLV E A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ T
Sbjct: 61 FLVVESAAVFGVPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDAT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEF 171
AI+AG+ LLT AF+II+ + +R L +L G+ GM GGQ+ + +
Sbjct: 121 AILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGD 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
V +Q+MKTGAL+ F C +GA++ AS E + L +G LG FQ+ADDLLD E
Sbjct: 181 SGPVDVARVQQMKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVE 240
Query: 232 ED---LPK 236
D L K
Sbjct: 241 GDAATLGK 248
>gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 308
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 145/243 (59%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+L ++ + +L LL + RL+ AIRY+ LGG K++R FL E
Sbjct: 7 TIDFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A++F ++ AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG
Sbjct: 67 SAAVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LLT+AF+I++ + +R L L GL GM+GGQM + + +
Sbjct: 127 DALLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ + C +GAI+ AS ++ L +G LG FQ+ADDLLD E D
Sbjct: 187 VARLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K+++ L+ +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRKLEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + + FG+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
Length = 289
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 123/230 (53%), Gaps = 8/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L E +++ L+ + + + DRL A+ Y+L GGK++R L+ + V
Sbjct: 4 LTEWKTQVEQALETFMNRLEA------PDRLREAMLYSLDAGGKRVRPALIYAVLDAYGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL-LTY 126
+ T AA+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG+ L
Sbjct: 58 DRKTGDATAAALEMIHTYSLIHDDLPAMDDDDMRRGRPTNHIEFDEATAILAGDALLTNA 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
++ + + + + G+ G ML + D ++ I + KTG
Sbjct: 118 FTCLLETMAAAEVKVKLLERLAAAAGAAGMVGGQLDDMLGERGGISDAEELESIHRRKTG 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ FA E+G I+A + + E+L+ +G +LGI FQ+ DD+LD D K
Sbjct: 178 ALLIFAVEAGGILAGVADEDLEQLKRYGRHLGIAFQIQDDILDVTGDADK 227
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+N L +E + ++ L L + + + RL ++RY+L GGK++R L+
Sbjct: 4 LNTMLKEIWKERQQLVEKQLVKELEK-----EPPLDARLAESMRYSLMAGGKRLRPILLM 58
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L A+E IH YSLIHDDLP+MDN RRGK T H + + A++A
Sbjct: 59 AAADAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLA 118
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ LLT AFE+I + + + ++ G+ GM+GGQ +D + I Q+
Sbjct: 119 GDALLTLAFEVIGRQQ-HTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQL 177
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL A SGAI+A AS+ + L + E G+ FQ+ DD+LD D
Sbjct: 178 RKMHMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEA 235
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 12/242 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L L I++ L+ + D++ ++ Y+L GGK+IR L
Sbjct: 44 SFSLDEYLASKIGPIESALEASVKSRIPQT-----DKICESMAYSLMAGGKRIRPVLCIA 98
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F + A+ A+E IH SLIHDDLPSMDN +RRGKPT H+ + E AI+AG
Sbjct: 99 ACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAG 158
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
+ LL+ +FE ++ + ++ L ++G +G+ GGQ++D++ E +
Sbjct: 159 DSLLSTSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDL 218
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
I KT L+ A SGA++ A+ E F N+G+ FQ+ADD+LD DL
Sbjct: 219 KWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDL 278
Query: 235 PK 236
K
Sbjct: 279 GK 280
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 12/240 (5%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M + L + ++ LDD L + + L A+RY+LL GGK++R L
Sbjct: 1 MTAEFDFKAYLGKAKDTVEAALDDSL-------GPERPESLRDAMRYSLLAGGKRLRPIL 53
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L A+ A+E IH SLIHDDLP+MD+ +RRG+PT H Y E AI
Sbjct: 54 CLAACELAGGEAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAI 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+AG+ LLT AFE+++ + +++ L+ G G++GGQ++D + + +D
Sbjct: 114 LAGDALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTGAL+ +GA++ +A LR + +G+ FQ+ DD+LD
Sbjct: 174 TLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSE 233
>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 308
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 143/243 (58%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+L ++ + +L LL + RL+ AIRY+ LGG K++R FL E
Sbjct: 7 TIDFAKRLDATAEDTEALLGRLLSDDLLPDEIARPRRLMEAIRYSTLGGGKRLRPFLAVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A++F V+ AL VGAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG
Sbjct: 67 SAAVFGVDRAGALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LLT AF+II+ + +R L L GL GM+GGQM + + +
Sbjct: 127 DALLTLAFDIITRDEVHQDAKVRLDLNRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ + C +GAI+ AS + L +G LG FQ+ADDLLD E D
Sbjct: 187 VARLQQMKTGALLRYGCVAGAILGQASPEHYKALDDYGRALGEAFQIADDLLDVEGDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 8/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + E + +L +L Q RL A+RYA+L GGK++R L
Sbjct: 2 MTADFSAWAAERQAAFEEVLRRVLPQ-----PEVSPQRLHQAMRYAVLEGGKRVRPLLAF 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + V A++E IH YSL+HDD+P MD+ +RRGKPT H+QYDE TA++
Sbjct: 57 AAGELTGADIARVDIVAASVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLV 116
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
G+ L T AF++++ + + ++ L G +GM GGQ +D+ ++
Sbjct: 117 GDSLQTLAFQLLTEHRLSDGPQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPEL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA S + L + + +G+ FQ+ DD+LD E D
Sbjct: 177 ENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTA 234
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 131/239 (54%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L S + E ID L + + + L ++ Y++ GGK+IR L+
Sbjct: 1 MTTNLRSFMTEYKAIIDKELVEQIDYLS------IPTSLKESMIYSVSAGGKRIRPVLLL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + ++ A+E +H YSLIHDDLPSMD+ +RRGKPT H + E TAI+A
Sbjct: 55 ATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ LLTY+FE+I+S K L + +L+ G +GM+GGQ ++ + + + ++
Sbjct: 115 GDALLTYSFEVIASMKDILP-QTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEEL 173
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG L+ +A +GAI+ AS+ E + + E++G+ FQ+ DD+LD E K
Sbjct: 174 EYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDK 232
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++E + ++ LD + L A+RYALL GGK++R L
Sbjct: 59 FNFKAYMEERAVAVNRALDAAIPA------GGLPAALHDAMRYALLAGGKRVRPALCLAA 112
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+
Sbjct: 113 CAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 172
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL+ +F ++S + + + IG G + +
Sbjct: 173 ALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQ 232
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + I KT AL+ + GAI+ + + E LR + ++G++FQ+ DD+LD
Sbjct: 233 TVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDV 292
Query: 231 E---EDLPK 236
E+L K
Sbjct: 293 TKSSEELGK 301
>gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
Length = 308
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 104/244 (42%), Positives = 147/244 (60%), Gaps = 8/244 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
++ +L + + + +L LL + RL+ AIRY+ L GGK++R FLV
Sbjct: 6 LSADFVQRLDQTADDTEALLARLLSDQLLPDEIARPRRLMEAIRYSSLAGGKRLRPFLVV 65
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+A
Sbjct: 66 ESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHRAYDDATAILA 125
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDET 175
G+ LLT AF+II+ + +R L +L G+ GM+GGQM + + +
Sbjct: 126 GDALLTLAFDIITRDEIHSDAGVRLALTRALARASGIGGMVGGQMLDLAGEGRFGDREPV 185
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
V +Q+MKTGAL+ F C +GAI+ A++ + + L +G LG FQ+ADDLLD E D
Sbjct: 186 DVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDDYGRALGEAFQIADDLLDVEGDAA 245
Query: 234 -LPK 236
L K
Sbjct: 246 ALGK 249
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 15/242 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + ++ LD + T + +++ ++RY+LL GGK++R L
Sbjct: 97 FDFKKYMYSKAISVNEALD-------KAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAA 149
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH +LIHDDLP MDN +RRGKPT H + E TA++AG+
Sbjct: 150 CELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGD 209
Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL++AFE I+ ++ ++ R +++ L ++G +G++ GQ++DI E +
Sbjct: 210 ALLSFAFEHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTL 269
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ + SGAI+ AS+ E ER R + +G++FQ+ DD+LD E+L
Sbjct: 270 EYIHLHKTAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEEL 329
Query: 235 PK 236
K
Sbjct: 330 GK 331
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 123/243 (50%), Gaps = 15/243 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
P LQ + ++ +LDDLL + RL A+RYA+LGG K++R+ LV
Sbjct: 7 AFPEWLQGRVQHVEDVLDDLLPPADAL-----PSRLHEAMRYAVLGGGKRVRAALVYAAG 61
Query: 63 SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
V+ R AA+E IH YSL+HDDLP MD+ +RRG+PT H+++DE TA
Sbjct: 62 QACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATA 121
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++AG+ L AF++++S +++ L+ L + +
Sbjct: 122 MLAGDALQPLAFDLLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRDE 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 182 LQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTS 241
Query: 234 LPK 236
L K
Sbjct: 242 LGK 244
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 7/230 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + E ++ LD L+ T R+ A+RY+L GGK++R LV
Sbjct: 2 IEAYFAEKVPEVNRWLDRLMP-----PATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F V A E +H YSLIHDDLP+MDN +RRG PT H Q+DE TAI+AG+GL
Sbjct: 57 AFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQK 182
+T+AF I++ + +R L++ + G + + + + I +
Sbjct: 117 MTHAFRILAEMDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGAL+ A G I+A A++++ L +G+ +G+ FQ+ADD+LD
Sbjct: 177 AKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETA 226
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 11/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
N L + L E + ++ L+ + + + +IRY+L GGK+IR L
Sbjct: 7 NFNLLTYLYERKEIVEDTLN-------KSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L AL A+E IH SLIHDDLP+MDN RRGKPT HI Y E AI+AG
Sbjct: 60 SCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+ LL YAFE I++ + ++ +++ + H++ G++GGQ++D+ E +T +
Sbjct: 120 DALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETL 179
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ A SGA++A A + + R + +N+G+ FQ+ DD+LD K
Sbjct: 180 NFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEK 238
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L + ++ LD LL + + A+RY+LL GGK+IR L A
Sbjct: 2 DIKQYLNHRCQEVEQALDQLLPPIEGPLAGH-----VEAMRYSLLAGGKRIRPILCLAAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V AA+ECIH YSLIHDDLP+MD+ +RRG PT H ++ E AI+AG+G
Sbjct: 57 EALPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVF 178
LL++AFE+++ P + QL L + M + I+ Q+
Sbjct: 117 LLSFAFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQ 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A +SGAI A + + E L +GE +G+ FQ+ DDLL+ D L
Sbjct: 177 QIHRCKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
+ + + ++ LD + + +L ++RY+ L GGK++R L
Sbjct: 86 VEFDFNKYMHAKAISVNQALDR-------AVPLRFPQKLHESMRYSILSGGKRVRPVLCI 138
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ + AIE IH +L+HDD+P +DN IRRGKPT H + E TA+IA
Sbjct: 139 AACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIA 198
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDET 175
G LL+ AFE I+ ++ ++ +++ L G QG++GGQ + D ++
Sbjct: 199 GVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQ 258
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KT L+ + GAI+ AS++E ER+R + +GI+FQ+ DD+LD E
Sbjct: 259 TLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSE 318
Query: 233 DLPK 236
+L K
Sbjct: 319 ELGK 322
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+ KRIDT L +LL + L A+ Y+L GGK+IR L
Sbjct: 2 SFRTSLESRKKRIDTRLAELLQTSTPEFSG-----LYEAMNYSLNAGGKRIRPVLFLAVL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L + A+EC+H YSLIHDDLP+MDN RRGKPT H Y + TA++AG+G
Sbjct: 57 EAAGTDPDAFLDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180
LLTYAFE++++ I Q + H G GM+GGQ D+Q E T+ + ++
Sbjct: 117 LLTYAFELMAAQSAAPAHKI-LQAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KTG + + A++A + L +G+ LG+ FQ+ DD+LD K+
Sbjct: 176 HRSKTGVIFTAIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVG-SEKE 231
>gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
Length = 312
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 145/241 (60%), Gaps = 8/241 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L + + +LD LL + + + RL+ A+RY+ L GGK++R FLV A
Sbjct: 13 DFSKLLDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASA 72
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++FNV AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++DE TAI+AG+
Sbjct: 73 AIFNVPREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDS 132
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----IQDEFIDETQVF 178
LLT AF+II+ + +R L +L G+ GM GGQ++D + + V
Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+Q+MKTGAL+ + C +GA++ AS+++ L +G G FQ+ADDLLD E D L
Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGDAAALG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 121/242 (50%), Gaps = 15/242 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + ++ L+ + ++ +++ A+RY+LL GGK+IR L
Sbjct: 89 FDFKEYLHSKAISVNEALER-------AVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAA 141
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ A+E IH SLIHDDLPSMDN +RRGK T H + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGD 201
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL----THNIGLQGMLGGQMLDIQDEFIDETQV 177
LL++AFE I+ + + R ++S + G+ G + D + +
Sbjct: 202 ALLSFAFEHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETL 261
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT L+ A SGAI+ AS+NE ER + +G++FQ+ DD+LD E+L
Sbjct: 262 EWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEEL 321
Query: 235 PK 236
K
Sbjct: 322 GK 323
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LDD + ++ + A+RY+LL GGK++R L
Sbjct: 71 FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ A+E IH SLIHDDLP MDN +RRGKPT H + + A++AG+
Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGD 183
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ T + + L IG +G++ GQ++D+ +
Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ S ++ E+LR F +G++ Q+ DD+LD E+L
Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELG 303
Query: 236 K 236
K
Sbjct: 304 K 304
>gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 304
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 117/241 (48%), Positives = 165/241 (68%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 121 ILAGDSLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GA++A + ++ RLR FGE +G+ FQLADD+LD D
Sbjct: 181 AGIIRLQAMKTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSDA 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV
Sbjct: 9 ADWLRERAQHVEHVLDELLP-----GADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 65 FNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++
Sbjct: 64 CPVNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAML 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L AFE+++ +++ +L+ L + ++
Sbjct: 124 AGDALQPLAFELLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240
>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
Length = 300
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M ++ +R++ ++ L Q + +L SA+RY+++GG K++R LV
Sbjct: 1 MTVAFKDWVKACQQRVEKAAENNLPQ-----EALIPQKLHSAMRYSVIGGGKRVRPLLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+++ + A+EC+H YSLIHDDLP MDN +R GKPT H + E A++A
Sbjct: 56 AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHTAFGEAVAMLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L AF + K + I+ +L+ + G+ G + + ++ + ++
Sbjct: 116 GDALQPEAFLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEELR 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDCEEDLP 235
++ MKTGAL+ + GA + ++ + +L +G +G+ FQ+ DD+LD D
Sbjct: 176 LMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTA 234
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L + ++ + + + ++ + A+ YA+ GGK++R LV E A
Sbjct: 7 TFEGELADKKAYVEKFMREFMPPENAY-----PQVIHRAMHYAVFNGGKRLRPILVLESA 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AL V A+E IH YSL+HDDLP+MD+ +RRGKPT H + E AI+ G+
Sbjct: 62 QVVGKDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDA 121
Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
LLT AFEI+++ ++ ++++ +G GM+GGQ L+++ + D +
Sbjct: 122 LLTLAFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKDTDFFTLK 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL +GA++ + L + EN G+ FQ+ DD+LD E D
Sbjct: 182 TLHSKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGDEK 238
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ E + ++ LD+ ++ + + A+RY+LL GGK++R L
Sbjct: 70 FDFKVYVAEKAICVNRALDEAIM-------VKDPPMIHEAMRYSLLAGGKRVRPMLCFAA 122
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L N A+ A+E IH SLIHDDLP MD+ +RRGKPT H Y E A++AG+
Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL +AFE +++ + + + L ++G +G++ GQ+ D+ +
Sbjct: 183 ALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
I KT AL+ + GAI+ + E ++LR F +G++FQ+ DD+LD +L
Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELG 302
Query: 236 K 236
K
Sbjct: 303 K 303
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
Length = 296
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 135/239 (56%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+I ++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEE 233
>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 305
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 101/234 (43%), Positives = 137/234 (58%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
L L + +D D L + RL A+RY+ + GGK++R LVT AS
Sbjct: 14 LKDALVRIQQEVDACFDATLP-----VPEDPRARLYEAMRYSAIGGGKRLRPLLVTAVAS 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF V+ A+RVG A+E IH YSLIHDD+P MDN +R GKPTVH+ YD+ TA++AG+ L
Sbjct: 69 LFGVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAGDAL 128
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
AFEI+S P +R +L+ +L H G+ GM+GGQM+DI E V +Q
Sbjct: 129 QALAFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVTRLQ 188
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ A E GAI+ H + LR + N+G+ FQ+ DDLLD E D
Sbjct: 189 QLKTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGDEE 242
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+NG L E K+ID L ++ +L A+ Y+L GGK+IR L+
Sbjct: 2 INGTLKHFFDEEKKQIDNRLPHIIENLN------IPVQLRDAMIYSLKAGGKRIRPMLLL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+N V AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+A
Sbjct: 56 ATLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+GLLTY+F++ISS DN++ L+ ++ G +GM+GGQ + + + Q+
Sbjct: 116 GDGLLTYSFQLISSSMLL-PDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTG L+ + ESGAI+A S+NE+ L F ++LGI FQ+ DD+LD E D
Sbjct: 175 QKIHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDES 232
>gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + ++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 70 FDFMSYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAA 122
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 123 CELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGD 182
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDET 175
LL++AFE ++S +++ + + L IG +G++ GQ++DI +
Sbjct: 183 ALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLE 242
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KT AL+ + G I+ S E ERLR F +G++FQ+ DD+LD +
Sbjct: 243 HLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQ 302
Query: 233 DLPK 236
+L K
Sbjct: 303 ELGK 306
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L + + K+++ LD +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRKLEEYINLSQKKVEKHLDGILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+F+ + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMFSEDKEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A L +G+NLG+ FQ+ DD+LD
Sbjct: 175 NEELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup]
gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup]
Length = 300
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 114/239 (47%), Positives = 156/239 (65%), Gaps = 6/239 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L ++ ++ LD LL + + L+ A+RY +L GGK++R FLV + A
Sbjct: 3 EFTTLLAKHGHTVEKRLDTLLSDQIQNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L V A+ECIHCYSLIHDDLP+MDN +RRGKPTVHI +DE TAI+AGN
Sbjct: 63 ALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLT+AFEII+ + L +IR +L+ SL + GL GMLGGQMLD++ E + +I
Sbjct: 123 LLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIITL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
Q MKT AL+ FAC++GAI+ +AS+ E+L FG LG+ FQL DDLLD + L K
Sbjct: 183 QHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTANTQTLGK 241
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 11/241 (4%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + LQ+ +R++ L + + + + A+ Y+L GGK+IR L+
Sbjct: 1 MNRAEVEQFLQQQKQRLEESLPHYIARLNA------PGTIKRAMSYSLEAGGKRIRPLLL 54
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+
Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114
Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ ++ + + +
Sbjct: 115 AGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLE 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I + KTG ++ ++ +GA++A A + L F +LG+ FQ+ DD+LD E
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEE 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ +K ++ L+ + +Q + ++ ++RY+LL GGK++R L
Sbjct: 2 FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 54
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+
Sbjct: 55 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
LL++AFE +++ +++ L +IG +G++ GQ++D+ E + E +
Sbjct: 115 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ + E +LR F +G++FQ+ DD+LD
Sbjct: 175 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 227
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
LQ ++ I+ +LD+ L + RL A+RYA+LGG K+IR+ LV
Sbjct: 7 AFADWLQGRAQHIEAVLDECLPAADAL-----PARLHEAMRYAVLGGGKRIRAALVYAAG 61
Query: 63 SLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
VN + R AA+E IH YSLIHDDLP MD+ +RRG+PT H+Q+DE TA
Sbjct: 62 QACPVNGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATA 121
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++AG+ L AFE+++ +++ L+ L + + +
Sbjct: 122 MLAGDALQPLAFELLADMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDE 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + MKTGA++ + G I++ AS + ++ L + + +G+ FQ+ DD+LD D
Sbjct: 182 LQTMHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSA 240
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L L + + + +L++ L+ + N L+ A+RY+LL GGK++R LV
Sbjct: 1 MSTELTHFLAKYREHTNGLLEERLIGLKHY-----NTDLIEAMRYSLLLGGKRVRPVLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A AIE IH YSLIHDDLP+MD+ +RRG+PT HI Y E TAI+A
Sbjct: 56 AAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-F 178
G+ L AFE +++ + + + +LG + + + Q
Sbjct: 116 GDALQCQAFEWLANSQHMPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHLE 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ + E GAI A A+ + +LR + +G+ FQ+ DD+LD +
Sbjct: 176 TMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTANTA 232
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 8/240 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
L + + + ++ L L + DRL A+RYA+LGG K++R LV
Sbjct: 20 TLQAWMHACAAHVEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGGKRVRPLLVYAAG 79
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A+E IH YSL+HDD+P+MDN +RRGKPTVH QY E A++ G+
Sbjct: 80 ELVGADARVLDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQYGEAMAMLVGDA 139
Query: 123 LLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
L AFE++ +P Q + ++ L G GM GGQ ++ + Q
Sbjct: 140 LQALAFEVLVAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQALDIEGVGLRLSRPQ 199
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + KTGA++ + E G + + E ++ +G +G+ FQ+ DD+LD D
Sbjct: 200 LEAMHRAKTGAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSA 259
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
Length = 303
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV
Sbjct: 9 ADWLRERAQHVEHVLDELLP-----GADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 65 FNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++
Sbjct: 64 CPVNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAML 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L AFE+++ +++ +L+ L + ++
Sbjct: 124 AGDALQPLAFELLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240
>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
Length = 300
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M ++ +R++ ++ L Q + +L SA+RY+++GG K++R LV
Sbjct: 1 MTVAFKDWVKACQQRVEKAAENNLPQ-----EALIPQKLHSAMRYSVIGGGKRVRPLLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+++ + A+EC+H YSLIHDDLP MDN +R GKPT H + E A++A
Sbjct: 56 AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHAAFGEAVAMLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L AF + K + I+ +L+ + G+ G + + ++ + ++
Sbjct: 116 GDALQPEAFLFLVRTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEELR 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDCEEDLP 235
++ MKTGAL+ + GA + ++ + +L +G +G+ FQ+ DD+LD D
Sbjct: 176 LMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTA 234
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ + + + LD + + ++ ++RY+LL GGK++R L
Sbjct: 91 VEFDFNKYMLSKAMAVTEALD-------KAIPHSYPQKIHESMRYSLLAGGKRVRPVLCI 143
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A+ A+E IH SLIHDDLP MDN +RRGKPT H + + TA++A
Sbjct: 144 AACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLA 203
Query: 120 GNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+ L + I++ + + + + L G QG++GGQ++DI E +
Sbjct: 204 GDALHAFAFEHIVAFTSKSVGSDGILRAVTELARATGPQGIMGGQIVDIASERDAFVDLQ 263
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L A GAI+ AS +E ER+R F LG++FQ+ DD+LD E
Sbjct: 264 TLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSE 323
Query: 233 DLPK 236
DL K
Sbjct: 324 DLGK 327
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
L+E ++ ++ +LD+LL RL A+RYA+LGG K++R+ LV
Sbjct: 9 ADWLRERAQHVEHVLDELLP-----GADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQA 63
Query: 65 FNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
VN T R AA+E IH YSL+HDDLP MD+ +RRG+PTVH+Q+DE TA++
Sbjct: 64 CPVNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAML 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L AFE+++ +++ +L+ L + ++
Sbjct: 124 AGDALQPLAFELLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L+ + + I+ + + + +T ++ A+ Y+L GGK++R L E
Sbjct: 2 DFKEELKIRANYAEEIIKKYMPEEVGYQKT-----IMEAMNYSLSSGGKRLRPVLTLEAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+ AAIE IH YSLIHDDLP++DN +RRG+ T H + E AI+AG+
Sbjct: 57 RIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDA 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L ++ + + + G+ GM+GGQ++D+Q E + +
Sbjct: 117 LLNFAYETMLKESIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KT A+M +GA + A + + E + + +G+ FQ+ DD+LD D K
Sbjct: 177 IHENKTAAMMVGCMRAGAAIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAK 233
>gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255]
Length = 308
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 143/243 (58%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ +L + + +L+ LL + RL A+RY+ L GGK++R FLV E
Sbjct: 7 SADFAIRLDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLRPFLVVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+++F V AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ TAI+AG
Sbjct: 67 SSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQ 176
+GLLT AF+II+ + +R L +L G+ GM+GGQ + +
Sbjct: 127 DGLLTLAFDIITRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ F C +GA++ ASQ + + L +G LG FQ+ADDLLD E D
Sbjct: 187 VARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDVESDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1]
gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1]
Length = 288
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF + L
Sbjct: 2 EVEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCF 191
+T+L R +L+ +LT GL GM GGQ LD+ E + +I Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
ACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225
>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
Length = 300
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 148/240 (61%), Gaps = 11/240 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L S + E ++ ++ + LL T R+ A+RY L GGK++R FLV +
Sbjct: 7 SDLKSAMAEIAQAVELKIGALLPTTDLP-----EARVFEAMRYGCLNGGKRLRPFLVMQS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++LF VN A+R AA+E +H YSL+HDDLP+MD+G +RRG+PT H Q+DE TAI+AG+
Sbjct: 62 SALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGELRRGRPTCHRQFDEATAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
GLLT AFE+++ P T NIR QL+ +L G GM+GGQMLD+ E
Sbjct: 122 GLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGGHGMVGGQMLDLIAEHETFDLGTTTR 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+Q++KTG ++ F+CE+G I+ AS ++ LR + +LG+ FQ+ DDLLD E + K
Sbjct: 182 LQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYAHDLGLAFQIVDDLLDVEGTAEETGK 241
>gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 304
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 116/241 (48%), Positives = 165/241 (68%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +LD LL +A + + L A+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 121 ILAGDSLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GA+++ + ++ RLR FGE +G+ FQLADD+LD D
Sbjct: 181 AGIIRLQAMKTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSDA 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 15/239 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + L++ ++ I+T L +L+ + L A+ Y+L GGK+IR L+
Sbjct: 1 MT-DIKIYLKQKAELINTYLKNLIPK-------GTPKELFDAMEYSLTVGGKRIRPILII 52
Query: 60 ECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
E + N V+ + V ++E IH YSLIHDDLP+MD+ +RRGKPT H + E AI
Sbjct: 53 ESSKAVNPDVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAI 112
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+GLLTYAFE+IS + D + +++ +++++G+ GM+GGQ D + +
Sbjct: 113 LAGDGLLTYAFELISGNQKITPDKL-LKVINVISNSVGVYGMVGGQ---AGDILENFKDI 168
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT + C+ G I+A AS+ E E L+ +G +GI FQ+ DD+LD D K
Sbjct: 169 DFIHTHKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEK 227
>gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
Length = 297
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L+E +D L+ L + + A+RY++ GGK+IR L+
Sbjct: 2 DLKNYLKERCAIVDEALERSLP-----GEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AL A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+
Sbjct: 57 EAVGGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQV 177
LLT AF ++S + ++ + G +GM+GGQ M + ID V
Sbjct: 117 LLTEAFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGALM + ++GAI+ A + + +GE +G+ FQ+ADD+LD E
Sbjct: 177 QYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTE 234
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 13/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ K+++ L++ + QH ++ A+RY+LLG GK++ L
Sbjct: 22 FQFKEYMLTKLKQVNEALEE-------AVPLQHPIKIHEAMRYSLLGNGKRMCPILCIAS 74
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ + A+E +H SLIHDDLP MDN +RRGKPT H + E AI+AG+
Sbjct: 75 CELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGD 134
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LL+ AFE I+S + + + + L IG +G++ GQ +D + + + +
Sbjct: 135 ALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEY 194
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT L+ + GAIM A ERLR + ++G+++Q+ DD+LD E+L K
Sbjct: 195 IHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGK 254
>gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L+E +D L+ L + + A+RY++ GGK++R L+
Sbjct: 2 DLKGYLKERCALVDEALERHLPAED-----ELPSSVHRAMRYSVFAGGKRVRPILMLAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL A+E IH YSLIHDDLP+MD+ RRG+PT H + E AI+AG+
Sbjct: 57 DAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
LLT AF +ISSP + + G+ G M ++ ID V
Sbjct: 117 LLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + ++GA++ A+ + + + +GE +G+ FQ+ADD+LD E
Sbjct: 177 QYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTE 234
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 84/244 (34%), Positives = 132/244 (54%), Gaps = 16/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + +++ +D L+ L+ + + A+RY++ GGK++R L
Sbjct: 1 MSWDINQAIKD----VDEALERLIPAEDTF-----PQEIHRAVRYSVFAGGKRLRPLLTL 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +F V L AL AIE +H YSLIHDDLP++D+ RRG+ + H + + AI+A
Sbjct: 52 AAAEIFGVPRLHALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILA 111
Query: 120 GNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
G+ LLT AFE +++ +L +L G+ GM+GGQ++D + + ++
Sbjct: 112 GDSLLTLAFETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAAT 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ I + KTGAL +SGAIM AS E +RL F +N+G+ FQ+ DD+LD D
Sbjct: 172 LDYIHRHKTGALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAA 231
Query: 234 LPKK 237
L KK
Sbjct: 232 LGKK 235
>gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
Length = 301
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 6/239 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L ++ +++ L LL + + + L+ A+RY +L GGK++R FLV + A
Sbjct: 3 EFTTLLAKHGHTVESRLSTLLSDHIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L V A+EC+HCYSLIHDDLP+MDN +RRGKPTVH+++DE TAI+AGN
Sbjct: 63 ALFDIPVEHSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
LLT+AFEII+ L + R + L+ + +G L+ + + + T + +
Sbjct: 123 LLTFAFEIIAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDIITL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
Q+MKT AL+ FAC++GAI+ +ASQ +L FG LG+ FQL DDLLD + L K
Sbjct: 183 QRMKTAALISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDVTANTQTLGK 241
>gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
Length = 304
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 154/241 (63%), Gaps = 6/241 (2%)
Query: 1 MNGGLPSK---LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ + S L++N+ +++ +L LL + + RLL A+R+ +L GGK++R F
Sbjct: 1 MDSTISSFEHHLRDNAGKVEAVLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L N ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +D TA
Sbjct: 61 LVMETAALLGGNADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATA 120
Query: 117 IIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
I+AG+ LLTYAF+II++P+T + L LS IG L + DE
Sbjct: 121 ILAGDSLLTYAFDIIAAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDE 180
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ +Q MKTGAL+ FACE+GAIMA AS +++RLR FGE +G+ FQLADDLLD D
Sbjct: 181 QGITTLQAMKTGALIRFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTADA 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
Length = 293
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ +R++T L+ L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWTRSVLERVETALEHYLPA-----ETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAERLDAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF +++S L+L L + ++ + +
Sbjct: 117 LQSQAFVVLTSDVLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSA 230
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L++ +D LD + S L ++RY+L GGK++R L A
Sbjct: 32 NIKDYLEQKRLAVDCFLDQV-----SPPTATPPTTLHESMRYSLMAGGKRVRPILTIAAA 86
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ V ++E IH YSLIHDDLPSMDN RRGKPT H Y E AI+AG+
Sbjct: 87 EAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILAGDA 146
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---- 178
LLT AF++IS P+ Q+ + G M + ++
Sbjct: 147 LLTMAFDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLPTLQ 206
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I K KTG L+ A GA+ A A+ + + + + E++G+ FQ+ADD+L+ +L
Sbjct: 207 NIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNVTGTREELG 266
Query: 236 K 236
K
Sbjct: 267 K 267
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 115/236 (48%), Gaps = 6/236 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L LQ I+ L++LL + + T + A+ Y++ GGK++R L
Sbjct: 1 MNS-LEQSLQHAIPLINQRLEELLSPSDEPLLTT----IHEAMLYSVRAGGKRLRPLLCL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L + AIE IH YSLIHDDLP++DN +RRGKPT H Y E AI+A
Sbjct: 56 LTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL AFE++ IR ++ + + + + ID +
Sbjct: 116 GDALLNRAFEVLCQLPLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRY 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTG ++ S AI A+ + E +G N+G+ FQ+ADD+LD E D
Sbjct: 176 IHENKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEA 231
>gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + E ID LD LL + + + A+RY++ GGK++R L A
Sbjct: 5 SLNDYITEQCALIDAALDRLLPAED-----ESPETIHKAMRYSIFAGGKRMRPVLCLAAA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL A+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+
Sbjct: 60 EACGGLAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDA 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
LLT AF +I+ + +R + L G ++GGQ+LD++ E ++ +
Sbjct: 120 LLTEAFAVIAQVDDTERYTVR-DYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTV 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KT AL+ A G + A+A++++ E L FG NLG+ FQ+ DD+LD K
Sbjct: 179 YEGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEK 234
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 123/238 (51%), Gaps = 15/238 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + ++ ++ LD S + + ++ A+ Y+LL GGK++R L
Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIA 125
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 126 ACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185
Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID 173
+ LL+++FE ++S + + + + L IG +G++ GQ++DI +
Sbjct: 186 DALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I KT AL+ + GAI+ S +E ERLR F +G++FQ+ DD+LD
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303
>gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3]
Length = 300
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 105/232 (45%), Positives = 151/232 (65%), Gaps = 3/232 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L +++ ++ LD LL A + + + L++A+RY +L GGK+ R FLV + A
Sbjct: 3 EFTTLLAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH +DE TAI+AGN
Sbjct: 63 ALFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLT+AFEII+ + L+ +LT GL GM+GGQMLD++ E + + I
Sbjct: 123 LLTFAFEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q+MKT AL+ FAC++GAIM AS+ ++L FG +G+ FQL DDLLD
Sbjct: 183 QQMKTAALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLTS 234
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 12/242 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + Q ++ L L +T +D+L +++ Y+L GGK++R L+
Sbjct: 1 MGAEMKELWQSRRTLVERALQAELDRTD-----ILDDKLRASMAYSLMAGGKRLRPILLM 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A V+ + A+E IH YSLIHDDLP+MDN RRGK T H YDE TAI+A
Sbjct: 56 AAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ LLT AF +I + +++ G +GM+GGQMLD ++ I ++
Sbjct: 116 GDALLTLAFTVILRQQDV-PAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
+ KTGAL A GAI+A AS+ + L + ++ G+ FQ+ DD+LD D+
Sbjct: 175 RRVHMGKTGALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDI 234
Query: 235 PK 236
K
Sbjct: 235 GK 236
>gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 16/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD S + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD------VSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 117
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 118 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 177
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG +G++ GQ++D+ E ++ V
Sbjct: 178 ALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLE 237
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A GAIM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 238 RLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 297
Query: 233 DLPK 236
+L K
Sbjct: 298 ELGK 301
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L+ +++ L+ L + + L A+RY+LL GGK++R L
Sbjct: 9 FDFAAYLESARGQVELALEAAL-------GPERPESLREAMRYSLLAGGKRLRPILCLAA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP+MDN +RRG+PT H Y + AI+AG+
Sbjct: 62 CELAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
LLT AFE+++ + Q++ L+ G G++GGQ++D++ E D +
Sbjct: 122 ALLTRAFEMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEY 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ +GA++A A + + LR + +G+ FQ+ DD+LD
Sbjct: 182 IHLHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSE 237
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L S L R++ +L++ + + + +L A+RY+LL GGK++R L
Sbjct: 3 TFQLNSFLAAQQARVEALLNERVARLG---PSGTPPQLAEAMRYSLLAGGKRLRPVLCLA 59
Query: 61 CASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A L + A A+E +H YSL+HDDLP+MDN RRG+ T H Y E AI
Sbjct: 60 FADLVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAI 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ LLT AF +++S +++R+ L L G GM+GGQ+LD ++
Sbjct: 120 LAGDALLTEAFTLVASG----PESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDY 175
Query: 178 F-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ +MKTGAL+ AC G + + + R +G+ +G+ FQ+ADD+LD +
Sbjct: 176 LIRMHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAAE 235
Query: 234 LPK 236
L K
Sbjct: 236 LGK 238
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L L + + +D+ LD L+ ++ + + A+RY+L GGK+IR L E A
Sbjct: 7 DLRDYLAQQQRLVDSELDRLVPPESAA-----PETIHRAMRYSLFAGGKRIRPILCIEAA 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + ++E IH YSLIHDDLP++DN RRGK T H + + AI+AG+
Sbjct: 62 RTVSDDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDS 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQ 181
LLT AF++++ R L+ + G + + Q+ I
Sbjct: 122 LLTLAFQVLAQLDAPDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIH 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GAI A A++ + E L C+G+++G+ FQ+ DD+LD EE
Sbjct: 182 RAKTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSE 235
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
Length = 296
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 135/239 (56%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MKIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+I ++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI+++A++ ++E+L F +N+G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEE 233
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 7/235 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + LQ S+ I+ LD L+ + + L+ A RYALL GGK++R L
Sbjct: 3 DVANYLQTQSQLIEKRLDQLVSKRHGP-----HQNLIEAARYALLSGGKRLRPILALTTV 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AL +E IH YSLIHDDLP MDN RRGK TVH QY E A++ G+
Sbjct: 58 QTLHGDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDF 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-Q 181
LLTYAFE++++ K + + + + + G + + + +
Sbjct: 118 LLTYAFELLATDKYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLH 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KT AL+ + E G I+A+A++ + +R FGEN+G+ FQ+ DD+LD K
Sbjct: 178 RNKTAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAK 232
>gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653]
gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653]
Length = 288
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF + L
Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCF 191
+T+L R +L+ +LT GL GM GGQ LD+ E + +I Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
ACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225
>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 321
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 142/243 (58%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+L ++ + +L LL + RL+ AIRYA LGG K++R FL E
Sbjct: 20 TIDFAKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVE 79
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A++F V +AL VGAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H YD+ TAI+AG
Sbjct: 80 SAAVFGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAG 139
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LLT+AF+II+ + +R L L GL GM+GGQ+ + + +
Sbjct: 140 DALLTFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVD 199
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ + C +GAI+ A L +G LG FQ+ADDLLD E D
Sbjct: 200 VARLQQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGDAAA 259
Query: 234 LPK 236
L K
Sbjct: 260 LGK 262
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L S L + +D LD + + + A+R++L GGK++R L
Sbjct: 1 MSADLKSYLTQRVAFVDAALDRFVAAAETR-----PVTIHKAMRHSLFAGGKRLRPILCL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + AL A+EC+H YSLIHDDLP MD+ +RRG PT H + E A++A
Sbjct: 56 AAAEACGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L +FE+++ + + + ++L L G ++GGQ+ D++ E +
Sbjct: 116 GDALQALSFELVAQTPVTHRHS-PAAMVLELARTAGSLHLVGGQVADLEGEGKKLGIEDL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KT AL+ + + G + A A ++ + L FG G+ FQ+ DD+LD + K
Sbjct: 175 RYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEK 233
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + + + L + D L ++ Y+L GGK++R LV A
Sbjct: 8 SFKEYLAVTADAVSSALTEQFPAH-----WDIPDVLRESMNYSLTAGGKRLRPLLVIAAA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + AL V A+E +H YSLIHDDLP+MD+ RRGK T H Y E A++AG+
Sbjct: 63 EAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDA 122
Query: 123 LLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
LLT+AF I + + + ++ L+ G +GM+GGQ + + ++
Sbjct: 123 LLTHAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELE 182
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ F+ +G +A A +++ E LRCFG +LG+ FQ+ DD+LD D K
Sbjct: 183 YIHLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240
>gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 11/241 (4%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+
Sbjct: 1 MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+
Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114
Query: 119 AGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ ++ + + +
Sbjct: 115 AGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 13/228 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+++ LD+ + QH ++ A+RY+LL GGK++R L L + A+
Sbjct: 7 QVNKALDE-------AVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAM 59
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E IH SLIHDDLP MDN +RRG PT H + E TA++AG+ LL AFE ++
Sbjct: 60 PTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVAR 119
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + Q + L +G +G++ GQ ++ + + + + + I KT L+
Sbjct: 120 NTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEA 179
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
A GAIM A ERLR + ++G++FQ+ DD+LD E+L K
Sbjct: 180 AVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGK 227
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 11/241 (4%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + LQ+ +R++ L + + A+ + + A+ Y+L GGK+IR L+
Sbjct: 1 MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+
Sbjct: 55 FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114
Query: 119 AGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
AG+GLLTYAF++I+ ++ + +L+ L G +GM+ GQ ++ + + +
Sbjct: 115 AGDGLLTYAFQVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I + KTG ++ ++ +GA++A A+ + +L F +LG+ FQ+ DD+LD E
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 5/239 (2%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+L ++ + +L LL + RL+ AIRY+ LGG K++R FL E
Sbjct: 7 TIDFAKRLDSTAEDTEALLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A++F ++ AL VGAA+ECIHCYSLIHDDLP+MD+ +RRG+PT+H YD+ TAI+AG
Sbjct: 67 SAAVFGIDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+ LLT+AF+I++ + +R L L GL GM+GGQM + + +
Sbjct: 127 DALLTFAFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V +Q+MKTGAL+ + C +GAI+ A+ + L +G LG FQ+ADDLLD E D
Sbjct: 187 VAKLQQMKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESDAE 245
>gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498]
Length = 300
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 106/232 (45%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L ++++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A
Sbjct: 3 EFTTLLAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF+++ +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN
Sbjct: 63 ALFDISPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-- 180
LLT+AFEII+ R +L+ +LT GL GM+GGQMLD++ E + + I
Sbjct: 123 LLTFAFEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q+MKT AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD
Sbjct: 183 QQMKTAALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLDLTS 234
>gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19]
gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19]
Length = 288
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 150/224 (66%), Gaps = 3/224 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
++ L LL + + RL++A+R+ +L GGK++R FLV E A+LF L
Sbjct: 2 EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
RV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II+S
Sbjct: 62 RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCF 191
+T+L R +L+ +LT GL GM GGQ LD+ E + +I Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
ACE+GAI+A ASQ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 182 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 225
>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
Length = 290
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L + S I+ + L + ++L A+ Y+L GGK++R LV E A
Sbjct: 2 DVKHFLAKQSVFINEQIKRL-------TPSGIPEKLFDAMAYSLSAGGKRLRPILVLESA 54
Query: 63 SLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A E IH YSLIHDDLP+MD+ +RRGKPT HI Y E AI+AG+
Sbjct: 55 KAVGMEDIKDIVDIAVATEFIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
GL +YAFE+IS +T D + + + + G + ++ + I
Sbjct: 115 GLQSYAFELISKNRTVPPDKLLKVINILSHGTGIYGMVGGQAADILHEKENSFNDINFIH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT + C+ G ++A A++ E+ L+ +G +G+ FQ+ DD+LD D
Sbjct: 175 THKTAKFIQSCCQMGGVLADATEEEEISLKNYGLYIGLAFQIQDDILDEIGDE 227
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 15/243 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L
Sbjct: 71 SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 123
Query: 61 CASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++A
Sbjct: 124 ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 183
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ +L+ AFE I+ + +++ L +G QG++ GQ++DI E + +
Sbjct: 184 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDT 243
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD ++
Sbjct: 244 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 303
Query: 234 LPK 236
L K
Sbjct: 304 LGK 306
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+LQ + L D M+ +N L+ +++Y+L GGK++R L
Sbjct: 2 TFREQLQHYIDLTNEHLKDYFN-----MKEGYNQTLIESMKYSLFAGGKRLRPILSLASY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F + + IE IH YSLIHDDLP+MDN RRGK T H Y+E AI+AG+G
Sbjct: 57 QMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDG 116
Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
LL Y+FE++ Q + ++++ G+ GM+GGQ++D++ E +
Sbjct: 117 LLNYSFELMLENAIKQNDIYKHIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT AL+ + + GAI+A A + + + G NLG+ FQ+ DD+LD D K
Sbjct: 177 IHINKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAK 233
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 12/243 (4%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
MN + + E R+D+ L +L + + L ++ Y+L GGK++R L
Sbjct: 1 MNNRQPINQYMNEICDRLDSELTNLFP-----PSWKVPETLHKSMSYSLMAGGKRMRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + A+ V A+E +H YSL+HDDLP+MD+ RRGKPT H + E +AI
Sbjct: 56 VIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAI 115
Query: 118 IAGNG--LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFID 173
+AG+ + I +S + + ++ L G +GM+GGQ ++ +
Sbjct: 116 LAGDALLTHAFYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTT 175
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
Q+ I KT L+ F+ +G +A ++ + E LR FG ++G+ FQ+ DD+LD D
Sbjct: 176 LEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGD 235
Query: 234 LPK 236
K
Sbjct: 236 ESK 238
>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 297
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/246 (30%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
N + + + I+ +L L + N + +RY+ L GGK++R LV
Sbjct: 3 NIDFKKYILQKVEYINLVLKKFLPK--------DNSVVSQGMRYSVLAGGKRLRPVLVIL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A LF V + AIE +H YSLIHDDLP+MDN +RRG H ++ E AI+ G
Sbjct: 55 AAELFGVKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI------GLQGMLGGQMLDIQDEFIDE 174
+ LLT +F +I+ K+ K+ + +L+ + +L +++ +
Sbjct: 115 DALLTESFSLITKSKSSEKNINEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKILLG 174
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
++ IQ KT ALM + + GA++A A + + L +G+N GI FQ+ DD+LD D
Sbjct: 175 EKIKFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADK 234
Query: 234 --LPKK 237
L K+
Sbjct: 235 KLLGKE 240
>gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703]
Length = 306
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A+LGGK++R +LV
Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + D R ++ L H G+ GM GGQ L + +
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQTTLDDLEK 183
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A A + L + +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L E + ++ L + + + L A+ Y+L GGK+IR L+
Sbjct: 5 SVEQFLNEQKRAVEAALSSYMARLRG------PETLKKAMAYSLEAGGKRIRPLLLLATI 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+
Sbjct: 59 QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF++I+ ++ ++R QL+ L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEK 235
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 127/234 (54%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ S +Q I+ L+++ + + N L A+ Y+L GGK++R L+ A
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMAL-----NKDLAKAMNYSLMAGGKRLRPILIMAAAD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
V+ LR+ +IE IH YSLIHDDLP+MDN RRGK T H + E AI+AG+ L
Sbjct: 57 ALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LT AFEII++ K + +++ ++ G +GM+GGQ + +++ ID + +
Sbjct: 117 LTMAFEIIATDKNVDA-ETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL C A SGAI+A A + + L + G+ FQ+ DD+LD D
Sbjct: 176 AAKTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEK 229
>gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L E ID L+ L R++ A+RY+LL GGK++R L A
Sbjct: 2 DLKTYLSERKTLIDQALECYLP-----PGNGPGQRVVEAMRYSLLAGGKRLRPILCLAAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + V A+E IH YSLIHDDLP+MD+ RRG+PT H ++DE TAI+AG+G
Sbjct: 57 EAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKKFDEATAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLD--IQDEFIDETQVF 178
LLT AFE++++ T + T G QGM+GGQM D + + QV
Sbjct: 117 LLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQGMVGGQMADLLAEGQPSTLEQVE 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ + SGA++ S + L +GE G+IFQ+ DDLLD E +
Sbjct: 177 AIHRLKTGALLTASVRSGALLGGGSARDILALTHYGEKFGLIFQITDDLLDVEGESA 233
>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 293
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ +R++T L+ L +T L A+RYA+LGG K++R L
Sbjct: 2 TFEQWTRSVLERVETALEHYLPA-----ETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF +++S + L+L L + Q+ + +
Sbjct: 117 LQSQAFVVLTSDVLGVPQQASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ A L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTDSA 230
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 19/244 (7%)
Query: 5 LPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ KL+E K+++ L+ +L + + + + A+RY++ GGK++R L
Sbjct: 2 ISRKLEEYIYLSQKKVEENLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCL 54
Query: 60 ECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + + ++ +AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E A
Sbjct: 55 LSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDET 175
I+AG+ LL A E+ + + G++GM+GGQ++DI + D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIK 174
Query: 176 QVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ +C GA++A A + L +G+NLG+ FQ+ DD+LD
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIG 234
Query: 233 DLPK 236
D K
Sbjct: 235 DSKK 238
>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
Length = 296
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 103/238 (43%), Positives = 150/238 (63%), Gaps = 8/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L + + + ++++ +D LL + RL A+RY L GGK++R FLV
Sbjct: 1 MPKTLTAAMADTVEQVEAAIDVLLPRVDLP-----EARLFEAMRYGCLGGGKRLRPFLVM 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A LF VN ALR AA+E IHCYSL+HDDLP+MD+ +RRG+PT+H++YDE TAI+A
Sbjct: 56 ESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
G+ LLT AFEI++ P+T +R +L+ +L G +GM+GGQMLD+ D D +
Sbjct: 116 GDALLTVAFEILADPETHEDAQVRCRLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAI 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q++KTG L+ F+ +GAI+ AS + L+ + +LG+ FQ+ADDLLD E
Sbjct: 176 TRLQRLKTGELIAFSATAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEGTEA 233
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPSVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 12/244 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L + LQ R++T L+ + + +L A+ YA++ GGK++R L
Sbjct: 1 MTFDLHAYLQTAQFRVNTRLEYWFAKQNT-----TAAKLSEAMHYAVMNGGKRLRPVLAF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A A+E +H YSL+HDDLP+MDN +RRG PT HI +DE TAI+A
Sbjct: 56 AAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+ L AFE+++S + + I+ +++ SL G GM GGQ LD+
Sbjct: 116 GDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHG 175
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I ++KTG L+ A GA+ AHA ++ L + LG+ +Q+ DD+LD D
Sbjct: 176 LETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLT 235
Query: 234 LPKK 237
L K+
Sbjct: 236 LGKQ 239
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
Length = 367
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD + + L A+RYALL GGK++R L
Sbjct: 65 FDFKAYMGERAVAVNRALDAAVPA------GEPPAALHDAMRYALLAGGKRVRPALCLAA 118
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+
Sbjct: 119 CAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 178
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL+ +F ++S + D + + IG G + E
Sbjct: 179 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 238
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++ I KT AL+ + GAI+ + + ERLR + ++G++FQ+ DD+LD
Sbjct: 239 TVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 298
Query: 231 E---EDLPK 236
E+L K
Sbjct: 299 TKSSEELGK 307
>gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380]
gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380]
Length = 296
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
L + L+E ++D LD L + L A+RY+ GK+IR L+
Sbjct: 2 DLNAYLKERRAQVDKALDTYLP-----GEDVLPISLHKAMRYSTFAAGKRIRPILMMAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+E IH YSLIHDDLP+MD+ RRG+PT H Y + AI+AG+
Sbjct: 57 EAVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
LLT AF ++S ++ + ++ + G GM+GGQ +D + + ID +
Sbjct: 117 LLTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLE 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + +SGA++ AS + + L + + G+ FQ+ADD+LD D
Sbjct: 177 YIHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQE 233
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
Length = 297
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L E + ++ L + + + L A+ Y+L GGK+IR L+
Sbjct: 5 SVEQFLNEQKRAVEAALSSYMARLRG------PETLKKAMAYSLEAGGKRIRPLLLLATI 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L V AIE IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+
Sbjct: 59 QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118
Query: 123 LLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF++++ +R QL+ L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTG ++ ++ +GA++ A + L F +LG+ FQ+ DD+LD E K
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEK 235
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 10/242 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L + + S +++ L+ +H R+ A+RY+L+ GGK+IR LV
Sbjct: 1 MNPALQEFINDTSLQVNRCLE-----GWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +V + L A+ECIH YSLIHDDLP+MDN +RRGKPT HI +DE TAI+A
Sbjct: 56 AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
G+GL T AFE +S+ + + + + + G+ G + + + + +
Sbjct: 116 GDGLQTLAFEKLSTIEDPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTISHLE 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA ASQ + + L + + +G+ FQ+ DD+LD D L
Sbjct: 176 KIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTATLG 235
Query: 236 KK 237
K+
Sbjct: 236 KR 237
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 12/238 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ S L+E K +++ L L + RL ++ Y+L GGK++R L
Sbjct: 5 TEAMKSLLKERGKLVESYLATCLD------GQEMPPRLRESMLYSLQAGGKRLRPVLCLS 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
CA+L + L +AIE +H YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG
Sbjct: 59 CAALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQV 177
+ LLT AF + + + M G GM+GGQ D+ + ++
Sbjct: 119 DALLTDAFAHMCRVEL--PAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAEL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGAL+ +C GA++A A+ + ER+ +G LG+ FQ+ADD+LD D
Sbjct: 177 RRMHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSDTA 234
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 296
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894]
Length = 304
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 119/241 (49%), Positives = 165/241 (68%), Gaps = 6/241 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N+ I+ +LD LL + + L SA+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKHNAHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+LF + ALRVGAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALFGGDAGAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLTYAF+II++P+T L D ++ L+L+L GL GM GGQ LD+ E +
Sbjct: 121 ILAGDSLLTYAFDIIAAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI++ S +++ RLR FGE +G+ FQLADD+LD D
Sbjct: 181 AGIIRLQAMKTGALIRFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSDT 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ E S+ ++ L+D + + ++ A+RY+LL GGK++R L
Sbjct: 23 FNFNLYMVEKSRSVNQALND-------AVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAA 75
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ N TA+ +IE IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 76 CEVVGGNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGD 135
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVF 178
LL +AFE I+ + + + L +IG +G++ GQ++DI I ++
Sbjct: 136 ALLAFAFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLE 195
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + GAI+ E E+LR F +G++FQ+ DD+LD
Sbjct: 196 FIHLHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVT 248
>gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C]
Length = 300
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 103/232 (44%), Positives = 154/232 (66%), Gaps = 3/232 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L ++++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A
Sbjct: 3 EFTTLLAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L +G A+ECIHCYSLIHDDLP++DN +RRG+PTVHI +DE TAI+AGN
Sbjct: 63 ALFDIPPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
LLT+AFEII+ + +L+ +LT GL GM+GGQ+LD++ E + +
Sbjct: 123 LLTFAFEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATTTL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q+MKT AL+ FAC++GAIM AS+ +L FG ++G+ FQL DDLLD
Sbjct: 183 QQMKTAALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLDLTS 234
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 125/238 (52%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + + I+ L D L +T ++ L A+ Y+L GGK++R L+ A
Sbjct: 1 MKELWRNRQELIERALRDELAKTD-----ILDNTLREAMEYSLMAGGKRLRPILLMAAAD 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L A+E IH YSLIHDDLP+MDN RRGK T H Y + AI+AG+ L
Sbjct: 56 AVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
LT AF ++ K ++ +++ ++ G +GM+GGQ+LD+Q E ++ +
Sbjct: 116 LTLAFTVLLRQKDVPAVSL-LRVVDEISRAAGAEGMVGGQVLDLQAENKTISLDELRRVH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL A SGAI+ AS+ + L + ++ G+ FQ+ DD+LD D+ K
Sbjct: 175 MGKTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNAEDIGK 232
>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
Length = 295
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + ++ R+D L+ LL + +Q RL A+RY+++ GGK++R LV
Sbjct: 2 IAAYQKQCQARVDAALEALLQPPRAELQ-----RLYQAMRYSVVNGGKRVRPLLVYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGTPERAEGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGL 116
Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + +R ++ +L G GM+GGQ +D++ + +
Sbjct: 117 QALAFEVLTDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A + + L + +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTA 232
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ + R++ L+ L + RL A+RYA+LGG K++R L
Sbjct: 1 MSST-EDWVNALQARVEQALEKTLPPASKP-----PKRLHEAMRYAVLGGGKRLRPLLTY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
V +A+E IH YSL+HDDLPSMDN +RRG+PT H + E TA++A
Sbjct: 55 SAGMAVGVAEAALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
G+ L AF I++ P + + + ++ L G +GM GGQ +D+ I T ++
Sbjct: 115 GDALQALAFRILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEM 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA A +Q+ E+L F + +G+ FQ+ DD+LD E D
Sbjct: 175 ETMHRLKTGALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTA 233
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 10/235 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L++ ++I+ L + Q + A+ Y+L GGK+IR L+
Sbjct: 1 MERLLRQYKEQIEQQLPAYIESL------QAPQTIKEAMLYSLQAGGKRIRPLLLLSTLH 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + V A+E IH YSLIHDDLPSMDN +RRGKPT H + E AI+AG+ L
Sbjct: 55 AFRKPIDIGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
LTYAF++++ KT +++ +L+ L G +GM+GGQ+ D++ E Q+ I
Sbjct: 115 LTYAFQVVADDKTI-SSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIH 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG L+ ++ +GAI+ A++ + L F ++LG+ FQ+ DD+LD E D K
Sbjct: 174 RHKTGKLLQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQK 228
>gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
P LQ + ++ +LDDLL + RL A+RYA+LGG K++R+ LV
Sbjct: 7 AFPEWLQGRVRHVEDVLDDLLPPADA-----VPARLHEAMRYAVLGGGKRVRAALVYAAG 61
Query: 63 SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
V+ R AA+E IH YSL+HDDLP MD+ +RRG+PT H+Q+DE TA
Sbjct: 62 QACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATA 121
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++AG+ L AFE+++S +++ L+ L +
Sbjct: 122 MLAGDALQPLAFELLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDD 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 182 LQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSA 240
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 129/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ L S + + ++++ L D + + + + ++ Y+L GGK+IR L+
Sbjct: 1 MHQSLSSFSELHKEKLEIHLKDYVHKLNA------PPEVKESMLYSLEAGGKRIRPMLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ F + L AAIE +H YSLIHDDLPSMDN +RRGKPT H + E AI+A
Sbjct: 55 ASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILA 114
Query: 120 GNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ LLTY+F+ I+ + + L+ L+ G +GM+GGQ + + + +
Sbjct: 115 GDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADIKGEGKQLGLED 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KTG L+ + SGAI+A+ASQ + L F +LG+ FQ+ DD+LD E
Sbjct: 175 LEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRDDILDLEGTEE 233
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 296
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 306
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +RI+ L D + + L+ A+RY A+LGGK++R +LV
Sbjct: 9 DFNQQLAAHQQRINQALLDYIAPL-----PFGSSDLVEAMRYGAVLGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AAIEC+H YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P ++ D R ++ L + G+ GM GGQ L+ + I ++
Sbjct: 124 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 183
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A AS + L + +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGASGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F L A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGLGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7]
gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7]
Length = 304
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
P L + + I+ +LD +L Q +T + L A+RYA+LGG K++R+ LV
Sbjct: 7 DFPIWLDDRVQHIEAVLDQVLPQ-----ETVVPESLHEAMRYAVLGGGKRVRAALVYAAG 61
Query: 63 SLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ + AA+E IH YSLIHDDLP MD+ +RRG+PTVH+++ E T
Sbjct: 62 EAALQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEAT 121
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+ L AFE++ +++ +L+ + + + +
Sbjct: 122 AMLAGDALQPLAFELLGLMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALSKE 181
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
Q+ + MKTGA++ + G I+A A ++ L + +G+ FQ+ DD+LD D
Sbjct: 182 QLQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTADTV 241
Query: 234 -LPK 236
L K
Sbjct: 242 TLGK 245
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 17/243 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
S + + ++ LD S + + ++ AIRY+LL GK++R L
Sbjct: 53 FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
L+++AFE +++ + + L IG +G++ GQ++D+ +D+ V
Sbjct: 166 ALISFAFEHLATSTAV-SPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
I KT L+ A GAI+ S E E+LR F +G++FQ+ DD+LD E+
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284
Query: 234 LPK 236
L K
Sbjct: 285 LGK 287
>gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 17/243 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
S + + ++ LD S + + ++ AIRY+LL GK++R L
Sbjct: 53 FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
L+++AFE +++ + + L IG +G++ GQ++D+ +D+ V
Sbjct: 166 ALISFAFEHLATSTAV-SPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
I KT L+ A GAI+ S E E+LR F +G++FQ+ DD+LD E+
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284
Query: 234 LPK 236
L K
Sbjct: 285 LGK 287
>gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII]
gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
Length = 306
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A++GGK++R +LV
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSFANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L T AF I++ P + D R +++ L G GM GQ LD++ E +
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ + + + ++T L L T L A+RYA L GGK++R LV
Sbjct: 3 DTDFLRWMTDIQQHVETALAASLPA-----GTHAATPLFDAMRYAALDGGKRVRPLLVFA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ A+ECIH YSL+HDDLP MD+ +RRGKPT HI + E A++AG
Sbjct: 58 AGDVSGATPEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
+ L +AFE+++ P + + ++ +L H G +GM GGQ +D+ Q
Sbjct: 118 DALQAHAFELLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ +E L + +G+ FQ+ DD+LDCE D
Sbjct: 178 YMHCLKTGALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSA 234
>gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
Length = 337
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 10/245 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
P++L + ++ L++ L A + RL+ +R+A+LGG K++R FL E
Sbjct: 35 ADFPARLTAVADAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIET 94
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + AL G+ IE +HCYSL+HDDLP+MDN +RRGKPTVH +DE TAI+ G+
Sbjct: 95 ARMLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGD 154
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
LLT+AFEI++ P Q +R++L+L L GL GM+GGQ+LD+ E +
Sbjct: 155 ALLTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVD 214
Query: 181 -----QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
Q MKTGAL+ + ++GAI+ A +++ L +G LG FQ+ADD+LD E
Sbjct: 215 ATLQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDREASSE 274
Query: 235 --PKK 237
K+
Sbjct: 275 AMGKR 279
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii]
Length = 295
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 132/240 (55%), Gaps = 11/240 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++ + + ++ +D+LL + + +L+ +++Y++ GGK++R L E
Sbjct: 2 NFKELMEFDKQIVEKYMDELLS-----INVIYEKKLIESMKYSVQAGGKRLRPILFLETI 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L N N + + AIE IH YSLIHDDLP+MDN +RRGKPT H+ + E TAI+AG+G
Sbjct: 57 KLLNKNPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LL A EI+ + ++ + ++ G+ GM+ GQ ++ + + ID + I
Sbjct: 117 LLNLAHEIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KTGAL+ + + A+M+ A L+ + + +G+ FQ+ DD+LD E +L KK
Sbjct: 177 HSNKTGALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKK 236
>gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614]
gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614]
Length = 301
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 144/238 (60%), Gaps = 3/238 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L +K ++ L+ LL A + RLL+A+R+ AL GGK++R LV
Sbjct: 1 MTLDPNQHLTFQAKFVEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVM 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A+LF L+ A+E +HCYSL+HDDLP+MD+ +RRG+PTVH YDE TAI+A
Sbjct: 61 ETANLFGRADDGVLQAACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILA 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLT AF++I+ +R +L L G GM GGQMLD++ E + T+
Sbjct: 121 GDALLTLAFDVITGEAVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEI 180
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q MKTGAL+ +AC +GAI+A A + + +RL FGE +G+ FQLADDLLD E
Sbjct: 181 RQLQSMKTGALLRYACRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVEASAE 238
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
Length = 296
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
Length = 296
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L E K ID L + + D L A+ Y+L GGK++R L+
Sbjct: 1 MNEQLKGFFNEYRKLIDARLPSYIEDLRA------PDTLKQAMTYSLKAGGKRVRPLLLL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
FN + AIE IH YSLIHDDLP+MD+ RRG+PT H Y E AI+A
Sbjct: 55 ATLDGFNRPIEDGFDLACAIEMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ LLTY+FE+I+S ++ ++ + L G GM+GGQ ++ ++ + +
Sbjct: 115 GDALLTYSFELITSMSAVREEPAKALTLVRELAKASGPCGMVGGQVADIEGENRSLTVQE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTG L+ ++ +GA++A AS+ + E LR F LG++FQ+ DD+LD E D K
Sbjct: 175 LADIHHHKTGDLLAYSIIAGAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDK 234
>gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I+++A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953]
gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+]
gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia
pseudotuberculosis IP 32953]
gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 306
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A++GGK++R +LV
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L T AF I++ P + D R +++ L G GM GQ LD++ E +
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
12444]
gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
12444]
Length = 303
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 100/245 (40%), Positives = 140/245 (57%), Gaps = 15/245 (6%)
Query: 1 MNGG-------LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKK 52
M+ L L ++ ID D LL + DRL+ A+RYA + GGK+
Sbjct: 1 MSADTSEGPGLLKPALAAIAEDIDRSFDLLLP-----VPGDPRDRLVEAMRYAAIGGGKR 55
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+R LV +L V+ A+RVG AIE IH YSLIHDDLP MDN +R GKPTVH+ +D
Sbjct: 56 LRPLLVCATGALHGVSREAAVRVGTAIEAIHVYSLIHDDLPCMDNDGLRHGKPTVHVAFD 115
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDE 170
+ TA++AG+ L +AFE++S P T R +L+ +L G+ GM GGQM+DI +
Sbjct: 116 DATAVLAGDALHDFAFEVLSDPATSGDPFTRIELIRTLATASGMNGMCGGQMMDIVAETS 175
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
D V +Q++KTGAL+ + E GAI+ + LR + ++G+ FQ+ADDLLD
Sbjct: 176 SFDLPTVTRLQQLKTGALLGASVELGAILGKVPPEGRTHLRGYARDIGLAFQIADDLLDA 235
Query: 231 EEDLP 235
E D
Sbjct: 236 EGDEA 240
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 15/243 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L S LQ ++ LD+ L ++ D++ A+RY+LL GGK++R L
Sbjct: 32 SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 84
Query: 61 CASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + A+ A+E IH SLIHDDLP MDN +RRGKPT H + E TA++A
Sbjct: 85 ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 144
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L+ AFE I+ + +++ L +G QG++ GQ++DI E + + M
Sbjct: 145 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDM 204
Query: 180 ---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
I KTG L+ A GAI AS+ E R+R + + +G++FQ+ DD+LD ++
Sbjct: 205 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 264
Query: 234 LPK 236
L K
Sbjct: 265 LGK 267
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + + ++ ++ ++RY+ L GGK++R L L TA+ A+
Sbjct: 6 DSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAV 65
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH SL+HDDLP MDN +RRGKPT H+ + E A++AG+ LL +AFE+I++ T +
Sbjct: 66 EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVP 125
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
+ +++ L +IG +G++ GQ++DI E + + + I KT AL+ + G
Sbjct: 126 ADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLG 185
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
AI+ A+ E E+LR F +G +FQ+ DD+LD ++L K
Sbjct: 186 AILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGK 228
>gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
Length = 312
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 100/241 (41%), Positives = 142/241 (58%), Gaps = 8/241 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L + + +LD LL + + RL+ A+RY+ L GGK++R FL A
Sbjct: 13 DFNKLLDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVASA 72
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F+V AL GAA+ECIHCYSLIHDDLPSMDN +RRG+PT H ++D+ TAI+AG+
Sbjct: 73 AMFDVPRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGDS 132
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----IQDEFIDETQVF 178
LLT AF+II+ + +R L +L G+ GM GGQ++D + + V
Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+Q+MKTGAL+ + C +GA++ AS+ + L +G G FQ+ADDLLD E D L
Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGDAAALG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 296
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 109/235 (46%), Positives = 144/235 (61%), Gaps = 6/235 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+L++++ R++ LD+ L DRLL A+RY LGG K+ R FLV E A
Sbjct: 2 TFTERLEDHASRVERHLDEWLSTDK---LGAVPDRLLDAMRYGTLGGGKRFRPFLVIESA 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF V AL G+A+ECIHCYSL+HDDLP+MDN +RRG+PTVH +D+ TAI+AG+
Sbjct: 59 ALFGVPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDT 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
LLT AFEII+ T +R+ L L L G GM GGQMLD+ E + +
Sbjct: 119 LLTVAFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTL 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ + C +G I+ AS+ E L+ +G+ LG FQLADDLLD E D
Sbjct: 179 QAMKTGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGDAA 233
>gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
Length = 316
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 113/238 (47%), Positives = 155/238 (65%), Gaps = 3/238 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ + L + ++ L LL Q + +RLL+A+R+ +L GGK++R FLV
Sbjct: 16 LSTDFTAALNLRAMEVEMALTGLLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 75
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+A
Sbjct: 76 ESAALFGKGGDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 135
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLTYAF+I+SS +T L IR +L+ +L GL GM GGQ LD+ E + +
Sbjct: 136 GDSLLTYAFDIVSSDETDLDPAIRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGI 195
Query: 180 I--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I Q MKTGAL+ FACE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D
Sbjct: 196 ITLQAMKTGALIRFACEAGAIIANASTEDRERMAEFGSAIGLAFQLADDLLDVTADAE 253
>gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
Length = 293
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L+ L A+ L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLERVETALEHYLPGEATE-----PATLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + TQ+ + +
Sbjct: 117 LQSQAFVALTSEVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ +R++ L+ L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWTRSVLERVEAALEHYLPA-----ETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + Q+ + +
Sbjct: 117 LQSQAFVSLTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ A N L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L+E K I+ LD + + ++ ++ A+RY+ GGK+IR L + A
Sbjct: 3 NFEIELKEAGKIIEKALDFYIPK-----SNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + + IE IH YSLIHDDLP MDN RRGKPT H + + A++AG+
Sbjct: 58 ELFGLQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLDIQDEFIDETQV--F 178
LLT AF I ++++ + + + G GM+GGQ +DI + + + F
Sbjct: 118 LLTLAFNTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLF 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG L+ + +GA +A A ++ +L FGE +G+IFQ+ DDLLD D K
Sbjct: 178 YMDYHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKK 235
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ R++ L + + Q + L A+ Y+L GGK+IR LV E + +
Sbjct: 11 EAAQARVEEALRERVGQMGRYAD------LREAMEYSLMAGGKRIRPVLVLESCRMCGGD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL A+E IH YSLIHDDLP+MD+ +RRG+PT H+ Y E TAI+AG+GLLT AF
Sbjct: 65 PEVALPFACAVEMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + + + LSL + + + ++ +Q +KTGAL
Sbjct: 125 QTLTQAQLTAQQVVDAVACLSLAAGPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTGAL 184
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ A E G I A S ++E +R + + LG FQ+ DD+LD +L K
Sbjct: 185 IAAAAELGCIAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGK 235
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
S+L++ S I+ + L ++ + L SA+ Y+ GGK++R L+ E
Sbjct: 2 DFISELKKKSDFIEAEIYAYLP-----LEEGYQKTLFSAMNYSYKAGGKRLRPILIMESY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L L AAIE IH YSLIHDDLP++DN +RRGK T H + E AI+AG+G
Sbjct: 57 KLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDG 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
L I++ + ++ G+ GM+GGQ++D++ E + +
Sbjct: 117 LLNYAYEVILNHALNSSDQPSAIKACKAIADGAGIYGMVGGQVVDVESESKEIDLACLDF 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT A++ +SGA +A A + E+L +G LG+ FQ+ADD+LD E D
Sbjct: 177 IHLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADDILDIEGDEK 232
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 10/228 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLT 71
R++ LD L + +H RL A+RY+ L GGK++R LV
Sbjct: 21 RARVEQALDYWLPEAQTH-----PARLHQAMRYSALSGGKRLRPILVFATGQALGAAPTL 75
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ECIH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG+ L T AF I+
Sbjct: 76 LDGPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHIL 135
Query: 132 SSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGAL 188
+ ++++ R +++ L G +GM GGQ +D + +D Q+ + KTGAL
Sbjct: 136 AHDPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGAL 195
Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + GA+ A + +RL +G+ +G+ FQ+ DD+LD E +
Sbjct: 196 IRASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETE 243
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSY------ANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
Length = 295
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 129/236 (54%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L+ S I+ +L + + + +T + A+ Y+L GGK++R L E A
Sbjct: 2 AFKEDLKTKSAYIEDLLKQYMPKEEGYQKT-----IFEAMNYSLSSGGKRLRPILTLESA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AIE IH YSLIHDDLP+MDN RRGKPT H + + A +AG+
Sbjct: 57 KIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LL YAFEI+ ++ +IR + + + G+ GM+GGQ ++ +++ I++ ++
Sbjct: 117 LLNYAFEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDF 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT A++ +GAIM +A +++ + + + +N+G+ FQ+ DD+LD D
Sbjct: 177 IHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDEK 232
>gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
Length = 306
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 105/244 (43%), Positives = 143/244 (58%), Gaps = 8/244 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ +L E + LD LL + + RLL A+RY AL GGK++R FL E
Sbjct: 3 DQDFRRRLDEAAAATQATLDALLAPSPLEGEIARPARLLEAMRYVALGGGKRLRPFLALE 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A LF V +A R AAIE IHCYSL HDDLP+MD+ +RRG+PT H +DE TAI+AG
Sbjct: 63 SARLFGVCGESAARAAAAIEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQ 176
+GLLTYAF++++ P T IR++L+L+L GL GM+GGQ + + + +
Sbjct: 123 DGLLTYAFDVLADPATHADPLIRARLVLALARAAGLGGMVGGQALDLEAEKAAAPLTQEE 182
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+Q MKTGAL+ + GAI+ AS L +G+ LG FQ+ADD+LD E D
Sbjct: 183 TLRLQAMKTGALLRVCVDFGAILGGASAEVAAALGRYGDALGAAFQIADDILDAEGDEAA 242
Query: 234 LPKK 237
L K+
Sbjct: 243 LGKR 246
>gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + +Q RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
N + L+ ++ L +L L A+ ++L GGK++R L
Sbjct: 15 NFDFKAYLKARQTLVNERLGAILGSLDPR------RELTCAMGHSLMAGGKRLRPILCLA 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ AL A+E IH YSL+HDDLP+MDN +RRG PT H + E TAI+AG
Sbjct: 69 ACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAG 128
Query: 121 NGLLTYAFEIISSPKT----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+GLLT+AF+I+S P+ +R +L+ ++ G+ GM+ GQMLD+ + DET
Sbjct: 129 DGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETV 188
Query: 177 V-----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I +KTG ++ + +GA+ A A E L + E +G+ FQ+ DD+LD E
Sbjct: 189 TSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVE 248
Query: 232 ED 233
D
Sbjct: 249 GD 250
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + L E S + +D L S DRL AIRY+LL GK++R L
Sbjct: 1 MTSASLATLHEYSDTLRDEVDQALN-VYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTL 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A+ A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+A
Sbjct: 60 MAAETCGSDRTQAMPSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILA 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL A EI++ RS L+ L+ Q D +
Sbjct: 120 GDALLARALEIVADGYQDPLVAARSCRELAKAAGATALVGGQADDLNEQFGSGDVEMLKA 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I + KTGA++C + GAI A A + +L +GE +G+ FQ+ DDLLD D L K
Sbjct: 180 IHRRKTGAMICVSLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAALGK 239
Query: 237 K 237
+
Sbjct: 240 R 240
>gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
Length = 306
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/244 (34%), Positives = 131/244 (53%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ +L + +R++ L D + + L++A+RY A+LGGK++R +LV
Sbjct: 7 SADFQQQLAAHQQRVNQALLDFIAPL-----PFGDSDLVAAMRYGAVLGGKRLRPYLVYA 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG
Sbjct: 62 TGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAG 121
Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L T AF I++ + + R ++ L G+ GM GGQ L+ + I T +
Sbjct: 122 DALQTLAFSILAEANMPDVANKDRLSMIAELAKASGVAGMCGGQALDLEAEARQISLTNL 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL-- 234
I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D
Sbjct: 182 EQIHRYKTGALIRAAVRLGALAAGAPGRRALPLLDRYSEAIGLAFQVQDDILDVIGDTAT 241
Query: 235 -PKK 237
K+
Sbjct: 242 IGKR 245
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 15/243 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + L++ ++ +D +L+ + + + A+RY+L GGK+IR L A
Sbjct: 2 NIKNYLEQKRSLVEEAMDRFMLEESGPFKKH-----IEAMRYSLFAGGKRIRPILCLAAA 56
Query: 63 SLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
T V A+ECIH YSLIHDDLP+MD+ +RRGK T H+ Y E AI+A
Sbjct: 57 DSICAQERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILA 116
Query: 120 GNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQ 176
G+GLL++AF++I+ R + + G GM+GGQ + +++ ID
Sbjct: 117 GDGLLSWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDT 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I + KTGAL+ + SGAI A A+ + L +G N+G+ FQ+ DDLLD +
Sbjct: 177 LATIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEE 236
Query: 234 LPK 236
L K
Sbjct: 237 LGK 239
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E +H YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4]
gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
Length = 286
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
L E ++ I+ LD L + + ++RY++LGG K++R L+ A
Sbjct: 2 DFNRILAEKARLIEEALDRYLPPEFAP-----PHPIHQSMRYSVLGGGKRLRPALLLGAA 56
Query: 63 SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L IE IHCYSL+HDDLP+MDN RRG+PT H + E AI+ G+
Sbjct: 57 EAVGADVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGD 116
Query: 122 GLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
LLT FE+++ + + ++++ + G +GM+GGQ+LD+ + +
Sbjct: 117 ALLTLGFELLARAALVARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
I + KTGAL A +GA++ A + ++L + E LG+ FQ+ DD+LD D K
Sbjct: 177 EEIHRKKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDL--DEEAK 234
>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 117/239 (48%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN ++L+E + ++ I+ D + + ++ A+ Y+L GGK++R LV
Sbjct: 1 MN-NFDTELKERTAYVEKIVYDYCPKEEGLQKI-----IIEAMNYSLKAGGKRLRPMLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E LF + A AA+E IH YSL+HDDLP+MDN RRGK T H Y E I+A
Sbjct: 55 ETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDNDMYRRGKKTTHAVYGEDIGILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+GLL A+E +S + K R+ L +++ + G E +
Sbjct: 115 GDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGIYGMIGGQTVDVINENKEKDIDT 174
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K+KT AL+ A GAI+A + E + N+GI FQ+ DD+LD L
Sbjct: 175 INFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIATNVGIAFQIQDDILDVTGTLE 233
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 131/240 (54%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L S L + K I+ L + D L ++ Y+L GGK++R +V
Sbjct: 1 MTNKLTSFLADRKKTIENQLSVYTEKLD------MPDSLKKSMLYSLQAGGKRLRPLIVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A
Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I S ++ R +L+ L G +GM+GGQ ++ ++ + +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSY------ANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + E + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ +++ L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b]
gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b]
Length = 292
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L + + ++ + +L+ ++ RL A+ Y+L GGK+IR LV
Sbjct: 1 MNRT--DDLNKWKRAVELAMQELIDS------SEMPKRLRDAMAYSLEAGGKRIRPALVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ ++ V A++E +H YSLIHDDLP+MD+ +RRG+PT H Q+DE TAI+A
Sbjct: 53 AVLETYGMSLERGREVAASLEMVHTYSLIHDDLPAMDDDDLRRGRPTNHRQFDEATAILA 112
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT AF I++ + L ++ + G+ G ML + + ++
Sbjct: 113 GDALLTDAFRILTQMPLSALDIVEIIRIFGLAAGSSGMVGGQLDDMLAEKRNDVTLEELQ 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ +A E+GAI+A AS ++ L+ FG +LGI FQ+ DD+LD D
Sbjct: 173 SIHERKTGALLVYALEAGAILAGASVEDRMHLKQFGRHLGIAFQIQDDILDVVGDEETIG 232
Query: 236 KK 237
K+
Sbjct: 233 KR 234
>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
Length = 272
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L S L + K I+ L + D L ++ Y+L GGK++R +V
Sbjct: 1 MTNKLTSFLADRKKTIENQLSVYTEKLD------MPDSLKKSMLYSLQAGGKRLRPLIVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A
Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I S ++ R +L+ L G +GM+GGQ ++ + + +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAGNRQVTLEE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHERKTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234
>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
Length = 295
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + +Q RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
Length = 296
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSY------ANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
Length = 308
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 147/243 (60%), Gaps = 8/243 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ +L + +T+L LL + RL+ A+RY+ L GGK++R FLV E
Sbjct: 7 SADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLRPFLVVE 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+++F V +AL GAA+ECIHCYSLIHDDLP+MDN +RRG+PT+H D+ TAI+AG
Sbjct: 67 SSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDATAILAG 126
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQ 176
+GLLT AF+II+ + +R L +L G+ GM+GGQM + + +
Sbjct: 127 DGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAGIGGMVGGQMLDLAGEGRFGDREPVD 186
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V +Q+MKTGAL+ F C SGA++ ASQ + + L +G LG FQ+ADDLLD E D
Sbjct: 187 VARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDVEGDAAA 246
Query: 234 LPK 236
L K
Sbjct: 247 LGK 249
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ ++ ++ LD+ + ++ A+RYA L GK++R L
Sbjct: 78 TFEFDPYMISKAESVNKALDE-------AIPVGEPLKIHEAMRYAILAAGKRVRPILCLA 130
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G
Sbjct: 131 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 190
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL+ AFE ++ ++ + L +IG +G++ GQ +DI E +D +V
Sbjct: 191 GALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 248
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E
Sbjct: 249 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 308
Query: 233 DLPK 236
+L K
Sbjct: 309 ELGK 312
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
Length = 296
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 132/237 (55%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + R++T L +++ + + L ++ Y+L GGK++R L+
Sbjct: 6 NLKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLFATL 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + L A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+AG+
Sbjct: 60 HAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDA 119
Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLT +F++IS ++ +++ QL+ L G +GM+ GQ ++ + + + ++
Sbjct: 120 LLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEY 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTG L+ F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E K
Sbjct: 180 IHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + SK ++ +LD+ + + ++ A+RY LL GGK++R L
Sbjct: 58 SEFMSYMIRKSKSVNEVLDEAVPLCEPVL------KIREAMRYTLLSGGKRVRPMLCLAA 111
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E AI+A +
Sbjct: 112 CELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVD 171
Query: 122 GLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQ------MLDIQDEFIDE 174
L+ A + + + +L + +G +G++ GQ D
Sbjct: 172 ALIALAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGL 231
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--- 231
+ I KT AL+ A GAIM S E ER+R + +G++FQ+ DD+LD
Sbjct: 232 KHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSS 291
Query: 232 EDLPK 236
E+L K
Sbjct: 292 EELGK 296
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 296
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSY------ANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ +D + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ L N K I++ +D L + + + + ++YA+L GGK++R L+
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELN------YPEVIAEGMKYAVLNGGKRLRPILLFMILD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + AAIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L
Sbjct: 57 ILGCEKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LT+AF I++ L +++ + G+ GM+GGQM+D + + ID + I
Sbjct: 117 LTHAFYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG LM E I+ A + EKE L F + +G+ FQ+ DD+LD E D L K
Sbjct: 177 SNKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGK 234
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 297
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L S L ++++L + S RL A+RY+LL GGK++R L
Sbjct: 3 TFHLESFLATRQAHVESLLKSRADRLESL---GTPPRLAEAMRYSLLAGGKRLRPVLCLT 59
Query: 61 CASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A + A V A+E IH YSL+HDDLPSMDN +RRG+PT H Y E A+
Sbjct: 60 FADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMAL 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ LLT AF ++ + + + G + +D +
Sbjct: 120 LAGDALLTEAFALV---GSGPEPVRGLLCGELARAAGAAGMVGGQVLDVAEDRPAHLDYL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
+ +MKTGAL+ AC G + A R +G+ +G+ FQ+ADD+LD DL
Sbjct: 177 VRLHRMKTGALLRAACRMGVLGAGGDAETLARATTYGDAIGLAFQIADDILDVTATAEDL 236
Query: 235 PK 236
K
Sbjct: 237 GK 238
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 299
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ + R++ LD + +H RL A+RY+ L GGK++R LV
Sbjct: 5 NMEQHISALRARLEQALDRWIPAETTH-----PARLHEAMRYSALGGGKRVRPVLVYGAG 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V A+E IH YSLIHDDLP+MDN +RRGKPT H +DE AI+AG+
Sbjct: 60 QALGVAPERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDA 119
Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
+ AF+I+S R ++M +L G +GM GGQ +D + +D Q+
Sbjct: 120 MQALAFQILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLED 179
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ A + E L F + +G+ FQ+ DD+LD E D
Sbjct: 180 MHVHKTGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTA 236
>gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 304
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 116/238 (48%), Positives = 157/238 (65%), Gaps = 3/238 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ + L + ++ L LL Q + +RLL+A+R+ +L GGK++R FLV
Sbjct: 4 LSTDFTAILNHRAMEVEMALTGLLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A+LF LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+A
Sbjct: 64 ESAALFGKGSDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 123
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GLLTYAF+IISS +T L IR QL+ +L GL GM+GGQ LD+ E + +
Sbjct: 124 GDGLLTYAFDIISSDETDLDAAIRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGI 183
Query: 180 I--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I Q MKTGAL+ FACE+GAI+A+AS ++ER+ FG +G+ FQLADDLLD D
Sbjct: 184 ITLQAMKTGALIRFACEAGAIIANASSEDRERMAEFGSAIGLAFQLADDLLDVTADAE 241
>gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 305
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 112/242 (46%), Positives = 155/242 (64%), Gaps = 7/242 (2%)
Query: 1 MNGG----LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L + ++ +L LL A + DRL++A+R+ +L GGK++R
Sbjct: 1 MTNDDQMAFEMALIRRAAAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRP 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
FLV E A+LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE T
Sbjct: 61 FLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEAT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ LLT AF+II+ T L R+ L+L+L G GM+GGQ LD++ E
Sbjct: 121 AILAGDALLTLAFDIIAGESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPD 180
Query: 176 QVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +I Q MKTGAL+ FACE+GA++A A +++ERL FG +G+ FQLADDLLD D
Sbjct: 181 EAGIIRLQAMKTGALIRFACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGD 240
Query: 234 LP 235
Sbjct: 241 AS 242
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD + L A+RYALL GGK++R L
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEP------PAALHEAMRYALLAGGKRVRPALCLAA 117
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++ G+
Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL+ +F ++ + D + + IG G + E
Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++ I KT AL+ + GAI+ S + E LR + ++G++FQ+ DD+LD
Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297
Query: 231 E---EDLPK 236
E+L K
Sbjct: 298 TKSSEELGK 306
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 233
>gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L+ L A+ L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLERVETALEYYLPTEATE-----PATLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + TQ+ + +
Sbjct: 117 LQSQAFVSLTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSY------ANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K K G L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKAGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEE 233
>gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 301
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 93/243 (38%), Positives = 135/243 (55%), Gaps = 11/243 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L L S+ +++ LD LL + S + R+ A+RY L GGK++R FLV
Sbjct: 6 MSPRLTEALTVVSQAVNSELDRLLPVSESP-----DSRVHEAMRYVTLDGGKRLRPFLVM 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ ASLFNV A+RV AIE IHCYSL+HDDLP MD+ +RRG+PT H +DE TA++A
Sbjct: 61 QSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLA 120
Query: 120 GNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLT AFE++ +P L+ L +D +
Sbjct: 121 GDALLTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGI 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+Q++KTG L F+CE+GA++ A + LR + +LG+ FQ+ADD+LD E D +
Sbjct: 181 TRLQQLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDVAEV 240
Query: 235 PKK 237
K+
Sbjct: 241 GKR 243
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 122/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + +K ++ LD + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKSYMINKAKSVNAALD-------ISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIAS 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L N TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 117 CELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + + L IG G++ GQM+D+ E ++
Sbjct: 177 ALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 8/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M + RI++ LD L + RL A+RY++LGG K++R LV
Sbjct: 1 MTA--EALFARWRDRIESQLDAALPS-----PAEAPQRLHQAMRYSVLGGGKRMRPLLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 54 ASGQLFGAQPESLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF +++ + L+ +D + +
Sbjct: 114 GDALQTRAFGLLADAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E
Sbjct: 174 MHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSE 229
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T LD L A+ L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLERVETALDHYLPGEATE-----PATLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + TQ+ + +
Sbjct: 117 LQSQAFVALTSDVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
Length = 295
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+L + S+ + ++ L +T LL A+ Y+ GGK++R L+ E
Sbjct: 2 TFKEELAKRSEEVQAVVYAYLPAEEGFQKT-----LLEAMNYSMTAGGKRLRPLLMQETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF N AAIE IH +SL+HDDLP+MDN RRGK T H+ Y E AI+AG+G
Sbjct: 57 RLFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
LL YA+E N + M LT G+ GMLGGQ +D+Q ++
Sbjct: 117 LLNYAYETACRAFALEPGNPHIGEAMTVLTTKTGVYGMLGGQAVDVQSVGGTLSREKLDF 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I ++KT AL+ + +GAI+A AS+ E + ++G+ FQ+ DD+LD +L K
Sbjct: 177 IYRLKTSALIECSMMTGAILAGASEEEIRTIGQVASDVGLAFQIQDDILDVTSTSQELGK 236
>gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2);
farnesyltranstransferase [Arabidopsis thaliana]
gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP
synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 2; AltName:
Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ ++ ++ L++ + ++ A+RYA L GK++R L
Sbjct: 82 TFEFDPYMMSKAESVNKALEE-------AIPVGEPLKIHEAMRYAILAAGKRVRPILCLA 134
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G
Sbjct: 135 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 194
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL+ AFE ++ ++ + L +IG +G++ GQ +DI E +D +V
Sbjct: 195 GALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 252
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E
Sbjct: 253 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 312
Query: 233 DLPK 236
+L K
Sbjct: 313 ELGK 316
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ ++ ++ L++ + ++ A+RYA L GK++R L
Sbjct: 79 TFEFDPYMMSKAESVNKALEE-------AIPVGEPLKIHEAMRYAILAAGKRVRPILCLA 131
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ A+E IH SLI DDLP MDN +RRGKPT H Y E AI++G
Sbjct: 132 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 191
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL+ AFE ++ ++ + L +IG +G++ GQ +DI E +D +V
Sbjct: 192 GALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 249
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E
Sbjct: 250 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 309
Query: 233 DLPK 236
+L K
Sbjct: 310 ELGK 313
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L +L++ + + ++D + R+ A+ Y+L +GGK++R L A
Sbjct: 7 LKRELKDKKEIFERYMEDWVGSR----PEGVPPRMWDAMVYSLKVGGKRLRPVLCMAAAE 62
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L L + A+E +H SLIHDDLP+MD+ +RRG+PT H+ Y E AI+AG+ L
Sbjct: 63 LLGGRSDLVLPMALALEMVHTASLIHDDLPAMDDDVLRRGQPTNHVVYGEALAILAGDAL 122
Query: 124 LTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
L AFE+ ++ +++ + + +IG G+ GGQ ++ + + + I
Sbjct: 123 LCQAFELPLTELPSEIPRGNVVKAVAHFARSIGPGGICGGQVLDMESEGSEEECSSPTEI 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KT AL+ + +GAI++ S + E L +G LG+ FQ+ADD+LD + D
Sbjct: 183 STLKTAALIRTSLITGAILSGGSAEDLEALESYGLELGVAFQIADDILDVKGDQE 237
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
Length = 296
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GL I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 233
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M + + RI+ L LL +RL A+RY +LGG K++R L
Sbjct: 1 MTADFQDWARSHQVRIENSLQTLLPAAD-----VAPERLHEAMRYTVLGGGKRVRPLLAF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N A+E IH YSL+HDDLP MD+ +RRGKPT HI+Y E A++
Sbjct: 56 AAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLT 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L + AF++++ ++ +++ L G +GM GGQ +D + ++
Sbjct: 116 GDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTGAL+ A GA + + L F + +G+ FQ+ DD+LD E
Sbjct: 176 EFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEA 231
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1]
Length = 296
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 133/240 (55%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN +++ ++ ++ L L + + + +L A+ Y+ L GGK++R +V
Sbjct: 1 MNK-FEGEMKYMAQVVEQELSRYLPR-----KDEFPSKLHEAMHYSTLSGGKRLRPIIVM 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A LF +++ + IE IH YSLIHDDLP MDN RRGKPT H Y + A++A
Sbjct: 55 KAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLA 114
Query: 120 GNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLT+AF I+ + + + ++ ++ G GM+GGQ +DI D ++
Sbjct: 115 GDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRD 174
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
F I KTG LM + SGA +A AS+ + E ++CFGE LG+IFQ+ DD+LD +
Sbjct: 175 TLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEA 234
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD + L A+RYALL GGK++R L
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEP------PAALHEAMRYALLAGGKRVRPALCLAA 117
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++ G+
Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL+ +F ++ + D + + IG G + E
Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++ I KT AL+ + GAI+ S + E LR + ++G++FQ+ DD+LD
Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297
Query: 231 E---EDLPK 236
E+L K
Sbjct: 298 TKSSEELGK 306
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + + + L + L ++ Y+L GGK++R LV
Sbjct: 11 PSFKEYLTGTTDVVSSALIEQFPA-----DWNIPAVLRESMNYSLTAGGKRLRPLLVIAA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A F + AL V A+E +H YSLIHDDLP+MD+ RRGK T H Y E A++AG+
Sbjct: 66 AEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGD 125
Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
LLT+AF I + + + + ++ L+ G +GM+GGQ + + ++
Sbjct: 126 ALLTHAFYSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEEL 185
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ F+ +G + A +++ E LR FG +LG+ FQ+ DD+LD D K
Sbjct: 186 EFIHLHKTADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESK 244
>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
Length = 313
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L +R+D L + + SH + +L+ AIRY +L GGK+IR +LV
Sbjct: 9 DFHQQLTLYQRRVDEKLKNFIQPLPSH-----SRQLIEAIRYTVLCGGKRIRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AA+ECIH YSL+HDDLP+MD+ +RRG+P+ HI++ E AI+AG+
Sbjct: 64 KMFGLSPGSLDVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDA 123
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF +++ P + R +++ L IG GM GQ L + I +
Sbjct: 124 LQTLAFSLLADQPMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEK 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
I + KTGAL+ A GA+ A S+ L + + +G+ FQ+ DD+LD +
Sbjct: 184 IHRHKTGALIRAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGET 239
>gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
Length = 299
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +RI+ L D + N L+ A+RY A+LGGK++R +LV
Sbjct: 2 DFNQQLAAHQQRINQALLDYIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AAIEC+H YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 57 QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P ++ D R ++ L + G+ GM GGQ L+ + I ++
Sbjct: 117 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 176
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRAAVRLGALAAGTPGREVLPLLDRYANAIGLAFQVQDDILDVIGDTATIG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
LQ ID L D + Q ++ + RL A+RY LLGG K+IR L A
Sbjct: 10 SDFLQHCRAEIDQQLADYMDQASA------SQRLQDAMRYGLLGGGKRIRPALCLAAAEA 63
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
AL A+E IH YSL+HDDLP+MDN +RRG+ T HI +DE +AI+AG+ L
Sbjct: 64 VGGQRQIALAPACALEMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQ 123
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182
AF +++ +L ++ ++ +L + G GM+GGQ +D + Q+ + +
Sbjct: 124 AEAFRVLA-TAPRLSAEVKLAMVKALANACGANGMVGGQAIDLESVARTLTLDQLENMHR 182
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + GA+ + L + LG+ FQ+ DDLLD E D
Sbjct: 183 HKTGALIEASVHLGALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTE 236
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/241 (34%), Positives = 129/241 (53%), Gaps = 12/241 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
++L + +I+ L D D ++SA++Y+L GGK++R L+ E
Sbjct: 11 TAKFANRLTKKGHQIEAYLTDCF-----VGPFDAPDIIVSAMKYSLFAGGKRVRPILLME 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++F + A+ AIE IH YSLIHDDLP+MDN +RRG+PT H Y E AI+AG
Sbjct: 66 TCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHKVYGENIAILAG 125
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM------LSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+ LL A E ++ R++ + + G+ G G +L D+ I+E
Sbjct: 126 DALLNAAVETAVEGIETMEPAERARGIAALSLLMRAAGVNGMIGGQTGDLLAEDDDAINE 185
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ I KTGAL+ A GA++A AS++E++ LR +G +G+ FQ+ DD+LD E +
Sbjct: 186 DKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQVVDDILDVESET 245
Query: 235 P 235
Sbjct: 246 A 246
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 134/240 (55%), Gaps = 12/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L + R++T L +++ + + L ++ Y+L GGK++R L+
Sbjct: 5 MN--LKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLF 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + L A+E IH YSLIHDDLPSMD+ +RRGKPT H Y E TAI+A
Sbjct: 57 ATLHAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILA 116
Query: 120 GNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ LLT +F++IS ++ +++ QL+ L G +GM+ GQ ++ + + + +
Sbjct: 117 GDALLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDE 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTG L+ F ++GAI+A A+ ++E L F +++G+ FQ+ DD+LD E K
Sbjct: 177 LEYIHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236
>gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
Length = 305
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L S L ++ ID + D LL + L+ A+RY+ + GGK++R LV
Sbjct: 12 AKLSSALNRIARDIDAVFDVLLP-----VPDDTRAPLVEAMRYSAMDGGKRVRPLLVVAT 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + V+ ALRVG A+E IH YSLIHDDLP MD+ +RRGK T+H YDE TA++AG+
Sbjct: 67 AEMLGVSRDPALRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
L AFEI++ +T +++L+ +L G+ GM GGQM+D+ + D +
Sbjct: 127 SLHALAFEILTDDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITR 186
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q++KTGAL+ + E GAI+A + + LR + ++G+ FQ+ADDLLD E D K
Sbjct: 187 LQQLKTGALLAASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEK 243
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
LQ + ++ +LDDL+ RL A+RYA+LGG K++R+ +V
Sbjct: 8 FAEWLQGRVRHVEDVLDDLMPPAE-----VLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQ 62
Query: 64 LFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V+ R AA+E IH YSL+HDDLP MDN +RRG+PT H+Q+DE TA+
Sbjct: 63 ACPVSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAM 122
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L AF++++S +++ L+ L + ++
Sbjct: 123 LAGDALQPLAFDLLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDEL 182
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGA++ + G I+A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 183 QTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTA 240
>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
Length = 295
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + +Q RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESDTA 232
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 8/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + R + + LL QT RL +A+RY++L GGK++R L
Sbjct: 2 SDFLSWVSIHQSRFEDAVGRLLPQTD-----VLPQRLHAAMRYSVLEGGKRVRPLLAYAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AA+E IH YSL+HDD+P MD+ +RRGKPT HI+YDE TA++ G+
Sbjct: 57 GELAGAPIERVEIAAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
L + AF+++S + + + Q++ L G +GM GGQ +D+ ++
Sbjct: 117 ALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA Q + ++L +G+ +G+ FQ+ DD+LD E D
Sbjct: 177 MHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTA 232
>gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 287
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 134/236 (56%), Gaps = 14/236 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E + I+ LD + + + L +A+RY+L GGK+IR LV ECA
Sbjct: 2 EFKNILKEKASFINKQLDRFVPRCI-------PEELSNAMRYSLEAGGKRIRPILVIECA 54
Query: 63 SL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+VN + + + E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG
Sbjct: 55 KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLLT+AFE+IS +L +++ L+HN+G+ GM+GGQ D + V I
Sbjct: 115 DGLLTFAFELIS-NNKKLSAEKIVKVINILSHNVGIYGMVGGQ---AADILPNFKDVEFI 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT + C+ G ++A A++ E +L+ +G N+G+ FQ+ DD+LD D K
Sbjct: 171 HLNKTAKFLSACCQIGCVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 127/246 (51%), Gaps = 17/246 (6%)
Query: 1 MNGGLPSKLQENSK----RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M P++L S+ R++ L + + L A+RYA+L GGK++R
Sbjct: 6 MTDWTPARLAGWSEPHLMRVEAALSR-------WVGVEAPVLLGDAMRYAVLDGGKRLRP 58
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV + N ALR A E IH YSL+HDDLP MDN +RRGKPTVH+++ E
Sbjct: 59 LLVLAASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEAD 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+ L AFE+++ ++ ++ L L G QGM GGQ +D+ I
Sbjct: 119 ALLAGDALQALAFELLAPEGDEIPAATQATLCRLLARAAGSQGMAGGQAIDLASVGIALN 178
Query: 176 QVF--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + ++KTGAL+ + E GA + S LR +G +G+ FQ+ DD+LD D
Sbjct: 179 ETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIGLAFQVVDDILDVTAD 238
Query: 234 ---LPK 236
L K
Sbjct: 239 SQTLGK 244
>gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
sp. H13-3]
gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
sp. H13-3]
Length = 324
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 112/241 (46%), Positives = 160/241 (66%), Gaps = 6/241 (2%)
Query: 1 MNG---GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ +KL++N+ + +++L LL A + LL A+R+ +L GGK++R F
Sbjct: 21 MDAQMTNFETKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPF 80
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E +L N A VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TA
Sbjct: 81 LVIESTALLGGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATA 140
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLT AF+II+S + L+ + ++ L+LSL G+ GM GGQ LD+ E +
Sbjct: 141 ILAGDSLLTLAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDE 200
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A + +E++RLR FGE +G+ FQLADDLLD D
Sbjct: 201 AGIITLQAMKTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTADA 260
Query: 235 P 235
Sbjct: 261 A 261
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ +R++ L+ L ++ +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWTRGVLERVEAALEHYLPAESTE-----PAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + Q+ + +
Sbjct: 117 LQSQAFVSLTSDVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ A N L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD + + L A+RYALL GGK++R L
Sbjct: 56 FDFKAYMGERAVAVNGALDAAVPA------GEPPATLHEAMRYALLAGGKRVRPALCLAA 109
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ + E A++AG+
Sbjct: 110 CVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGD 169
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL AF+ ++S + D ++ + IG G + E
Sbjct: 170 ALLALAFQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 229
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++ I KT AL+ + GAI+ S+ + ERLR + ++G++FQ+ DD+LD
Sbjct: 230 PVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDV 289
Query: 231 E---EDLPK 236
E+L K
Sbjct: 290 TKSSEELGK 298
>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
Length = 306
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + + L+ A+RY A+LGGK++R +LV
Sbjct: 9 DFSQQLTAHQQRVNQALLDFIAPL-----PFGDSDLVEAMRYGAVLGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AAIECIH YSLIHDDLP+MDN +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLVNLDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ + + D R ++ L G+ GM GGQ L+ + I +
Sbjct: 124 LQTLAFSILAEADMSDVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQ 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
Length = 296
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 8/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + + +D D L + RL+ A+RYA + GGK++R LV
Sbjct: 1 MPDLLSDAFDQVQQDVDAAFDAYLP-----VPQDTRGRLVEAMRYAAIGGGKRVRPLLVC 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LF V+ A+ G A+E IH YSLIHDDLP MD+ +R GKPT+H YDE TA++A
Sbjct: 56 ATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMDDDDLRHGKPTLHKVYDEATAVLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L AF+I++ P +R++L+ +L G +GM GGQM+D +E D QV
Sbjct: 116 GDCLHALAFDILTMPGISNDPFVRAELVATLAKASGHEGMAGGQMMDIVSDEEEYDIRQV 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q++KTGAL+ + E GA++ + LR + ++G+ FQ+ADDLLD E D K
Sbjct: 176 TRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYARDIGLAFQIADDLLDVEGDETK 234
>gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10]
gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua]
gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F]
gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125]
gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola]
gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1]
gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92]
gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A]
gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003]
gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10]
gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516]
gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua]
gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92]
gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F]
gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125]
gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola]
gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516]
gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A]
gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004]
gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038]
gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003]
gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 306
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A++GGK++R +LV
Sbjct: 9 DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L T AF I++ P + D R +++ L G GM GQ LD++ E +
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA A A + L + E +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGAQAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1]
gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1]
Length = 303
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 3/235 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
+ L + L E + R++ +L D L +T+ RL+ A+R+A L GGK++R L+
Sbjct: 3 VTERLEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMV 62
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A LF R AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE TAI+A
Sbjct: 63 ETARLFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILA 122
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT AF++I+ +R +L L G+ GM GGQMLD++ E ++ +
Sbjct: 123 GDALLTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEI 182
Query: 180 --IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGAL+ +AC +GAI+A A + R+ FGE +G+ FQLADDLLD E
Sbjct: 183 RTLQAMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLEA 237
>gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
Length = 303
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 135/241 (56%), Gaps = 12/241 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + L ++ LD L ++ Q L ++RY+LL GGK+IR L
Sbjct: 8 AIEAYLNRCKNAVEQFLDSLFVKE----QRTDYGTLAESMRYSLLAGGKRIRPVLAMAAI 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + A +E IH YSLIHDDLPSMDN +RRGKPT H+ Y + TAI+AG+
Sbjct: 64 EALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDA 123
Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
LLT+AF ++S P IR +++ L+ G+ GM+GGQ +DI E + + +
Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLE 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ + KTGAL+ + GA++ AS + E L +G+ +GI FQ+ADDLLD E D L
Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAALLG 243
Query: 236 K 236
K
Sbjct: 244 K 244
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
Length = 290
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L+ +L+
Sbjct: 3 KIKKIGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGENALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+ I++ + ++ + +L+L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 361
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 16/244 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + E +K ++ LD + + + + A+RY+LL GGK+I +
Sbjct: 65 DFNFKAYMLEKAKSVNQALD-------TAIPLREPLEIHKAMRYSLLDGGKRIHPIVCIS 117
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ V A+E +H SL+ DDLP MDN IRRGKP+ H + E I+A
Sbjct: 118 ACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAV 177
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQM---LDIQDEFIDET 175
+ LL AFE +++ T + +IG QG++ GQ I
Sbjct: 178 DALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLE 237
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
+ I K G L+ + GA++ S + E LR FG +G+++Q+ DD+LD +
Sbjct: 238 GLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQ 297
Query: 233 DLPK 236
+L K
Sbjct: 298 ELGK 301
>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
Length = 294
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L L+ ++++ + + L ++ Y+L GGK++R L+
Sbjct: 1 MNENLQRYLEIYREKLEATYNTYFSHLD------IPNNLKESMLYSLNAGGKRLRPILIL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + AIE IH YSLIHDDLP+MD+ RRGK T H Q++E TAI+A
Sbjct: 55 ASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKQFNEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ LLTY+F++ISS D +L+ L+ G GM+ GQ ++ + + + ++
Sbjct: 115 GDALLTYSFQLISSDDLLTSDEK-VELIRILSEASGPAGMVAGQILDMEAEKQAVTLEEM 173
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I +KTG L+ FA +GA + A+ N+ + L + LG+IFQ+ DD+LD D K
Sbjct: 174 EEIHALKTGELIRFAIIAGAYLGGATDNQLKHLTDYAYYLGLIFQVQDDILDITGDASK 232
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis
ATCC 14580]
gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
ATCC 14580]
gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
Length = 296
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M G L L+ I+ L + Q L ++ Y+L GGK++R LV
Sbjct: 1 MTGKLEGFLKSRKTVIEERLPMYIKDL------QAPSILKESMLYSLEAGGKRLRPILVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H Y E TAI+A
Sbjct: 55 ALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAILA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ LLT +F++I S+ + + R +L+ L G +GM+GGQ ++ + + + +
Sbjct: 115 GDALLTESFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDMEAESKSVSLDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F+ +GAI+A AS+ E E+LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LQRIHEGKTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQIRDDILDLEGSEDK 234
>gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15]
Length = 298
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
L+ R+D LD + + ++ + RL A+RY++LGG K+IR L A
Sbjct: 11 FLETCRARVDAELDRCITRDSA------SGRLQEAMRYSVLGGGKRIRPALCLAAAKAMG 64
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
AL ++E IH YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L
Sbjct: 65 QTGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQAL 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMK 184
AF ++ L +++R ++ L G GM+GGQ +D++ Q+ + + K
Sbjct: 125 AFGWLA-EAPGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHK 183
Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
TGAL+ + GA+ A + L + + LG+ FQ+ DDLLD E D
Sbjct: 184 TGALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDT 234
>gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 287
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 14/236 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L+E + I+ LD + + L +A+RY+L GGK+IR LV E A
Sbjct: 2 EFKDILKEKASFINKQLDRF-------VPNCIPEELSNAMRYSLEAGGKRIRPILVIESA 54
Query: 63 SL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+VN + + + E IH YSLIHDDLP+MD+ +RRGKPT H + E AI+AG
Sbjct: 55 KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLLTYAFE+IS +L +++ L+HN+G+ GM+GGQ D + V I
Sbjct: 115 DGLLTYAFEVIS-NNKKLSAEKIVKVINILSHNVGIYGMVGGQ---AADILPNFKDVEFI 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT + C+ G ++A A++ E +L+ +G N+G+ FQ+ DD+LD D K
Sbjct: 171 HLNKTAKFLSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226
>gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 297
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 84/235 (35%), Positives = 125/235 (53%), Gaps = 12/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + L+ + ++T L L RL ++ Y+L GGK++R L CA+
Sbjct: 7 MKALLKSRGREVETYLSACLD------GRPMPPRLKESMLYSLQAGGKRLRPVLCLSCAA 60
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL AAIE IH YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG+GL
Sbjct: 61 LCGLEPQKALPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGL 120
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMI 180
LT AF I+ + + + + + L G GM+GGQ D+ + ++ +
Sbjct: 121 LTDAFVIM--CRAPVPPDRLLRAVAELALAAGASGMVGGQEWDMIYTGRSQVSLEELRGM 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ +C G ++A + FG +LG+ FQ+ADD+LD D
Sbjct: 179 HAMKTGALLRASCVCGGLLAGVDDKALRAISNFGSSLGVAFQIADDILDVVADTA 233
>gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
Length = 295
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M +++DT LD +L +A+RY+L GGK++R L
Sbjct: 1 MTWTFRDFASHCRQQVDTALDQRFP------LGDDPTQLRAAMRYSLFNGGKRVRPILAY 54
Query: 60 ECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A N ++ + AA+EC+H YSL+HDDLP+MD+ +RRGKPT HI ++E TAI
Sbjct: 55 ASALAINPHISLKQVDPIAAAVECLHAYSLVHDDLPAMDDDDLRRGKPTCHIAFNEATAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+GL T AFE++ S + I+ +L+ + + L ++ + Q+
Sbjct: 115 LAGDGLQTLAFELLGSIEAPADIRIQLIQVLAKGSGVEGMVLGQAIDLAAVEQQLTLEQL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+ + KTGAL+ + GA+ A A+ + L + +G+ FQ+ DD+LD D L
Sbjct: 175 ETMHRYKTGALIRASVTMGALFAGANNTQLAALDQYASAIGLAFQVQDDILDVISDTQTL 234
Query: 235 PKK 237
K+
Sbjct: 235 GKQ 237
>gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
Length = 306
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A+LGGK++R +LV
Sbjct: 9 DFSQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSPTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + D R ++ L H G+ GM GGQ L+ + I +
Sbjct: 124 LQTLAFSILAQAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLEDLER 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA A + L + E +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGAFAAGEQGRKALTLLDRYSEAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
Length = 293
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 121/235 (51%), Gaps = 9/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +L+ R+D L++ L + + L ++RY+L GGK++R LV
Sbjct: 2 EIRQQLKHYQSRVDNHLENCLPSES------IDPLLQESMRYSLFNGGKRVRPALVYLVN 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A AAIECIH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+AG+
Sbjct: 56 QILGGTDEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDA 115
Query: 123 LLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AFE++++ + Q I+ +LS G + L + + Q+ +
Sbjct: 116 LQCLAFELLANDQQQSADSKIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAMH 175
Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA S+ + + L + +G+ FQ+ DD+LD E D
Sbjct: 176 QHKTGALLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGDSE 230
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ ++ ++ + ++ L L + +++ L A+ Y+L GGK++R L+
Sbjct: 1 MHVNFKAEWKKRADLVEEGLLRELKKV-----PAYDETLEKAMEYSLMAGGKRLRPVLLM 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L G AIE IH YSLIHDDLP+MDN RRGKPT H + + A++A
Sbjct: 56 AAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
G+ LLT AFE++ + ++ ++ G GM+GGQ+LD++ E +
Sbjct: 116 GDALLTLAFEVML-RQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAAL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL C A SGAI+A A + E L + E G+ FQ+ DD+LD D
Sbjct: 175 RKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEA 232
>gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
Length = 306
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+L + +R++ + D + N L+ A+RY A+LGGK++R +LV
Sbjct: 7 TVDFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVYA 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F ++ AAIECIH YSL+HDDLP+MD+ +RRG+PT H+++ E AI+AG
Sbjct: 62 TGQMFGLSLANLDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAG 121
Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L T AF I++ P + D R ++ L + G+ GM GGQ L+ + I +
Sbjct: 122 DALQTLAFSILAESPMPDVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQISLDDL 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL-- 234
I + KTGAL+ A GA+ A A + L + +G+ FQ+ DD+LD D
Sbjct: 182 EQIHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTAT 241
Query: 235 -PKK 237
K+
Sbjct: 242 IGKR 245
>gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
K279a]
gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
K279a]
Length = 292
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 8/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M + RI++ LD L + RL A+RY++LGG K++R LV
Sbjct: 1 MTAEV--LFARWRDRIESQLDAALPS-----PAEAPQRLHQAMRYSVLGGGKRMRPLLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + ++E IH YSL+HDDLP+MD+ +RRGKPT H+ +DE TAI+A
Sbjct: 54 ASGHLFGTQPESLDAAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF +++ + L+ +D + +
Sbjct: 114 GDALQTRAFGLLADAPLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E
Sbjct: 174 MHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSE 229
>gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDALFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
Length = 294
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +L++ ++ +L ++ + + Y+L GGK+IR L+ E
Sbjct: 2 DIKKELKDKQSFVEDVLKKY------TIKEGKPKSIFESFNYSLFVGGKRIRPILLMESC 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL + AA+E IH YSLIHDDLP MD+ +RRGKPT H Y E TA++AG+
Sbjct: 56 KCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDS 115
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
L ++ K+ N + M + + G++GM+ GQ++D++ + D +
Sbjct: 116 LLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDF 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I KTGA++ + SGA++ A+ +E + L + +G++FQ+ DD+LD D L K
Sbjct: 176 IHDNKTGAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGK 235
Query: 237 K 237
K
Sbjct: 236 K 236
>gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 323
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 137/237 (57%), Gaps = 7/237 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+L E + ++T L + L + RL+ A+R+A+LGG K++R FL E
Sbjct: 21 ADFTHRLTEVAGTVETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIET 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G+
Sbjct: 81 ARMLGGSEAAALAAGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGD 140
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ------MLDIQDEFIDET 175
L T AFEI++ P Q +R+ L+L L GL GM+GGQ +D
Sbjct: 141 ALQTLAFEIVADPAWQPDARVRADLVLGLARASGLGGMVGGQLLDLTAEGRFGAANMDVD 200
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGA++ F+ E+GAI+ A ++++ L +G LG FQ+ADD+LD E
Sbjct: 201 DTLRMQAMKTGAILAFSVEAGAIVGGADKDQRAALLRYGLALGQAFQIADDILDREA 257
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ ++ ++ L++ + ++ A+RYA L GK++R L
Sbjct: 84 TFEFDPYMMSKAESVNKALEE-------AIPVGEPLKIHEAMRYAILAAGKRVRPILCLA 136
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A+E IH SLI DDLP MDN +RRGKPT Y E AI++G
Sbjct: 137 SCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSG 196
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL+ AFE ++ ++ + L +IG +G++ GQ +DI E +D +V
Sbjct: 197 GALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 254
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
I KT L+ A GAI+ S E E +R F +G++FQ+ DD+LD E
Sbjct: 255 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 314
Query: 233 DLPK 236
+L K
Sbjct: 315 ELGK 318
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 9/233 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ S E ++T L+ L +T RL A+RY++LGG K++R L
Sbjct: 1 MHPDFQSWASEQLALVETCLEKHLPET-----NCAPARLHDAMRYSVLGGGKRVRPLLSF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + A GAA+E IH YSL+HDDLP MDN +RRGKPT H++YDE TA++
Sbjct: 56 AAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLV 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L + AF++++ +++ +++ L G +GM GGQ +D+ ++
Sbjct: 116 GDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
+ KTGAL+ A GA + + + + L F + +G+ FQ+ DD+LD
Sbjct: 176 EFMHIHKTGALIRAAVILGARCGNRLDETQFKLLDHFAKCMGLAFQVIDDILD 228
>gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
TrichSKD4]
gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
TrichSKD4]
Length = 310
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 107/240 (44%), Positives = 155/240 (64%), Gaps = 6/240 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L ++L + +++ LD++L T + +RLL+A+R+ AL GGK+IR L+ E
Sbjct: 12 SDLKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLET 71
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF+ + AL + A+E IHCYSL+HDDLP+MD+ +RRG+PTVHI YDE TAI+AG+
Sbjct: 72 VRLFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
LLT AF+++++P I+ +L+ L GL GM GGQMLD++ E D ++ +
Sbjct: 132 ALLTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIRK 191
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+Q MKTGAL+ F C GAI ++A + + ER+ FGE +G+ FQLADDLLD E L K
Sbjct: 192 LQSMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVEASPEQLGK 251
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 8/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + ++ N K + ++ DL+ L ++ Y+L +GGK++R L+
Sbjct: 2 LSTYIETNKKPFEKVMFDLIESE------PIPSELKESMLYSLKVGGKRLRPILLFAVLE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
FN+ V AA+E IH YSLIHDDLP+MD+ +RRGKPT HI + E TAI+AG+ L
Sbjct: 56 SFNLAPQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSL 115
Query: 124 LTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LT+AF++I+ + + LSL ++ + + + Q+ I
Sbjct: 116 LTHAFKVIAEDERLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIHV 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L+ FA +GAI+A A +L+ F +LG+ FQ+ DD+LD E
Sbjct: 176 NKTGRLIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVEGSTA 228
>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 295
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ + R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 4 AYQASSQARVNAALETLFSAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H Q+DE AI+AG+GL +
Sbjct: 59 GGQAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQK 182
AF + P M+S + G + + +
Sbjct: 119 LAFTALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHR 178
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ + A+ + + L+ + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKR 237
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + I+ L + + L A+RYA+L GGK++R LV
Sbjct: 31 FDLRAWSAGQLAAIERALSCWVASPD---EAPAPAGLCDAMRYAVLDGGKRLRPLLVMAA 87
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ N + TALR AIE IH YSL+HDD+P MDN +RRGKPTVH+QY E A++AG+
Sbjct: 88 CAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGD 147
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
L AFE+++ + +++L L G QGM GGQ +D+ + Q+
Sbjct: 148 ALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQLHE 207
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA AS LR +G +G+ FQ+ DD+LD D
Sbjct: 208 MHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAA 263
>gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [NC10 bacterium 'Dutch sediment']
Length = 312
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 84/254 (33%), Positives = 120/254 (47%), Gaps = 24/254 (9%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M L L E +D L+ L Q + + A+RY++ GGK++R L+
Sbjct: 1 MTPEELRRYLDERRLLVDEALEQYLPQ-----ASDPPKEIHEAVRYSVFAGGKRLRPILI 55
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
AL AAIE IH YSLIHDDLP+MD+ RRG+ T H Y E AI+
Sbjct: 56 LAATEAAGGQMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKD---------------NIRSQLMLSLTHNIGLQGMLGGQ 163
AG+ LLT AF ++S+ R ++ + G +GM+GGQ
Sbjct: 116 AGDALLTQAFILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQ 175
Query: 164 --MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ +D ID + + + KTGAL+ G I+A A + E L +GE +G+ F
Sbjct: 176 VVDMLQEDREIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAF 235
Query: 222 QLADDLLDCEEDLP 235
Q+ DD+LD E L
Sbjct: 236 QIVDDILDLEGSLE 249
>gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ L + K I++ LD L + + + + ++YA+L GGK++R L+
Sbjct: 3 FKNYLDNSKKLIESNLDIYLNELN------YPEVIAEGMKYAVLNGGKRLRPILLFMVLD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + + AAIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L
Sbjct: 57 ILDCDKEKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LT+AF I++ L +++ + G+ GM+GGQM+D + + ID + +
Sbjct: 117 LTHAFYILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG LM E I+ A + E+E L F E +G+ FQ+ DD+LD E D L K
Sbjct: 177 SNKTGKLMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDFSTLGK 234
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ G + ++ I+ LD + + A+RY + GGK++R L
Sbjct: 109 DFGFKPYMIRKAETINRALD-------KAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLA 161
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L +A+ ++E IH SLI DDLP MDN +RRGKPT H + E AI++G
Sbjct: 162 ACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 221
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDET 175
LL AFE ++ + + +++ L +IG +G++ GQ +D+
Sbjct: 222 GALLALAFEHLT--EADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLE 279
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KTGAL+ + GA++ S+ E E++R F +G++FQ+ DD+LD E
Sbjct: 280 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSE 339
Query: 233 DLPK 236
+L K
Sbjct: 340 ELGK 343
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 13/243 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L + ++ ++R+D + + L L+ ++RY++ GGK++R L+
Sbjct: 4 NFNLKNYIKFFAQRVDDWIRNYLTYENEQTIG-----LIESMRYSIFAGGKRLRPVLIYS 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F AA+E +H YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG
Sbjct: 59 SYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAG 118
Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
+ LLT AFEI+ + + L + G +GM+GGQ DI +E + +
Sbjct: 119 DALLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNT 178
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I K KT AL+ + CE GAI+ A + +K+ L FGE +G+ FQ+ DD+LD +
Sbjct: 179 LDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEE 238
Query: 234 LPK 236
L K
Sbjct: 239 LGK 241
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L S + L + + RL A+ Y+LL GGK++R L A
Sbjct: 2 DFKEELSCRSAFFERSLRTFCEEERRRI----PARLREAMNYSLLAGGKRLRPILCMAGA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN- 121
+ + L + A E H SLIHDDLP MDN +RRGKPT H+ Y E A++AG+
Sbjct: 58 EIMGEKAESVLPMATAFEMAHTASLIHDDLPCMDNDSLRRGKPTNHVVYGESLALLAGDA 117
Query: 122 -GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
L + + K + + + +G +G+ GGQ+LD + + F
Sbjct: 118 LFLDAFETALAGLLKNGAEPQRCVRALALFAQALGPEGICGGQVLDTDRASQTDERDFVV 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ MKT L+ + +GAI+A A RL +GEN+G+ FQ+ADDLLDC
Sbjct: 178 DVASMKTMVLIRASLCAGAILAGADGEALRRLMKYGENVGLAFQIADDLLDCTG 231
>gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
Length = 292
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 8/232 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+L+ + +++ L+ L L ++RY+LL GGK++R L A L
Sbjct: 3 KQRLELYRREVESFLEQCLDARR------MPATLYESMRYSLLAGGKRVRPVLCLVWAEL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ L + +ECIH YSL+HDDLP+MD+ +RRGKP+ H Q+ E AI+AG+GLL
Sbjct: 57 LGGDRQAVLPFASGLECIHTYSLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLL 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKM 183
T+AFE++ + +R+ +++ + + + + M
Sbjct: 117 THAFELMLHADLPAERLVRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMHGM 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ AC SGA++A A + + +R +G LG+ FQ+ADD+LD D
Sbjct: 177 KTGALLQVACTSGAVLAGAIEEDIQRAATYGGALGLAFQVADDILDVVGDEA 228
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L A + DRL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFQAPAPEL-----DRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
Length = 296
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 8/244 (3%)
Query: 1 MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSF 56
MN L K++ N + I L L + ++ + ++++ L ++RY++ GGK+IR
Sbjct: 1 MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60
Query: 57 LVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV A + +V ++E +H YSLIHDDLP MDN +RRGKPT H ++ +
Sbjct: 61 LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+GLLT +FE +S I+ L+L + + + +
Sbjct: 121 AVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLE 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
++ + KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD D
Sbjct: 181 ELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAK 240
Query: 234 -LPK 236
L K
Sbjct: 241 SLGK 244
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+++ A+ Y+L GGK+IR L+ + L AA+E IH YSLIHDDLP
Sbjct: 30 APEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLP 89
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
SMDN +RRGKPT H + E TAI+AG+GLLTY+FE+++ + +L+ L +
Sbjct: 90 SMDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLA-GTPDVSAEKLIRLVSLLAKS 148
Query: 154 IGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G +GM+GGQ ++ + + + ++ I K KTG L+ F+ + AI+A +++ + L
Sbjct: 149 AGPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLE 208
Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
+ ++G+ FQ+ DD+LD E K
Sbjct: 209 EYAFHIGLAFQIQDDILDVEGSEEK 233
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
MN S RI+T L+ L +RL A+RY++LGG K++R L
Sbjct: 1 MNPDFQSWAAACQARIETFLETRLPAAD-----CVPERLHKAMRYSVLGGGKRVRPLLSF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + V AA+E IH YSL+HDDLP MD+ +RRGKPT H++YDE TA++
Sbjct: 56 AAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHVEYDEATALLT 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L T AFE+++ + Q++ L G +GM GGQ D+ ++
Sbjct: 116 GDSLQTLAFELLAEKPLADIPETQLQMIAQLALASGSRGMAGGQAFDLDSVGKMLSLPEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
+ KTGAL+ A GA + + + +L F + +G+ FQ+ DDLLD
Sbjct: 176 EFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLDHFAKCVGLAFQVVDDLLD 228
>gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 298
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV
Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++
Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFEI+S K ++R +L+ +L G GM+GGQ +D+ E
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175
Query: 180 IQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
+ S + +K ++ L++ + + ++ A+RY LL GK++R L
Sbjct: 47 DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ AIE +H SLI DDLP MDN +RRGKPT HI + E AI+A
Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160
Query: 121 NG-----LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ + + +++ ++ + Q D
Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLE 220
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KT AL+ A GAIM S E ERLR + +G++FQ+ DD+LD E
Sbjct: 221 HLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSE 280
Query: 233 DLPK 236
+L K
Sbjct: 281 ELGK 284
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L+ L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLGRVEAALEHYLPA-----ETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF ++S L+L L + Q+ + +
Sbjct: 117 LQSQAFVALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHR 176
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GA+ A N L + +G+ FQ+ DD+LD D
Sbjct: 177 MKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ + + + + +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + E + ++ LD + + L A+RYALL GGK++R L
Sbjct: 69 FDFKAYMGERAVAVNRALDAAIPA------GEPPAALHDAMRYALLAGGKRVRPALCLAA 122
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ A+ AA+E +H SL+HDDLP MD+ +RRGKPT H+ Y E A++AG+
Sbjct: 123 CAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 182
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDE 170
LL+ +F ++S + D + + IG G + E
Sbjct: 183 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 242
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++ I KT AL+ + GAI+ + + ERLR + ++G++FQ+ DD+LD
Sbjct: 243 PVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 302
Query: 231 E---EDLPK 236
E+L K
Sbjct: 303 TKSSEELGK 311
>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
Length = 297
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L ++L + +RI+ L + L Q +N L+ A+ YA LLGGK++R FL+
Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
G+ L ++AFE+++ + + +Q+ + L + + I ++
Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELE 175
Query: 179 MIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ + G ++ K++L + E +G+ FQ+ DD+LD +
Sbjct: 176 RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIGNSE 234
>gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 298
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 141/240 (58%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV
Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++
Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFEI+S K ++R +L+ +L GM+GGQ +D+ E
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVKDGMVGGQAIDLAAETSTVPFDLP 175
Query: 180 IQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235
>gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5]
Length = 301
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+L+ ++ + ++ + L + + +T + A+ Y+ GGK++R L+ E
Sbjct: 8 NFKEELKRRTEEAEHVIREYLPEESGFAKT-----MAEAMNYSMTAGGKRLRPILIRETY 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AA+E IH +SLIHDDLP++DN RRG+ T H Y E +++G
Sbjct: 63 ELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDNDDYRRGRLTTHKVYGEAMGVLSGVA 122
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L ++S+ + M + G+ GMLGGQ +D++++
Sbjct: 123 LLNRAYEVMLSAFDLTGDKDRVIAAMRIIADKTGINGMLGGQSVDVENDGKPLEHKMLDY 182
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I K KT AL+ + +GA++A AS+ E + + EN+G+ FQ+ DD+LD +L K
Sbjct: 183 IYKNKTSALIEASMMTGAVLAGASEKELKVVEQAAENIGLAFQIQDDILDVTSTQEELGK 242
>gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
+ S + +K ++ L++ + + ++ A+RY LL GK++R L
Sbjct: 47 DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ AIE +H SLI DDLP MDN +RRGKPT HI + E AI+A
Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160
Query: 121 NG-----LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ + + +++ ++ + Q D
Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLE 220
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KT AL+ A GAIM S E ERLR + +G++FQ+ DD+LD E
Sbjct: 221 HLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSE 280
Query: 233 DLPK 236
+L K
Sbjct: 281 ELGK 284
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ + ++ I+ LD+ + + A+RYA L GGK++R L
Sbjct: 78 SFDFKPYMISKAETINRALDE-------AIPLIEPLNIHKAMRYAILAGGKRVRPILCLA 130
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDET 175
LL AFE ++ + + + + L +IG +G++ GQ D+ + +
Sbjct: 191 GALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KTG+L+ + GA++ ++ E E++R F +G++FQ+ DD+LD E
Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308
Query: 233 DLPK 236
+L K
Sbjct: 309 ELGK 312
>gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4);
farnesyltranstransferase [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ + ++ I+ LD+ + + A+RYA L GGK++R L
Sbjct: 78 SFDFKPYMISKAETINRALDE-------AIPLIEPLNIHKAMRYAILAGGKRVRPILCLA 130
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDET 175
LL AFE ++ + + + + L +IG +G++ GQ D+ + +
Sbjct: 191 GALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KTG+L+ + GA++ ++ E E++R F +G++FQ+ DD+LD E
Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308
Query: 233 DLPK 236
+L K
Sbjct: 309 ELGK 312
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 1 MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F+ + A+E IH YSL+HDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLTYAF+ I++ + ++ + +L+L L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KTG L+ FA +G+I++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEE 233
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + E R+D+ +L + + L ++ Y+L GGK++R LV
Sbjct: 12 TIHQYMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAAC 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ V A+E +H YSLIHDDLP+MD+ RRGKPT H + E +AI+AG+
Sbjct: 67 EAGGGSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDA 126
Query: 123 --LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
+ I ++ K + ++ L G +GM+GGQ ++ + Q+
Sbjct: 127 LLTHAFYSVIQAARKHGVPAERVLSIVEDLAVYAGPRGMVGGQVADMEGEQGITTLEQLE 186
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ F+ +G +A S ++ E LR FG ++G+ FQ+ DD+LD D K
Sbjct: 187 YIHLHKTSDLIMFSLMAGGHVAGCSDSQIESLRTFGHHIGLAFQIQDDILDLVGDESK 244
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ + +R + L +L + T +RL A+RYA+LGG K++R LV
Sbjct: 8 DFAAWMGAIQQRTEAALAGVLPE-----PTIAPERLHEAMRYAVLGGGKRVRPLLVHAAG 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ R+ A+E IH YSL+HDD+P MD+ +RRGKPTVH++YD+ TA++ G+
Sbjct: 63 AIGGAQPERLDRIACAVELIHAYSLVHDDMPCMDDDVLRRGKPTVHVEYDDATALLVGDA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L T AF++++S + ++ L G +GM GGQ +D +D ++ +
Sbjct: 123 LQTLAFQVLASAPVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLDLRELEFM 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + GA ERL + + G++FQ+ DD+LD E D
Sbjct: 183 HIHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVVDDILDAEADTA 237
>gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
Length = 303
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 105/242 (43%), Positives = 140/242 (57%), Gaps = 12/242 (4%)
Query: 2 NGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57
N LP ++QE + + LD+LL + RL A+RYA LG GK++R F
Sbjct: 7 NSDLPPLHERMQETADLVTMALDELLPRAEGF-----ESRLTEAMRYAALGPGKRLRPFF 61
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
E LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA+
Sbjct: 62 ALETGRLFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAV 121
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L T AFEI++S T +R +L+ L G QGM GGQM+D+ D V
Sbjct: 122 LAGDALQTVAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGV 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+Q+MKTGAL+ A E I+A A + E L F ++LG+ +Q+ADDLLD E D L
Sbjct: 182 ARMQRMKTGALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGDPDLL 241
Query: 235 PK 236
K
Sbjct: 242 GK 243
>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
Length = 297
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L ++L + +RI+ L + L Q +N L+ A+ YA LLGGK++R FL+
Sbjct: 1 MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V A+E IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
G+ L ++AFE+++ + + +Q+ + L + + I ++
Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELE 175
Query: 179 MIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ + G ++ K++L + + +G+ FQ+ DD+LD +
Sbjct: 176 RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIGNSE 234
>gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
Length = 296
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
++++ +KR++ L+ L RL A+RY+ + GGK++R LV E +
Sbjct: 4 SERIEDIAKRVNEALNRFLPTAEGP-----QKRLFEAMRYSAMAGGKRVRPMLVLEFCRM 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
AL A+E IH YSLIHDDLP MD+ RRG+P+ H+QYDE TA++AG+ LL
Sbjct: 59 CGGKEEQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALL 118
Query: 125 TYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ AFE Q ++ +R+ +L+ L + + I + +
Sbjct: 119 SLAFETGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLELLETM 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGA++ A G I+A A + + + LG+ FQ+ DD+LD + L K
Sbjct: 179 HRGKTGAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILDVTGNSQTLGK 237
>gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12]
gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12]
Length = 291
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 6/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV L
Sbjct: 3 KALFTRWCQRTDSYLERTLS-----IPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L
Sbjct: 58 FHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQ 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE ++ I L+ + +D + + + +K
Sbjct: 118 TLAFECLADAPADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G LM A GA+ S + L F LG+ FQ+ DD+LD E
Sbjct: 178 SGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSE 228
>gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 8/244 (3%)
Query: 1 MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSF 56
MN L K++ N + I L L + ++ + ++++ L ++RY++ GGK+IR
Sbjct: 1 MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60
Query: 57 LVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV A + +V ++E +H YSLIHDDLP MDN +RRGKPT H ++ +
Sbjct: 61 LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+GLLT +FE +S I+ L+L + + + +
Sbjct: 121 AVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLE 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
++ + KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD D
Sbjct: 181 ELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAK 240
Query: 234 -LPK 236
L K
Sbjct: 241 SLGK 244
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 12/242 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
N S + ++ L+ LL RL A+RYA+LGG K++R L
Sbjct: 5 NSDFQSWARSRQALVEEALNRLLPPAE-----VAPQRLHQAMRYAVLGGGKRVRPLLCYA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ AA+E IH YSL+HDDLP MD+ +RRGKPT H++YDE TA++AG
Sbjct: 60 AGEVSGAELERLSTAAAALELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L + AF++++ + + +++ L G +GM GGQ +D + + ++
Sbjct: 120 DSLQSLAFQLLAEYRVADSPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELE 179
Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
+ KTGAL+ + GA A + + +RL F + +G+ FQ+ DD+LD L
Sbjct: 180 FMHIHKTGALIRASVILGANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATL 239
Query: 235 PK 236
K
Sbjct: 240 GK 241
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + L K ++ LD +L RL SA+R++L GGK++R L A
Sbjct: 3 NLETYLARRQKAVNEALDRILADCVPG------GRLFSAMRHSLKAGGKRLRPILCMAAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AL G AIE IH YSL+HDDLP++DN +RRG+P H +DE TAI AG+
Sbjct: 57 EAVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDA 116
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L T AFE++S + R L+ ++ G GM+ GQM DI + + Q+
Sbjct: 117 LHTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKE 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ ++KTGAL+ + +GA+ A+ + +L + EN+G+ FQ+ADDLL+ E D K
Sbjct: 177 LHRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGK 236
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + + E + +++ L + + + L AI Y L GGK++R L A
Sbjct: 8 EIENYIFEQQQVVESALRKFVT-----GKAKKPRILHEAIDYCLFSGGKRLRPILCLAGA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N AL + A+ECIH YSL+HDDLPSMDN RRGKP++H Y E AI+ G+
Sbjct: 63 HAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMI 180
LL AFE+ S + SQ++ L G + ++ GQ+ D++ E + TQ+ I
Sbjct: 123 LLALAFEVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYI 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL+ + GA+ A A + + + +G LG+ FQ+ DD+LD +
Sbjct: 183 HCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQTTE 237
>gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
Length = 308
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 108/241 (44%), Positives = 146/241 (60%), Gaps = 8/241 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+L + ++ +T L LL + RL+ AIRY+ LGG K++R FLV E A
Sbjct: 9 DFAQRLDQTAEDTETQLASLLSDALLPDEIARPKRLMEAIRYSTLGGGKRLRPFLVVESA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F V AL VGAA+ECIHCYSLIHDDLPSMDN +RRG+PT+H YD+ TAI+AG+
Sbjct: 69 AVFGVPRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQVF 178
LLT AF+IIS + +R L +L G+ GM+GGQM + + + V
Sbjct: 129 LLTLAFDIISRDEIHPDAKVRLLLTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVA 188
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+Q+MKTGAL+ F C +GA++ AS + + L +G LG FQ+ADDLLD E D L
Sbjct: 189 RLQQMKTGALLRFGCIAGALLGQASPQQYQALDDYGRALGEAFQIADDLLDVEGDAAALG 248
Query: 236 K 236
K
Sbjct: 249 K 249
>gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1]
Length = 300
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 142/231 (61%), Gaps = 3/231 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+ L +++ I+ LD LL A + + + L+ A+R+ L GGK++R FLV + A
Sbjct: 3 EFMALLAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF++ +L +G A+EC+HCYSLIHDDLP+MDN +RRGKPTVH ++E TAI+AGN
Sbjct: 63 ALFDIPLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAGNA 122
Query: 123 LLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
LLT AFEII+ + I L+ +G L+ +++ D + +
Sbjct: 123 LLTLAFEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAIITL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
Q MKT AL+ FAC++GAI+ +AS+ + ++L FG +LG+ FQL DDLLD
Sbjct: 183 QHMKTAALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDVT 233
>gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB]
gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB]
Length = 299
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
L ++++ L + + L++A+ Y ALLGGK++R FLV
Sbjct: 2 DFARLLDVYQQQVNAALTRFIEPL-----PFQSSPLVNAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+
Sbjct: 57 EMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116
Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ + R ++ L G+ GM GGQ L + + +D Q+
Sbjct: 117 LQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A A + L + E +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVVGDTAVIG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
Length = 296
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 9/237 (3%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ +E SK + + +DD L+ T + L AIR++LL K++R LV
Sbjct: 5 ADFRELSKTLRSEVDDALVATTEY-GPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEAC 63
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+ A+E IH YSLIHDDLP+MD+ +RRG+P+ H ++ E T I+AG+ LL
Sbjct: 64 GYDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLA 123
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKM 183
AFE++++ ++ + L G ++GGQ D+ EF D + I +
Sbjct: 124 QAFEVLAADHLPGPV--VAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRR 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTGA++C + GAI+A AS L +GE LG+ FQ+ DDLLD E D K+
Sbjct: 182 KTGAMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGDQQLMGKR 238
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + + I+ +D++ ++ ++ + ++Y L GGK++R L
Sbjct: 2 NLKEYMNIRLEEINKTIDNVFDKSDIELENSF----IEMLKYPLDAGGKRLRPILTCLAC 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LFN ++ ++ A+E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ G+G
Sbjct: 58 ELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDG 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT+AF+++S + + LS I M L +++ I+ + ++
Sbjct: 118 LLTHAFQLLSKTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHA 177
Query: 183 MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGA++ A GAI + + + N+ E + +GE +G+ FQ+ DD+LD D L K
Sbjct: 178 KKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGK 235
>gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
Length = 309
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 92/247 (37%), Positives = 140/247 (56%), Gaps = 13/247 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALL-GGKKIRS 55
MN + L + R+D +L + L +S + RL A+ Y+L+ GGK+IR
Sbjct: 1 MNHDFSAFLMQTKTRVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRP 60
Query: 56 FLVTECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
LV A+ + R+ +IE IH YSLIHDDLP+MD+ +RRG+PT H
Sbjct: 61 VLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRA 120
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQ 168
+DE TAI+AG+ L AFE+++ T+ +I L+ LT G +GM+GGQ++D
Sbjct: 121 FDEATAILAGDALQARAFELLT-ELTECPPHIHLNLLRILTQASGQRGMVGGQLIDLESV 179
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
D+ ID Q+ I ++KTGAL+ + GA + A + + E+L C+G+ +G+ FQ+ DD+L
Sbjct: 180 DKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDIL 239
Query: 229 DCEEDLP 235
D E D
Sbjct: 240 DIEADTA 246
>gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15]
gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter
crescentus NA1000]
gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15]
gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter
crescentus NA1000]
Length = 294
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 6/234 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
L ++ + + + LD+LL + RL A+RYA LG GK++R F E
Sbjct: 2 SDLAKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALET 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVH QYDE TAI+AG+
Sbjct: 57 GKMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T AFEI++ P T ++RS+L+ L G +GM GGQM+D+ D V +Q
Sbjct: 117 ALQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQ 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ FA E I+A A ++E+ L F ++LG+ +Q+ DD+LD E D
Sbjct: 177 RLKTGALIAFAFEIPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGDEE 230
>gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 322
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
I+ ++ L + + + L I Y L LGGK++R L A LF ++
Sbjct: 1 MNSINHYREEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL AA+E H +SL+HDD+ MDN +RRGK TVH +++ AI++G+ +L A+ ++
Sbjct: 61 ALPAAAAVEVFHNFSLVHDDI--MDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLL 118
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + L + + M + Q + + KT L+
Sbjct: 119 ---DSYPPDTFAALAKLFSKTALEVCEGQQWDMDFETQAQVSIPQYLQMIRYKTAVLVGA 175
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
A + GAI+A AS + + FG +G+ FQL DD LD D KK
Sbjct: 176 ALQMGAIIAGASIENQRLIYDFGVTIGLAFQLQDDYLDTFGDEAFGKK 223
>gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
Length = 324
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + +L + +D ++++L + + L A + + GGK+IR L
Sbjct: 1 MRSEILKELNRARELVDAKIEEVLPR-------GGPEDLYDACWHLIEAGGKRIRPLLAI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + L A+E IH ++LIHDD+ MD RRG P VH+++ AI+A
Sbjct: 54 KSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDI--MDEDDERRGVPAVHVKWGVPVAILA 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AFE+ + ++ + + + E +
Sbjct: 112 GDTLFSKAFEVAAEGGDVEAVKELARACTEICEGQAMDIGF------ENRTEVTEDEFLE 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT AL+ +C G + A A++ + E LR +GENLGI FQ+ DD+LD D L K
Sbjct: 166 MIRKKTAALIRTSCVVGGLKAGANREQLEALREYGENLGIAFQIQDDVLDLVGDESELGK 225
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 281
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091]
gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091]
Length = 327
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+ ++ ID ++DD L + + L + Y + GGKK R L
Sbjct: 2 DVMEILKAYAEEIDVVIDDSLSKLE-------PESLYESSEYLIKAGGKKFRPALTLLSC 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AL+ AAIE H +SLIHDD+ MDN RRGKP VH + E AI+AG+
Sbjct: 55 QAVGGKPEKALKAAAAIELTHTFSLIHDDI--MDNDDTRRGKPAVHKVWGEPLAILAGDS 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
L +FE++S R L + N + G + ++ + + + +
Sbjct: 113 LFAKSFELLSQSAEDNIAYERVVDALQVLTNSCINICEGQALDMAFEDTFNVTKDEYMNM 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L+ + GAIM AS NE + LR +G+ +G+ FQ+ DD +D D
Sbjct: 173 IYKKTGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGDES 227
>gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021]
gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021]
gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
Length = 304
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 110/236 (46%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
P++L+ N+ ++ +L+ LL + LL A+R+ +L GGK++R FLV E
Sbjct: 6 SSFPARLKTNAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAES 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + ALR GAA+ECIHCYSL+HDDLP+MD+ +RRGKPTVH+ +DE TAI+AG+
Sbjct: 66 TALLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
LLT+AF+I+++P+T L D ++ L+L+L G GM GGQ LD+ E + ++
Sbjct: 126 SLLTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVL 185
Query: 181 -QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A A ++ RLR FG+ +G+ FQLADDLLD D
Sbjct: 186 LQSMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTADAA 241
>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
Length = 299
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 136/243 (55%), Gaps = 13/243 (5%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
MN L + L +R++ ++ L Q +++ + L+ A+ YA LLGGK++R FL
Sbjct: 1 MNNEYELKTDLVTFQQRVNQFIEQELKQYSAY-----HSPLIDAMAYAVLLGGKRVRPFL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI
Sbjct: 56 IYATGRMLGVSLEALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--T 175
+AG+ L T+AFE+I+ L D + + + SL G +GM GQ LD+ E +
Sbjct: 116 LAGDSLQTFAFELIA-KDPFLTDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLS 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ +I + KTGAL+ + G ++ + K L C+ + +G+ FQ+ DD+LD D
Sbjct: 175 ELELIHRNKTGALIVASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGD 234
Query: 234 LPK 236
K
Sbjct: 235 TDK 237
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 136/244 (55%), Gaps = 14/244 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
++ L S E +K I L +++ ++ S +L A+ Y+L+ GK+IR L
Sbjct: 20 IDFDLESYFAEKTKTIKNELINIINKSNSF------GQLSKAMEYSLISEGKRIRPILCI 73
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L AIE IH YSLIHDDLP++DN +RRGKPT H ++E TAI+A
Sbjct: 74 AAAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILA 133
Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--T 175
G+ LLT AF+++S + N +++ ++ G GM+ GQM DI E
Sbjct: 134 GDALLTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLN 193
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
++ + +KTGAL+ + ESGAI+A+AS ++ ++L+ + + +G+ FQ+ADDLL+ D
Sbjct: 194 KLEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPT 253
Query: 234 -LPK 236
K
Sbjct: 254 ITGK 257
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + E R+D+ +L + + L ++ Y+L GGK++R LV
Sbjct: 9 TIHQYMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAAC 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ V A+E +H YSLIHDDLP+MD+ RRGKPT H + E +AI+AG+
Sbjct: 64 EAGGGSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDA 123
Query: 123 --LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
+ I ++ K + ++ L G +GM+GGQ ++ + Q+
Sbjct: 124 LLTHAFYSVIQAARKHGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGITTLEQLE 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L+ F+ +G +A S + E LR FG ++G+ FQ+ DD+LD D K
Sbjct: 184 YIHLHKTSDLIMFSLMAGGHVAGCSDAQIESLRTFGHHIGLAFQIQDDILDLVGDESK 241
>gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ ++ R + L+ L T + L A+RYA+LGG K++R LV
Sbjct: 2 SDFATWMRAQGARTEAALEAALPSTDTI-----PYTLHEAMRYAVLGGGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GEVVGATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L + AF +++ R +++ L G GM GGQ +D+Q+ T+
Sbjct: 117 ALQSQAFIVLAQTPAL-AAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEG 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ + Q L + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTA 231
>gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 298
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + +++ ++ ID + + L + RL+ A+RYA + GGK++R LV
Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVA 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LFNV+ ALRVG AIECIH YSLIHDD+P MDN +RRGKPTVH +D+ +A+++
Sbjct: 56 ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFEI+S K ++R +L+ +L G GM+GGQ +D+ E
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175
Query: 180 IQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL F E+GAIM +++ ++RL+ + ++G+ FQ+ADDL+D E D
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 8/217 (3%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+++D L + + + ND L ++ Y L GGK++R L A + +
Sbjct: 12 LIEDFLQK----LPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCAC 67
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+E IH YSLIHDDLP++DN RRG+PT H + E TA++AG+GLLTY F++++S
Sbjct: 68 GLEMIHTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPV 127
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ +++ +G QGM+ GQ + + +Q+ I +KTGAL+ +
Sbjct: 128 -PLERQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRL 186
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GAI+ + E +L + LG+ FQ+ DD+LD E
Sbjct: 187 GAILGGGLEEEIRQLSIYAAALGLAFQIKDDILDIEG 223
>gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
Length = 322
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
K ++ + L S + + L +RY L LGGK++R L LF+ ++
Sbjct: 1 MKTVEQYREAFLDHLNSKLFVKEPRNLYEPMRYILQLGGKRLRPILTLIATDLFDADYHK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL AIE H +SL+HDD+ MD +RRG+ TVH +++ AI++G+ +L A++++
Sbjct: 61 ALNAAMAIEMFHNFSLVHDDI--MDKASLRRGETTVHKKWNTNIAILSGDAMLVKAYQLL 118
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
D + + + M + + + KT L+
Sbjct: 119 ---DDYPSDVFSLLTKILSRTALKVCEGQQWDMDFETQTEVSIPDYLQMIRYKTAVLIGA 175
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
A + G I+A+AS + + FGE LG+ FQL DD LD D K+
Sbjct: 176 ALQMGVIIANASPENQMPIYTFGEELGLAFQLQDDYLDAFGDESFGKR 223
>gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV L
Sbjct: 3 KALFTRWCQRTDSYLERTLS-----IPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L
Sbjct: 58 FHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQ 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE ++ I L+ + +D + + ++ +K
Sbjct: 118 TLAFECLADAPADTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G LM A GA+ S + L F LG+ FQ+ DD+LD E
Sbjct: 178 SGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSE 228
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 8/237 (3%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + ++L +++ L + S L++++ Y+L GGK++R L
Sbjct: 1 MNPQEMKAELGVLGALVESRLATIFADGRS------PSPLVASMEYSLMAGGKRLRPVLC 54
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + L AIECIH YSLIHDDLP+MD+ +RRGKP+ H ++DE TAI+
Sbjct: 55 LAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPAMDDDDLRRGKPSNHKRFDEATAIL 114
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GLLT AF + SS + + + +++ LS + + + Q+
Sbjct: 115 AGDGLLTEAFTLASSLELRPERILKAVFHLSTAAGPRGMVGGQVLDMGLTGKSASLPQLR 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ +C +G ++ +E+ + +G +G+ FQ+ DD+LD D
Sbjct: 175 EMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYGRAIGLAFQVTDDILDVIGDEA 231
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L ++ N +I+ + L+ + + + L ++ Y+L GGK+IR V
Sbjct: 1 MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A
Sbjct: 55 AVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF I++ + + I +LS+ ++ + +D T++
Sbjct: 115 GDALNTLAFGILARMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQ 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD+LD E +L K
Sbjct: 175 VHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGK 234
>gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73]
gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73]
Length = 301
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 104/233 (44%), Positives = 154/233 (66%), Gaps = 4/233 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L +++ ++ LD LL A + + + L++A+R+ +L GGK++R FLV + A
Sbjct: 3 EFTTLLAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F++ +L +G A+EC+HCYSLIHDDLP++DN +RRGKPTVH+ +DE TAI+AGN
Sbjct: 63 AIFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
LLT+AFEII+ + + L+ +LT GL GM+GGQMLD++ E + + I
Sbjct: 123 LLTFAFEIIAHKEAYSFSPKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQDESATIT 182
Query: 181 -QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q+MKT ALM FAC++GAIM AS+ ++L FG +G+ FQL DDLLD
Sbjct: 183 LQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLVS 235
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + S L K I+ L D L ++ Y+L GGK++R +V
Sbjct: 1 MTNKITSFLAGRKKTIENQLSIYTENLD------MPDSLKKSMLYSLEAGGKRLRPLIVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A
Sbjct: 55 AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I S ++ R +L+ L G +GM+GGQ ++ ++ + +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F +GAI+A A + + E LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHERKTAKLLSFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 15/235 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ S + ++ ++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 73 SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG
Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185
Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID 173
+ LL++AFE ++S + + + + L IG +G++ GQ++DI +
Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ I KT AL+ + AI+ S +E ERLR F +G++FQ+ DD+L
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDIL 300
>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
Length = 299
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 88/243 (36%), Positives = 136/243 (55%), Gaps = 13/243 (5%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
MN L + L +R++ ++ L Q ++H + L+ A+ YA LLGGK++R FL
Sbjct: 1 MNNEYELKTDLVTFQQRVNQFIEQELKQYSAH-----HSPLIDAMAYAVLLGGKRVRPFL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI
Sbjct: 56 IYATGRMLGVSLKALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--T 175
+AG+ L T+AFE+I+ L D + + + SL G +GM GQ LD+ E +
Sbjct: 116 LAGDSLQTFAFELIA-KDPFLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLS 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ +I + KTGAL+ + G ++ + K L C+ + +G+ FQ+ DD+LD D
Sbjct: 175 ELELIHRNKTGALIVASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGD 234
Query: 234 LPK 236
K
Sbjct: 235 TDK 237
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
L + + I+ +L+ L+ RL A+RYA+LGG K++R+ LV
Sbjct: 9 ADWLHDRALHIEQVLETLMPAAD-----IAPARLHEAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 65 FNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
VN + R AA+E IH YSL+HDDLP MD+ +RRG+PT H+Q+DE TA++
Sbjct: 64 CPVNSSLLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAML 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L AFE+++ +++ +L+ L + + ++
Sbjct: 124 AGDALQPLAFELLAGMPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQ 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGA++ + G ++A AS ++ L + + +G+ FQ+ DD+LD D
Sbjct: 184 TMHSMKTGAMLAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSA 240
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ ++L++ RI+ L + + S+ N L A++Y LLGGK++R FLV
Sbjct: 1 MSYQFGTELKQVQDRINQFLANQFEEIDSY-----NAHLRDAMKYGLLLGGKRVRPFLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIE IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+A
Sbjct: 56 ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L +AFEI++ + + QL+ L G+QGM GQ L + + ++ ++
Sbjct: 116 GDALQAFAFEILTEAPSL-SAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KTGAL+ A + G I + ++ +++L + + +G+ FQ+ DD+LD E D
Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSA 234
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
Length = 305
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+L+ +R++ +L L T N L+ A+++ ALLGGK++R FLV
Sbjct: 9 FEQQLKTYQQRVNKVLISTLSSL-----TFPNSPLVRAMQHGALLGGKRLRPFLVYAVGE 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F ++ AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L
Sbjct: 64 MFGLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDAL 123
Query: 124 LTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
AFEI+S + R +++ L G+ GM GGQ L+ + + ID + I
Sbjct: 124 QALAFEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQI 183
Query: 181 QKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL---PK 236
+ KTGAL+ A + GA A S + L + + +G+ FQ+ DD+LD K
Sbjct: 184 HRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIGSTEMIGK 243
Query: 237 K 237
+
Sbjct: 244 R 244
>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
Length = 295
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + R+DT L+ L + + +RL A+RY+++ GGK++R LV
Sbjct: 2 IAAYQKRCQTRVDTALEQLFQAPRTEL-----ERLYQAMRYSVMNGGKRVRPLLVYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+ L
Sbjct: 57 ALEGDIERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDAL 116
Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ L+ G GM+GGQ +D+ + Q ++
Sbjct: 117 QSLAFGVLADRRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIM 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + + ++ L + +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVALGALASGNTDELARKALLQYSRAIGLAFQVQDDILDVESDTA 232
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
N + ++ I+ LD+ + + A+RYA L GGK++R L
Sbjct: 78 NFDFKPYMINKAETINRALDE-------AIPLIEPLNIHKAMRYAILAGGKRVRPILCLA 130
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A++ A+E IH SLI DDLP MDN +RRGKPT H + E AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDET 175
LL AFE ++ + + +++ L +IG +G++ GQ +D+ +
Sbjct: 191 GALLALAFEHLT--EADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLE 248
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
+ I KTGAL+ + GA++ S+ E E++R F +G++FQ+ DD+LD E
Sbjct: 249 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSE 308
Query: 233 DLPK 236
+L K
Sbjct: 309 ELGK 312
>gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
Length = 296
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEGLFQPPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 126/226 (55%), Gaps = 10/226 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
K I+ L + + L A+ Y+L GGK+IR L+ S
Sbjct: 9 KEIEKHLAQYIADLRA------PAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRG 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ A+E +H YSLIHDDLP+MD+ +RRGKPT H + E AI+AG+GLLT++F +I+
Sbjct: 63 MQTACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIA 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMC 190
L D ++ +L+ L + G +GM+ GQ ++ +++ + ++ I KTG L+
Sbjct: 123 -EDPGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLR 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F+ +GA++ AS + E+ F ++LG+ FQ+ DD+LD E + K
Sbjct: 182 FSVLAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEK 227
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 9/237 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + K I+ ++++ ++ ++ + ++Y L GGK++R L
Sbjct: 2 NLKEYMNIRLKDINNNIENIFDKSDIELENSF----IEMLKYPLDAGGKRLRPVLTLLAC 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF ++ A+ ++E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ G+G
Sbjct: 58 ELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDG 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT+AF+++S + + LS I M L +++ I+ + ++
Sbjct: 118 LLTHAFQLLSKADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLHA 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT A++ A GAI + + N+ E + +GE +G+ FQ+ DD+LD D L K
Sbjct: 178 KKTAAMIRGAVRLGAISSE-NDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGK 233
>gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
Length = 297
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
Length = 297
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L + ++ +D LD L+ + RL A+RY+L GGK++R L
Sbjct: 1 MERELREFWEAGARAVDDALDALIP------PGKGAGRLHEAMRYSLFAGGKRLRPLLAM 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AL A+E +H YSLIHDDLP+MD+ RRG+PT H + E A++A
Sbjct: 55 AACEGAGGSLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLT AF +++ IR L+ + + G D D +
Sbjct: 115 GDALLTLAFGVLAKAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KTGAL+ + G + A A ++ +RL +G+ +G+ +Q+ DDLLD D
Sbjct: 175 RDLHRKKTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGDA 231
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
Length = 296
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPEL-----TRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 136/235 (57%), Gaps = 8/235 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+L E++ R+ LD LL + L SA+RYA LG GK++R FL E
Sbjct: 2 ENFEQRLNEHADRVTVALDALLPRAEGP-----EAHLNSAMRYAALGPGKRLRPFLTIEA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + LR A+ECIH YSLIHDDLP MD+ +RRG+PTVH YDE TA++AG+
Sbjct: 57 GHLVHADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
GL + A+EI++ P T + ++R++L+ L+ G GM+GGQM+DI+ E
Sbjct: 117 GLQSIAYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTR 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ +MKTGAL+ +A E+ I+ + L F +LG+ +Q+ DDLLD D
Sbjct: 177 MHRMKTGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGDE 231
>gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155]
gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155]
Length = 293
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE +R+D L L +L +A+ Y ALLGGK+IR FLV
Sbjct: 2 LVSAIQEYQQRVDNQLKQRLSTLE-----HTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234
>gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146]
gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 301
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+++ +R+D L L + L+ A+RY ALLGGK++R +LV
Sbjct: 2 ASFEQQMKTCHQRVDAALSRALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
SLF + AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 GSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ + D R Q++ L H G+ GM GGQ L+ + + +
Sbjct: 117 ALQTLAFSILADGQMPGVTDRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176
Query: 179 MIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A GA+ A +N L + +G+ FQ+ DD+LD D K
Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDRYAAAIGLAFQVQDDILDVVGDSSK 235
>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 341
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 8/243 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
++ L + ++E R++ L+ + A + L+ A+RYA+L GGK++R LV
Sbjct: 35 VDFELDTWMRERLDRVERALEAWITADAPQGVDHGAPAALVDAMRYAVLDGGKRLRPLLV 94
Query: 59 TEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
A L + ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E
Sbjct: 95 LAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEA 154
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+A++AG+ L AFE ++ + ++++L L G GM GGQ +D+ +
Sbjct: 155 SALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARAAGSSGMAGGQAIDLASVGLPL 214
Query: 175 TQVF--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T+ + ++KTGAL+ + GA A + L +G +G+ FQ+ DD+LD
Sbjct: 215 TENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLEAYGAAIGLAFQVVDDILDVTA 274
Query: 233 DLP 235
D
Sbjct: 275 DSA 277
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 131/236 (55%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQVIMTYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 295
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L E ++ ++ ++D LL Q RL SA+R++ GGK++R FLV + A
Sbjct: 3 DLQAALAECAEDVERMMDLLLPQ-----PEGAEARLYSAMRHSAFAGGKRLRPFLVMQSA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F V+ A RV AA+E +H YSLIHDDLP+MD+ +RRG+ + H ++DE TAI+AG+
Sbjct: 58 RQFGVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L AFE + P+T +R++L+ L G +GM GGQM+D + +D + +
Sbjct: 118 LQALAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRL 177
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q++KTG + F+ SGAI+ L + + G+ FQ+ DDLLD D
Sbjct: 178 QRLKTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGDSE 232
>gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1]
Length = 297
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
K E ++ L +T+ L+ A+ Y+L GGK+IR LV
Sbjct: 2 SDFKEKFSEYISLVEENLRKYNAH---SPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAF 58
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A AAIE IH +SLIHDDLP+MD+ RRG+ + H + E AI+AG+
Sbjct: 59 CNALGGDTGNAAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---F 178
L F +I+ + + +++ L +G GM+GGQ++D+Q+E ++
Sbjct: 119 ALSVLPFGLIADDEKL-SPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLR 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE---DL 234
+ + KTG L+ +C G I A + + E + +G LG+ FQ+ DD+LD +L
Sbjct: 178 NMYRHKTGELISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILDVTSTTEEL 237
Query: 235 PK 236
K
Sbjct: 238 GK 239
>gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
Length = 297
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +L++ I+ ILD L + +T +L A+ + GGK++R L+
Sbjct: 1 MN-EFDQELKKRISHIEKILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A
Sbjct: 55 ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
G+ LL YAFE SS + ++ + L G+ GM+GGQ ++++ +
Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD
Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITGQEE 234
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + L E + ++ L + L + +L ++ Y+L GGK++R LV
Sbjct: 1 MITDIKTYLHECAALVEKSLPEALPA-----EWNIPPQLRESMLYSLQAGGKRLRPALVL 55
Query: 60 ECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
A + AL V AIE IH YSL+HDDLP+MDN RRGK T H + E A
Sbjct: 56 AAAEAVHGQAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMA 115
Query: 117 IIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFI 172
I+AG+ LLT+AF +I + + + ++ L G +GM+GGQ + +
Sbjct: 116 ILAGDALLTHAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGIT 175
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ I KT L+ F+ +G + AS + E LR +G N+G+ FQ+ DD+LD
Sbjct: 176 SIEELEYIHLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIG 235
Query: 233 DLPK 236
D K
Sbjct: 236 DEKK 239
>gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1]
gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1]
Length = 305
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 157/236 (66%), Gaps = 4/236 (1%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M S L N++ ++ +L LL + + LL+A+R+ +L GGK++R FLV
Sbjct: 4 MTIPTFESLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLV 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E A+LF + +LRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE TAI+
Sbjct: 64 LESAALFEAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHRAFDEATAIL 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LLTYAF+II+ +T L+ IR+ L++ L G+ GM GGQ LD+ E + +V
Sbjct: 124 AGDSLLTYAFDIIADAETDLRPEIRADLVVKLATAAGMGGMAGGQALDLLAEKVPPDEVG 183
Query: 179 MIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++Q MKTGAL FACE+GAI+A AS ++ER+ FG +G+ FQLADDLLD
Sbjct: 184 IVQLQAMKTGALFRFACEAGAIVADASSADRERMSSFGAAIGLAFQLADDLLDLTA 239
>gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 12/244 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN + +L++N + L+ L ++ RL ++ Y+L GGK++R L
Sbjct: 2 MNDMVKRELEKNRVWFEDHLNSLCSSRPENI----PPRLWESMTYSLQAGGKRLRPILCV 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A L + A+E +H SLIHDDLP+MDN +RRGKPT H+ Y + AI+A
Sbjct: 58 KAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHMIYGDALAILA 117
Query: 120 GNGLLTYAFEI----ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G+ LL +AFE + +++ + + D +
Sbjct: 118 GDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGPSGICGGQVLDTDPASFTSSLS 177
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
V I KT L+ + +GAI+ ASQ +G +LG+ FQ+ DD+LD
Sbjct: 178 FVANIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPE 237
Query: 233 DLPK 236
+L K
Sbjct: 238 ELGK 241
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 114/234 (48%), Gaps = 7/234 (2%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L Q + I+ L+ L + SHM Q L A RY+LLGG K+IR L
Sbjct: 14 LEEFQQAALQHIEACLEKLFPE--SHMPYQS---LFDAARYSLLGGGKRIRPLLSLAVTQ 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A++ A+E IH YSL+HDDLPSMDN RRGKP++H + E AI+ G+ L
Sbjct: 69 ALTGTFTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFL 128
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQK 182
LTYAFE++ S I + L G + G M I +
Sbjct: 129 LTYAFEVLCSSPGLTAQQIVELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQHIHQ 188
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ A E GAI++ + E+ L+ FG +G+ FQ+ DD+LD K
Sbjct: 189 TKTGALITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLDITSSHAK 242
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 14/232 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
S + + ++ LD S + + ++ A RY+LL GGK++R L L
Sbjct: 15 SYIIRKADSVNKALD-------SAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELV 67
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH SLIHDDLP DN +RRGKPT H Y E A++AG+ LL+
Sbjct: 68 GGEESLAXPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLS 127
Query: 126 YAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDETQVFM 179
+AFE ++S +++ + + L IG +G++ GQ++DI + +
Sbjct: 128 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKF 187
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT AL+ + G I+ S E ERLR F +G++FQ+ DD+LD
Sbjct: 188 IHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 239
>gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
Length = 304
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 157/241 (65%), Gaps = 6/241 (2%)
Query: 1 MNG---GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+EN+ + + +L LL A + LL A+R+ +L GGK++R F
Sbjct: 1 MDAQMTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E +L + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TA
Sbjct: 61 LVIESVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLT AF+II+S L ++ L++SL G+ GM GGQ LD+ E +
Sbjct: 121 ILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDE 180
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D
Sbjct: 181 DGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADA 240
Query: 235 P 235
Sbjct: 241 A 241
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 9/237 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
L + S+ +DD L + RL A+RY LLGGK++R FLV + V
Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAP-RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T A
Sbjct: 62 KNELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 128 FEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
F I++ R +++ L G GM GGQ L + I ++ + + K
Sbjct: 122 FTILADHPMPDSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVHRHK 181
Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ A GA+ A + L+ + +G+ FQ+ DD+LD D L K+
Sbjct: 182 TGALIECAVALGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKR 238
>gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
Length = 291
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 6/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV L
Sbjct: 3 KALFTRWCQRTDSYLERTLS-----ILTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L
Sbjct: 58 FHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQ 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE ++ I L+ + +D + + + +K
Sbjct: 118 TLAFECLADAPADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G LM A GA+ S + L F LG+ FQ+ DD+LD E
Sbjct: 178 SGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIESSSE 228
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E+ ++ L + Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFLKESKTFVEENLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLTYAF+ I++ + ++ + +L+L L G +GM+ GQ ++ + + + ++
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTG L+ FA +GAI++ A++ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
Length = 290
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 3 INSLKEEVDQSLKAYFDKDREY-----NKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKS 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 58 DYKKILTPAIAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 117
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+I+ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 118 MKILVDYSLEEGISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGAI+A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 178 GELIKASIMSGAILAEASERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
Length = 292
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/235 (32%), Positives = 126/235 (53%), Gaps = 11/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L + L+E S+ +D L + R+ A+ Y+ L GGK++R L+ A
Sbjct: 3 DLSTYLKERSELVDGFLK-------IRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +A+E IH YSLIHDDLP MDN RRG+ T H + + A++AG+G
Sbjct: 56 DAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDG 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AFE+++ + + + +++ + G +GM+GGQ ++ +++ ++ ++ +
Sbjct: 116 LLTQAFEVMT-EQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL A SGA++ S++E L F G+ FQ+ DD+LD E D
Sbjct: 175 HEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSK 229
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L ++ N +I+ + L+ + + + L ++ Y+L GGK+IR V
Sbjct: 1 MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L+ N L VGA IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A
Sbjct: 55 AVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF I++ + I +LS+ ++ + +D T++
Sbjct: 115 GDALNTLAFGILARMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQ 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTGAL+ F+ E+GA++A AS+ ++ L+ + ++G+ FQ+ DD+LD E +L K
Sbjct: 175 VHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGK 234
>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
Length = 296
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL+A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLNAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185]
gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195]
gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223]
gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185]
gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195]
gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223]
gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678]
Length = 293
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE +R+D L +L +A+ Y ALLGGK+IR FLV
Sbjct: 2 LVSAIQEYQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234
>gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
fastidiosa 9a5c]
gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
fastidiosa 9a5c]
Length = 291
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 115/236 (48%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
M+ L +R D+ L+ L + TQ RL +A+RY +L GK+IR LV
Sbjct: 1 MSEAL---FTRWRQRTDSYLERTLS-----IPTQAPQRLHAAMRYTVLSRGKRIRPLLVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+
Sbjct: 53 AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AFE ++ + I L+ + +D + +
Sbjct: 113 GDALQTLAFECLADAPSDTSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKALEA 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +K+G LM A GA+ S + L F LG+ FQ+ DD+LD E
Sbjct: 173 MHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSE 228
>gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
Length = 297
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +L++ I+ ILD L + +T +L A+ + GGK++R L+
Sbjct: 1 MN-EFDQELKKRISHIEEILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E +F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+A
Sbjct: 55 ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
G+ LL YAFE SS + ++ + L G+ GM+GGQ ++++ +
Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I KT AL+ GA++A AS + + + G +G+ FQ+ DD+LD
Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITGQEE 234
>gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
Length = 301
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 125/239 (52%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+L+ +R D L L Q + L+ A+RY ALLGGK++R +LV
Sbjct: 2 ATFEQQLKAYRQRADAALSQALDN-----QPFGDGPLVGAMRYGALLGGKRLRPYLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 GRLFGCDLSALDAPAAAIECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF +++ P + D R ++ L H G+ GM GGQ L + + +D +
Sbjct: 117 ALQTLAFTLLTDSPMPGVADRDRLCMLSELAHASGVAGMCGGQALDLAAEGQRVDLAALE 176
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A GA+ A L + +G+ FQ+ DD+LD D K
Sbjct: 177 QIHRHKTGALIRCAVRLGALAGGNAGHAALTLLDRYANAIGLAFQVQDDILDVVGDSSK 235
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 295
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 135/238 (56%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L + N +++T + +L+ + L ++ Y+L GGK+IR V
Sbjct: 1 MENMLKQFIDHNIPQLETTMYELVESIKA------PAHLKESMLYSLKAGGKRIRPLFVV 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++N + T+ VG+A+E IH YSLIHDDLPSMD+ +RRGKPT H+ Y E A +A
Sbjct: 55 AVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNHVVYGEALATLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L T AF +I+ R +L+ L+ G +GM+GGQ +D + ++ ++
Sbjct: 115 GDALNTLAFGVIARLNNL-SAEKRIELVNLLSVAAGTEGMVGGQVLDMDGEKRLLNLKEL 173
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ F+ E+GA++A+AS +++E L + ++G+ FQ+ DD+LD E
Sbjct: 174 ETVHVNKTGALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDDILDIEGTSE 231
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L + +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDVDALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 123/238 (51%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ L + R++T LD +L + RL A+RY L GGK+IR L
Sbjct: 3 DHTLDDFRARCAARVETALDQILPPV-----SVQPSRLHEAMRYTVLAGGKRIRPLLAYA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++ A+E IH YSLIHDDLP+MD+ +RRG+PT H +DE TAI+AG
Sbjct: 58 AGEALGLDAALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
+ L T AF+ ++ L R ++ +L G +GM+GGQ +D++ E Q+
Sbjct: 118 DALQTLAFQALA-EAPGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLE 176
Query: 179 MIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ + + G + ++ ERL + + LG+ FQ+ DD+LD E D
Sbjct: 177 NIHIHKTGALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTA 234
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ + R + L+ L + RL A+RYA+LGG K++R L
Sbjct: 1 MSST-DDWVNALQARAERALEKTLPPANNP-----PKRLHEAMRYAVLGGGKRLRPLLTY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
V+ +A+E IH YSL+HDDLPSMDN +RRG PT H + E TA++A
Sbjct: 55 SAGIALGVSEAVLDAPASAVELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
G+ L AF ++ P + + + ++ L G +GM GGQ +D+ + T ++
Sbjct: 115 GDALQALAFRTLAEPTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEM 174
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA +Q+ E L F + +G+ FQ+ DD+LD E D
Sbjct: 175 ETMHRLKTGALIRASVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 135/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + ++ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEVELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I ++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
Length = 296
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 129/238 (54%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A+ YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMEYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G QGM GQ LD+ E ++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLNELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4]
gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens DM4]
Length = 320
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 7/238 (2%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E
Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G
Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ------MLDIQDEFIDE 174
+ L T AFE+ + P+ Q IR++L+L L GL GM+GGQ +D
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254
>gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
Length = 299
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFPQQLQACVEQANEALRRFIA-----PQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P + D R ++ L G+ GM GGQ L + + +D +
Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ + R + L+ +L RL A+RYA+LGG K++R LV
Sbjct: 1 MSST-DDWIGALQARTERALEQVLPPADKP-----PKRLHEAMRYAVLGGGKRLRPLLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+E IH YSL+HDDLPSMDN +RRG+PT H +DE TA++
Sbjct: 55 STGMALGASEAVLDAPASAVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
G+ L + AF I++ + L + + ++++ L +GM GGQ +D++ ++
Sbjct: 115 GDALQSLAFRILADSTSGLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA + E L F + +G+ FQ+ DD+LD E D
Sbjct: 175 ETMHRLKTGALIRASVLLGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
Length = 294
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 127/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L S Q N++++D LD RL+ A+RYALL GGK+ R FLV
Sbjct: 1 MIEALKSYQQRNNEQLDAWLDHY---------PFQEQRLIEAMRYALLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+F + AAIECIH YSLIHDDLP+MD+ +RRG+ T HIQ+DE TAI+
Sbjct: 52 ATGQIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I+S + + R ++ L H G GM GQ L+ ++ + +
Sbjct: 112 GDALQTLAFTILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LERIHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILDIVGDTE 231
>gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
Length = 296
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 140/243 (57%), Gaps = 11/243 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L L E ++ ID +L L +A+R+A + GGK++R LV
Sbjct: 1 MMLSLRDALDEVAQDIDRRFAQVLAD-----PGDPRASLYAAMRHAAIGGGKRLRPLLVF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LF+V+ A V A+E IH YSLIHDDLP+MD+ +RRGKPTVH +DE TAI+A
Sbjct: 56 ATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L AFEI++ P T +RS+L+L L G GM GGQM+D + + D V
Sbjct: 116 GDCLHALAFEILADPSTHPDPFVRSELILDLARASGPSGMAGGQMMDLEAERQIFDLPTV 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234
+Q+MKTGAL+C A E+GAI+ + LR + +LG+ FQ+ADDLLD E D
Sbjct: 176 TRLQQMKTGALICAAVEAGAILGRVPPEGRTHLRGYAHDLGLAFQIADDLLDAEGDEAVA 235
Query: 235 PKK 237
KK
Sbjct: 236 GKK 238
>gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044]
gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 299
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFPQQLQACVEQANEALRRFIA-----PQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P + D R ++ L G+ GM GGQ L + + +D +
Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From
Agrobacterium Tumefaciens
Length = 335
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 157/241 (65%), Gaps = 6/241 (2%)
Query: 1 MNG---GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+EN+ + + +L LL A + LL A+R+ +L GGK++R F
Sbjct: 32 MDAQMTNFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPF 91
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E +L + L VGAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVH ++DE TA
Sbjct: 92 LVIESVALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATA 151
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLT AF+II+S L ++ L++SL G+ GM GGQ LD+ E +
Sbjct: 152 ILAGDSLLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDE 211
Query: 177 VFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+I Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD D
Sbjct: 212 DGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADA 271
Query: 235 P 235
Sbjct: 272 A 272
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 87/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++T G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEEALKACYTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
Length = 303
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 5/240 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +L+ + ++D L + RL A+ Y+L GGK+IR L
Sbjct: 1 MNPERQQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCL 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A+ + A E IH SLIHDDLP MD+ +RRGKPT H + E A++A
Sbjct: 61 AAAEQCGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLA 120
Query: 120 GNGLLTYAFEI----ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G+ LL +AFE + + +++ + + D Q + D
Sbjct: 121 GDALLAWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRDTDPQSQSEDPE 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V++I + KT L+ A GA++A A + +G +LG FQ+ DD+LD D
Sbjct: 181 DVWLIARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLDVLGDSA 240
>gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23]
gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1]
gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23]
gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 291
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 6/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ +R D+ L+ L + TQ RL +A+RY +L GGK+IR LV L
Sbjct: 3 KALFTRWCQRTDSYLERTLS-----IPTQAPQRLQAAMRYTVLSGGKRIRPLLVYAAGHL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+V+ AA+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+ G+ L
Sbjct: 58 FHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQ 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE ++ I L+ + +D + + + +K
Sbjct: 118 TLAFECLADAPADTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G LM A GA+ S + L F LG+ FQ+ DD+LD E
Sbjct: 178 SGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIESSSE 228
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 10/226 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D+ + S + + A+RY+LL GGK++R L L + TA+ A+
Sbjct: 21 DNSISSVKSLKKRTEPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 80
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-L 138
E IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL AFE ++ + +
Sbjct: 81 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLV 140
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFAC 193
+ ++ L IG +G++ GQ++D+ E ++ V I KT AL+ A
Sbjct: 141 ASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAA 200
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAIM ++ E E+LR + +G++FQ+ DD+LD E+L K
Sbjct: 201 VIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 246
>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 298
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 138/244 (56%), Gaps = 13/244 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + + ++ +K++D+ L+ ++ + ++ D L+ A+RY+L GGK++R L+
Sbjct: 1 MKLDINNYIKFWAKKVDSWLEQYVISNSQYI-----DGLVEAMRYSLFAGGKRLRPALIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+F+ AA+E +H YSLIHDDLP+MD+ +RRGKPT H+ Y E AI+A
Sbjct: 56 SSFGIFDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILA 115
Query: 120 GNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLT AFEI+ SS + + + L G +GM+GGQ D++ E
Sbjct: 116 GDALLTKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDG 175
Query: 178 F--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ + CE GAI+ +A+ EK+ + FG+ +G+ FQ+ DD+LD E
Sbjct: 176 TVSFIHLNKTAALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTE 235
Query: 233 DLPK 236
+L K
Sbjct: 236 ELGK 239
>gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
Length = 300
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 3/235 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ L +++ + L+ LL + + LL A+RY +L GGK +R F V + A
Sbjct: 3 EFTTLLAKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQSA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF+V AL VG A+ECIHCYSLIHDDLP+MDN +RRGKPTVH +DE TAI+AGN
Sbjct: 63 ALFDVPPEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAGNA 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
LLT+AFEII+ L R L+ +L GL GM+GGQ+LD + + D T++ +
Sbjct: 123 LLTFAFEIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKILTL 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+MKT AL+ F+C++GAIM +AS + ++ FG +G+ FQL DDLLD
Sbjct: 183 QRMKTAALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLDVTSSTE 237
>gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens AM1]
gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Methylobacterium extorquens AM1]
Length = 320
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 7/238 (2%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
G +L + + ++T L DLL T + RL+ A+R+A+LGG K++R FL E
Sbjct: 17 TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G
Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ------MLDIQDEFIDE 174
+ L T AFE+ + P+ Q IR++L+L L GL GM+GGQ +D
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGA++ F+ E+GA++ A+ +E+ L +G+ LG FQ+ADD+LD E
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I ++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L + +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDVDALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLEKM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231
>gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
Length = 300
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ LQ+ +RI+ L+ + + L A++Y LLGGK+IR FLV
Sbjct: 8 FSNDLQQAQQRINRFLEAQFDEINTR-----PSPLADAMKYGLLLGGKRIRPFLVYATGR 62
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + AAIE IH YSLIHDDLP+MDN +RRG+PT HI +D TAI+AG+ L
Sbjct: 63 MLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDHATAILAGDAL 122
Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+AFEI++ + +R +LS + + L + + I +++ I +
Sbjct: 123 QAFAFEILTKSTALSAEQKLRLIQVLSHNSGVFGMCLGQSLDLISEHKQISLSELEQIHR 182
Query: 183 MKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A + G I + A + +L + +G+ FQ+ DD+LD E DL
Sbjct: 183 NKTGALLSAALKMGFICSSHFADNALEAKLDRYAAAIGLAFQVQDDILDIEGDLA 237
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ E I++ L+ L T RL A+RYA+L GGK++R L
Sbjct: 1 MHPDFQLWTTERLALIESFLEQNLPAT-----NCAPARLHEAMRYAVLNGGKRVRPLLSF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + + AA+E IH YSL+HDDLP MDN +RRGKPT HI+Y E TA++
Sbjct: 56 AAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLV 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L + AF++++ + +++ L G +GM GGQ +D+ ++
Sbjct: 116 GDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA ++++ ++L F + +G+ FQ+ DD+LD E
Sbjct: 176 EFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDDILDAEASTA 234
>gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
Length = 296
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 94/240 (39%), Positives = 137/240 (57%), Gaps = 7/240 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ L L + + L++ L+ + RL +A+ + AL GGK++R FLV
Sbjct: 1 MSDTLSDYLITRANLVTKSLENRLVINRTESPALG--RLRAAMAHGALGGGKRLRPFLVL 58
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E AS+F + AL AIE +HCYSLIHDDLP+MD+ RRG+P+VH YDE AI+A
Sbjct: 59 EAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILA 118
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GLLT AF +++ T +L+ L G GM+GGQM+D+ + DE +
Sbjct: 119 GDGLLTDAFALLTEEGTYTAPTAC-RLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVG 177
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
IQ+ KTGAL+ A GAI+ A+ +++ LR + +G FQ+ DD+LD +L K
Sbjct: 178 IQRRKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILDETASSAELGK 237
>gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175]
Length = 293
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE +R+D L +L +A+ Y ALLGGK+IR FLV
Sbjct: 2 LVSAIQEFQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234
>gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42]
gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
Length = 296
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 135/240 (56%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L + L + I+ L + A + L ++ Y+L GGK++R +V
Sbjct: 1 MTNKLDAFLASRKQLIEQQLSLYTERLA------MPETLKKSMLYSLEAGGKRLRPLVVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114
Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I+S ++ + R +L+ L G +GM+GGQ ++ + + I +
Sbjct: 115 GDGLLTESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F+ +GAI+A A ++E E+LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T ++L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDAAALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 8/226 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
++++ L + + +RL A+RY+LL GGK++R L E ASLF L
Sbjct: 17 EVIEEYL-EGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSA 75
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AAIE IH +SLIHDDLP+MDN RRGKPT H ++ E AI+AG+ + +I+ +
Sbjct: 76 AAIELIHTFSLIHDDLPAMDNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQE 135
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACE 194
++ L H GL G+ GGQ LD++ ++ + KTGAL+ +
Sbjct: 136 G-SAEQVLAVVRELAHATGLAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASAR 194
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAI+A A + E + + LG+ FQ+ DD+LD L K+
Sbjct: 195 IGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKR 240
>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
Length = 296
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ L SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLETQLEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYTT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMI 180
L ++AFEI++ + + + + + + L + + I +++ +I
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELELI 176
Query: 181 QKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A + G I + A + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGDSA 233
>gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
Length = 325
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L L S + + L I+Y+L +GGK+IR L+ L+ + + L V
Sbjct: 5 NELLQILNQYIDSIVFDRKPASLYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPV 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+A+E H Y+L+HDDL MDN +RRG+PTVH +++ TAI++G+ +L +A+++++
Sbjct: 65 ASALETYHNYTLLHDDL--MDNALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECN 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ Q M + E++ + ++KT L+ + +
Sbjct: 123 VDKLKEVLDLFTITALEIGEGQQ---YDMDFELRNDVAESEYIEMIRLKTSVLLACSMKI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A A + L FGE +G+ FQL DD LD D
Sbjct: 180 GAILAGAPSEDANNLYRFGELIGLAFQLQDDYLDVYGDSK 219
>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 306
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
++ R++ L + + L A+RYA+L GGK++R LV
Sbjct: 15 FDFDGWMRAQLARVEDAL-------SHWVCPDAPAGLGEAMRYAVLDGGKRLRPLLVLAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+ + E A++AG+
Sbjct: 68 CEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGD 127
Query: 122 GLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L AFE+++ R L+ L + E Q+ +
Sbjct: 128 ALQALAFELLTPEDGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQM 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + GA+ + L +G +G+ FQ+ DD+LD +D
Sbjct: 188 HRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSA 242
>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
Length = 296
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T V AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237]
gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237]
Length = 324
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+RI+ ++ + + + L I Y L LGGK++R L A +F ++
Sbjct: 1 MQRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +I
Sbjct: 61 ALDAALAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGD------AMLI 112
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
++ + L+ + + GQ D+ E D+ + + + KT L
Sbjct: 113 TAYQLFENYEGEVFRSLAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ A + GAI+A+AS ++ + FG NLGI FQL DD LD D
Sbjct: 173 VGAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGD 217
>gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
NGR234]
gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
NGR234]
Length = 360
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 111/234 (47%), Positives = 161/234 (68%), Gaps = 3/234 (1%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
P +L+ + ++++L +LL +A + +LL A+R+ +L GGK++R FLV E +
Sbjct: 64 FPERLKAAALAVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTA 123
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 124 LLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSL 183
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--Q 181
LT+AF+I+++P+T L D ++ L+L+L GL GM GGQ LD+ E + ++ Q
Sbjct: 184 LTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQ 243
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ FACE+GAI+A A ++ RLR FGE +G+ FQLADDLLD D
Sbjct: 244 AMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTADAE 297
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L + +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDADALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLEKM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L +DT L + + +N + A+ Y++ +GGK+IR L ++N
Sbjct: 3 LNSYKDEVDTWLKEYFKD-----KGTYNKSVYEAMSYSVNIGGKRIRPILALITYKIYNK 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N+ AL + AIE IH YSLIHDDLP MD+ RRGKPT H + + A++AG+GLL A
Sbjct: 58 NYKEALSIACAIEMIHTYSLIHDDLPCMDDDL-RRGKPTNHKVFGDGLAVLAGDGLLNEA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
F II K + + G++GM+GGQ++D ++ I+ ++ I + KT
Sbjct: 117 FNIILKNG-CQKGMTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ + +GAI+ A++ + L+ FG+ LG+ FQ+ DD+LD E D K
Sbjct: 176 AALITASIMTGAILGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRK 226
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++++ + I+ L + L + ++ + A+ Y+L GGK+IR L
Sbjct: 3 NFMDRIKKMGEEIELWLKEYLDN-----KGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTY 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
SL+ ++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+
Sbjct: 58 SLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
LL A I+ + + ++ G+ GM+GGQ++D +D+ I +++ +
Sbjct: 118 LLNEAMNIM-FEYSLKNGEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYM 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
K KTGAL+ + +GAI+ + + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 HKKKTGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 236
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L ++ N+ +I+ + L+ Q + L ++ Y+L GGK+IR V
Sbjct: 1 MNEPLKYFIESNTPQIEETMFSLVEQIDA------PADLKESMLYSLKAGGKRIRPLFVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L+ N L VG+ IE IH YSLIHDDLPSMDN RRGKPT H Y E A +A
Sbjct: 55 AVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF I++ + I +LS+ ++ + ++ ++
Sbjct: 115 GDALNTLAFGILARMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQ 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTGAL+ F+ E+GA++A S ++ L+ + ++G+ FQ+ DD+LD E +L K
Sbjct: 175 VHVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGK 234
>gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 309
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 93/241 (38%), Positives = 142/241 (58%), Gaps = 12/241 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L L + ++ LD LL + R++ A+RYA+L GGK++R+FLV E
Sbjct: 15 SALKEALTRRAHEVEAALDRLLP-----VPPGPESRVVEAMRYAVLNGGKRLRAFLVLES 69
Query: 62 ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A+LF + +R A++E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG
Sbjct: 70 AALFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAG 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
+ L T AFE+++ T R L+L+L +G GM+GGQM+D+ E QV
Sbjct: 130 DALQTSAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVG 189
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ +KTG L+ ++ E+G I+ A+ ++E L +G +LG FQ+ DD+LD E +L
Sbjct: 190 RLHALKTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTEGTAEELG 249
Query: 236 K 236
K
Sbjct: 250 K 250
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + + + ++ L L +T +D L A+ Y+L GGK++R L+ A
Sbjct: 1 MKERWRARQEMVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L V A+E IH YSLIHDDLP+MDN RRGK T H + + AI+AG+GL
Sbjct: 56 AVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LT AF +I + + +++ ++ G +GM+GGQ L ++ I ++ +
Sbjct: 116 LTLAFTVILRQQDV-SADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL A SGAI+ AS+ + L + E G+ FQ+ DD+LD D+ K
Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGK 232
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 9/235 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
++ R++ L + A L A+RYA+L GGK++R LV
Sbjct: 20 FDFNDWMRAELARVEEALSRWVCHDA-------PAGLGEAMRYAVLDGGKRLRPLLVLAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ E A++AG+
Sbjct: 73 SHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGD 132
Query: 122 GLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L AFE+++ R L+ L + E Q+ +
Sbjct: 133 ALQALAFELLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHM 192
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ + GA+ + + L +G +G+ FQ+ DD+LD +D
Sbjct: 193 HSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSA 247
>gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ LD L + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 124/236 (52%), Gaps = 14/236 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ + + + L+ L + +RL A+RY+LL GGK++R L E A LF
Sbjct: 11 ERHRRIFEEYLEGLRFTEEPAL-----ERLQEAMRYSLLAGGKRVRPLLCMESARLFGAP 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AAIE IH YSLIHDDLP+MDN RRG+PT H ++ E AI+AG+ A
Sbjct: 66 PERVLPSAAAIELIHTYSLIHDDLPAMDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEAL 125
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMK 184
+I+ + R ++ L + G+ GM+GGQ+LD+ D +FMI + K
Sbjct: 126 TLITVRQEGT-CEQRLGVVQELASSTGVNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYK 184
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + GAI+A A + E + + LG+ FQ+ DD+LD L K+
Sbjct: 185 TGALIRSSARVGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKR 240
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 11/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L L++ +I+ + L ++ Y+L GGK++R L
Sbjct: 1 MNFELKKYLKDKKAKIEEFIKSYFQTF------PTPPILHDSVLYSLTAGGKRLRPILCI 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+A
Sbjct: 55 ASYEACDG-MENIVPYATAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILA 113
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
G+GLLT AF I+S+ + N +++ ++ GL+GM+ GQ D+ E + +
Sbjct: 114 GDGLLTEAFTILSNKDYANISSNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERV 173
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT A++ + + GAI+A AS+ + + L +G+++G+ FQ+ DD+LD E
Sbjct: 174 VEFIHLYKTAAMIKASVKVGAILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIEGTTE 232
>gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 301
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L+ +R D L + + +L++A+RY ALLGGK++R +LV
Sbjct: 4 FEQLLKTYHQRADAALIQYIEPL-----PFADGQLVAAMRYGALLGGKRLRPYLVYATGE 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F ++ AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+ L
Sbjct: 59 MFGLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNLRRGQPTSHIKFGEAHAILAGDAL 118
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
T AF I++ P + + R ++ L G+ GM GGQ L+ + +++D + I
Sbjct: 119 QTLAFSILADSPMPDVAVSDRLAMLSELAQASGVAGMCGGQALDLEAEGKYVDLQSLERI 178
Query: 181 QKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ A GA+ A + + L + +G+ FQ+ DD+LD D K
Sbjct: 179 HNHKTGALIRCAIRMGALAAGDTGRAALPLLDRYAAAIGLAFQVQDDILDVIGDSEK 235
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
Length = 295
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D L+ L + +Q RL A+RY+++ GGK++R LV
Sbjct: 2 IKAYQASCQARVDAALEPLFQPPRAELQ-----RLYEAMRYSVMNGGKRVRPLLVYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE +AI+AG+GL
Sbjct: 57 ALDGNLDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGL 116
Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AFE+++ + +R Q++ +L+ G GM+GGQ +D+ Q +
Sbjct: 117 QSLAFEVLADRRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A + + L + +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTA 232
>gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289]
gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289]
Length = 324
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 13/227 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D ILD + + + L IRY L LGGK+IR L+ +LF + T L
Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL + V + L + +++ +
Sbjct: 65 ACALETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAI-------LSGDSMLVLAFER 117
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
Q D+ + +L L L+ G Q + D T+ + ++KT L+ A
Sbjct: 118 MQQCDDRHLRDVLRLFTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLACAV 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ GA++A A + E L FGE +G+ FQL DD LD D KK
Sbjct: 178 KLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224
>gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + T L I Y L LGGK+IR LV +L+ N A+
Sbjct: 3 AFNDILQKIEQEITRLQFTYPPKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAI 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +E H ++L+HDDL MD RR KPTVH +++ TAI++G+ +L A+++I
Sbjct: 63 KPALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGE 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
K++ I + G Q M + E + + ++KT L+ A
Sbjct: 121 TKSESLKEILDLFTRTALEICGGQQ---YDMEFESRTDVTEAEYIEMIRLKTAVLLACAL 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GAIM +A + + E L FG N+G+ FQL DDLLD D
Sbjct: 178 KMGAIMGNAPEADAEALYQFGINIGLAFQLQDDLLDVYGDTA 219
>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
Length = 290
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 3 INSLKEEVDQSLKAYFNKDREY-----NKVLYDSMAYSINVGGKRIRPILMLLSYYIYKS 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 58 DYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 117
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 118 MKVLVDYSLEEGTSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 178 GELIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + + + I+ L + L A+RYA+L GGK++R LV
Sbjct: 10 FTLSAWSAQQLETIEQALSRWVAC---PTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAA 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N N ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ E A++AG+
Sbjct: 67 CEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
L AFE ++ + +++L L G QGM GGQ +D+ + Q+
Sbjct: 127 ALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHE 186
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + G A + LR +G +G+ FQ+ DD+LD D
Sbjct: 187 MHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSA 242
>gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC
25259]
gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259]
Length = 296
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M + Q RI+ +L + L RL A+RYA+LGG K++R L
Sbjct: 1 MMSDFSAWTQACQARIEHVLAERLP-----PSDIAPKRLHEAMRYAVLGGGKRVRPLLAF 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AA+E IH YSL+HDD+P+MD+ +RRGKPTVH+++DE TA++
Sbjct: 56 AAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEPTALLV 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
G+ L + AF+I++SP + + ++ L G +GM GGQ +D+ + D T++
Sbjct: 116 GDALQSLAFDILASPGLAQAASTQLAMVQLLARASGSRGMAGGQAIDLANVGKSLDLTEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA S+ + L + + +G+ FQ+ DD+LD E
Sbjct: 176 EFMHIHKTGALIRASVLLGAECGTLSEPARTALDHYAKCIGLAFQVVDDVLDAEASTA 233
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 12/241 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + L ++ L+ L ++ L ++RY+LL GGK+IR L
Sbjct: 8 AIEAYLNRCKYAVEQFLESLFVKELG----TDYGTLAESMRYSLLAGGKRIRPVLAMAAM 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + + A +E IH YSLIHDDLPSMD+ +RRGKPT H+ Y + TAI+AG+
Sbjct: 64 EALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDSLRRGKPTNHVIYGDATAILAGDA 123
Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
LLT+AF ++S P IR +++ L+ G+ GM+GGQ +DI E + + +
Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSLE 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ + KTGAL+ + GA++ AS ++ ERL +G+ +GI FQ+ADDLLD E D L
Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAALLG 243
Query: 236 K 236
K
Sbjct: 244 K 244
>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
Length = 290
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 3 INSLKEEVDQSLKAYFNKDREY-----NKVLYDSMAYSINVGGKRIRPILMLLSYYIYKS 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 58 DYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 117
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+I+ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 118 MKILVDYSLEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 178 GELIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231
>gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3);
farnesyltranstransferase [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG G++ GQM+D+ E ++ +V
Sbjct: 177 ALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 296
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 122/236 (51%), Gaps = 9/236 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
L + S+ +DD L + RL A+RY LLGGK++R FLV + V
Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAP-RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T A
Sbjct: 62 KRELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 128 FEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
F I++ + R +++ +L G GM GGQ L + I ++ + + K
Sbjct: 122 FSILADHPLPDRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLPELEQVHRHK 181
Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
TGAL+ A GA+ A L+ + +G+ FQ+ DD+LD D L K
Sbjct: 182 TGALIECAVALGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGDTVTLGK 237
>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
Length = 290
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 3 INSLKEEVDQSLKAYFNKDREY-----NKVLYDSMAYSINVGGKRIRPILMLLSYYIYKS 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 58 DYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 117
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+I+ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 118 MKILVDYSLEEGISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 178 GELIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231
>gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 291
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 117/234 (50%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
+ + L+ + ++ L L T + RL A+ Y+L+ GK++R LV A
Sbjct: 1 MQTYLEACKEAVNAFLARLFE------PTGLHARLKEAMNYSLMADGKRLRPALVIATAE 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F V L AA+E IHCYSLIHDDLP MD+ +RRG+PT H+ + E A++AG+ L
Sbjct: 55 TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LT AF +++ P + + ++ +L G+ GM+GGQ ++ V I
Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVEFIH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ E G A + L C+GE LG+ FQ+ DD+LD
Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTE 228
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 124/227 (54%), Gaps = 11/227 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
R+D L+ L A ++L +A+RY+L GGK+IR L A L
Sbjct: 11 QSRVDQYLEQQLSDYAP------ANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSL 64
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AA+E IH YSLIHDDLP+MDN +RRGKPT HIQ+DE TAI+AG+ L T+AFE++
Sbjct: 65 TDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFELL 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALM 189
S+P + + +L+ L G GM+ GQM+D+ E + + ++ + KTGAL+
Sbjct: 125 SNPTSAQP-ELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALI 183
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ + +L + +G+ FQ+ DD++D D
Sbjct: 184 KASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTE 230
>gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
Length = 324
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + + + L I+Y L LGGK+IR L+ +L+ N T L
Sbjct: 5 NELLTIVNEYLNNLPYNRKPSSLYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSS 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MD +RRG+ TVH +++ AI++G+ +L A+E ++
Sbjct: 65 ACALETYHNYTLLHDDL--MDEAPLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQVD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
T+ + + + Q M + + + ++KT L+ A +
Sbjct: 123 TKHLQAVLNLFTETALQIGEGQQ---YDMEFEHRNDVTVDEYIEMIRLKTSVLLACATKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
GA++A AS + E L FGE +G+ FQL DD LD D KK
Sbjct: 180 GALLADASAEDAENLYKFGEQIGLAFQLQDDYLDVYGDSKVFGKK 224
>gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
Length = 324
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 13/227 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D ILD + + + L IRY L LGGK+IR L+ +LF + T L
Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL + V + L + +++ +
Sbjct: 65 ACALETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAI-------LSGDSMLVLAFER 117
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
Q D+ + +L L L+ G Q + D T+ + ++KT L+ A
Sbjct: 118 MQQCDDRHLRDVLRLFTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLACAV 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ GA++A A + E L FGE +G+ FQL DD LD D KK
Sbjct: 178 KLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224
>gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 312
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ +L + KR++T L L + +N LL +RY+ L+GGK++R +LV
Sbjct: 13 SFDFDQQLSKYQKRVETYLSSALDKL-----PAYNTVLLDVMRYSTLMGGKRLRPYLVYA 67
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ ++ AAIECIH YSL+HDDLPSMDN +RRG+ T H+++ E AI+AG
Sbjct: 68 TGQMLGLSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAG 127
Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L + AF I++ + R ++ L G GM GGQ + + I +
Sbjct: 128 DSLQSLAFSILADDRMPDVVTEDRLAMLSELARASGATGMCGGQALDMASEYLDISLETL 187
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+I KTGAL+ A GA+ A + + L + +++G+ FQ+ DD+LD +
Sbjct: 188 ELIHHHKTGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILDEIGEARK 247
Query: 234 LPKK 237
KK
Sbjct: 248 TGKK 251
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 9/236 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ ++ +R +T L++LL RL A+RYA+LGG K+IR LV
Sbjct: 5 NFLAWMEAIQRRSETALENLLPD-----ANIAPARLHEAMRYAVLGGGKRIRPLLVHAAG 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L +V A+E IH YSL+HDDLP MDN +RRGKPTVH++YD+ TA++ G+
Sbjct: 60 GLVGAAPERLDKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLVGDS 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L AF+ +S + + ++ L G +GM GGQ +D + + ++ +
Sbjct: 120 LQALAFQSLSEHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAAVGKQLSREELEYM 179
Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + GA A + ERL +G+ +G++FQ+ DD+LD + D
Sbjct: 180 HIHKTGALIRASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTA 235
>gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
Length = 324
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ ILD + A+ + L I+Y L LGGK+IR L+ +L+ N L
Sbjct: 5 EEILDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQ 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MDN +RRG TVH +++ AI++G+ +L AFE I+S
Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIASGD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + ++ Q + M + E + + ++KT L+ A +
Sbjct: 123 PAQLKALLNLFTVTALEIGEGQQL---DMEFEHRNDVTEAEYIEMIRLKTSVLLACALKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAI+A AS+ + L FGE +G+ FQL DD LD D
Sbjct: 180 GAILAEASEEDARNLYIFGEKIGLAFQLQDDYLDVYGD 217
>gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 324
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 12/225 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + + T L I Y L LGGK+IR L +++N + A+
Sbjct: 3 AFENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAI 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +E H ++L+HDDL + + + +L+ +I++
Sbjct: 63 KPALGLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTA--------ILSGDAMLIAA 114
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
+ + + GGQ D++ E + + + ++KT L+
Sbjct: 115 YQLIGSTEHGHLKQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLA 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++GA++ ASQ + L FG N+G+ FQL DDLLD D
Sbjct: 175 CSLKTGALLGGASQEDASNLYAFGINIGLAFQLQDDLLDVYGDTA 219
>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
Length = 290
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 3 INSLKEEVDQSLKAYFNKDREY-----NKVLYDSMAYSINVGGKRIRPILMLLSYYIYKS 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 58 DYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 117
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 118 MKVLVDYSLEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 178 GELIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L + +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDGDALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
Length = 296
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 132/240 (55%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L + L + I+ L + + L ++ Y+L GGK++R +V
Sbjct: 1 MTNKLDAFLASRKQMIEQQLSLYTERLD------MPESLKKSMLYSLEAGGKRLRPLVVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++A
Sbjct: 55 AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I S ++ R +L+ L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKQVTLKE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F+ +GAI+A A ++E E+LR F ++GI FQ+ DD+LD E K
Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234
>gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 324
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ + L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHLSEIQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++
Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVIDLFSLTALEICEGQQL---DMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A AS + E L FG +G+ FQL DDLLD D KK
Sbjct: 181 AILAGASAADAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20]
gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20]
Length = 295
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-STEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 300
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L K ++ +D L + + + + ++YA+L GGK++R L+
Sbjct: 8 FKEYLGMGKKLVEDGIDKYLGEL------TYPEVIAEGMKYAVLNGGKRLRPILLFMTLD 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L +AIE IH YSL+HDDLP++DN RRGK T H ++ E I+ G+ L
Sbjct: 62 ILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LT+AF +++ + L +++ + G+ GM+GGQM+D + + ID + +
Sbjct: 122 LTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMH 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L+ E ++A AS ++E L + E +G+ FQ+ DD+LD E D
Sbjct: 182 AHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFE 235
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 12/236 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
LQ+ +RI+ L L L+ A+RY LLGGK+IR FLV
Sbjct: 15 FSQDLQQVQERINAFLAQQLN------LNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGR 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + A +E IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+AG+ L
Sbjct: 69 MLGADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDAL 128
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
+AFEI++ + L+ +L G +GM GQ LD+ E + ++ I
Sbjct: 129 QAFAFEILTQAPAL-SAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIH 187
Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A + G I + + ++L+ + +G+ FQ+ DD+LD E +
Sbjct: 188 RNKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESE 243
>gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittHH]
Length = 296
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 130/238 (54%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ S N LL A++YALL GGK++R FLV
Sbjct: 2 GNFSEELQQVQTRINRFLEAQFEGIESR-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG G++ GQM+D+ E ++ +V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L ++ RL A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPAESA-----VPTRLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D + Q+ +
Sbjct: 117 LQSQAFVALTDADALSPVQQAAL-VRELALASGSLGMAGGQAIDLASVGIKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
Length = 292
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 8/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M + RI++ LD L + RL A+RY++LGG K++R LV
Sbjct: 1 MTA--ETLFARWRDRIESELDAALPS-----PAEAPQRLHQAMRYSVLGGGKRMRPLLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF A+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 54 ASGHLFGAQLEHLDAAAMAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AF +++ + L+ +D + +
Sbjct: 114 GDALQARAFGLLADAPLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALTR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ A + + +L F + LG+ FQ+ DD+LD E
Sbjct: 174 MHALKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSE 229
>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 297
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ E
Sbjct: 2 NFKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+
Sbjct: 57 QMFGGKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDA 116
Query: 123 LLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
LL YA+E+ + + K + + L G+ GM+GGQ ++++ + Q+
Sbjct: 117 LLNYAYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQI 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D
Sbjct: 177 LFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEE 234
>gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 297
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++++ +I+ ILD+ L +T +L+A+ + GGK++R L+ E
Sbjct: 2 NFKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F AAIE IH YSLIHDDLP++DN RRG+ T HI Y E AI+AG+
Sbjct: 57 QMFGGKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDA 116
Query: 123 LLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
LL YA+E+ + + + + + L G+ GM+GGQ ++++ + Q+
Sbjct: 117 LLNYAYEVATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQI 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KT AL+ GA++A AS+ + ++ GE +G+ FQ+ DD+LD D
Sbjct: 177 LFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEE 234
>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 32/256 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN S +++ I LD A+ DRL A RY+LL GGK++R LV
Sbjct: 1 MNP-YSSYVEQFQTLIKEELDR-----AAQFTADCPDRLSEASRYSLLAGGKRLRPLLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L AIE +H YSLIHDDLP+MD+ +RRG+PT H Q+DE TAI+A
Sbjct: 55 LSAQACSGKPEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---- 175
G+GLLT AFE +++ + + +L L+ G++GM+GGQ D+ E E
Sbjct: 115 GDGLLTRAFETLAAGI--VDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESK 172
Query: 176 -------------------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
Q+ I + KTG L+ A GAI+ A + + + +G+
Sbjct: 173 SSEETAENPAEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDA 232
Query: 217 LGIIFQLADDLLDCEE 232
+G+ FQ+ DD+LDC
Sbjct: 233 IGLAFQVMDDILDCTS 248
>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 305
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
L + + I+ L L+ T R++ A+RYA L GGK++R FLV + A
Sbjct: 10 LNEVMAAEALAINDHLSQLMPATDGP-----EGRVVDAMRYAALEGGKRLRPFLVLQSAQ 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF+V+ AL V AAIE IHCYSLIHDDLP+MDN +RRG+PTVH QYDE TAI+AG+ L
Sbjct: 65 LFSVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGDAL 124
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQV 177
LT AFE+I+ P T +R L+ L G +GM+GGQM+D+ E D +
Sbjct: 125 LTKAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVPAI 184
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTG L+ F+ +GAI+ A +++++ L + +LG+ FQ+ADDLLD E D
Sbjct: 185 TRMHQLKTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTA 242
>gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
RdAW]
Length = 296
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-STEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG G++ GQM+D+ E ++ +V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 289
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 12/234 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+L++ ++ +D+ L L ++ Y+L GGK+IR L A
Sbjct: 2 FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 52
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ L
Sbjct: 53 AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
LTYAFE+I+ P + ++ + + + + G +GM+GGQMLD++ E ++ +
Sbjct: 113 LTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D
Sbjct: 173 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 226
>gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-03]
gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-07]
gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-22]
gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-26]
gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-32]
gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-12]
Length = 312
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 147/238 (61%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L + ++ I+ +D LL + T + RL+ A+RYA LGG K++R +L AS
Sbjct: 21 LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H Q+DE TAI+AG+ L
Sbjct: 76 LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILAGDAL 135
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E +V +
Sbjct: 136 QTKAFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEVRHLH 195
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ ++ ESGAI+ AS + + RLR +G N+G FQ+ADD+LD +L K
Sbjct: 196 ALKTGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKR---IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
MN L +E +R +D L LL + A+ YA+ GGK++R
Sbjct: 1 MNFDLEHFQEEIRQRKEFVDNCLIGCLLS-----PDSDPPLIHQAMHYAIFNGGKRLRPI 55
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+V E A + A+ V A+E IH YSL+HDDLP MD+ RRG+PT H + E A
Sbjct: 56 MVLEGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANA 115
Query: 117 IIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI 172
++ G+ LLT AFE++S + +K + +++ + G +GM+GGQ+LD + + I
Sbjct: 116 VLTGDALLTAAFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKII 175
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
D + + +KTG L A +GAI+ + L + +N G+ FQ++DD+LD +
Sbjct: 176 DYESLRKLHCLKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQG 235
Query: 233 DLP 235
D
Sbjct: 236 DAA 238
>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 289
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 12/235 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ K I+ L++ + S N + + Y+L +GGK+IR L++ ++
Sbjct: 2 EINNLKKDINEYLENYFSEKGSF-----NRIIYDSCSYSLNIGGKRIRPILLSLTYYIYK 56
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ + + AA+E IH YSLIHDDLP MDN +RRGKPT HI++ E A++AG+ L
Sbjct: 57 EDYRKVIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDAL-LN 115
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
II +N + + G +GM+GGQ + + + I + ++ + K
Sbjct: 116 EAMIIMMDYALKSENNALRAAHEIAVAAGAEGMIGGQVVDIISEGKKISQDELEYMHAKK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
TGAL+ A SGAI+A A +++ LR +GE LG++FQ+ DD+LD D L K
Sbjct: 176 TGALIRAAIVSGAILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNVLGK 230
>gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21]
gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21]
Length = 324
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
+ TI+ + L + + + L I+Y L GGK++R L A LF
Sbjct: 4 IAALQTIIGEALTERN---FPDNPNTLYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKE 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L AIE H ++L+HDD+ MD +RRG+ T+H ++D TAI++G+ L A++++
Sbjct: 61 GLPAALAIEMFHNFTLMHDDI--MDEAPLRRGRETIHKKWDINTAILSGDATLIRAYQLL 118
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ K +L + Q + + + ++KT L+
Sbjct: 119 AECKPELLAELLKVFNKMAQEVCEGQQLDMDFEKLATVTE---EEYLHMIRLKTSVLLGA 175
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GAI+ A + ++ L FG N+GI FQL DD+LD D K
Sbjct: 176 ALEIGAILGGADKQDRSNLYTFGVNIGIAFQLQDDILDVYGDPSK 220
>gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
Length = 324
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + + T+ + L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++
Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVIDLFSLTALEICEGQQL---DMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A AS + E L FG +G+ FQL DDLLD D KK
Sbjct: 181 AILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L K+
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKE 232
>gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
Length = 297
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+P+ + + + + +++ L + L ++RYA+L GGK+IR LV
Sbjct: 2 TVPASFDDWMRNVQSTMEESLSSLLPE-GKLASSSLHESMRYAVLDGGKRIRPLLVFATG 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ L R AA+E IH YSL+HDD+P MDN +RRGKPTVH+++ E TA++AG+
Sbjct: 61 YLFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGEATALLAGDA 120
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF ++S+ + + +LS L + + ++ + +
Sbjct: 121 LQAQAFVVLSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQAIDLASVGKSLTVNELENMHR 180
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ + GA + ++ EK L + + +G+ FQ+ DD+LD D
Sbjct: 181 LKTGALLTASVFLGAYCSKIPTEQEKNALNAYAKAIGLAFQVVDDILDVTADSA 234
>gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
Length = 324
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 13/227 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D ILD + + + L IRY L LGGK+IR L+ +LF + T L
Sbjct: 5 DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL + V + L + +++ +
Sbjct: 65 ACALETYHNYTLLHDDLMDDAPLRRGQQTVHVRWDANTAI-------LSGDSMLVLAFER 117
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
Q D+ + +L L L+ G Q + D T+ + ++KT L+ A
Sbjct: 118 MQQCDDRHLRDVLRLFTVTALEIGEGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLACAM 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ GAI+A A + + L FGE +G+ FQL DD LD D KK
Sbjct: 178 KIGAILADAPSEDMDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 12/234 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+L++ ++ +D+ L L ++ Y+L GGK+IR L A
Sbjct: 3 FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L A+E IH YSLIHDDLP+MDN RRG+ H + E AI+AG+ L
Sbjct: 54 AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
LTYAFE+++ P + + + + + + G +GM+GGQMLD++ E ++ +
Sbjct: 114 LTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGA++ A GAI+A ++ + E L + + +G+ FQ+ DD+LD E D
Sbjct: 174 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 227
>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
Length = 297
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
L +R++ ++ L Q + L SA+ Y+ GG K++R L A
Sbjct: 2 DFKQALAHYQERVNATIERYLPD-----PQQAPEALHSAMHYSATGGGKRVRPLLCYATA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AA+E IH YSL+HDDLP+MD+ +RRG+ T HI +DE TAI+AG+
Sbjct: 57 EALGQSAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDA 116
Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF+I++S + R + + L G+ GM+GGQ + + + + Q+
Sbjct: 117 LQTLAFDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKR 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+ +KTGAL+ + + A +A ++ + +RL + E +G+ FQ+ DD+LD D L
Sbjct: 177 MHALKTGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISDTQTL 236
Query: 235 PK 236
K
Sbjct: 237 GK 238
>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
Length = 293
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ + ++ L D + + +N R+ A++Y+L GGK+IR L
Sbjct: 2 EIKGVIETLREELNKYLYDYM-----EGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L+ + + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E A++AG+G
Sbjct: 57 KLYKTDCNEVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
LL A ++ K + + ++ + G GM+GGQ +D ++ I Q++ +
Sbjct: 117 LLNEAMSLM-FRHCIGKKDNAIRACSIISESAGADGMVGGQTVDILSENTKIPIDQLYYM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + S A+ A AS+ E ++L +GE LG+ FQ+ DD+LD D
Sbjct: 176 HSKKTGALIKGSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGDTA 230
>gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
synthase) [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
synthase) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 305
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ +L+ +R++ +L L A N+ L+ A+++ LLGGK++R FLV
Sbjct: 6 STQFKEQLKICQQRVNNVLISTLSSVA-----FANNPLVHAMQHGTLLGGKRLRPFLVYA 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F ++ AA+ECIH +SLIHDDLP+MDN +RRG+PT HI++ E AI+AG
Sbjct: 61 VGEMFGLSANNLDAPAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAG 120
Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L AFEI+S + R +++ L G+ GM GGQ L + ID +
Sbjct: 121 DALQALAFEILSKREMPDVTTADRLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHML 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL-- 234
I + KTGAL+ A GA A S ++ L + + +G+ FQ+ DD+LD D
Sbjct: 181 EQIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILDVIGDTEM 240
Query: 235 -PKK 237
K+
Sbjct: 241 IGKR 244
>gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1]
gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1]
Length = 298
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E
Sbjct: 2 ELKEQLLQYTRETEEIVFSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+
Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
LL YA E S D + + + + L+ G+ GM+GGQ +D+ ++ + +
Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD +
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEE 235
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L E I+ L + D L ++ Y+L GGK++R +V
Sbjct: 1 MANKFEQFLAERKNVIEQQLSVYTERLN------MPDSLKKSMLYSLEAGGKRLRPVVVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + VG A+E IH YSLIHDDLP MD+ +RRGKPT H + E TA++A
Sbjct: 55 AILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114
Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT +F++I S + + R +L+ L G +GM+GGQ ++ + + + +
Sbjct: 115 GDGLLTESFKLITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEE 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I + KT L+ F+ +GAI+A A +NE E LR F ++GI FQ+ DD+LD E + K
Sbjct: 175 LESIHERKTAKLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEK 234
>gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SM4/1]
Length = 298
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E
Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+
Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
LL YA E S D + + + + L+ G+ GM+GGQ +D+ ++ + +
Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD +
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEE 235
>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
G+ LLTYAF ++S + + + ++S T + G + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 295
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELG-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ + R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 239
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 11/223 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + L + + ++ LD + + + +++ ++RY+L GGK++R L
Sbjct: 24 FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MDN RRGK T H Y + AI+AG+
Sbjct: 77 CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
GLL+YAFE +++ + Q++ L +G G++GGQ++DI E + +
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
I KTGAL+ GAI+A A++ + ERL + +N+G+ F
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAF 239
>gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342]
gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22]
gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342]
gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22]
gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
Length = 299
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +LQ ++ + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFPQQLQACVEQANGALRRFIA-----PQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 AMFGVSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P + D R ++ L G+ GM GGQ L+ + + +D +
Sbjct: 117 LQTLAFSILSDAPMADVSDRDRLAMVSELAQASGVAGMCGGQALDLEAEGQQVDLQALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + EN+G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 9/240 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L + L T S L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
G+ L ++AFE++++ +Q+ T + + L +++ + ++
Sbjct: 116 GDALQSFAFELLATDPHLTDREKVAQVTELATASGAKGMCLGQSLDLIAENKAVSLEELE 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD D K
Sbjct: 176 LIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTDK 235
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 12/229 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L+D S+ N L +++Y++ +GGK+IR L+ S++ N+ +
Sbjct: 7 EINKWLNDYFENKGSY-----NKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIM 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ AIE IH YSLIHDDLP MDN +RRGKPT H + E AI+AG+GLL A I+
Sbjct: 62 PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIM-F 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + ++ G +GM+GGQ + + + I ++ + K KTG L+
Sbjct: 121 NYSLTHDKLALMASKVISEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKS 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ +GAI+ AS+ E E L FG LG+ FQ+ DD+LD D L K+
Sbjct: 181 SIIAGAILGGASKEEIEILDEFGSKLGLAFQIKDDILDVIGDSKILGKE 229
>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 15/242 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
S L E + I+ L L Q + L +++Y+L GGK++R LV
Sbjct: 6 TFESYLVEKTAYIEQRLLPALEQQ------GVPENLYESMKYSLMAGGKRLRPMLVLAVL 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+
Sbjct: 60 EALDKPIERGVAFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDA 119
Query: 123 LLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQV 177
LLT AF I+ +T + L+ L G GM+GGQM ++ + + ++ Q+
Sbjct: 120 LLTRAFAYIAEAYMDRTDVSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQL 179
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
I + KTG L+ A G +A AS+ + E L +G +G+ FQ+ DD+L+ E D L
Sbjct: 180 EFIHRHKTGDLLIAALRGGGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGDAQEL 239
Query: 235 PK 236
K
Sbjct: 240 GK 241
>gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
(Farnesyltranstransferase) [Candidatus Cloacamonas
acidaminovorans]
gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
(Farnesyltranstransferase) [Candidatus Cloacamonas
acidaminovorans]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 123/236 (52%), Gaps = 9/236 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L ++E + ++ ILD L + + ++ L A+RY++ GGK++R +L
Sbjct: 7 LKKDMKEKQELVNIILDRFLPR-----KDEYPKDLHKAMRYSVFAGGKRLRPYLTMTAFE 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+FN N V A IE IH YSLIHDDLP +DN RRGK + H + E A++AG+ L
Sbjct: 62 MFNSNIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDAL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AFE+I+ + K ++ L+ I ++ + + +D+ + I +
Sbjct: 122 LLSAFELITLAELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIHEN 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ + GA+ A + E + L +G+ +G++FQ+ DDLLD E +L K
Sbjct: 182 KTARLINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIEGTQEELGK 237
>gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides
vulgatus ATCC 8482]
gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides
vulgatus ATCC 8482]
Length = 325
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L
Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ A +++
Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGD-----AMLVLAYRL 118
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFAC 193
+ ++ + L+ G Q + D + + ++KT L+ A
Sbjct: 119 MNNCPERYLRQVMDIFSQTALEICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAAL 178
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++ AS+++ +L FG +G+ FQL DD LD D
Sbjct: 179 KIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220
>gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638]
gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638]
Length = 299
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 134/242 (55%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
++LQ +R + L + Q N L++A+ Y ALLGGK++R FLV
Sbjct: 2 DFSTELQACVERANDALRRFI-----EPQPFQNTPLVAAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 NMFGISSNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L G+ GM GGQ L+ + ++ Q+
Sbjct: 117 LQTLAFSILSDAPMIEVADRDRLAMVSELAMASGVAGMCGGQALDLEAEGHQVNLEQLER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGSKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 11/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ ++L++ RI+ L + + S+ N L A++Y LLGGK++R FLV
Sbjct: 1 MSYQFGTELKQVQDRINQFLANQFEEIDSY-----NAPLRDAMKYGLLLGGKRVRPFLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIE IH YSLIHDDLP+MDN +RRG+PT HI +DE TAI+A
Sbjct: 56 ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L +AFEI++ + + QL+ L G+QGM GQ L + + ++ ++
Sbjct: 116 GDALQAFAFEILTEAPSL-SAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KTGAL+ A + G I + ++ +++L + + +G+ FQ+ DD+LD E +
Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEGNSA 234
>gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKEYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ +Q+ K
Sbjct: 118 AMNIM-FEYSLKNGEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 AGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040]
gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040]
Length = 336
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 14/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + ++ ++ + + + + L+ A GGK++R L A +
Sbjct: 17 LAETLAPELEAVNLLIRERMASQHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARM 70
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 71 CGYEGEHHLKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 128
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ D E + + K
Sbjct: 129 ARSFQLMVDTGSLRVLDILANASATIAEGEVLQM------TAATDLGTTEEIYLQVVRGK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T AL A E G ++A AS+ + + L +G+ LGI FQ+ADDLLD + D K
Sbjct: 183 TAALFSAATEVGGVIAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAK 234
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + K ID+ ++++ ++ ++ D L + GGK++R L
Sbjct: 2 NLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPLD---AGGKRLRPILTCLACE 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LFN ++ A+ ++E IH YSL+HDDLP+MDN +RRGKPT H++Y E AI+ G+GL
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
LT++FEI+S+ K + +S + M L ++ ID + ++
Sbjct: 119 LTHSFEILSNANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILHSK 178
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGA++ A GAI + E + +GE +G+ FQ+ DD+LD D L K
Sbjct: 179 KTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGK 234
>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NALLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++++ L+ + L A+RY +L GGK++R LV
Sbjct: 4 DEFDTWSRDRLEQVEAALER-------WVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSA 56
Query: 62 ASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + ALR ++E IH YSLIHDD+P MD+ +RRGKPTVH+++ + A++AG
Sbjct: 57 AEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+ + AFE+++ + ++++L L G GM GGQ +D+ +
Sbjct: 117 DAMQALAFEVLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLS 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
+ + KTGAL+ + GA AS ++ L +G LG+ FQ+ DD+LD L
Sbjct: 177 DMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S ++ R++ L+ L + + +RL A+RY+++ GGK++R L
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDN----IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ AF + +P +D + + G G L +D+ +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLKLDQAALEY 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ + KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L
Sbjct: 177 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
Pei191]
Length = 334
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 45/275 (16%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L+ + ++ L +L+ A+ + + ++ Y+L GGK++R LV
Sbjct: 1 MN-EFEKYLKTKAAFVEKGLSKYILKIAN-----SPEVIKDSMAYSLEAGGKRVRPVLVM 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A F + A+E +H YSLIHDDLPSMDN +RRGKPT H Y E A++A
Sbjct: 55 AAAEAFGKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLA 114
Query: 120 GNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LLTYAFE+ + + + + +G +GM+GGQ+ DI E + E +
Sbjct: 115 GDALLTYAFEVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKF 174
Query: 178 F------------------------------------MIQKMKTGALMCFACESGAIMAH 201
I KTGAL+ + E+GA++A
Sbjct: 175 KRITAVKKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAG 234
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AS+ ++ +R +G +G+ FQ+ DD+LD K
Sbjct: 235 ASEADRANMRKYGNAMGLAFQIVDDILDVTVSEKK 269
>gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Gardel]
gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Gardel]
Length = 276
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 130/237 (54%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + ++ S+ L ++L + H+D LL++++Y+L GK IR FLV
Sbjct: 1 MSYNISYLMENYSRLFTKELYNILPK------ADHDDILLASMKYSLFTPGKYIRPFLVN 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +FNVN L V AIE IH YSLIHDDLP MDN RRG+ + H ++ E AI+
Sbjct: 55 ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT AFE++S+ R +L+ IG QGM+ GQ+LD + D +
Sbjct: 115 GDALLTLAFEVLSTINESPYIRCRIIQVLTQ--AIGYQGMIKGQVLDTETIAKDINDIKT 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KT L ACE G I+ AS E L+ +G NLG FQ+ DD+ D +D+ K
Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229
>gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittEE]
gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
7P49H1]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GNFSEELQQVQIRINRFLEAQFDGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 11/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+QE R + L + L A+RYA+L GGK++R LV A
Sbjct: 21 DFSVWMQERLARTEDALSR-------WVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 73
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+
Sbjct: 74 EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 133
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
L AFE++ + +++++L L G QGM GGQ +D+ ++ +
Sbjct: 134 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREM 193
Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D
Sbjct: 194 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 249
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 129/236 (54%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++E+ ++ L Q Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFVKESKTFVEEQLARYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLT+AF+++ + + + +L L L G +GM+ GQ ++ + + ++ +++
Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTG L+ +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
Length = 327
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 13/237 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L E +++ +D + L A RY L GGK++R +V +
Sbjct: 2 ELEKYLGEVITQVNETIDKYIQ--------GDVPELYEASRYLLKAGGKRLRPLMVVLSS 53
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A+ GAAIE +H ++LIHDD+ D V
Sbjct: 54 ELLGGSRDRAILAGAAIEVLHNFTLIHDDIMDQDTTRRGLPTVHVKWGIPTAILAGDLLH 113
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ S + R+ S + I +G + + + + + +
Sbjct: 114 AKAFELITESIKGLPIDLAYRALNCFSRSIVIVSEGQAMDMEFERRWDVTENL-YLEMIR 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + G ++A+ + E L FGE +GI FQ+ DD+L D L K
Sbjct: 173 KKTAQLFACSAHLGGLLANGTNEEVNSLYDFGEKIGIAFQIMDDILGITADEKELGK 229
>gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
NT127]
Length = 296
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GNFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
Length = 333
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 1 MNGG-------LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI 53
MN L ++L + R++ ++ + + + + L+ A GGK++
Sbjct: 3 MNENVSKPLDRLSAELAGDMDRVNALIRERMASRHAPRIPEVTAHLVEA------GGKRL 56
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R LV A L + + + AA+E IH +L+HDD+ +D RRG+PT ++ +D
Sbjct: 57 RPMLVLAAARLCGYAGESHILLAAAVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDN 114
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
++++ G+ L +F++++ ++ I + ++ LQ QD
Sbjct: 115 KSSVLVGDYLFARSFQLMADTESMQVMRILANASATIAEGEVLQL------TAAQDVSTT 168
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
E I + KT AL A E+GA++A A + L +G+ LGI FQ+ DDLLD
Sbjct: 169 EDTYIQIVRGKTAALFSAATEAGAVVAGADPAVQRALFDYGDALGIAFQIVDDLLDYGGS 228
Query: 231 EEDLPK 236
+ K
Sbjct: 229 TSSIGK 234
>gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf.
saccharolyticum K10]
Length = 298
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L +L + ++ + I+ L Q H +T + A+ Y++ GGK++R L+ E
Sbjct: 2 ELKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+
Sbjct: 57 RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
LL YA E S D + + + + L+ G+ GM+GGQ +D+ ++ + +
Sbjct: 117 LLIYAVETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I ++KTGAL+ + GA++A AS+ E + + N+G+ FQ+ DD+LD +
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTGNEE 235
>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
Length = 299
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MDN +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264]
gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH]
gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4]
gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264]
gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264]
Length = 294
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFDQWMRSVLERVETALGHYLPA-----ETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L + AF ++ L + ++ L+ L G GM GGQ +D+ + T+ +
Sbjct: 117 LQSQAFVALT-DAAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPSDDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 291
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
+ + L+ + ++ +L L T + RL A+ Y+L+ GK++R LV A
Sbjct: 1 MQTYLEACKEAVNALLARLFE------PTGLHARLKEAMNYSLMADGKRLRPALVIATAE 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F V L AA+E IHCYSLIHDDLP MD+ +RRG+PT H+ + E A++AG+ L
Sbjct: 55 TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LT AF +++ P + + ++ +L G+ GM+GGQ ++ V I
Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ E G A + L C+GE LG+ FQ+ DD+LD
Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTE 228
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 134/236 (56%), Gaps = 12/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++++ + I+ L + L + ++ + A+ Y+L GGK+IR L SL+
Sbjct: 3 RIKKMGEEIELWLKEYLDN-----KGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A I+ + + ++ G+ GM+GGQ++D +D+ I +++ + K K
Sbjct: 118 AMNIM-FEYSLKNGEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TGAL+ + +GAI+ + + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
Length = 302
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+GG + +E + L + + L A Y+L GGK+IR L E
Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFE 69
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A+ A+E IH +SLIHDDLP MDN +RRG+P+ H + E A++AG
Sbjct: 70 MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDDMRRGRPSCHKAHGEAVALLAG 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L YA + I + L GM+ GQ +D +F + +
Sbjct: 130 DALSAYAGKYICDSDLSAEKKTAMIKEL----YDRTLGMIEGQTIDTDGKFDTLDGLLSM 185
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD +L K
Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244
>gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001]
gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001]
Length = 312
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 147/238 (61%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L + ++ I+ +D LL + T + RL+ A+RYA LGG K++R +L AS
Sbjct: 21 LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF V + RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 76 LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDAL 135
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
T AFEI+++ +T N+R L+ + G GM+GGQM+D++ E +V +
Sbjct: 136 QTKAFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLH 195
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ ++ ESGAI+ AS N + RLR +G N+G FQ+ADD+LD +L K
Sbjct: 196 ALKTGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253
>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
Length = 307
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+LQ+ + I+ +L+ L ++ + A+ Y++ GGK++R L+ E
Sbjct: 10 SQFMEELQQKVEHINNVLEKFLP-----VEEGQQRIIFEAMNYSVRAGGKRLRPILMEET 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+
Sbjct: 65 YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------LDIQDEFIDET 175
LL A+E + + R ++ + G D I
Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ I ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD L
Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLE 244
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 9/235 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ ++E D L L ++ N ++ A+RY++ GGK++R + +L
Sbjct: 4 KAIMKEYQILTDKKLHHYLD-----VKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNL 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL- 123
F N L A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ L
Sbjct: 59 FKDNLEEVLPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ 181
+IS +TQ N+ Q + + G+ GM+GGQ++D++ E + I
Sbjct: 119 NYAFEIMISHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIH 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT AL+ A + GAI+A A++ + + G+N+G+ FQ+ DD+LD D K
Sbjct: 179 YNKTAALIISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKK 233
>gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
Length = 325
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L
Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++
Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + S T +G + +++ + + ++KT L+ A +
Sbjct: 124 ERYLKQ--VMDIFSQTALEICEGQQWDMEFETRNDVTV-PEYMEMIRLKTSVLLSAALKI 180
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++ AS+++ +L FG +G+ FQL DD LD D
Sbjct: 181 GAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220
>gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
Length = 333
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L+ + ++T++ + + + + L+ A GGK++R L A L
Sbjct: 14 MAAYLESDMAAVNTLIRERMASKHAPRIPEVTAHLVDA------GGKRLRPMLTLATAHL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ Q+ E + + K
Sbjct: 126 SRSFQLMVETGSLRVLDILANASATIAEGEVLQL------TASQNLATTEEIYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A A ++ L +G+ LG+ FQ+ DDLLD + D
Sbjct: 180 TAALFSAATEVGGVIAGAPDDQVAALFEYGDALGVAFQIVDDLLDFQGDAG 230
>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
Length = 293
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 13/239 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L L+ + + +D + LL + + + T L A+RY+L GGK+IR L+
Sbjct: 4 LEQFLKTSKQLVD---EQLLAEVDARVIT---PTLKKAMRYSLEAGGKRIRPILLFATLI 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ AA+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+GL
Sbjct: 58 SLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQ 181
LT AF ++S + R +L+ + G +GM+ GQ ++ +D + ++ I
Sbjct: 118 LTLAFSLLSEEEAL-PAESRVKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ KTGAL+ A +GAI+A+A E+L + +N+G+ FQ+ADD+LD D L KK
Sbjct: 177 RKKTGALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQKLGKK 235
>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
Length = 308
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 11/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + L +RI+ L + L Q L A+ YA LLGGK+IR FL+
Sbjct: 12 MTYSLTTDLNAIQQRINHFLSNQLPQ-----SPTEQPPLNQAMAYAVLLGGKRIRPFLMY 66
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V T AAIE IH YSL+HDDLP+MDN +RRGKPT HI +DE TAI+A
Sbjct: 67 TTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILA 126
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
GN L AFE+I++ + Q + +L+ G +GM GQ LD +++ ++ T++
Sbjct: 127 GNALQALAFELIANAPHLTDWQ-KVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTEL 185
Query: 178 FMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ + ++ + K+ L + + +G+ FQ+ DD+LD
Sbjct: 186 EQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTD 245
Query: 236 K 236
K
Sbjct: 246 K 246
>gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 10/222 (4%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
L T + + + A+RY+LL GGK++R L L + TA+ A+E IH
Sbjct: 3 LSTFRSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIH 62
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNI 142
SLIHDDLP MDN +RRGKPT H + E A++AG+ LL AFE ++ + +
Sbjct: 63 TSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASER 122
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGA 197
+ ++ L IG +G++ GQ++D+ E ++ V I KT AL+ A GA
Sbjct: 123 MIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGA 182
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
IM ++ E E+LR + +G++FQ+ DD+LD E+L K
Sbjct: 183 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 224
>gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
Length = 300
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 100/242 (41%), Positives = 140/242 (57%), Gaps = 12/242 (4%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
M G L + L+E + I+ LD LL Q +L +A+RY++LGG K++R FL
Sbjct: 1 MTGDTPLSAALREAAAEIEHTLDMLLPQEEGP-----EAKLYAAMRYSVLGGGKRMRGFL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V E A+ F V+ ++ALRV AAIE +H YSL+HDDLP+MDN +RRGKPT H Y E TAI
Sbjct: 56 VLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L +AF +++ T +R++L L L G +GM GGQMLD+ E E
Sbjct: 116 LAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALS 175
Query: 178 FMIQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KTG L+ F+ E+GA++ A ++ L +G LG FQ+ADD+LD
Sbjct: 176 ESAIGRLQLLKTGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDATAS 235
Query: 234 LP 235
Sbjct: 236 AE 237
>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
Length = 296
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMI 180
L ++AFEI++ + + + + + L + + I +++ +I
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELI 176
Query: 181 QKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
Length = 300
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
MN +++ I+ IL + L + + ++ A+ Y+L GGK++R L
Sbjct: 1 MNSKEEFTVQMKRKVAEIEEILKEYLPK-----PEGYQKVIMEAMEYSLMAGGKRLRPML 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ E + LF AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I
Sbjct: 56 MRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGI 115
Query: 118 IAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+AG+ LL YAFE + + + + L G+ GM+GGQ++D+++
Sbjct: 116 LAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVP 175
Query: 176 QV--FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ I ++KTGAL+ A GAI+ A + + ++ +GI FQ+ DD+LD
Sbjct: 176 KDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDVTST 235
Query: 234 LP 235
Sbjct: 236 EE 237
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 138/239 (57%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + L + +R++ L L+L+ + + ++RY+L GGK+IR L A
Sbjct: 2 EIATYLNDQRQRVEDQLAALMLK-----PAGDFSQHIESMRYSLFVGGKRIRPILCLAGA 56
Query: 63 SLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ T R V A+ECIH YSLIHDDLP+MD+ +RRGKPT H + E AI+A
Sbjct: 57 EAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILA 116
Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+GLLT+AF+++SS + ++ R +++ ++ G GM+GGQ + + + +
Sbjct: 117 GDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEM 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ + SGA++A AS ++ L+ +G+N+G+ FQ+ DDLLD E
Sbjct: 177 LRTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVEATTE 235
>gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
Length = 299
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 133/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
++LQ R + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFATELQARVVRANDALRRFIA-----PQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 NMFGISDATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L G+ GM GGQ L+ + ++ Q+
Sbjct: 117 LQTLAFSILSDAPMVEVSDRYRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
Length = 294
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T +L A+RYA++GG K++R L
Sbjct: 2 TFEQWMRAVLARVEDALGHYLPA-----ETVVPGKLHEAMRYAVMGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVHIQYDE TA++ G+
Sbjct: 57 ELTGATEAARNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDAAALTAVQQAAL-VRELALASGSVGMAGGQAIDLASVGLMLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ S + L + + +G+ FQ+ DD+LD D
Sbjct: 176 HRKKTGALLRAAVRMGALAGETPSDDTMRALDVYADAIGLAFQVVDDILDVTTDSA 231
>gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661]
gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661]
Length = 299
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
L + R++ L + N L++A+ Y ALLGGK++R FLV
Sbjct: 2 DFSDLLTAHHTRVNQALQRFIAPL-----PFQNSPLVNAMEYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E TAI+AG+
Sbjct: 57 EMLGADDAALDAPAAAVECIHAYSLIHDDLPAMDDDSLRRGQPTCHIKFGEDTAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GGQ L + + +D +
Sbjct: 117 LQTLAFSILADTPMPGVSAEYRVAMLSELAQASGVAGMCGGQALDLAAEGQQVDLAALEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRSAVRLGALAAGERGRAALPALDRYANAIGLAFQVQDDILDVVGDTAIIG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
17629]
gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
Length = 307
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 12/240 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+LQ+ + I+ +L+ L + + A+ Y++ GGK++R L+ E
Sbjct: 10 SQFMEELQQKVEHINDVLEKFLPAEEGQQRI-----IFEAMNYSVRAGGKRLRPILMEET 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F + AAIE IH YSL+HDDLP+MDN RRGK T H Y E I+AG+
Sbjct: 65 YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------LDIQDEFIDET 175
LL A+E + + R ++ + G D I
Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ I ++KTGAL+ + GAI+A AS +E R+ LG+ FQ+ DD+LD L
Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLE 244
>gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2]
gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 128/242 (52%), Gaps = 12/242 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + Q ++ L L +T +D+L +++ Y+L GGK++R L+
Sbjct: 1 MGAEMKELWQSRRTLVERALQAELDRTD-----ILDDKLRASMAYSLMAGGKRLRPILLM 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + A+E IH YSLIHDDLP+MDN RRGK T H YDE TAI+A
Sbjct: 56 AAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ LLT AF +I + +++ ++ + G +GM+GGQMLD ++ I ++
Sbjct: 116 GDALLTLAFTVILRQQDV-PAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
+ KTGAL A SGAI+A AS+ + L + ++ G+ FQ+ DD+LD D+
Sbjct: 175 QRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVGTAEDI 234
Query: 235 PK 236
K
Sbjct: 235 GK 236
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L T L A+RYA++GG K++R L
Sbjct: 2 TFQQWMRAVLARVEDALGHYLPA-----DTVVPGTLHEAMRYAVMGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AF ++ L ++ L+ L G GM GGQ +D + + Q+ +
Sbjct: 117 LQSQAFVALT-DAAALSPQQQAALVRELALASGSIGMAGGQAIDLASVGQMLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ + + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPTADTMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
Length = 298
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L+ L + Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+
Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAEHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q+ + +KTGAL+ A GA+ ++ L + LG+ FQ+ DD+LDCE D
Sbjct: 175 QLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + + T L I Y L LGGK+IR L +++N + A+
Sbjct: 3 AFENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAI 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +E H ++L+HDDL MD RR KPTVH ++ TAI++G+ +L A+++I S
Sbjct: 63 KPALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGS 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + + G Q M ++E + + ++KT L+ +
Sbjct: 121 TEHGHLKQVLDLFTQTAAEICGGQQ---FDMEFESRMDVNEEEYIEMIRLKTAVLLACSL 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++GA++ ASQ + L FG N+G+ FQL DDLLD D
Sbjct: 178 KTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219
>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
Length = 314
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ ++++ ++I+ IL + L + ++ A+ Y+LL GGK++R L+ E
Sbjct: 21 MQAQMKHKVEKIEGILTEYLPRQEGF-----QSIIMEAMNYSLLAGGKRLRPMLMNETYR 75
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ L
Sbjct: 76 LFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDAL 135
Query: 124 LTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L YAFE + + + + + L G+ GM+GGQ++D+++ +
Sbjct: 136 LNYAFETAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDT 195
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I ++KT AL+ + GAI+ AS+ E + + +GI FQ+ DD+LD
Sbjct: 196 IYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTS 248
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
Length = 294
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L T RL A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----DTVVPARLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D + Q+ +
Sbjct: 117 LQSQAFVALTDAAALSPVQQAAL-VRELALASGSLGMAGGQAIDLASVGIKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
Length = 298
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L+ L + Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+
Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q+ + +KTG L+ A GA+ N+ L + LG+ FQ+ DD+LDCE D
Sbjct: 175 QLEQMHSLKTGTLIRAAVVLGALACPDLDSNDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13]
Length = 297
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 8/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +++ + + I+ L + +T ++L A+RY+L GGK+IR LV
Sbjct: 1 MNETNLRQMESDIEWIERELQHC---CRTKPETNPQAKVLEAMRYSLEAGGKRIRPLLVL 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AL+ AIE IH YSLIHDDLP+MD+ RRG+ + H +DE TAI+A
Sbjct: 58 AFCRACGGDVQKALKPALAIEMIHTYSLIHDDLPAMDDDDYRRGRLSCHKAFDEATAILA 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L FE++S+ T R L+ L + G +GM+GGQ++DI +E +
Sbjct: 118 GDALNVLPFELLSTDTTL-PAETRVSLIAELANAAGAEGMIGGQVIDIANETRTDVDQNN 176
Query: 180 IQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ M AC G ++A A+ + + LG+ FQ+ DD+LD
Sbjct: 177 LVNMYAHKTGALIRVACTMGCMVAGANDKMLTAATEYAQRLGLAFQIVDDILDVTG 232
>gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAA 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG G++ GQM+D+ E ++ +V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+QE R + L + L A+RYA+L GGK++R LV A
Sbjct: 32 DFSVWMQERLVRTEEALSR-------WVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 84
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+
Sbjct: 85 EAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
L AFE++ + +++++L L G GM GGQ +D+ ++ +
Sbjct: 145 LQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREM 204
Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D
Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260
>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
Length = 294
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
++ +R++T L L +T +L A+RYA L GGK++R L
Sbjct: 2 TFDQWMRSVLERVETALGHYLPA-----ETVAPAQLHEAMRYAALGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L + AF ++ D + + L G GM GGQ +D+ ++ +
Sbjct: 117 LQSQAFVALTDAAALPLDRQPAL-VRELALASGSIGMAGGQAIDLASVGHALSRDALETM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 296
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 133/241 (55%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + +R+++ LD L M T L A+RY++ GGK++R LV
Sbjct: 2 SLELLMTTYRQRVESALDTWLP-----MTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ NVN ++ +A+E IH YSL+HDDLP+MD+ +RRGKPT H +DE TAI+AG+
Sbjct: 57 AALNVNPISLDAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDA 116
Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF ++S Q D R +++ +L G +GM GGQ ++ ++ ++
Sbjct: 117 LQTLAFYVLSHDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELEN 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGAL+ + + GA+ + + N+ E+L + + +G+ FQ+ DD+LD E L
Sbjct: 177 MHIHKTGALIRASVKMGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVESSTTVLG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
Length = 299
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 1 MNG----GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRS 55
MN L ++ + + + LD+LL + RL A+RYA LG GK++R
Sbjct: 1 MNDLAPKDLARRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRP 55
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
F E +F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVH QYDE T
Sbjct: 56 FFALETGKMFDLAERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEAT 115
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ L T AFEI++ P T +IRS+L+ L G +GM+GGQM+DI D
Sbjct: 116 AILAGDALQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGARGMVGGQMIDILGVRDDLG 175
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V +Q++KTGAL+ FA E I+A A ++E+ L F ++LG+ +Q+ DD+LD E D
Sbjct: 176 AVARMQRLKTGALIAFAFEIPLIIARAKESERHALMAFAQDLGLAYQIVDDILDAEGDEK 235
>gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + + T+ + L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++
Sbjct: 66 TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVIDLFSLTALEICEGQQL---DMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A AS + E L FG +G+ FQL DDLLD D K+
Sbjct: 181 AILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKR 224
>gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides
distasonis ATCC 8503]
gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp.
2_1_7]
gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides
distasonis ATCC 8503]
gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 12/225 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + + T L I Y L LGGK+IR L +++N + A+
Sbjct: 3 AFENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAI 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +E H ++L+HDDL + + + +L+ +I++
Sbjct: 63 KPALGLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTA--------ILSGDAMLIAA 114
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
+ + + GGQ D++ E + + + ++KT L+
Sbjct: 115 YQLIGSTEHGHLKQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLA 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++GA++ ASQ + L FG N+G+ FQL DDLLD D
Sbjct: 175 CSLKTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219
>gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
Length = 298
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 130/236 (55%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ L +++ ++ L L +RLL+++ Y+LL GGK++R L +
Sbjct: 4 SAIKEDLLASARHVEGFLRTSLH------GRGVPERLLTSMEYSLLAGGKRLRPVLCLKW 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L ++ A+ A++E IH YSLIHDDLP+MDN +RRGKP+ H Q+DE TAI+AG+
Sbjct: 58 AKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAMDNDDLRRGKPSNHKQFDEATAILAGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVF 178
GLLT AF +++ L M ++ G GM+GG M I Q+
Sbjct: 118 GLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAGAGGMVGGQALDMEYTGKAGISLDQLQ 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ MKTGAL+ AC SGA++A + + E+ +G +G+ FQ+ADD+LD +
Sbjct: 178 TMHAMKTGALIRVACLSGAMLAGSKASVLEKASTYGAAIGVAFQIADDILDVVGNE 233
>gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 13/225 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ ++ L L + + L I Y L GGK+IR L+ L+ +
Sbjct: 5 SDLKSLVNNYLKSLNEK-------KDPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDD 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AIE H ++L+HDDL MD +RR KPTVH ++ TAI++G+ +L ++
Sbjct: 58 LEKTLPAACAIEVYHNFTLLHDDL--MDKSDLRRNKPTVHNVWNANTAILSGDAMLILSY 115
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + + ++ Q + + + ++KT L
Sbjct: 116 HLLAKAPQENLSAVLNEFNKVTLEICEGQQ---YDIEFETKNSVKAEDYLDMIRLKTAVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + + GAI+A AS + L FG N+G+ FQL DD LD D
Sbjct: 173 LASSIKMGAIIAGASDEDTNLLYDFGLNVGLAFQLQDDYLDVYGD 217
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 128/235 (54%), Gaps = 12/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++ L++ S+ N + A++Y++ +GGK+IR L+ +++
Sbjct: 3 MNNLKEEVNVWLNNYFENKGSY-----NKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKD 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N+ + + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A
Sbjct: 58 NYKDIMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
I+ + D + ++ G++GM+GGQ + + + I + + K KT
Sbjct: 118 MNIM-FNYSLNNDIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKYMHKNKT 176
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
G L+ +GAI+ +A + + + L FGE LG+ FQ+ DD+LD D L K+
Sbjct: 177 GKLIKSPIIAGAILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDVKVLGKE 231
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G + + E+ I+ L + Q + L A+ Y+L GGK++R L+
Sbjct: 4 GDFDAFVIESKMFIEKELARYANEL------QCPNVLRDAMTYSLEAGGKRLRPLLLFAT 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+
Sbjct: 58 LHAFGKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGD 117
Query: 122 GLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
GLLTYAF+++ + + I+ +L L L G +GM+ GQ ++ + + + ++
Sbjct: 118 GLLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTG L+ FA +GAI+A A++ E+E+L F + +G+ FQ+ DD+LD E
Sbjct: 178 YIHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEE 234
>gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22]
gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
Length = 342
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 24 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 84 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 142 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIG 198
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 199 AILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242
>gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 291
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/226 (33%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+RYA+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERSLEAGLPSATHAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ T + + L+ +D + + + +KTGAL+
Sbjct: 123 LLAAASTSAELRVGWMQSLATAAGAAGMCGGQALDMDATGQLQPLQDLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ ++++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGGAAADDQQRLGAFADALGLAFQVRDDILDVESSSA 228
>gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
Length = 303
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ +++Q I+ I+ L + +T ++ A+ Y+ L GGK++R L++E
Sbjct: 9 DIRAEIQTRVDEIEQIIKRYLPEEEGWQKT-----IMEAMNYSILAGGKRLRPMLMSETY 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AA+E IH YSL+HDDLP+MDN RRGK T H Y E I+AG+
Sbjct: 64 RLFGGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDA 123
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
LL YAFE + DN Q++ + G+ G + I + ++
Sbjct: 124 LLNYAFETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLD 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ + GA++A A++NE+ + +G+ FQ+ DD+LD L
Sbjct: 184 FIYRLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTSTLE 240
>gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18]
gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18]
gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ IL + + + L I+Y L LGGK+IR L+ +LF + T L
Sbjct: 5 NEILSKVNEYINNLTYDRKPQSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AFE ++
Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
++ + ++ Q M + E + + ++KT L+ A +
Sbjct: 123 SRHLSEVLRLFTVTALEIGEGQ---QYDMEFENRNDVKEEEYIEMIRLKTSVLLACAMKI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAI+A A + E L FGE +G+ FQL DD LD D KK
Sbjct: 180 GAILADAPAEDVENLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224
>gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
Length = 334
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + L ++ + + ++ + + + + L+ A GGK++R L A
Sbjct: 13 DQMAAYLADDMQAVSALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 67 RMCGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L +F++++ P + I S ++ LQ Q+ DE + +
Sbjct: 125 LFARSFQLMTEPGSMPVMRILSNAAATIAEGEVLQL------TAAQNLATDEAVYLQVVR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL A E G ++A AS ++ + L +G+ LGI FQ+ DDLLD + D
Sbjct: 179 GKTAALFSAATEVGGVIAGASTDQVKALYDYGDALGIAFQIVDDLLDYQGDTG 231
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
Length = 293
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/235 (35%), Positives = 122/235 (51%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ RI+ L L + ++ A+ Y+LL GGK+IR L E + +
Sbjct: 5 NQYLSRIEEALASYLPA-----KDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGD 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ A+E IH YSLIHDDLP MDN +RRG+P HIQY E A++AG+GLLT AF
Sbjct: 60 VQAAMPFACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAF 119
Query: 129 EIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKMK 184
E SP++ ++ L G +GM+GGQ++D+Q E + + K
Sbjct: 120 ETALSPESIKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
TGAL+ A + G +A A Q ++E + +G+ FQ+ DD+LD D L K
Sbjct: 180 TGALIQAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISDPETLGK 234
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 11/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+QE R + L + L A+RYA+L GGK++R LV A
Sbjct: 32 DFSVWMQERLARTEDALSR-------WVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 84
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LR G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+
Sbjct: 85 EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
L AFE++ + +++++L L G QGM GGQ +D+ ++ +
Sbjct: 145 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREM 204
Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + GA A L +G+ LG+ FQ+ DD+LD D
Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260
>gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602]
gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602]
Length = 309
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 13/243 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
G +L+ +R+D +L + + L+ A+RY ALLGGK++R +LV
Sbjct: 11 DGFTHELRAMQQRVDEVLTAYISAL-----PLADLPLVEAMRYGALLGGKRLRPYLVYAS 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF+++ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI++G+
Sbjct: 66 GQLFSLDLKNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILSGD 125
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ + R ++ L G GM GGQ L + + + +
Sbjct: 126 ALQTLAFSILADSEMPDVAVKDRLAMISELALASGSSGMCGGQALDLAAEGQQVGLDALE 185
Query: 179 MIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
I + KTGAL+ A GA+ A + + L + + +G+ FQ+ DD+LD D L
Sbjct: 186 QIHRHKTGALIRAAVRMGALAAGETGRAVLPILDNYAQAIGLAFQVQDDILDVVGDTATL 245
Query: 235 PKK 237
K+
Sbjct: 246 GKR 248
>gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
Length = 297
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 13/233 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ IDT + ++LL + + L A+ Y+L GGK++R L+ E A +
Sbjct: 7 KYKHDIDTKMREILLS-----KEEIAKPLREAMEYSLYAGGKRVRPVLLMEAARAVGGDP 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ L AAIE IH YSLIHDDLP++D+ RRGK T H + E AI+AG+GL A+E
Sbjct: 62 GSVLDYAAAIEFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAYE 121
Query: 130 IISSPKTQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQK 182
++ S + + + + + G + M+ GQ++DI + T + + +
Sbjct: 122 VMLSCIAKSDNMGDEILKKIKAANEIVMAAGTEAMVSGQVMDINSCSDKDSLTMLEKMHR 181
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ A GAI+A A + + R +GEN+G+ FQ+ DD LD D
Sbjct: 182 MKTGALITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGDSK 234
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDAEALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
Length = 295
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + R+D + L + + RL A+RY+++ GGK++R L
Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ ++ + IR +++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
Length = 294
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDADALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
22.1-21]
Length = 296
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ S+ N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESY-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L ++AFEI++ + L+ L G+QGM GQ LD+ E +++ +
Sbjct: 117 ALQSFAFEILTKTPNI-SAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175
Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
Length = 301
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +D L + + N L ++ Y++ +GGK+IR L+ ++
Sbjct: 14 INSLKEEVDQSLKAYFNKDREY-----NKVLYDSMAYSINVGGKRIRPILMLLSYYIYKS 68
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L AIE IH YSLIHDDLP MDN +RRGKPT H + E A++AG+ LL A
Sbjct: 69 DYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEA 128
Query: 128 FEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+I+ + + ++++ + G+ G +++ E I ++ + KT
Sbjct: 129 MKILVDYSLEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKT 188
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G L+ + SGA++A AS+ + ++L FG LG+ FQ+ DD+LD DL K
Sbjct: 189 GELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKDLGK 242
>gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 132/230 (57%), Gaps = 12/230 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+ I+ L + L + ++ ++ A+ Y+L GGK+IR L SL+ ++ A
Sbjct: 3 EEIELWLKEHLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKA 57
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL A I+
Sbjct: 58 MPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIM- 116
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ G+ GM+GGQ++D +D+ I +++ + K KTGAL+
Sbjct: 117 FEYSLKNGEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIK 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 177 SSILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 226
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
Length = 297
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Query: 11 ENSKRIDTI-LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
N + I L L + ++ + ++++ L ++RY++ GGK+IR LV A
Sbjct: 4 SNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLGK 63
Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +V ++E +H YSLIHDDLP MDN +RRGKPT H ++ + A++AG+GLLT
Sbjct: 64 KISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTT 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+FE +S I+ L+L + + + + ++ + KTG
Sbjct: 124 SFEWLSLTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTG 183
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD D L K
Sbjct: 184 ALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGDAKSLGK 236
>gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
Length = 342
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 24 QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 84 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 142 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIG 198
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 199 AILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 123 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDADALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ S L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA+L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 ATLELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLTYAF ++S +L + + ++S T + G + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
43184]
gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
43184]
Length = 324
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + T L I Y L LGGK+IR LV +L+ N TA+
Sbjct: 3 AFNDILQKIEQEITRLQFTYPPKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAV 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+E H ++L+HDDL MD+ RR KPTVH ++ TAI++G+ +L A+++I
Sbjct: 63 NPALGLEVFHNFTLLHDDL--MDDADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGE 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+++ I + G Q M + E + + ++KT L+ A
Sbjct: 121 TESESLKEILDLFTRTALEICGGQQ---YDMEFESRTDVTEEEYIEMIRLKTAVLLACAL 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GAIM +A + + E L FG N+G+ FQL DDLLD D
Sbjct: 178 KMGAIMGNAPKADAETLYQFGINIGLAFQLQDDLLDVYGDTA 219
>gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
Length = 295
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + R++ L+ L + + M+ RL A+RY+++ GGK++R L
Sbjct: 2 IDAYQASSQARVNAALEPLFVAPSPEMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116
Query: 124 LT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ ++ + + +R +++ +L H G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFSALLDPALSSVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ A GA+ + A + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEAAVHLGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 129/236 (54%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++E+ ++ L Q Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFVKESKTFVEEQLVRYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
LLT+AF+++ + + + +L L L G +GM+ GQ ++ + + ++ +++
Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTG L+ +A +GA++A A+ ++++L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
25259]
gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
25259]
Length = 343
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S L ++ + +D ++ + L ++ + S GGK++R LV A
Sbjct: 25 ESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINS-------GGKRLRPALVLLSA 77
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 78 GCFGYRGQAHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDF 135
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ I S ++ LQ + D IDE + +
Sbjct: 136 LYSRAFQMMVGVDNMEVMRILSDATNTIAEGEVLQLLNC------HDPDIDEENYLRVIR 189
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L A GA++ S+ +K+ L +G +LG FQL DD+LD D K
Sbjct: 190 YKTAKLFEAAGRLGAVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLK 243
>gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 299
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 133/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
++LQ R + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFANELQARVIRANDALRRFIA-----PQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 NMFGISDTTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L G+ GM GGQ L+ + ++ Q+
Sbjct: 117 LQTLAFSILSDAPMAEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176
Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGVQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
Length = 297
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+E+ ++ L Q Q + L A+ Y+L GGK++R L+
Sbjct: 5 AFDAFLKESKAFVEEQLVRYANQL------QCPNVLREAMIYSLEAGGKRLRPLLLFATL 58
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+G
Sbjct: 59 QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118
Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
LLTYAF+ + + ++ + +L L L G +GM+ GQ+ D++ E +
Sbjct: 119 LLTYAFQAVTAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTG L+ +A +GAI+A A+ ++E+L F + +G+ FQ+ DD+LD E
Sbjct: 179 IHKHKTGRLLEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEGTEE 234
>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 298
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 130/222 (58%), Gaps = 6/222 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ L ++ S + + L A+ Y+L GGK+IR LV F + L+
Sbjct: 16 KMLERELEESVSRLAA--PEVLKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAA 73
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AA+E IH YSLIHDDLPSMD+ +RRGKPT H + E AI+AG+ LLTY+F++++
Sbjct: 74 AAVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAP 133
Query: 137 QLKD-NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ D ++ L+ L G +GM+GGQ ++ +D+ +D ++ I KTG L+ F+
Sbjct: 134 EDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSV 193
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+GA+++ A ++ + L F +LG+ FQ+ DD+LD E +
Sbjct: 194 AAGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEGNEE 235
>gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 296
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
++ + + ++ L + +H+ + L A++Y LLGGK+IR FLV +
Sbjct: 4 FSQDLQHVQQRINHFLAKQFAHIDS-APAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L T A
Sbjct: 63 DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
FEI++ L + L+ +L+ G++GM GQ LD+ E ++ I KT
Sbjct: 123 FEILT-DIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181
Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ A + G I + A ++L + +G+ FQ+ DD+LD E D
Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233
>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
Length = 297
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPEIIAKGMEYATLNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
G+ LLTYAF ++S +L + + ++S T + G + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
Length = 292
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 98/233 (42%), Positives = 138/233 (59%), Gaps = 6/233 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
L ++ E + + LD+LL + RL A+RYA LG GK++R+F E
Sbjct: 2 DLSRRVAEAADLVTVALDELLPRGEGP-----ESRLTEAMRYAALGPGKRLRTFFALETG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F+++ LR A+ECIH YSL+HDDLP MD+ +RRG+PTVH YDE TA++AG+
Sbjct: 57 RMFDLDDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T AFEI++ P T IR++L+ L H G +GM GGQM+DI D V +Q+
Sbjct: 117 LQTAAFEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ A E ++A A E+ L F +LG+ +Q+ DDLLD E D
Sbjct: 177 LKTGALIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGDEA 229
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 11/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L + L E + + ++ + + R+ A+R++L GGK++R L
Sbjct: 12 SFDLKAFLTEYGRLVVAAMEKRIARY------PEESRVTQAMRHSLFAGGKRLRPILCMT 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A N + V AA+E IH YSLIHDDLP++D+ RRG PT H +DE TAI+AG
Sbjct: 66 SAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAG 125
Query: 121 NGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQ 176
+GLLT AFEI+S ++ ++H G GM+ GQM ++ + E + +
Sbjct: 126 DGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ I KTGA++ + SGA + + + L + +N+G+ FQ+ DD+L+ D
Sbjct: 186 LEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGD 242
>gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L+E + ++ L L RL ++ Y+L GGK++R L A+
Sbjct: 8 MKELLRERGQMVEEELAVCLD------GRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAAA 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL +AIE IH YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+GL
Sbjct: 62 LCGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---I 180
LT AF + ++ L + + L G GM+GGQ D+ D + I
Sbjct: 122 LTDAF--LMMCRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLRGI 179
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ +C GA++A AS + + +G LG+ FQ+ADD+LD D
Sbjct: 180 HAMKTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTA 234
>gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter
gallaeciensis BS107]
gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
2.10]
gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
2.10]
gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter
gallaeciensis BS107]
Length = 299
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 13/233 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L++ RI T +D L +D L +A+RYA+ GGK +R FLV E A L
Sbjct: 17 FAQALKDAQTRITTHMDARL---------GGDDALHAAMRYAVTGGKMLRGFLVLESARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L
Sbjct: 68 HGVAEAAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQ 127
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKM 183
T+AFE+++ P+ + + + G+ G + + +D Q+ +Q
Sbjct: 128 TFAFELLADPRIGPHALTLIRGLAQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNR 187
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ ++ +GA+MA A + LR + + LG+ FQ+ADD+LD E D K
Sbjct: 188 KTGCLISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 237
>gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + ++ + L+ + Q + A+RY+LL GGK++R L
Sbjct: 61 FDFKSYMIRKAESVSAALN-------VSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAA 113
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H ++ E A++AG+
Sbjct: 114 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGD 173
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + ++ L IG +G++ GQ+ D+ + ++ V
Sbjct: 174 ALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLE 233
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
I KT AL+ A GAIM ++ E E+LR + +G++FQ+ DD+LD E
Sbjct: 234 RLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTK 293
Query: 233 DLPK 236
+L K
Sbjct: 294 ELGK 297
>gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
Length = 327
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L S + Q L + Y L LGGK++R L A ++ A+ A+E
Sbjct: 11 FLEALNSRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEV 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H ++L+HDD+ MD+ +RRGK TVH+++D T I++G+ +I + + +
Sbjct: 71 FHNFTLLHDDI--MDDADLRRGKETVHVKWDVNTGILSGD------AMLIMAYQLFNSYD 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
+ L+ + + GQ D+ E D+ ++ + K+KT L+ A + GAI
Sbjct: 123 PETFYWLNQVFSKTALEVCEGQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGAI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A ++ E++ + +G N+G+ FQL DD LD D
Sbjct: 183 IAGVNKKEQQLIYDYGINIGLAFQLMDDYLDAFGDPA 219
>gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
Length = 296
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 97/242 (40%), Positives = 150/242 (61%), Gaps = 12/242 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ L E + R+ LD LL + R++SA+RYA LG GK++R FL+ E
Sbjct: 2 SAFDTHLTETADRVTVALDALLAR-----PDGPEARVISAMRYAALGPGKRLRPFLLIEA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + LR A+EC+H YSL+HDDLP MD+ +RRG+PTVH +YDE TA++AG+
Sbjct: 57 GFLVGADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
L + AFE+++ P+T +R++L+L L+ G +GM+GGQM+D+ E + + + +I
Sbjct: 117 ALQSQAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIIT 176
Query: 181 --QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
Q+MKTGAL+ F E+G ++A+A + ++ L F +LG+ +Q+ DDLLD E D
Sbjct: 177 RCQRMKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGDESLTG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 10/235 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K+++ + I+ L L + ++ ++ A+ Y+L GGK+IR L SL+
Sbjct: 3 KIKKMGEEIELWLKGYLDN-----KGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ A+ + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ LL
Sbjct: 58 EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKT 185
A I+ + + + G + + ++ +++ + K KT
Sbjct: 118 AMNIMFEYSLKNGEKALKACYTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAL+ + +GAI+ A+ + E L +G+NLG+ FQ+ DD+LD E D L KK
Sbjct: 178 GALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232
>gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
Length = 333
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L+ + + T++ + + + + L+ A GGK++R L A L
Sbjct: 14 MAAYLESDMAAVSTLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAAHL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ Q+ E + + K
Sbjct: 126 SRSFQLMVETGSLRVLDILANASATIAEGEVLQL------TASQNLATTEEVYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A A + L +G+ LGI FQ+ DDLLD + D
Sbjct: 180 TAALFSAATEVGGVIAGAPDDHVAALFEYGDALGIAFQIVDDLLDFQGDAG 230
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFDQWMRSVLERVETALGHYLPA-----ETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +A+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L + AF ++ D + + L G GM GGQ +D+ + T+ +
Sbjct: 117 LQSQAFVALTDAAALPADRQAALVC-ELALASGSIGMAGGQAIDLASVGVALTRDALETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 313
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 7/236 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + + E R++ L + + L A+RYA+L GGK++R LV
Sbjct: 8 SMRAWMDERLTRVEHALQEWVGVDEPEHLDVV---LGLAMRYAVLDGGKRLRPLLVLAAC 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
ALR A E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E A++AG+
Sbjct: 65 EAVRGEADAALRAACATELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDA 124
Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
L AFE+++ + ++++L L G GM GGQ +D+ + +
Sbjct: 125 LQALAFELLTPDDEVAVPVGMQARLCRLLARAAGSSGMAGGQAIDLASVGVKLDEERLRQ 184
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA H +Q ++ L +G +G+ FQ+ DD+LD D
Sbjct: 185 MHRLKTGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADSA 240
>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
Length = 296
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+DD L + RL A+ Y LLGGK++R FLV + V
Sbjct: 12 QRIDDCLSAQLESLPAMAP-RLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPA 70
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AA+ECIH YSL+HDDLP+MDN +RRG+PTVH +DE TAI+AG+ L T AF I++
Sbjct: 71 AAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPM 130
Query: 137 QLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFAC 193
R +++ +L G GM GGQ LD+Q E + ++ + + KTGAL+ A
Sbjct: 131 PDSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAV 190
Query: 194 ESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA+ A L+ + +G+ FQ+ DD+LD D
Sbjct: 191 ALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTA 233
>gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016]
gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 298
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 129/242 (53%), Gaps = 12/242 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + + +D L + + ++ N ++ ++ Y+L GGK+IR L
Sbjct: 5 TMEIKRVFKSLKEELDIYLREYMKDRGTY-----NRKIYDSMEYSLNAGGKRIRPMLFLL 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++N ++ + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G
Sbjct: 60 TYRMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ LL A I+ K + ++ + G +GM+GGQ +D ++ I +++
Sbjct: 120 DALLNEAMSIM-FRHCIGKGENAIRACSIISESAGAEGMIGGQTVDILSENVKISVDKLY 178
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGA++ + S A+ A + E ++L+C+GE LG+ FQ+ DD+LD D L
Sbjct: 179 YMHSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLG 238
Query: 236 KK 237
KK
Sbjct: 239 KK 240
>gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
Length = 276
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 129/237 (54%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + ++ S+ L ++L + H+D LL++++Y+L GK IR FLV
Sbjct: 1 MFYNISHLMENYSRLFTKELYNILPK------ADHDDILLASMKYSLFTPGKYIRPFLVN 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +FNVN L V AIE IH YSLIHDDLP MDN RRG+ + H ++ E AI+
Sbjct: 55 ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT AFE++S+ R +L+ IG QGM+ GQ+LD + D +
Sbjct: 115 GDALLTLAFEVLSTINESPYIRCRIIQVLTQ--AIGYQGMIKGQVLDTETIAKDINDIKT 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KT L ACE G I+ AS E L+ +G NLG FQ+ DD+ D +D+ K
Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229
>gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60]
Length = 301
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 85/239 (35%), Positives = 125/239 (52%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+++ +R D L L + L+ A+RY ALLGGK++R +LV
Sbjct: 2 ASFEQQMKTCRQRADAALIQALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF + AA+ECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 GGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ P + D R Q++ L H G+ GM GGQ L+ + + +
Sbjct: 117 ALQTLAFSILADGPMPGVADRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D K
Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGDAGRRALPALDRYAAAIGLAFQVQDDILDVVGDSSK 235
>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
Length = 294
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +T +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ETVVPAQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AF ++ L ++ L+ L G GM GGQ +D + Q+ +
Sbjct: 117 LQSQAFVALT-DADALAPAQQAALVRELALASGSIGMAGGQAIDLASVGMKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSADAMAALDVYAAAVGLAFQVVDDILDVTTDSA 231
>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 294
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 116/232 (50%), Gaps = 5/232 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
LPS L E ++ LD +L A RL A+RYA+L GGK++R L
Sbjct: 5 FDLPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIA 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ AL A+E IH YSL+HDDLP+MDN RRGKPTVH+++ AI+ G
Sbjct: 65 ACQAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANAILVG 124
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
+ LLT AFE+++ + + + L G+ GM+GGQ L + D +
Sbjct: 125 DALLTDAFEVLARGTEGVPRANIADAVTILARCAGINGMVGGQALDLIAGQDIADLETLE 184
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
+ +KTG L A G + + A+ +L +G GI FQ ADD+LD
Sbjct: 185 RVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD 236
>gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
Length = 332
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + +++++ + + + L+ A GGK++R L A L
Sbjct: 13 LAATLSSEMEAVNSLIQTRMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYEGEHHIKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ + + + + + K
Sbjct: 125 SRSFQLMVETGSLKVLDILANASATIAEGEVLQMTAASNLATDEAVY------LQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A AS+ E + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATEVGGVIAGASETEIKALFDYGDALGIAFQIADDLLDYQGDSK 229
>gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555]
gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555]
Length = 293
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 129/240 (53%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + + +D L + + ++ N ++ ++ Y+L GGK+IR L
Sbjct: 2 EIKRVFKSLKEELDIYLREYMKDRGTY-----NRKIYDSMEYSLNAGGKRIRPMLFLLTY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++N ++ + + AAIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+ G+
Sbjct: 57 RMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
LL A I+ K + ++ + G +GM+GGQ +D ++ I +++ +
Sbjct: 117 LLNEAMSIM-FRHCIGKGENAIRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGA++ + S A+ A + E ++L+C+GE LG+ FQ+ DD+LD D L KK
Sbjct: 176 HSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKK 235
>gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
Length = 360
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
S L ++ + +D ++ L ++ Q + ++SA GGK++R L
Sbjct: 44 FRSLLADDMQTVDRVIRARLHSDVVLIR-QVAEYIISA------GGKRLRPVLTLLAGKA 96
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 97 LDYRGEHLHELAAMIEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDFLY 154
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + ++ + LQ + G + Q + + K
Sbjct: 155 TRAFQMMVTTRNMAILEVMAEATNIIAEGEVLQLLNIGNTDVTE------AQYLQVIQYK 208
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A GA++A AS +++ L +G +LG FQ+ DD+LD D
Sbjct: 209 TAKLFEAASRVGALIAAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAE 259
>gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
Length = 332
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L + ++ ++ D + + + L+ A GGK++R L A L
Sbjct: 13 MAAYLNADMTAVNDLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I + ++ LQ Q+ DE + + K
Sbjct: 125 ARSFQLMTETNNMRVLAILANASATIAEGEVLQL------TAAQNLATDEGIYLQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T AL A + G ++A A + + L +G+ LGI FQ+ DDLLD + D K
Sbjct: 179 TAALFSAATQVGGVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGDPNATGK 233
>gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 324
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 12/225 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ IL + + + T L I Y L LGGK+IR L +++N + A+
Sbjct: 3 AFENILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAI 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +E H ++L+HDDL + + + +L+ +I++
Sbjct: 63 KPALGLEVFHNFTLLHDDLMDEADKRRNKPTVHKVWNANTA--------ILSGDAMLIAA 114
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
+ + + GGQ D++ E + + + ++KT L+
Sbjct: 115 YQLIGSTEHGHLKQVLDLFTQTAAEICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLA 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A ++GA++ ASQ + + L FG N+G+ FQL DDLLD D
Sbjct: 175 CALKTGALLGGASQKDADHLYAFGINIGLAFQLQDDLLDVYGDTA 219
>gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
Length = 299
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +L + ++ L + + LL+A+ Y+LL GGK++R L A
Sbjct: 2 TVKERLAAQAAEVEVYLKERFGARMRE--RGVPESLLAAMEYSLLAGGKRLRPALCLSFA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF A+ A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+G
Sbjct: 60 ELFGAARARAMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAAAILAGDG 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF + + ++ + G GM GGQ LD+ + + +
Sbjct: 120 LLTEAFGCMGRAWPGIAADLVLPALAEAARAAGAAGMGGGQALDMDYTARQGVTLAELAR 179
Query: 183 MKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M+ +C GAI+A A + R R +GE +G FQ+ DD+LD D L K
Sbjct: 180 MQALKTGALITASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAATLGK 239
>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
Length = 296
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + ++I+ IL L + + +T ++ A+ Y+L GGK++R L+ E
Sbjct: 2 NFKEEYTDRVEKIEKILKKYLPEKKGYQRT-----IMEAMEYSLMAGGKRLRPMLMWESY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+
Sbjct: 57 RLFGGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
LL YAFE + ++ + + L G+ GM+GGQ++D+Q+ +
Sbjct: 117 LLNYAFETACRAFEEESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGEVLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KT AL+ + +GA++A A + + R+ +G+ FQ+ DD+LD
Sbjct: 177 FIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDVTSTTE 233
>gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 296
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
++ + + ++ L + +H+ + L A++Y LLGGK+IR FLV +
Sbjct: 4 FSQDLQHVQQRINQFLAKQFAHIDSASAP-LAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L T A
Sbjct: 63 DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
FEI++ L + L+ +L+ G++GM GQ LD+ E ++ I KT
Sbjct: 123 FEILT-DIPHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181
Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ A + G I + A ++L + +G+ FQ+ DD+LD E D
Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233
>gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
23834]
gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
23834]
Length = 339
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 17/232 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + R++ +++ + + + RY + GGK++R L
Sbjct: 23 FQQHLPRDLSRVNAVIERAVQSEVALISQIG--------RYIISAGGKRLRPVLTILSGK 74
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 75 VLGYDEDPLYALAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNMFGNAAAVLVGDFL 132
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T AF+++ S + ++ + + LQ M G + + + +
Sbjct: 133 YTRAFQLMVSSGSLKILDVMADATNIIAEGEVLQLMNIGNTNITE------AEYVQVIQY 186
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GAI+A A+ ++ L+ +G ++G FQ+ DD+LD ++
Sbjct: 187 KTAKLFEAAAQVGAILAGATPEQENALKDYGRHIGTAFQIIDDVLDYSGNIE 238
>gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
Length = 298
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L L E R++ L+ L +H RL A+RYA+LGG K++R LV
Sbjct: 4 LERYLPEYQARVEAALERWLPPAQTH-----PARLHEAMRYAVLGGGKRMRPLLVYATGD 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A+E IHCYSL+HDDLP+MD+ +RRG+PT H YDEVTAI+ G+ L
Sbjct: 59 ALRLPRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDAL 118
Query: 124 LTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
+ AF ++S + R +++ L+ G +GM GGQ + + ++
Sbjct: 119 QSLAFRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYEAVGRQVTVAELED 178
Query: 180 IQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ A+ ERL + + +G+ FQ+ DD+LD D
Sbjct: 179 MHIHKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLDVIGDEA 235
>gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
Length = 302
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 97/236 (41%), Positives = 144/236 (61%), Gaps = 8/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
+ L + +++ +LD LL + R+ A+RYA L GGK+ R FLV +
Sbjct: 9 AQFEAGLATVAAKVEEMLDRLLPRVEGP-----EARIAEAMRYAALGGGKRFRPFLVAQS 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+LF V ALR AA EC+H YSL+HDDLP MD+ +R G P VH Q+DE TA++AG+
Sbjct: 64 AALFGVASEAALRAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
LLT AFEI++ P+T + +R +L+ L G GM+GGQ++D+ E D +
Sbjct: 124 ALLTLAFEILADPETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITR 183
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q++KTGAL+ F+CE+GAI+ AS + L + ++G+ +Q+ADD+LD E D
Sbjct: 184 LQQLKTGALISFSCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGDAA 239
>gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031]
gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031]
Length = 296
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMI 180
L ++AFEI++ + + + + + L + + I +++ +I
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELI 176
Query: 181 QKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A + G I + + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
XB1A]
Length = 324
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF ++
Sbjct: 66 TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTTLEICEGQQL---DMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG ++G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDSENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 300
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 16/246 (6%)
Query: 1 MNG---GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
MN S L++ I+ L + + + L A+ Y+LL GGK++R+
Sbjct: 1 MNFLHHNYQSILKQRVTLIEDFLKTCIQENN------ISSTLQHAMNYSLLAGGKRLRAV 54
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A+LF+++ + L A IE IH YSLIHDDLP+MD+ RRGKP+ H ++E A
Sbjct: 55 LCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHKAFNEALA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FID 173
I+AG+ LLT AF +S+ + + N + + G GM+ GQ +DI+ +
Sbjct: 115 ILAGDALLTDAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEHTGVSDVS 174
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +I + KTGAL +C +GA++A A+++ L+C+GE LG FQ+ DD+L+ D
Sbjct: 175 FNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDDILNVTAD 234
Query: 234 ---LPK 236
L K
Sbjct: 235 SITLGK 240
>gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L + +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----ENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDAAALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + +T L L + + + + + + + YA+L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N + ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 VTLELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLTYAF ++S +L + + ++S T + G + + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTG L+ + E I+A+ ++++E L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
Length = 294
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 6/219 (2%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+L+ + RL A+ Y+LL GGK++R +V + + A + A+E I
Sbjct: 17 ILKADYVLPNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMI 76
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H YSL+HDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L T AF+++ P +
Sbjct: 77 HAYSLVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQ 136
Query: 143 RSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ +++ +L H GL GM GGQ L+ D+ +D + + KTGAL+ + + G + A
Sbjct: 137 QLRMVQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCA 196
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+AS+ + L + + +G+ FQ+ DD+LD D L K
Sbjct: 197 NASEQQLSYLSVYAQAIGLAFQVQDDILDVISDTRTLGK 235
>gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 301
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 134/239 (56%), Gaps = 13/239 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+L + ++ L + L + + RL A+R+A L GGK+ R FLV E A LF
Sbjct: 7 QLGNAATAVEGFLAECLTEQQA---NGTPPRLADALRHAVLAGGKRFRPFLVFESAGLFG 63
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V AL AA+ECIHCYSL+HDDLP+MDN +RRG+PTV YDE TAI+ G+ L
Sbjct: 64 VARDAALPAAAALECIHCYSLVHDDLPAMDNDELRRGQPTVWKAYDEWTAILVGDALQAI 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------LDIQDEFIDETQVFMI 180
AFE+ S P+ R++L +L G GM+GGQM + +
Sbjct: 124 AFELTSDPRRHDDAEARAELTHALAIASGAIGMVGGQMLDLEAGRLPDQPAATIADIVRL 183
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
Q MKTG L+ CE GAI+ AS +++ L+ +GE+LG FQ++DDLLD E D+ K
Sbjct: 184 QAMKTGRLITVGCEMGAILGRASPSDRAALKTYGEHLGTAFQISDDLLDAEGSAADVGK 242
>gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
Length = 336
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + ++ ++ + + + + L+ A GGK++R L A +
Sbjct: 17 LAETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARM 70
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 71 CGYEGDHHLKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 128
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ D E + + K
Sbjct: 129 ARSFQLMVDTGSLRVLDILANASATIAEGEVLQM------TAATDLRTTEEIYLQVVRGK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T AL A E G ++A A+ + + L +G+ LGI FQ+ADDLLD + D K
Sbjct: 183 TAALFSAATEVGGVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAK 234
>gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
Length = 332
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L + ++T++ D + + + L+ A GGK++R L A L
Sbjct: 13 MAEYLAVDMAAVNTLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAAHL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I S ++ LQ Q+ DE+ + + K
Sbjct: 125 ARSFQLMTETNNMRVLAILSNASATIAEGEVLQL------TAAQNLATDESVYLQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A A + + L FG+ LGI FQ+ DDLLD + D
Sbjct: 179 TAALFSAATEVGGVIAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGDAS 229
>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
Length = 293
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERN------IEPRLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 294
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 6/233 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
L ++ + + + LD+LL + RL A+RYA LG GK++R F E
Sbjct: 3 DLEKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALETG 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F++ LR A+ECIH YSL+HDDLP+MD+ +RRG+PTVHIQYDE TAI+AG+
Sbjct: 58 KMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHIQYDEATAILAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T AFEI++ P T ++RS+L+ L G +GM GGQM+D+ D V +Q+
Sbjct: 118 LQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGAKGMAGGQMIDLLGVRDDLGAVARMQR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ FA E I+A A +E+ L F ++LG+ +Q+ DD+LD E D
Sbjct: 178 LKTGALIAFAFEIPLIIARAKDSERSALMGFAQDLGLAYQIVDDILDEEGDEA 230
>gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
Length = 299
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSL+HDDLP+MDN +RRG PT H+++ E AI+AG+
Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L G+ GM GGQ L+ + ++ +
Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMLSELAQASGIAGMCGGQALDLEAEGHQVELDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
Length = 323
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ I ++ + H++ + L I Y L +GGK++R L A +F ++
Sbjct: 1 MQLITDYQNEFVAFMQEHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL A+E H +SL+HDD+ G+L+ +I
Sbjct: 61 ALYAALAVEIFHNFSLVHDDIMDAAPLRRGHPTVHTKW--------NLNTGILSGDTMLI 112
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
+ + + L+ + + GQ D+ E + Q + KT L
Sbjct: 113 LAYQYFEQYEPNIFQELAKIFSKTAIEVCEGQQYDVDFEQQAQVSTDQYLKMIAYKTAVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
+ A + GAI+A ++ K+++ FG LGI +QL DD LD D KK
Sbjct: 173 VGAALQMGAIIAQTTEENKQKIYDFGLALGIAYQLQDDYLDTFGDASFGKK 223
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA+L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 VTLELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLTYAF ++S +L + + ++S T + G + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14]
gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14]
Length = 324
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 6/218 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
+ ILD + + L IRY L GGK+IR L+ +LF + + L
Sbjct: 5 NEILDKVNDYLNKLPYDRKPVSLYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMS 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL R + + + L+ +++
Sbjct: 65 ACALETYHNYTLLHDDLM-DQADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNCKP 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
++ +L G Q + + + E + + ++KT L+ A +
Sbjct: 124 EYQGKVLKLFTETALEIGEGQQYDMEFETR----MDVVEEEYIEMIRLKTSVLLACAMKI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAI+A AS + + L FGE +G+ FQL DD LD D
Sbjct: 180 GAILADASDEDADNLYKFGEQIGLAFQLQDDYLDVYGD 217
>gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
Length = 325
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D +L+ + A+ + L + I Y L LGGK+IR L+ L+ N L
Sbjct: 6 DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++
Sbjct: 66 AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + S T +G + +++ + + ++KT L+ A +
Sbjct: 124 ERYLKQ--VMDIFSQTALEICEGQQWDMEFETRNDVTV-PEYMEMIRLKTSVLLSAALKI 180
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++ S+++ +L FG +G+ FQL DD LD D
Sbjct: 181 GAVLGGGSEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220
>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
Length = 292
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L + L ++ Y+L+ GGK+IR L
Sbjct: 2 FKDYLASSKQHIEQWLGEVLTSPNREFKP-----LYESMNYSLMQGGKRIRPILSKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LTYAF+++++ +T + + G +GM+GGQ + +D+ I ++ ++
Sbjct: 117 LTYAFQLMTANETATAQEK-LDAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTGAL + E G I+ +A + L + LG++FQ+ DD+LD +L K
Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGK 233
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 127/234 (54%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L L++ D L+ LL TQ + A+R+++ GGK++R LV E A
Sbjct: 24 LKETLEQGRILADAALERLLP-----PGTQRPPSIHQAMRHSVFAGGKRLRPILVMEAAR 78
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + +GAA+E +H YSLIHDDLP++DN +RRG+PT H+ + E TAI+AG+
Sbjct: 79 MITGSLPDGVDELGAALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDA 138
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQ 181
L TYA+E+++ +T + ++ ++ + G + + + D V I
Sbjct: 139 LQTYAYEVMARLRTTAEARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIH 198
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + +G + A A + + +R+R FG++ G+ FQ+ DD+LD +
Sbjct: 199 RSKTGALITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQTSE 252
>gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
Length = 332
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L + ++ ++ D + + + L+ A GGK++R L A L
Sbjct: 13 MAAYLNADMTAVNDLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I + ++ LQ Q+ DE + + K
Sbjct: 125 ARSFQLMTETNNMRVLAILANASATIAEGEVLQL------TAAQNLATDEGIYLQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T AL A + G ++A A + + L +G+ LGI FQ+ DDLLD + D K
Sbjct: 179 TAALFSAATQVGGVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGDPNATGK 233
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 124/229 (54%), Gaps = 12/229 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L+D S+ N L +++Y++ +GGK+IR L+ S++ N+ +
Sbjct: 9 EINKWLNDYFENKGSY-----NKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIM 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ AIE IH YSLIHDDLP MDN +RRGKPT H + E AI+AG+GLL A ++
Sbjct: 64 PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVM-F 122
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + ++ G +GM+GGQ + + + I ++ + K KTG L+
Sbjct: 123 NYSLTHDKVALMASKVISEAAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKS 182
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ +GAI+ AS+ E L FG LG+ FQ+ DD+LD D L K+
Sbjct: 183 SIIAGAILGGASKENLEILDEFGSKLGLAFQIKDDILDVIGDSKVLGKE 231
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 26 QTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIEC 81
+ R+ A+RY+ L GGK +R LV A R AA+E
Sbjct: 28 EEVLPGPDVPPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVEL 87
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+H YSLIHDDLP+MD+ +RRG+P H+ + E AI+AG+ LLT AFE+++ D
Sbjct: 88 VHTYSLIHDDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADP 147
Query: 142 IRSQLMLSL----THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + GL G + +Q +D ++ I + KTGAL GA
Sbjct: 148 AVALAVAEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGA 207
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A A + E E L + G FQ+ DD+LD D
Sbjct: 208 RLAGAGEGELEALTAYATAFGEAFQIVDDILDVTGDEA 245
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ S + R++ L+ L + RL A+RY+++ GGK++R L
Sbjct: 2 IASYQALSQTRVNAALESLFQAPGPELA-----RLYDAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGGEARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ AF +++ T R Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ + A Q + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815]
gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
Length = 291
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
++ R++ L+ L ++ RL A+RYA+LGG K++R L L
Sbjct: 1 MRSVLDRVERALEQYLPA-----ESIEPARLHEAMRYAVLGGGKRVRPLLCHAAGELAGA 55
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+ L + A
Sbjct: 56 KAECLDAASAALEMIHVYSLVHDDMPCMDDDDLRRGKPTVHVKYDEATALLVGDALQSQA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++S L+L L + Q+ + ++KTGA
Sbjct: 116 FVALTSDVFSPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGA 175
Query: 188 LMCFACESGAIMA-----HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 176 LLRAAVRMGALTGQVDNGGPDAKALQALDAYSAAVGLAFQVVDDILDVTTDSA 228
>gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
L +K + D+ L RL A+RY++ GGK++R L +
Sbjct: 12 QEYLARIAKDAEAKFDEHLPPVKDR-----PCRLHEAMRYSMFAGGKRLRPGLAKATFDM 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F +A+E +H +SLIHDDLP +DN RRGK T H ++ E TA++AG+ L
Sbjct: 67 FGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVMAGDALC 126
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+AFE++ + + L+ + G ++ + + +D V I K
Sbjct: 127 IHAFEMMGKTGNAKAIELLAHLLGTYGMIGGEM-----TDIECEGKTVDLEIVDYIHYHK 181
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
T AL+ + GA++A AS+ + E +R +G ++G+ FQ+ DD+LD E+L K
Sbjct: 182 TAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELGK 236
>gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Ralstonia solanacearum UW551]
gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum IPO1609]
gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Ralstonia solanacearum UW551]
gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum IPO1609]
Length = 299
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L ++ RL +A+RYA LG GK++R LV
Sbjct: 2 SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + RV A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ + + L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFVVLAELGAVSPVTRAALVG-ELARASGSLGMAGGQAIDLQSVGVALSQDALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
Length = 305
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+L +R + L + ++ L+ A+RY LLGGK++R +LV
Sbjct: 9 FNQQLAVYQQRANNALLSFIAPL-----PFNHSDLVQAMRYGTLLGGKRLRPYLVYATGQ 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V T AA+ECIH YSL+HDDLP+MDN +RRG+PT HI++ E AI+AG+ L
Sbjct: 64 MFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDAL 123
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
T AF I++ P + R ++ L G+ GM GGQ L ++ I T++ I
Sbjct: 124 QTLAFSILADAPMPDVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTELEKI 183
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL+ A A+ A A +L + +G+ FQ+ DD+LD D K
Sbjct: 184 HRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTAK 240
>gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440]
gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440]
Length = 295
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ R+D L+ L + + + +RL +A+RY+++ GGK++R L
Sbjct: 4 TYQASCQARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
++ + D+IR ++ L G GM+GGQ +D+ Q + +
Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178
Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
>gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703]
gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703]
Length = 298
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L L ++Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+
Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 85/247 (34%), Positives = 133/247 (53%), Gaps = 17/247 (6%)
Query: 1 MNGGL---PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSF 56
M+ + + L + ++D LD L + A+ ++RL +RY++LGG K++R
Sbjct: 1 MDHRIRQAEAYLDQCRHQVDRELDRCLARNAT------SERLQETMRYSVLGGGKRVRPA 54
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A + TAL A+E IH YSL+HDDLP+MD+ +RRG+PT HI +DE +A
Sbjct: 55 LCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASA 114
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--E 174
I+AG+ L T AF ++S D R ++ L G QGM+GGQ +D++
Sbjct: 115 ILAGDALQTLAFALLSDAPAL-SDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSV 173
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
Q+ + + KTGAL+ + GA+ + ++ + L + LG+ FQ+ DDLLD E D
Sbjct: 174 AQLETMHRHKTGALIEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGD 233
Query: 234 L---PKK 237
K+
Sbjct: 234 TEVIGKR 240
>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
Length = 294
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ +L ++++ ++ ++ L H +T + A+ Y++ GGK++R L+ E
Sbjct: 2 MNEQLLQSTEEVEQVIYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L
Sbjct: 57 LFGGTGKEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
L YA E + ++ R + + + G D+ I + ++ I
Sbjct: 117 LIYAIETAARAFQMTDNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ A GA+MA AS E E + +G+ FQ+ DD+LD
Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQE 231
>gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
Length = 298
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ Q+ + I+ L + +L A+ Y+ L GGK+IR L+ E
Sbjct: 2 NFDEEFQKRKAEAEEIVCRYLPDEK-----EVPGKLTEAMNYSMLAGGKRIRPVLMLESY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AAIE IH +SL+HDDLP++D+ RRGK T H + ++AG+
Sbjct: 57 RMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAIDDDEFRRGKKTTHAAFGAALGVLAGDA 116
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
L +++ ++ + L G+ GMLGGQ +D+++E Q+
Sbjct: 117 LLNYAYETAMTAFDCCQDPAKVARALRVLAQKTGIGGMLGGQSVDVENEKNGVFQLERKT 176
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ GAI+A A + ++ G G+ FQ+ADD+LD L
Sbjct: 177 IDYIYVNKTAALLEAPLMIGAILAGADEKTVSAMQEIGHRAGLAFQIADDVLDVTSTLE 235
>gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
Length = 293
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + L ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKIIDESLFKEISERK------IEPTLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
Length = 336
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 82/234 (35%), Gaps = 11/234 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+RI+T LD LL H RL A RY+ LGG K +R L A
Sbjct: 41 QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + AA ++ + + A G
Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQK 182
+ + + L G +GM+GGQM D+Q E I Q I
Sbjct: 161 LAFGAVVAGVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEAIHL 220
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ + GA + A+ L +G LG+ FQ+ DDLLD D K
Sbjct: 221 RKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAK 274
>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
Clip81459]
gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816]
gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220]
gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
Length = 293
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERN------IEPRLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
Length = 299
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ +L + ++ + + + LLSA+ Y+L GGK++R L A
Sbjct: 2 TVKERLAAQAAEVEVYIRERFGARMRE--RGVPEGLLSAMEYSLMAGGKRLRPCLCLSFA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + + A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+
Sbjct: 60 ELFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDA 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179
LLT AF +S + + + G GM+GGQMLD++ ++
Sbjct: 120 LLTEAFGCMSRSWPAVAAELVLPALAEAGRAAGAAGMVGGQMLDMEFTARQGVTLAELAH 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q +KTGAL+ +C GAI+A A+++ R R +GE +G FQ+ DD+LD D
Sbjct: 180 MQALKTGALITASCVCGAILAGAAEDGISRAREYGEAVGAAFQIVDDILDEVGDAA 235
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ + +Q++ + ++ + ++ ++ ++ +++ ++ Y+LLGG K++R L E
Sbjct: 2 DIKTIMQDDKEIVERHIKKIMD-----IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+++ L + +E IH YSLIHDDLP+MDN +RRGKPT HI Y E AI+AG+
Sbjct: 57 KLFDIDFEQYLNIACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDS 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LL ++E++ + ++ N G+ GM+GGQ + +++ ID + I
Sbjct: 117 LLNLSYEVLFDFLYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ + S A ++ S+ L + N+G+ FQ++DD+LD D
Sbjct: 177 HYNKTAKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKE 231
>gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810]
Length = 296
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMI 180
L ++AFEI++ + + + + + L + + I +++ +I
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELI 176
Query: 181 QKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A + G I + Q ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233
>gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48]
gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48]
Length = 295
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ Q R+D L+ L + + +RL +A+RY+++ GGK++R L
Sbjct: 2 IAQYQQSAQARVDAALEPLFQAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116
Query: 124 LT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ ++ + D IR Q++ +L G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFSALLDPRLSPQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYM 176
Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEASVRLGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
Length = 293
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERN------IEPRLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1]
Length = 295
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ R+D L+ L + + + +RL +A+RY+++ GGK++R L
Sbjct: 4 TYQAGCQARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
++ + D+IR ++ L G GM+GGQ +D+ Q + +
Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178
Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ A A + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 12/239 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ L + + LD M +RL ++RY+ L GGK++R L
Sbjct: 81 SFDFQRYLSARADAVHDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 133
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG
Sbjct: 134 ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 193
Query: 121 NGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
+ L AFE ++ + + + L G G+ GQ+ D + E + +
Sbjct: 194 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 253
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KT L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD
Sbjct: 254 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSE 312
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
Length = 307
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 94/244 (38%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
KL +R+D L+ L + L A+RY ALLGGK++R FLV
Sbjct: 8 TDAFRQKLHSAHQRVDEALNQALQTL-----PFSDMPLSQAMRYGALLGGKRLRPFLVYA 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+FNV AAIECIH YSLIHDDLP+MDN +RRGKPT HI++ E AI+AG
Sbjct: 63 VGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAG 122
Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L T AFEI++ + R ++ L GL GM GGQ LD +D+ ID +
Sbjct: 123 DALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVAL 182
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTGAL+ A GA+ A + L + ++G+ FQ+ DD+LD +
Sbjct: 183 EKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242
Query: 234 LPKK 237
K+
Sbjct: 243 TGKR 246
>gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355]
Length = 299
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P L ++++ L LL + L++A++Y ALLGGK++R FLV
Sbjct: 2 DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+
Sbjct: 57 EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GGQ L + + + Q+
Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA A + L + + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
Length = 291
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ L R + L+ L TA RL +A+R+A+LGG K++R LV
Sbjct: 1 MSSAL---FDHWIARTERSLEACLPSTA-----LAPQRLHAAMRHAVLGGGKRMRPLLVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LF+ + + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A
Sbjct: 53 ATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AFE++++ + L+ +D + + +
Sbjct: 113 GDALQTRAFELLAAASVSADLRVGWLQSLASAAGAAGMCGGQALDIDATGQLQSLSDLER 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAHADQQRLDAFADALGLAFQVRDDILDVESSSA 228
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L L T +L A+RYA+LGG K++R L
Sbjct: 2 TFDQWMRSVLERVETALGHYLPA-----GTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L + AF ++ L + ++ L+ L G GM GGQ +D+ + T+ +
Sbjct: 117 LQSQAFVALT-DAAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
Length = 334
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 14/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 15 LATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLATARL 68
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 69 CGYTGPYHVHLAATVEFIHTATLLHDDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLF 126
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ QD DE + + K
Sbjct: 127 ARSFQLMVETGSLRVLDILANAAATIAEGEVLQL------SAAQDLATDEDIYLKVVRGK 180
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T AL A E G ++A A + + L +G+ LGI FQ+ DDLLD D K
Sbjct: 181 TAALFSAATEVGGVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTK 232
>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 297
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L+E + +T L L + + + + + + YA+L GGK++R FL+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+
Sbjct: 57 ELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
LLTYAF ++S + + + ++S T + G + + + +
Sbjct: 117 LLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTG L+ E I+A+ +++++ L + + +G+ FQ+ DD+LD E DL K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGK 236
>gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S]
Length = 293
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERN------IEPRLKESMLYSIQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDDNL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ +A S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 296
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++ +++I+ IL L QT H + A+ Y+L GGK++R L+ E
Sbjct: 2 NFKEDCRKRTEKIEEILRKYLPD-----QTGHQQIIEEAMEYSLMAGGKRLRPMLMKETF 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+
Sbjct: 57 DLFGGKGGVIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILTGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
LL YAFE S N + + L G+ GM+GGQ++D++ +
Sbjct: 117 LLNYAFETACSAFETDPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGELLA 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ + GA++A A + E ++ +G+ FQ+ DD+LD
Sbjct: 177 FIYRLKTGALIEASVMIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDVTSTTE 233
>gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 324
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + Q + L I Y L LGGK+IR L+ +L+ + L
Sbjct: 5 NEMLKLINEQLERLSDNREPRHLYEPIEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H Y+L+HDDL MD +RRG TVH ++D TAI++G+ +L A++ +++ +
Sbjct: 65 ACAIETYHNYTLLHDDL--MDCADLRRGCATVHKRWDANTAILSGDSMLVLAYQRMATCR 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + Q M + + + E + + ++KT L+ A +
Sbjct: 123 ADYLKEVIDLFTQTALEIGEGQ---QYDMDFEKRDDVTEDEYIEMIRLKTSVLLACALKI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+ ASQ + E L FGE +G+ FQL DD LD D
Sbjct: 180 GAILGGASQEDAENLYRFGEKIGLAFQLQDDYLDVYGDTK 219
>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 127/234 (54%), Gaps = 10/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ L E +++ L L RL A+ Y+LL GGK++R L A+L
Sbjct: 11 KTILAERGAQVEAYLQHCLDAI------PMQGRLKEAMYYSLLAGGKRLRPVLCLSTAAL 64
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F ++ + A++E IH YSLIHDDLP+MD+ +RRG+P+ H +DE TAI+AG+ LL
Sbjct: 65 FGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAGDALL 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQ 181
T AF ++S L + + S++ G GM+GGQ M + + +
Sbjct: 125 TDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDCTGKTNVPLETLQTLH 184
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGA+ AC SG ++A AS+++ LR +GE LG+ FQ+ DD+LD D
Sbjct: 185 ALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETADTA 238
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
Length = 294
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ R++ L L +L A+RYA+LGG K++R L
Sbjct: 2 TFEQWMRSVLDRVEDALGHYLPA-----DNVVPTQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AA+E IH YSL+HDD+P MD+ +RRGKPTVH+QYDE TA++ G+
Sbjct: 57 ELTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L + AF ++ + + L G GM GGQ +D+ + Q+ +
Sbjct: 117 LQSQAFVALTDADALSPVQQAAL-VRELALASGSIGMAGGQAIDLASVGLKLTREQLETM 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ A GA+ + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRAAVRMGALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231
>gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11]
gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11]
Length = 294
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 13/233 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L+E RI ++ L ND L +A+RYA+ GGK +R FLV E A L
Sbjct: 12 FAQALKEAQSRITAHMEARL---------GGNDPLHAAMRYAITGGKMLRGFLVLESARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V+ AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L
Sbjct: 63 HGVDDDAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDSLQ 122
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKM 183
T+AFE+++ PK + + + + G+ G + + +D Q+ +Q
Sbjct: 123 TFAFELLADPKIGPHALVLIRGLAQSSGKDGMVSGQMLDIAAETATTPLDLDQITRLQNR 182
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ ++ +GA+MA A + LR + + LG+ FQ+ADD+LD E D K
Sbjct: 183 KTGCLISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 232
>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
Length = 295
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ R+D L+ L + + +Q RL +A+RY+++ GGK++R L
Sbjct: 4 TYQASCQARVDAALEPLFIAPSKELQ-----RLYAAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
++ + D+IR ++ L G GM+GGQ +D+ Q + +
Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178
Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
>gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
Length = 304
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 114/236 (48%), Positives = 162/236 (68%), Gaps = 3/236 (1%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
P +L+ N+ ++ +L+ LL + LL A+R+A+L GGK++R FLV+E
Sbjct: 6 SSFPERLKSNAVAVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSET 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+L + ALR+GAA+ECIHCYSL+HDDLP+MDN +RRGKPTVH+ +DE TAI+AG+
Sbjct: 66 AALLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
LLT++F+II++P+T L D ++ L+L+L G GM GGQ LD+ E + ++
Sbjct: 126 SLLTFSFDIIAAPETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVL 185
Query: 181 -QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q MKTGAL+ FACE+GAI+A A+ +++RLR FGE +G+ FQLADDLLD D
Sbjct: 186 LQSMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTADAA 241
>gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814]
gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814]
Length = 303
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L E + ++ +LD + +L+ A+R+ AL GGK++R F+ E
Sbjct: 9 ASFEQSLAECADKVTVVLDKFIPSAIGP-----EAQLMRAMRHGALAGGKRLRPFITIEV 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF+ + LR +A+EC+H YSL+HDDLP MD+ +RRG PTVH +DE TA++AG+
Sbjct: 64 GRLFDAPEKSLLRAASALECVHAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
L AFEI+++ +T +R +L+ L + G +GM+GGQM+D+ F D+ +
Sbjct: 124 ALQALAFEILANTETHGDAGVRCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILA 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q+MKTGAL+ A E GAI+ A+++E + L F +LG+ +Q+ DDLLD + D
Sbjct: 184 RMQRMKTGALISCAAEFGAIIGGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGDEA 240
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L Q L ++ Y+L+ GGK+IR L
Sbjct: 2 FKEYLAASKQNIEQWLGEVLTS-----PNQEFKPLYESMNYSLMQGGKRIRPILSKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LTYAF+++++ KT + + G +GM+GGQ + +++ I ++ ++
Sbjct: 117 LTYAFQLMTANKTATAQEK-LDAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTGAL + E G I+ +A + L + LG++FQ+ DD+LD +L K
Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGK 233
>gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
Length = 324
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 6/220 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
++L+ L + H L I Y + LGGK+ R L AS+F+ + A++
Sbjct: 6 SLLEKLQTEFDRHSYGDAPVELYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E H ++L+HDD+ MD +RRG PTVH ++D TAI++G+ +L A++++
Sbjct: 66 MAVEVFHNFTLMHDDI--MDRAPLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPK 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ ++ ++ + Q + M + + E + + ++KT L+ FA E G
Sbjct: 124 EQLRSVLARFNRTAAEVCEGQQL---DMNFEKRWDVTEAEYIGMIRLKTSVLLGFALELG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I+A A + L GEN+GI FQL DDLLD D K
Sbjct: 181 GIIAGADDETVQLLYSAGENMGIGFQLKDDLLDVYGDPAK 220
>gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
Length = 291
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
+ SKL + +D +++L + A+ Y GGK+IR+ LV A
Sbjct: 1 MMSKLSHYKELVDNFINEL------AQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAAD 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F + +L + +AIE +H YSLIHDDLP MDN RRGKP H Y E A++ G+GL
Sbjct: 55 MFGADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----M 179
TY F +I+ ++ LS IG + + + +
Sbjct: 115 NTYTFNVIADAPIDDARKVKIVKWLSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNF 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I K KT L+ + GAI + + +RL +G G+ FQ+ DD LD D K
Sbjct: 175 IHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEK 231
>gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 303
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 131/245 (53%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M +KL + +R + +L + + L++A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFSTKLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+A
Sbjct: 55 TTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E
Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A GA+ A + + L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRAAVRLGALAAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L Q+ + + +L+ L + Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKVWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L + + + AAIE +H YSL+HDD+P+MDN +RRGKPT H++YDE TA+
Sbjct: 56 VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q+ + +KTGAL+ A GA+ ++ L + LG+ FQ+ DD+LDCE D
Sbjct: 175 QLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 295
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 10/234 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L L + +RI+T L L L A+RY LLGGK+IR FLV
Sbjct: 4 LSQDLPQLQQRINTFLAQQLN------VDSSPSPLAEAMRYGVLLGGKRIRPFLVYATGR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A++E +H YSLIHDDLP+MD+ ++RRG+PT HI +D TAI+AG+ L
Sbjct: 58 MLGADLNQLDYAAASVEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDAL 117
Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+AFEI++ Q + + LS + + L + + I ++ I +
Sbjct: 118 QAFAFEILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIHR 177
Query: 183 MKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTGA++ A + G I + + ++L+ + E +G+ FQ+ DD+LD E +
Sbjct: 178 NKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGES 231
>gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 297
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 135/241 (56%), Gaps = 11/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYSLSTDLSVIQQRINDFL-----STKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L ++AFE+I+ ++ + + + + SL G +GM GQ LD +D ++ ++
Sbjct: 116 GDALQSFAFELIAQDESLTD-SQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KT AL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD +
Sbjct: 175 ELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
Length = 294
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 130/236 (55%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ + L R++ L+ + + RLL A+RY LLGGK++R FLV +
Sbjct: 1 MHTALSHYQTRVNAALERIFDDL-----PVTDPRLLDAMRYGTLLGGKRVRPFLVYATGT 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + AA+ECIH YSLIHDDLP+MD+ ++RRG+PTVHI +DE TAI+AG+ L
Sbjct: 56 MLGAKEDDLDSLAAAVECIHAYSLIHDDLPAMDDDHLRRGQPTVHIAFDEATAILAGDAL 115
Query: 124 LTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
A+E+++ R ++ SL G QGM GGQ +D + I+ + +
Sbjct: 116 QGLAYELLAEAPLPAALEGNRIAMLRSLARASGYQGMCGGQAIDLASTGKRIELDALQQL 175
Query: 181 QKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ A E G+ +A + ++ L + E +G+ FQ+ DD+LD D
Sbjct: 176 HRLKTGALIRSAVEMGSYGVADLATEHRDALLRYAEAIGLAFQVQDDILDITADTE 231
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
++ +R++T L L T +L A+RYA+LGG K++R L
Sbjct: 2 TFDQWMRSVLERVETALGHYLPA-----GTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE TA++ G+
Sbjct: 57 ELTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
L + AF ++ L + ++ L+ L G GM GGQ +D+ + T+ +
Sbjct: 117 LQSQAFVALT-DAAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALEKM 175
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MKTGAL+ + GA+ S + L + +G+ FQ+ DD+LD D
Sbjct: 176 HRMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231
>gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103]
gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103]
Length = 299
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P L ++++ L LL + L++A++Y ALLGGK++R FLV
Sbjct: 2 DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+
Sbjct: 57 EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GGQ L + + + Q+
Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA A + L + + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 303
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 132/245 (53%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M ++L + +R + +L + + L++A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFSTQLNAHYQRTNRMLGHFIASL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF ++ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+A
Sbjct: 55 TTGELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E
Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMISELAHASGVAGMCGGQAFDLEAEGHQVDLAA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A GA+ A + + L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRAAVRLGALAAGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102]
gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102]
Length = 298
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L L ++Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLPY-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+
Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 303
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 5/240 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALL-GGKKIRSFL 57
M +++ R + L +L ASH + L +A Y+L GGK++R +
Sbjct: 1 MKADFDGEMESCRLRCNQRLAELPFDIASHSEAAAEHISELQNAYLYSLASGGKRVRPAI 60
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ A H +L + + + D + R + E +
Sbjct: 61 LYFAAQCVGGGHCESLDQASCALELVHTYSLIHDDLPAMDDDDMRRGKPSLHKAYEESTA 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDET 175
I L + L + +++ L GL+GM+GGQ +DIQ I
Sbjct: 121 ILVGDGLQARAFELLIDAPNLTAEQKIRMVKVLAEAAGLKGMVGGQYIDIQVTGADITLD 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ + MKTGAL+ + G I A+A++ + L +G ++G+ FQ+ADD+LD E D
Sbjct: 181 ELQAMHSMKTGALIRASLALGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGDAE 240
>gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
Length = 293
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE R+DT L +L +A++Y ALLGGK+IR FLV
Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
Length = 293
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + L ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKIIDESLFKEISERK------IEPTLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ + + + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAESKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 12/239 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ L + ++ LD M +RL ++RY+ L GGK++R L
Sbjct: 19 SFDFQRYLSARADAVNDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 71
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG
Sbjct: 72 ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 131
Query: 121 NGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
+ L AFE ++ + + + L G G+ GQ+ D + E +
Sbjct: 132 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 191
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KT L+ A SGAI+ + E ER+R + +G++FQ+ DD+LD
Sbjct: 192 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSE 250
>gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
Length = 297
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/243 (30%), Positives = 121/243 (49%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA+L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 VILELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLTYAF ++S +L + + ++S T + G + + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTG L+ E I+A+ +++KE L + + +G+ FQ+ DD+LD E D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFED 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J2-064]
Length = 233
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 10/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERN------IEPRLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D K
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ + R+D L+ L + + +RL +A+RY+++ GGK++R L
Sbjct: 4 AYQASSQARVDAALEPLFIAPTKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACQAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
++ + D IR ++ +L G GM+ GQ +D+ + Q + +
Sbjct: 119 LAFSALLDPRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHR 178
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ + A Q + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
>gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20]
gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 297
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 136/241 (56%), Gaps = 11/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYSLSTDLSVIQQRINDFL-----STKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L ++AFE+I+ ++ + + + + SL G +GM GQ LD +D ++ ++
Sbjct: 116 GDALQSFAFELIAQDESLTD-SQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD +
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
baltica SH 1]
gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
baltica SH 1]
Length = 317
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 79/248 (31%), Positives = 114/248 (45%), Gaps = 17/248 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
N L + ++ L Q A + +RL +AIRYA L GK++R L
Sbjct: 17 NESLKDYMDARRPAVEAAL-----QAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIM 71
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + +A+ A+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG
Sbjct: 72 AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 131
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----- 175
+ L + AF + + + L+ LD + +++
Sbjct: 132 DALQSMAFAHLHHSTSDATKSAALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADA 191
Query: 176 ---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ I KTGAL GAI A A N L + + G+ FQ+ DDLLDC
Sbjct: 192 ALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTS 251
Query: 233 -D--LPKK 237
D L K+
Sbjct: 252 TDERLGKR 259
>gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 299
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+ LQ R + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFSNALQARVIRANDALRRFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F ++ T AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 NMFGISDNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L G+ GM GGQ L+ + + Q+
Sbjct: 117 LQTLAFSILSDAPMVEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVTLEQLER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
Length = 294
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 117/238 (49%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M S ++ R + LD L + L A+RYA+LGG K++R LV
Sbjct: 1 MT-EFASWMRAQGARTEAALDQTLPNADT-----VPHTLHEAMRYAVLGGGKRVRPLLVH 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++
Sbjct: 55 AAGEVTGASAEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
G+ L T AF +++ ++ R +L+ L G GM GGQ +D+Q+ ++
Sbjct: 115 GDALQTQAFIVLAQAQSVQA-EARLKLVAELAVASGSVGMAGGQAIDLQNVGKAMSRDAL 173
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ L + +G+ FQ+ DD+LD D
Sbjct: 174 EAMHRMKTGALLRASVRMGALCGEIDAQGLSALDRYAAAVGLAFQVVDDILDVTADTA 231
>gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 130/240 (54%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + + L+ Q+ + ++ + +A Y+L+ GGK++R FLV
Sbjct: 2 TIKELITHAQTDVANTLNLYFDQSLN-----TDETIKAATHYSLMNGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI Y E AI+AG+
Sbjct: 57 KMLGADKQDLDVLAAAIECIHSYSLVHDDLPAMDDDELRRGRPTCHIVYGEAHAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
L AFE+I+ + +++ L H GLQGM+ GQ + D+ I ++ I
Sbjct: 117 LQALAFELIAKHNFNCSAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELERI 176
Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K+KTGAL+ A GA+ + + SQN E L FG +G+ FQ+ DD+LD E D L K
Sbjct: 177 HKLKTGALISCAITLGALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLGK 236
>gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32]
gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32]
Length = 293
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE R+DT L +L +A++Y ALLGGK+IR FLV
Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 81/236 (34%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L E K D L + + D ++SA++Y+L GGK++R L+ E
Sbjct: 4 FKETLLEKVKETDHELLACFDR-----KFDTPDIIVSAMKYSLFAGGKRLRPILMKETCR 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG- 122
+ + AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+
Sbjct: 59 CLGGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDAL 118
Query: 123 -LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
I P K ++ + L H+ G+ GM+GGQ D ++E I+E +++
Sbjct: 119 LNYAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYY 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ A G +A + E++ L + E +G+ FQ+ DD+LD D
Sbjct: 179 IHAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEK 234
>gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
Length = 291
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 14/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ K ++ L + + + + ++ A+ Y+L GGK+IR L+ A
Sbjct: 2 DFKAYYANQQKLVENYLKNRIAK-------KGISKVDEAMEYSLMAGGKRIRPILLMAAA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L V +E IH YSLIHDDLP MD+ RRG+ T H + E A++AG+G
Sbjct: 55 EAVGSKGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AFE++ K + + + + G GM+GGQ L+ + + I ++ +
Sbjct: 115 LLTLAFEVMLEQKNVDP-KVLIETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKL 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL A GA +A A+ + L F + LG+ FQ+ DD+LD E +L K
Sbjct: 174 HAGKTGALFIAAIRGGAHLAGANDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGK 232
>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
Length = 296
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
+ E+ + + ++ L + +H+ + L A++Y LLGGK+IR FLV +
Sbjct: 3 QFSEDLQHVQQRINHFLAEQFAHLDS-APAPLADAMKYGLLLGGKRIRPFLVYATGRMLG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L +
Sbjct: 62 ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AFEI++ T + + + + + L + + I ++ I KT
Sbjct: 122 AFEILTDIPTLSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEHIHLNKT 181
Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ A G I + A + ++L + +G+ FQ+ DD+LD E D
Sbjct: 182 GALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSE 233
>gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
Length = 304
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
Q +RI+ +LD+LL RL A+RY+ LGG K++R LV
Sbjct: 8 ESFAEFRQRRVERIEKVLDELLP-----PADILPGRLHEAMRYSTLGGGKRVRPLLVYAG 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ R AA+E IH YSL+HDDLP+MDN +RRG+PT H +DE TAI+ G+
Sbjct: 63 GQCLGLADELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
LLT+AF++++ P L + + L L G +GM+GGQ +D+ + Q
Sbjct: 123 ALLTHAFQVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQ 182
Query: 180 IQKMKTGALMCFACES---GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KTG L+ A + A +A + L + + +G+ FQ+ DD+LD D+
Sbjct: 183 MHLQKTGMLIRCALQLPLQAAAIA-PDASVASALLRYADRIGLAFQVQDDILDEIGDI 239
>gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 298
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA+L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGRQMPQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 297
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 77/243 (31%), Positives = 123/243 (50%), Gaps = 12/243 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + K +T++ L + H +T + A+ Y++ GGK++R L+
Sbjct: 1 MADNFKERFSQAVKETETVVYSYLPEETGHQKT-----IFEAMNYSVKAGGKRLRPLLMR 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E LF N AA+E IH SLIHDDLP MDN RRGK T Y A++A
Sbjct: 56 EVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
G+ L+ YAFE S + D ++ + + L G+ GM+GGQ +D+ + + +
Sbjct: 116 GDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREK 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I ++KTGAL+ + GA++A A+ E + + +G+ FQ+ DD+LD +
Sbjct: 176 LDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEE 235
Query: 234 LPK 236
L K
Sbjct: 236 LGK 238
>gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
Length = 294
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + R ++ +L H+ G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGMCVGQALDLGAENRQVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b]
gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 299
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
L +R++ L LL + L++A++Y ALLGGK++R FLV
Sbjct: 2 DFAKLLSAYHERVNLALTRLLDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+
Sbjct: 57 EMLKADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GGQ L + + ID Q+
Sbjct: 117 LQTLAFSILADQPMPGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A GA+ A + L + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRAAVRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTA 233
>gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348]
gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Metallosphaera sedula DSM 5348]
Length = 327
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 13/237 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L +E +++ +D L L A RY + GGK++R +V +
Sbjct: 2 DLDQYFEEIVAKVNATMDSFLH--------GDTRELYEASRYLISAGGKRLRPLVVVLSS 53
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L A+ GAA+E +H ++LIHDD+ D V
Sbjct: 54 DLLGGERHRAILAGAAVEVLHNFTLIHDDIMDQDTTRRGIPTVHVKWGIPTAILAGDLLH 113
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ S + S + + +G + + + + + +
Sbjct: 114 AKAFQILTESIKGLSGDVAYKVLDCFSRSVIVVSEGQAMDMEFEKRWDIRE-KDYLEMIR 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + G ++A S+ E L FGE +GI FQ+ DD+L D L K
Sbjct: 173 RKTAQLFACSAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITADEKELGK 229
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 9/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + I+ L++ + ++N + A++Y++ +GGK+IR L+ S++
Sbjct: 3 MNNLKEEINVWLNNYFEN-----KGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKD 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N+ + + AIE IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL A
Sbjct: 58 NYKEIMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
I+ + + ++ G++GM+GGQ + + + I + + K KT
Sbjct: 118 MNIMFNYSLNNDIKA-LKASKIISEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKT 176
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G L+ + +GAI+ A + L FGE LG+ FQ+ DD+LD D
Sbjct: 177 GKLIKSSIIAGAILGDAPNEDVNILDEFGEKLGLAFQIKDDILDVIGDEK 226
>gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582]
gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582]
Length = 300
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
S+LQ +R D L + + D ++ A+R+ ALLGGK++R FLV
Sbjct: 2 SDFNSQLQVYRQRADDALLGFIAPL-----PFNKDAMVEAMRHGALLGGKRLRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F V+ AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+
Sbjct: 57 GEMFGVSLNNLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGD 116
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ + R ++ L G+ GM GGQ L + I+ +
Sbjct: 117 ALQTLAFSILADADMPDVALRDRLAMVSELAGASGVAGMCGGQALDLAAEGRQINLEALE 176
Query: 179 MIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I ++KTGAL+ A GA+ A + +L + +G+ FQ+ DD+LD + K
Sbjct: 177 QIHRLKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVIGETAK 235
>gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703]
gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703]
Length = 303
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 85/245 (34%), Positives = 130/245 (53%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M +L + +RI+T L + L+ A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFLEQLHAHHQRINTTLRRFISAL-----PFQQIPLIEAMAYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LFN+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A
Sbjct: 55 STGRLFNLPLESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILA 114
Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + ++ D R ++ L G+ GM GGQ L+ + +D
Sbjct: 115 GDALQTLAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ + GA+ A A + L + +G+ FQ+ DD+LD D
Sbjct: 175 LEQIHRHKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum MolK2]
gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Ralstonia solanacearum MolK2]
Length = 299
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L ++ RL +A+RYA LG GK++R LV
Sbjct: 2 SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ + + L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFVVLAELGAVSPVTRAALVG-ELARASGSLGMAGGQAIDLQSVGVALSQDALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDTYAGAVGLAFQVVDDILDVTADTA 231
>gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
Length = 289
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 15/237 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + R+ LD L ++ A+RYA+ GGK++R FLV E A
Sbjct: 2 SFSKALTDAAARVQARLDAALADREEL-------PVVHAMRYAVQGGKRLRGFLVLESAR 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ A+IE +H YSL+HDD+P MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 LHGIVPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179
T AFE+++ P +R +L+ +L G +GM+ GQ LDI E Q+
Sbjct: 115 QTLAFELLADPALG-PAEVRIRLVETLAKASGAEGMVLGQALDIAAETAAVPLTLEQITH 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTGAL+C++ E+GAI+ A LR + LG+ FQ+ADD+LD E D K
Sbjct: 174 LQAGKTGALICWSAEAGAILGQADTG---PLRRYATALGLAFQIADDILDVEGDADK 227
>gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
KLH11]
gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
KLH11]
Length = 332
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + ++ ++ + + + L+ A GGK++R L A L
Sbjct: 13 LAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEA------GGKRLRPMLTLAAAQL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ + +R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 FDYSGDHHIRLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ D E + + K
Sbjct: 125 SRSFQLMVETGSLRVLDILANASATIAEGEVLQM------TAATDLDTSEAIYLQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A AS + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATEVGGVIAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSA 229
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 9/242 (3%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
MN + L + + ++++L +++ + + L+ A++Y+L GGK++R L
Sbjct: 1 MNQVNIKEILTQYTSEVNSVLKEIMNIEKNALAPG----LVKAMKYSLFSGGKRLRPILT 56
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + + +ALRVGA+IE +H YSLIHDDLPSMD+ RRGKP+ H + TAI+
Sbjct: 57 LMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAIL 116
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LLT+AF I+S ++ ++S L+ +D+ I ++
Sbjct: 117 AGDALLTFAFNILSKLNLPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEELK 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I KTGAL + +GA A+ + E L + LG+ FQ+ DD+LD + L
Sbjct: 177 KIHSGKTGALFKSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893]
gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893]
Length = 299
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 131/237 (55%), Gaps = 10/237 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
N L + L++ +ID L+ L Q ++RL A+RY++LGG K+IR L
Sbjct: 5 NTRLAAFLEQCRNQIDAELERQLCA-----SGQGSERLQQAMRYSVLGGGKRIRPALCLA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A+ +A+ ++E IH YSLIHDDLP+MDN +RRG+ T HI +DE TAI+AG
Sbjct: 60 AATALGQPRESAIVPACSLELIHAYSLIHDDLPAMDNDDLRRGRATTHIAFDEATAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF ++ + D +R ++ L G QGM GGQ +D + + Q+
Sbjct: 120 DALQTLAFGWLA-EAPGVDDQVRLAMIRELATASGHQGMAGGQAIDLESVGKQLTVEQLE 178
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KTGAL+ + GA+ A ++++ L + + LG+ FQ+ DDLLD E D
Sbjct: 179 NMHRHKTGALIAASVRMGALTATDVNEDQLAALTVYSQTLGLAFQVQDDLLDIEGDT 235
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 123/242 (50%), Gaps = 13/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L Q N +ID L +LL + RL A+ Y +L GGK++R L+
Sbjct: 5 TDSLDDFFQRNRAQIDQALANLLPE-----PEGPKARLNEAMGYCVLNGGKRVRPLLLLA 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ AL A+E IH YSL+HDDLP+MD+ +RRGKPT HI YDE TAI+ G
Sbjct: 60 TTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
+GL T AF ++ + Q++ L G QGM+GGQ +DI E ++
Sbjct: 120 DGLQTLAFSALT-ESSGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELE 178
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+ KTGAL+ + GA+ + A E LR F +G+ FQ+ DD++D E D L
Sbjct: 179 RMHLEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSVL 238
Query: 235 PK 236
K
Sbjct: 239 GK 240
>gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
Length = 313
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + E ++RID I+ L + + A+ Y++ GGK++R L+ E
Sbjct: 20 SLDKAIAERAERIDGIVAGYLPKVEGF-----PRTVCEAMAYSVEAGGKRLRPMLMEETY 74
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+
Sbjct: 75 RMLGGSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDA 134
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
LL YA+E S+ + L G+ GMLGGQ++D++ Q+
Sbjct: 135 LLNYAYETACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEY 194
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KTGAL+ + GA++A A + E + ++G+ FQ+ DD+LD D L K
Sbjct: 195 VYENKTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDVCGDSMVLGK 254
>gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1]
Length = 294
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + E + RI+ I++ L N + A+ Y++ GGK++R L+ E
Sbjct: 2 IDKLIAEKAARINDIVESYLPPADGF-----NRTVCEAMAYSVEAGGKRLRPMLMEETYR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI+AG+ L
Sbjct: 57 LFGGKSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
L YA+E +D M L G+ GM+GGQ++D++ + + Q+ +
Sbjct: 117 LNYAYETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYV 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GAI+A A + + + ++G+ FQ+ DD+LD D
Sbjct: 177 YENKTGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDVCGDSA 231
>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
Length = 297
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 9/240 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L + L T S L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
G+ L ++AFE++++ Q+ T + + L +++ + ++
Sbjct: 116 GDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSLDLIAENKAVSLEELE 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD + K
Sbjct: 176 LIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETDK 235
>gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE
PC73]
gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas
albilineans]
Length = 293
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
+ +R++ LD L Q RL +A+R+A LGG K++R LV +L
Sbjct: 4 EAVFARWRQRVEAGLDAHLPAI-----AQAPQRLHAAMRHATLGGGKRMRPLLVYASGAL 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 59 FGTDPARLDAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQ 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182
+ AFE+ + +R Q + +L G GM GGQ +D + +
Sbjct: 119 SLAFEL-LAKADAADATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHA 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ + GA+ A L F LG+ FQ+ DD+LD E
Sbjct: 178 LKTGALIRASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVEASSE 230
>gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
15897]
gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
15897]
Length = 284
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ I++++ + + + + A+ Y++ GGK++R L + ++V++ L
Sbjct: 3 MNNIIEEVNARLKEILSSYRPGLVKEAMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLD 62
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ AIE IH YSLIHDDLP MDN +RRGKPT H Q+DE TAI+AG+ LL + +I
Sbjct: 63 IACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHKQFDEATAILAGDALLNESMNVIIRM 122
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ L +G Q + + ++ I KTGAL+ +
Sbjct: 123 DLDDALKVEVLRYLYNASGLGGMIYGQQQDMYFETHTATLDELQAIHHDKTGALISVPMK 182
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
++A + + ++L G LG+ FQ+ DD+LD L KK
Sbjct: 183 IAGLIAK--KEDADKLENIGFKLGLAFQIQDDILDVTSTTETLGKK 226
>gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
B100]
gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris]
Length = 291
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ L + R + LD L RL +A+R+A+LGG K++R LV
Sbjct: 1 MSAAL---FERWLARTERQLDACLPS-----PALAPQRLHAAMRHAVLGGGKRMRPLLVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LF + A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+A
Sbjct: 53 ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGRPTVHIAFDEATAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE+++ + L+ +D + +
Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALDALQR 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A G + A +++RL F + LG+ FQ+ DD+LD E
Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSA 228
>gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 297
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 139/241 (57%), Gaps = 11/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYSLSTDLSVIQQRINDFL-----STKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L ++AFE+I+ ++ + + + + SLT G +GM GQ LD +D+ ++ ++
Sbjct: 116 GDALQSFAFELIAQDESLTD-SQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KTGAL+ + G ++ SQN K++L + + +G+ FQ+ DD+LD +
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQLERYAQAIGLAFQVQDDILDVIGETH 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
Length = 294
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 13/233 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L++ RI ++ L D L +A+RYA+ GGK +R FLV E A L
Sbjct: 12 FAGALKDAQARITAHMEARLA---------GGDDLHAAMRYAITGGKMLRGFLVLESARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V A+ AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE A++AG+ L
Sbjct: 63 HGVPAEAAIEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQ 122
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKM 183
++AFE+++ P + + + G+ G + + E + ++ +Q
Sbjct: 123 SFAFELLADPSVGPHALTLIRGLAQSSGKDGMVSGQMLDIAAETATEPLTLKEITRLQGR 182
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ ++ +GA++A A LR + LG+ FQ+ADD+LD E D K
Sbjct: 183 KTGCLIEWSATAGAVLAGADP---APLRQYASALGLAFQIADDILDVEGDAAK 232
>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 303
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
MN +L+ + I+ ++ L + + H +T +L A+ Y+++ GGK++R L
Sbjct: 1 MNDKETFKQELKTRTAEIEQLIKTYLPEESGHQKT-----ILEAMNYSMMTGGKRLRPML 55
Query: 58 VTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ E LF + + AA+E IH SL+HDDLP MD+ +RRGKP+ ++ E
Sbjct: 56 MQEMCRLFTGCLLESVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIG 115
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------ 170
++ G+ L+ YAFE +S D + + + + G + +
Sbjct: 116 VLTGDALMMYAFETAASAFETSIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGG 175
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + ++ I ++KTGAL+ + GA++ A+ + + + +G+ FQ+ DD+LD
Sbjct: 176 PIPKDKLDFIYRLKTGALIEASMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDV 235
Query: 231 EEDLP 235
Sbjct: 236 TGSEE 240
>gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 324
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L ++Y L +GGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINSHISDIQFTRTPVGLYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ ++ A++ ++S +
Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M G + + E + + ++KT L+ + + G
Sbjct: 124 EYLKEVMDLFSLTALEICEGQQMDMGF---ESRDDVKEEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+ AS+ + E L FG +G+ FQL DDLLD D
Sbjct: 181 AILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSA 219
>gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
Length = 297
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L+ + D ++ + L + N L A+ Y++ GGK++R L+
Sbjct: 2 NFKEELRIRTDYADNVVKEFLSKEEGF-----NKELCEAMNYSVNAGGKRLRPILLHTFY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + AA E +H YSL+HDDLP++DN RRG PT H ++ E TAI+AG+G
Sbjct: 57 KLFGGDSDIVKPCMAAYEMLHTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
LL A+E + + G+ GMLGGQ D+ + I
Sbjct: 117 LLHQAYETFIKIFDTEISTRTVKALKIFGDKTGINGMLGGQSADVLHTGEIISDELLYYI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A +G+++A + + +++ GE +G+ FQ+ DD+LD +
Sbjct: 177 YEKKTGALIEGAMLTGSVLAGCNDEDLAKIKRVGELVGLAFQIKDDILDIYGNEK 231
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/246 (33%), Positives = 130/246 (52%), Gaps = 17/246 (6%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRS 55
M G+ + + I+ +LD+ L +T L A+RY+LLGG K++R+
Sbjct: 6 MTDGVATDFLVWAKAKQGHIEIVLDEALPS-----ETTAPQVLHDAMRYSLLGGGKRVRA 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L A L N A A+E IH YSL+HDD+P MDN +RRGKP+ H QYD+ T
Sbjct: 61 LLCYAAAELCATNATIADAAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDAT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--D 173
A++ G+ L + AF+++S+P N + ++ L G GM GGQ +D+
Sbjct: 121 ALLVGDALQSLAFDVLSTPTLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALS 180
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ ++ + K+KTGAL+ A GA + + + + + E++G+ FQ+ DD+LD E D
Sbjct: 181 QHELENMHKLKTGALIQAAALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEAD 238
Query: 234 ---LPK 236
L K
Sbjct: 239 TSTLGK 244
>gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114]
gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114]
Length = 298
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L L ++Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+
Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLSAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
LD + + + L A+RY +L GGK++R LV + ALR A
Sbjct: 15 LDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACA 74
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSL+HDD+P MDN +RRGKPTVH++Y E A++AG+ + AFEI++ +
Sbjct: 75 VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALAFEILTPDEGVE 134
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGA 197
S + L G + + + + + KTGAL+ + + GA
Sbjct: 135 PALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMGA 194
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
+ + L +GE +G+ FQ+ DD+LDC D L K
Sbjct: 195 ACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDKLGK 236
>gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 323
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 14/223 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ L H + L I Y L +GGK++R L A++F ++ AL A+
Sbjct: 9 NEFLAFMKEHFVEREPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAV 68
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H +SL+HDD+ + + G+L+ +I + + +
Sbjct: 69 EIFHNFSLVHDDIMDEASLRRGQPTVHTKW--------NLNTGILSGDTMLILAYQYFEQ 120
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
L+ + + GQ D+ E + Q + KT L+ A + G
Sbjct: 121 YEPNIFQELAKIFSKTAIEVCEGQQYDVDFEKEVQVSTDQYLKMIAYKTAVLIGAALKMG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
AI+A ++ K+++ FG LGI +QL DD LD D KK
Sbjct: 181 AIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGDVSFGKK 223
>gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
23]
gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
23]
Length = 324
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
++ K+++ LD+L + + L I+Y L GGK++R L +L+ +
Sbjct: 5 EDLLKKVNEALDNL-------VYDRQPASLYDPIKYVLSIGGKRVRPVLTMLAYNLYKDD 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L+ + +E H ++L+HDDL MD+ +RRG TVH ++D AI++G+ +L AF
Sbjct: 58 PLSIMSQALGLETYHNFTLLHDDL--MDHADMRRGHETVHKKWDANRAILSGDTMLLQAF 115
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + + + Q + Q + E + + ++KT L
Sbjct: 116 ERVEDCDPAKLPAVFKVFIQTTLEIGEGQQLDVEF---EQRNDVTEDEYIEMIRLKTSVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ AC+ GAIMA A + E + FGE LG+ FQL DDLLD D
Sbjct: 173 LACACKVGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGDPA 219
>gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium
HTCC2083]
gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
HTCC2083]
Length = 333
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + L ++ ++ ++ + + + L+ A GGK++R L A
Sbjct: 12 DAMAAYLADDLNAVNVLIQQRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 66 HLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ + +I + ++ LQ QD E + +
Sbjct: 124 LFSRSFQLMVETGSMRVLDILANASATIAEGEVLQL------TASQDLSTTEAIYLQVVR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL A E G ++A A + + L +G+ LGI FQ+ DDLLD D
Sbjct: 178 GKTAALFSAATEVGGVIAGADEAHVKALFDYGDALGIAFQIVDDLLDMSGDAG 230
>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland
1988]
gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL
R2-561]
gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
Length = 293
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERN------IEPRLKESMLYSIQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ R L+ ++ + G +GM+GGQ L+ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDDNL-SFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ +A S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 299
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ S L+ +++ + + ++ L+ A+RY+L GGK++R LV
Sbjct: 4 FNMQSYLKFWGAKVEEFFETYVA-----CPDENVKGLVDAMRYSLFAGGKRLRPALVFSS 58
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F A AA+E +H YSLIHDDLP+MD+ RRGKPT H Y E TAI+AG+
Sbjct: 59 YGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHKMYGEATAILAGD 118
Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQV 177
GLLT AFE++ + ++ + L G +GM+GGQ ++ +D + V
Sbjct: 119 GLLTKAFEVMCNAEINPDVEPAQMLEAAYKLADAAGDRGMVGGQFTDMEAEDGVFNSATV 178
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
I KT L+ + CE GAI+ S+++K+R+R +G +G+ FQ+ DD+LD E+L
Sbjct: 179 DFIHMNKTSRLISYCCELGAILGFGSEDDKKRMREYGIRIGLAFQIVDDILDIASTTEEL 238
Query: 235 PK 236
K
Sbjct: 239 GK 240
>gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Alteromonadales bacterium TW-7]
Length = 295
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 126/240 (52%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ ++ + T L+ Q + + A Y+L GGK++R FLV
Sbjct: 2 SIKDYIERAQIDVATTLNSYFEQ-----PLDSDKTIKEATHYSLFNGGKRLRPFLVYAVG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AAIECIH YSL+HDDLP+MD+ +RRG PT HI Y E AI+AG+
Sbjct: 57 EMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGYPTCHIVYGEAQAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
L T AFE+I++ + +++ +L H G++GM+ GQ + D+ + ++ I
Sbjct: 117 LQTLAFELIATHNFNCSAQSQVKMIAALAHASGIEGMVAGQGLDIAATDKVVSVQELERI 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K+KTGAL+ A GA+ + A + E L FG +G+ FQ+ DD+LD E D L K
Sbjct: 177 HKLKTGALINCAITLGALCSEKADEQTLENLSVFGYAIGLAFQVHDDILDVEGDTFILGK 236
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 129/241 (53%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + R++ L+ L + RL A+RY+++ GGK++R L
Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H ++DE AI+AG+GL
Sbjct: 57 ALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGL 116
Query: 124 LT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
+ ++ + L +IR Q + +L H G GM+GGQ +D+ + Q +
Sbjct: 117 QSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ + + GA+ + A ++E + L+ + + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
Length = 324
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINNYISEIQFTREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AAIE H ++L+HDDL MD +RRGKPTVH +++ TAI++G+ +L AF ++++ +
Sbjct: 66 AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMELFGLTTLEICEGQQL---DMEFESRDNVTEDEYIEMIRLKTAVLLAGSLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG +G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 304
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 130/240 (54%), Gaps = 11/240 (4%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M + +L + ++ L L LL A+ Y+LL GGK++R L
Sbjct: 7 MTPQAMKQRLAAEALEVEAYLGGCLK------GRGIPCDLLKAMDYSLLAGGKRLRPVLC 60
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A LF + L AAIE IH YSL+HDDLP+MD+ +RRG P+ H ++ E TAI+
Sbjct: 61 LTTAGLFGLARDAVLPFAAAIELIHTYSLVHDDLPAMDDDDLRRGMPSNHKKFGEATAIL 120
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GLLT AF +++S ++ + + + G GM+GGQMLD++ + +
Sbjct: 121 AGDGLLTEAFCLMASAGAAVEASRVLSALSVVAAAAGAGGMVGGQMLDMEYTGRADVSLD 180
Query: 179 M---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
M + MKTGAL+ +C +GA++A A + ER+ +GE +G FQ+ DD+LD D
Sbjct: 181 MLRGMHAMKTGALIRCSCLAGALLAGAPHEDAERISHYGEAIGAAFQIVDDILDETGDEA 240
>gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 324
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I+Y L +GGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ +
Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M M E + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTALEICEGQQM---DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+ AS + E L FG +G+ FQL DDLLD D
Sbjct: 181 AILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGDPA 219
>gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
Length = 296
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 127/238 (53%), Gaps = 13/238 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
+L+ R+ IL+ L + + L A+RY AL GGK+IR LV
Sbjct: 5 QQLEHWQDRVFKILNTRLPSDDT-----NPQSLHQAMRYGALNGGKRIRPTLVYMTGQAL 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+E IHCYSL+HDDLP+MD+ +RRGKPT HIQ+ E TAI+AG+ L T
Sbjct: 60 GAELIDLDSPALAVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHT 119
Query: 126 YAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182
AFE ++ P + + Q++ L G GM GGQ +D++ + + +
Sbjct: 120 QAFEELASHPFSAKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHR 179
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
MKTGAL+ + GA+ A +Q E++ L + + +G+ FQ+ DD+LD E D L K
Sbjct: 180 MKTGALIKASVLLGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESDTTTLGK 237
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L+E + +T L L + + + + + + YA+L GGK++R FL+
Sbjct: 3 DFQVYLKEKTSFFETELKKELQELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+
Sbjct: 57 ELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---M 179
LLTYAF I+S + + + ++S T + G + + + +
Sbjct: 117 LLTYAFYILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTG L+ E I+A+ +++KE L + +G+ FQ+ DD+LD E +L K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGK 236
>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 295
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ R+DT L+ L + + +RL +A+RY+++ GGK++R L
Sbjct: 4 TYQASCQARVDTALEPLFIAPTKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
++ + DNIR ++ +L G GM+GGQ +D+ + Q + +
Sbjct: 119 LAFSALLDPHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHR 178
Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
>gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
Length = 295
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 127/239 (53%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
S +R+D L+ L + + +RL +A+RY+++ GGK++R L
Sbjct: 4 SYQASCQRRVDAALEPLFVAPTKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 59 GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118
Query: 126 -YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQK 182
++ + D++R ++ +L G GM+GGQ +D+ + Q + +
Sbjct: 119 LAFSALLDPHLSPQADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHR 178
Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ + GA+ A A Q + + L+ + + +G+ FQ+ DD+LD E D L K+
Sbjct: 179 HKTGALIEASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGDTATLGKR 237
>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Aggregatibacter aphrophilus NJ8700]
Length = 296
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 5/228 (2%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
+ +++ ++ L H+ + L+ A++Y LLGGK+IR FLV + N
Sbjct: 7 DLQQVQQRINSFLASQFEHINS-SPAPLVEAMKYGLLLGGKRIRPFLVYATGRILGANLA 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AAIE IH YSLIHDDLP+MD+ +RRG T HI +DE TAI+AG+ L ++AFEI
Sbjct: 66 HLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQSFAFEI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + + + L + + I T++ I KTGAL+
Sbjct: 126 LTDIPDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEHIHLNKTGALL 185
Query: 190 CFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + G I + A + ++L + +G+ FQ+ DD+LD E +
Sbjct: 186 TAALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEGNSE 233
>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
Length = 297
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L+E + +T L L + + + + + + + YA+L GGK++R FL+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLFVTL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L N + ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+ G+
Sbjct: 57 ELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---M 179
LLTYAF ++S +L + + ++S T + G + + +
Sbjct: 117 LLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I KTG L+ E I+A+ ++++E L + + +G+ FQ+ DD+LD E DL K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236
>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
M50/1]
Length = 296
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+
Sbjct: 57 RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
LLTYAFE + N +++ + G+ G + + + ++
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEVASKVGLAFQIQDDILDVTS 230
>gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis
NCTC 9343]
gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis NCTC 9343]
Length = 324
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I+Y L +GGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ +
Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M M E + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTALEICEGQQM---DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+ AS + E L FG +G+ FQL DDLLD D
Sbjct: 181 AILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGDPA 219
>gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
Length = 295
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + +Q RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A L + E +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTA 232
>gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
Length = 293
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 136/235 (57%), Gaps = 10/235 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFN 66
L + + ++ + Q + D L ++ Y+L GGK+IR L+ +
Sbjct: 3 LTQFRSHYEPLIQQEMAQLILSLSI--PDSLKESMHYSLQAGGKRIRPILLLAVLHEMTG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
H AL+V AAIE IH YSLIHDDLPSMD+ +RRG PT H + E AI+AG+ LLTY
Sbjct: 61 KEHPDALKVAAAIEMIHTYSLIHDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTY 120
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
+F +++ + + + +L+ ++ + G +GM+GGQ ++ +++ + ++ + ++K
Sbjct: 121 SFGVVA-RLEHVSSDDKVRLIDLMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
TGAL+ F+ +G I+A A+ +E L FG++LG+ FQ+ DD+LD +L K
Sbjct: 180 TGALLTFSILAGGILAQATNDEIIALSQFGQHLGLAFQIQDDILDVTGTSQELGK 234
>gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
Length = 328
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + + ++ ++ + + + L+ A GGK++R L A +
Sbjct: 9 LAATLSQELEAVNVLIRTRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARM 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 63 CGYEGDHHVKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ ++ +I + ++ LQ + DE + + K
Sbjct: 121 ARSFQLMVETESLRVLDILANASATIAEGEVLQM------TAASNLKTDEGIYLQVVRGK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A A + + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 175 TAALFSAATEVGGVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSK 225
>gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14]
gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14]
gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013]
Length = 298
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L V + AAIE IH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G
Sbjct: 59 ASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
Length = 406
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L E ++T++ + + + L+ A GGK++R L A L
Sbjct: 87 LAATLSEEMAAVNTLIRTRMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 140
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 141 CGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 198
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + +D + + + K
Sbjct: 199 ARSFQLMVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEDIY------LQVVRGK 252
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A ++G ++A AS+ E + L +G+ LGI FQ+ADDLLD + D
Sbjct: 253 TAALFSAATQAGGVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGDSS 303
>gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
putative / farnesyltranstransferase, putative
[Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + ++ + L+ + Q + A+RY+LL GGK++R L
Sbjct: 64 FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H + E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + + L IG +G++ GQ+ D+ + ++ V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A GAI+ ++ E ++LR +G +G++FQ+ DD++D E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
solanacearum CFBP2957]
gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
solanacearum CFBP2957]
Length = 299
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L ++ RL +A+RYA LG GK++R LV
Sbjct: 2 SDFAQWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ + + L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFVVLAELGAVSSVTRAALVG-ELARASGSLGMAGGQAIDLQSVGVALSQDALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNATALEQVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 324
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I+Y L +GGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ +
Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M M E + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTALEICEGQQM---DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+ AS + E L FG +G+ FQL DDLLD D
Sbjct: 181 AILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGDPA 219
>gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. 217]
gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. 217]
Length = 333
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L + ++ ++ + + + Q L+ A GGK++R LV A
Sbjct: 12 EQLAAHLATKMEAVNVLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 66 DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF+++ P + +I S ++ LQ QD E + +
Sbjct: 124 LFARAFQLMVEPGSLRVLDILSNASATIAEGEVLQL------SAAQDLATTEDIYLQVVR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL A E G ++A A ++ + L +G+ LGI FQ+ DDLLD + D K
Sbjct: 178 GKTAALFSAATEVGGVIAGAPEDHVKALFEYGDALGIAFQIVDDLLDYQGDVKSTGK 234
>gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 295
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN +L + ++ + ++ L A T + A+ Y+ L GGK++R L+
Sbjct: 1 MN--FQDELAKRTEETEKVIRSFLPAEAGFAGT-----MAQAMNYSMLAGGKRLRPMLIR 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E LF+ A +E IH +SLIHDDLP++D+ RRG+ T H Y E +++
Sbjct: 54 ETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDDDDYRRGRLTTHKVYGEAMGVLS 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G LL YA+E + K+ R L + + G + + M
Sbjct: 114 GVALLNYAYETMFQAFALTKEQDRVIHALRVVSQKTGIHGMLGGQSVDVENDGKPLEKEM 173
Query: 180 ---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I + KT AL+ + +GAI+A A++ E + N+G+ FQ+ DD+LD +
Sbjct: 174 LDYIYRNKTSALIEASMMTGAILAGANEQEVSAVEKAAGNIGLAFQIQDDILDVTSTAEE 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + ++ + L+ + Q + A+RY+LL GGK++R L
Sbjct: 64 FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MD+ +RRGKPT H + E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + + L IG +G++ GQ+ D+ + ++ V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A GAI+ ++ E ++LR +G +G++FQ+ DD++D E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 5/207 (2%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDL 92
N L ++RY++ GGK+IR LV A + +V ++E +H YSLIHDDL
Sbjct: 10 SNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDL 69
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
P MDN +RRGKPT H ++ + A++AG+GLLT +FE +S I+ L+L
Sbjct: 70 PEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAA 129
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ + + + ++ + KTGAL+ +AC +G I++ AS N+ E LR
Sbjct: 130 GPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRK 189
Query: 213 FGENLGIIFQLADDLLDCEED---LPK 236
+GEN G+ FQ+ DDLLD D L K
Sbjct: 190 YGENFGLAFQIYDDLLDVIGDAKSLGK 216
>gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
Length = 263
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+LQ+ + + ++ L + +T + A+ Y++ GGK++R L+ E
Sbjct: 6 NFKEELQQRTDYAEEVIRRWLPEERGFSKT-----MAQAMNYSMCAGGKRLRPILLLETL 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + A A IE IH +SLIHDDLP++DN RRG+ T H Y E +++G
Sbjct: 61 RLFGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDNDDYRRGRLTTHKVYGEAMGVLSGVT 120
Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
LL YA+E + + + + + + + G+ GMLGGQ +D++++ +
Sbjct: 121 LLNYAYETMFRAFELTDDKDRVIRAVRIMAEKTGIYGMLGGQSVDVENDGKPLEKDLLDY 180
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I + KT AL+ + +GA++A A + + + ++G+ FQ+ DD+LD +L K
Sbjct: 181 IYEHKTSALIEASMMAGAVLAGADEEQTSMIEQAASDIGLAFQIQDDILDVTSTSQELGK 240
>gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
Length = 290
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 123/234 (52%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L L+E + + L + + + + +RL ++ Y+++ GGK++R L+ A
Sbjct: 2 LKIYLKEKREIFEKYLQEKMTELK------YPERLAESMIYSVMNGGKRLRPVLMYMIAD 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+FN ++ AA+ECIH YSL+HDDLP+MD+ RRGK T H ++DE TAI+AG+ L
Sbjct: 56 IFNQDYSRIEDTAAALECIHSYSLVHDDLPAMDDDTYRRGKLTTHKKFDEATAILAGDAL 115
Query: 124 LTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LTYAF +I +S K + + +LS I ++ +++ I + I
Sbjct: 116 LTYAFYVISASEKIENSGKVNIIRILSDYSGINGMVGGQYVDMESENKEISFDTLKYIHS 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A E +KE L + E +GI FQ+ DDLLD E D K
Sbjct: 176 HKTGKLLKAAVELPLEALAIEGKQKEVLLEYSELIGIAFQIKDDLLDIEGDFEK 229
>gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis 638R]
Length = 324
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + T+ L I+Y L +GGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++G+ +L A++ +++ +
Sbjct: 66 TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M M E + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTALEICEGQQM---DMNFESREDVKEEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+ AS + E L FG +G+ FQL DDLLD D
Sbjct: 181 AILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGDPA 219
>gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
Length = 323
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
L + ++ H L + Y + GGK++R +V LF
Sbjct: 2 KFLDRYQDLVAEAIE-------KHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELF 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A++ AIE H ++LIHDD+ MD +RR KPT+H + I++G+ LL
Sbjct: 55 GGSLEKAMKPALAIEFFHNFTLIHDDI--MDGAPLRRNKPTIHTLHGINVGILSGDALLI 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A++ + +L + + Q M + + + + KT
Sbjct: 113 KAYQFFEDLEPELFKKCITLFSETGAVLCEGQQM---DVNFETNSNVTYEDYIKMITYKT 169
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
G L + + GA++A A++ E E L FG+++GI FQ+ DD LD + KK
Sbjct: 170 GVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224
>gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3]
gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3]
Length = 294
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+++++ L+ L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQETLTSYQQRNNQQLNLWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + ++ R +++ +L G GM GQ L ++ +
Sbjct: 112 GDALQTLAFTILAEGELNPNAESQRIKMVQALAQASGASGMCLGQALDLGAENRRVSLAD 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + + ++ LD S + + ++ A+RY+LL GGK++R L
Sbjct: 49 FDFMSYMIGKANSVNKALD-------SAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAA 101
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AL A+E IH SLIHDDLP +
Sbjct: 102 CELVGGEEFLALPAACAVEMIHTMSLIHDDLPFFGEDVA---------------VLAGDA 146
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
L + + + + + L IG +G++ GQ++D+ E +D+ V
Sbjct: 147 LLSFAFEHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLEL 206
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
I KT L+ A GAI + E ERLR F +G++FQ+ DD+LD E+
Sbjct: 207 LEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEE 266
Query: 234 LPK 236
L K
Sbjct: 267 LGK 269
>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
Length = 300
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+++E ++ I+ +L L + + +++ A+ Y++ GGK++R L+ E
Sbjct: 6 TFKEEMKERTEVIEKLLVKYLPKAEGY-----QSQIMEAMEYSVMAGGKRLRPMLMQETY 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+
Sbjct: 61 RLFGGEGKEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDA 120
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
LL YAFE + G+ GM+GGQ++D+ + +
Sbjct: 121 LLNYAFETAVKAFEIAPEKSLLIGKALKILAEKAGIYGMIGGQVVDVASCGVGLDEGMLN 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I ++KTGAL+ + GA++A A E E+++ +GI FQ+ DD+LD +L
Sbjct: 181 FIYELKTGALIESSMMIGALLAGAEDAELEKVQKIASGVGIAFQIQDDILDVTSTTEELG 240
Query: 236 K 236
K
Sbjct: 241 K 241
>gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 9/238 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N + + ++ L+ LL RL A+RYA L GGK++R LV
Sbjct: 3 NESFIGWMTSIQQYMEQALEKLLPSAD-----CAPQRLHEAMRYATLEGGKRVRPLLVFA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L R+GAA+E +H YSL+HDD+P MDN +RRGKPT HI YD+ TA++ G
Sbjct: 58 AGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMDNDVLRRGKPTCHIAYDDATALLVG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
+ L T AFE+IS P + + +++ +L H G GM GGQ +D+ + ++
Sbjct: 118 DALQTRAFELISQPMPDIAPASQLEMVRALAHAAGHAGMAGGQAIDLASVGLPLTLPELE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A +G++ S EKE L F + +G+ FQ+ DD+LDCE D
Sbjct: 178 FMHMLKTGALIRAAVLAGSMAGRELSAAEKEALDAFAKRIGLAFQVVDDILDCEADTA 235
>gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 323
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
L + ++ H L + Y + GGK++R +V LF
Sbjct: 2 KFLDRYQDLVAEAIE-------KHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELF 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A++ AIE H ++LIHDD+ MD+ +RR KPT+H + I++G+ LL
Sbjct: 55 GGSLEKAMKPALAIEFFHNFTLIHDDI--MDDAPLRRNKPTIHTLHGINVGILSGDALLI 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A++ + +L + + Q M + + + + KT
Sbjct: 113 KAYQFFEDLEPELFKKCITLFSETGAVLCEGQQM---DVNFETNSNVTYEDYIKMITYKT 169
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
G L + + GA++A A++ E E L FG+++GI FQ+ DD LD + KK
Sbjct: 170 GVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224
>gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 322
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 16/236 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + ++ R++ ++ L ++ + S GGK++R LV
Sbjct: 1 MTAQRIYDTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIES-------GGKRLRPLLVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++
Sbjct: 54 LASRATGYNEDNHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE++ ++ + S + +Q M + Q
Sbjct: 112 GDFLYARAFEMMVELESLPIMKVLSHATAVIAEGEVMQLMNVKNPDLTE------NQYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L + SGA++A A+ ++E L+ +G++LG+ FQL DD+LD D
Sbjct: 166 VIHNKTAMLFEASSHSGALLAGANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAE 221
>gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
solanacearum PSI07]
gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
solanacearum PSI07]
Length = 299
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L + RL +A+RYA LG GK++R LV
Sbjct: 2 SDFAQWMASVVARTESALERALP-----GEPVAPQRLHAAMRYASLGAGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++AG+
Sbjct: 57 GALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ R+ L+ L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFIMLAELGAV-SPATRAVLVGELARASGSLGMAGGQAIDLQSVGVALSQEALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B]
gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B]
Length = 294
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + R ++ +L H+ G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCVGQALDLGAENRQVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
NRL30031/H210]
gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
NRL30031/H210]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 130/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L + Q+ + + +L L ++Q L A+RY LGG K++R L
Sbjct: 1 MNPANELKTWQQKAQAQTELLLVHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L N + AAIE +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA+
Sbjct: 56 VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T L + ++ +L G GM GGQ +D + +++
Sbjct: 116 LVGDALQTQAFDVLS-RPTGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +KTGAL+ A GA+ + + + L + LG+ FQ+ DD+LDCE D
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163]
gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163]
Length = 303
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M ++L + +R + +L + + L++A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFNTQLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+A
Sbjct: 55 TTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ L T AF I++ P Q+ D R ++ L H G+ GM GGQ D++ E
Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A GA A A + L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRAAVRLGAFAAGDAGRAALPHLDRYANAIGLAFQVQDDILDVVGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640]
gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA+L GGK++R LV
Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSMGMAGGQTIDLANVGRQMPQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + +N L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVVLGAMSCPNLPENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Burkholderia rhizoxinica HKI
454]
gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC
2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC
2.5.1.29) [Burkholderia rhizoxinica HKI 454]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 8/238 (3%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ +++ R + L +L +L A+RYA+LGG K++R L
Sbjct: 3 MSATAFDEWVRDVLARTEVALSAVLP-----PADVEPMQLHQAMRYAVLGGGKRVRPMLC 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A+E IH YSL+HDDLPSMD+ +RRGKPTVH+QYDE T ++
Sbjct: 58 HAAGQALGAPGQRLDAAACALELIHVYSLVHDDLPSMDDDDMRRGKPTVHVQYDEATGLL 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AF ++S + L+ L + TQ+
Sbjct: 118 VGDALQSQAFIALASDALEAHRQAALMRELACASGSLGMAGGQAIDLASVGTRLSRTQLE 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ A + GA+ + E L + + +G+ FQ+ DD+LD D
Sbjct: 178 TMHRMKTGALLRAAVKMGALCGDGLSADIEAGLDAYAKAVGLAFQVVDDILDVTADSA 235
>gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF++++ + L + + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLA-RPSGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205]
gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205]
Length = 324
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D IL + A+ + L IRY L +GGK+IR L+ +LF N L
Sbjct: 5 DEILSMVNEFLANLPYERKPKSLYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMN 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++
Sbjct: 65 AVALETYHNYTLLHDDL--MDNADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQCD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + Q M + E + + ++KT L+ A +
Sbjct: 123 EKHLAKVLKLFTTTALEIGEGQ---QFDMEFENRNDVKEEEYIEMIRLKTSVLLACALKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A AS + E L FGE +G+ FQL DD LD D
Sbjct: 180 GAILADASDEDAENLYKFGEQIGLAFQLQDDYLDVYGDTK 219
>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
29799]
Length = 312
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/230 (36%), Positives = 122/230 (53%), Gaps = 9/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
L+ + ++ L S L A+ Y+LL GGK+IR L E +
Sbjct: 26 LRADCALVEDYLQHCFAGRDSRAD------LYDAMLYSLLAGGKRIRPVLALETCRMCGG 79
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ TAL A+E +H YSLIHDDLP MD+ +RRG+PT H Y E TA++AG+ LLT A
Sbjct: 80 DVTTALPFACAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDALLTAA 139
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
FE I+ T L L G +GM+GGQ + + + +++ +Q++KT
Sbjct: 140 FETIAEHGTSLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEELQRLKT 199
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ A E G I+A + E+ +R + + LG+ FQ+ DD+LD E D
Sbjct: 200 GALISAATEIGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGDEA 249
>gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
Length = 291
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 134/240 (55%), Gaps = 15/240 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+G + + + RI LDDL + Q + + YA GGK++R LV E
Sbjct: 1 MSG-FAAAQADGATRIAACLDDL-------IGAQPESVIRDGMAYATRGGKRLRGVLVLE 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L V A+ AAIEC+H YSL+HDDLP+MD+ +RRG+PTVH+++DE +AI+ G
Sbjct: 53 TAWLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVHVKWDEASAILVG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----Q 176
+ L T AFE +S P+ + L+ SL G GM+ GQ LDI E +
Sbjct: 113 DALQTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIAAETAAAPLSLDE 172
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +Q KTGAL+ ++ E+GA++A A LR + E +G+ FQ+ADD+LD D K
Sbjct: 173 ITRLQAGKTGALIRWSAEAGALLARADP---APLRRYAEAIGLAFQIADDILDVTGDAEK 229
>gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
Length = 299
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ R + L + Q N L+ A+ Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQTCVTRANDALRQFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 57 TMFGVSLTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L G+ GM GGQ L + + +D +
Sbjct: 117 LQTLAFSILSDAPMPEVADRDRIAMISELAQASGVAGMCGGQALDLQAEGQQVDLAALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRAALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
Length = 341
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 VGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I + + LQ Q+ E + + K
Sbjct: 126 ARSFQLMTDTGNMRVMEILANASAVIAEGEVLQL------TAAQNLATTEDIYLRVIRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G I+ A +++ + L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227
>gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon]
Length = 343
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MNG + QE + + + +++ Q MQ N+ + A+ Y GGK++R L
Sbjct: 1 MNG---QQFQEEVQYFNCRMGEVIEQK---MQRCSNEIIHDALSYIRDTGGKRLRPILCL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A+ AIE +H SL+HDD+ +D+ Y+RR P+ Y E AI+
Sbjct: 55 LSAEAVGGSREKAMTTAIAIELLHNASLVHDDI--IDDNYVRRKSPSNPAMYGEKKAIVI 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + E+++ + S + + L+ + E
Sbjct: 113 GDFLFGISCEMLAKCGVPEVVGLVSSAVSDIAMGEYLEF------SLRTLQETTEQSYME 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KT + + E+GA++ S+ E R +G+N+GI FQ+ DD+LD D K
Sbjct: 167 VATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGIAFQIQDDILDICGDPAK 223
>gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82]
gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82]
Length = 296
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+
Sbjct: 57 RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
LLTYAFE + N +++ + G+ G + + + ++
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230
>gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1]
gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1]
Length = 324
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L +++ S +D +D+LL T + L A RY + GGK++R ++
Sbjct: 2 MLMTLVDEIKNRSSHVDAAIDELLPVTR-------PEELYKASRYLVDAGGKRLRPAVLI 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + L A+E +H ++LIHDD+ D+ G P VH+++ E AI+A
Sbjct: 55 LAAEAVGSNLRSVLPAAVAVELVHNFTLIHDDIMDRDDIRR--GMPAVHVKWGEAGAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AFEI+S + + ++ +LS T +G + + + + ++
Sbjct: 113 GDTLYSKAFEILSKVENEPVRVLKCMDVLSKTCTEICEGQWLDMDFETRKKVTE-SEYLE 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KT L A + GA++ AS E L +G +GI FQ+ DD+LD
Sbjct: 172 MVEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTA 224
>gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153]
Length = 298
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGGTVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF++++ + L + + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLA-RPSGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
Length = 294
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ +L ++++ ++ ++ L H +T + A+ Y++ GGK++R L+ E
Sbjct: 2 MNEQLLQSTEEVEQVVYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF + AAIE IH SLIHDDLP MDN RRGK T + Y A++AG+ L
Sbjct: 57 LFGGTGIEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
L YA E + + R + + + G D+ I + ++ I
Sbjct: 117 LIYAIETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ A GA+MA AS E E + +G+ FQ+ DD+LD
Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTSSQE 231
>gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
Length = 333
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLASARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYEGPYHVHLAATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ P NI S ++ LQ + +D + + + K
Sbjct: 126 ARSFQLMVEPGNLRVLNILSNAAATIAEGEVLQLTAAQDLKTTEDIY------LQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A + + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 180 TAALFSAATEVGGVIAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGDSS 230
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
Length = 289
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 9/227 (3%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
K ++ L + +N R+ ++ Y+L GGK++R L+ +++N ++
Sbjct: 6 IKKEVEEYLSRYF-----EGKDNYNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYK 60
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ + AAIE IH YSLIHDDLP MDN +RRG+PT H + A++AG+GLL A I
Sbjct: 61 EVIDIAAAIEMIHTYSLIHDDLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNI 120
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKMKTGAL 188
+ K + L ++ GM+GGQ++DI E + + K KTG L
Sbjct: 121 M-FKYCIGKGEEALKACLMISKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGEL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A SGAI+ A ++ E L +G+ LG+ FQ+ DD+LD D
Sbjct: 180 IKAAVVSGAILGGAPLHDVELLSQYGDKLGLAFQIEDDILDIIGDTK 226
>gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75]
gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1]
Length = 299
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
campestris pv. campestris str. 8004]
gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
campestris pv. campestris str. 8004]
Length = 291
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M+ L + R + LD L RL +A+R+A+LGG K++R LV
Sbjct: 1 MSAAL---FERWVARTERQLDACLPS-----PALAPQRLHAAMRHAVLGGGKRMRPLLVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+LF + A+E IH YSL+HDDLP+MD+ +RRG PTVHI +DE TAI+A
Sbjct: 53 ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE+++ + L+ +D + +
Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQR 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A G + A +++RL F + LG+ FQ+ DD+LD E
Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVESSSA 228
>gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 306
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
++L+E+ +R+D + L+ Q L+ AIRY+ LLGGK++R FLV +
Sbjct: 5 DFANELRESHQRVDEAISRYLI----MFLKQDVSLLMQAIRYSVLLGGKRLRPFLVYQTG 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + AAIECIH YSLIHDDLP MDN +RRG PT H+++ E A++AG+
Sbjct: 61 KLFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDA 120
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVF 178
L T AF I+S + D R +++ +L G GM GQ ++ ++ I TQ+
Sbjct: 121 LHTLAFTILSEAHMPTITDQDRLKMIATLASASGANGMCLGQSLDLINKNNKNISATQLE 180
Query: 179 MIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE--DL 234
I + KTG+L+ A GA+ A + + L + +G+ FQ+ DD++D D
Sbjct: 181 TIYQYKTGSLIRAAVRIGALAAGNKSCDDVLSFLDHYATTIGLAFQIQDDIIDISHAYDQ 240
Query: 235 PKK 237
KK
Sbjct: 241 KKK 243
>gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606]
gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606]
Length = 323
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D +L + + + L ++Y L +GGK+IR L+ LF + + L
Sbjct: 4 DELLVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMP 63
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MDN +RRG TVH +++ TAI++G+ +L A+E I+
Sbjct: 64 ACGLETYHNYTLLHDDL--MDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQC- 120
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
+ + T + GQ D+ E ++ + + ++KT L+ A
Sbjct: 121 -----SQIYLSDVLHTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLLACA 175
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK
Sbjct: 176 LKIGAILAGASKQDQDYLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223
>gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
Length = 295
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 11/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L+ ++ ++ +++ L + +T +L A+ Y++ GGK++R L+
Sbjct: 1 MN--FNEMLETRTREVEAVVERYLPAADGYQKT-----VLDAMNYSVRAGGKRLRPMLME 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E LF + AAIE IH SLIHDDLP MDN +RRG PT ++Y A++A
Sbjct: 54 ETYRLFGGSGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
G+ LL YA E + +D + + L G+ GM+GGQ +D+ ++ + +
Sbjct: 114 GDSLLIYAVETAAKAFALTEDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEK 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I +KTGAL+ + GA++A A + E + +G+ FQ+ DD+LD +
Sbjct: 174 LDFIYHLKTGALLESSMMIGALLAGADEEETRLVEQMAAAIGLAFQIQDDILDVTSSME 232
>gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. TM1035]
gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Roseovarius sp. TM1035]
Length = 333
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L + ++ ++ + + + Q L+ A GGK++R LV A
Sbjct: 12 EQLAAHLAAKMEAVNLLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 66 DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF+++ P + +I S ++ LQ QD E + +
Sbjct: 124 LFARAFQLMVEPGSLRVLDILSNASATIAEGEVLQL------SAAQDLATTEDIYLQVVR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL A E G ++A A + + + L +G+ LGI FQ+ DDLLD + D
Sbjct: 178 GKTAALFSAATEVGGVIAGAPETQIKALFEYGDALGIAFQIVDDLLDYQGDAK 230
>gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus]
gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
Length = 333
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 VGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I + + LQ Q+ E + + K
Sbjct: 126 ARSFQLMTDTGNMRVMEILANASAVIAEGEVLQL------TAAQNLATTEDIYLRVIRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G I+ A +++ + L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227
>gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
Length = 289
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 14/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L + + D +L ++ A+ +A GGK++R FLV E A L
Sbjct: 2 FTQRLDAAAAAVQAHFDKVLAAFE-------PLPIVEAMAHATSGGKRLRGFLVLETARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ AIE +H YSL+HDDLP MDN +RRG+PTVH ++D+ TA++AG+ L
Sbjct: 55 HDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
T AFE+++ P +R+ L LSL G QGM+ GQ LDI E ++ +
Sbjct: 115 TLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ KTGAL+ ++ ++GA +A A L+ + + LG+ FQ+ADD+LD D
Sbjct: 175 QQGKTGALIGWSAQAGARLAQADT---AALKRYAQALGLAFQIADDILDVTGDSA 226
>gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
Length = 294
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+++++ LD L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + R ++ +L H+ G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCIGQALDLGAENRQVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 300
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 109/238 (45%), Positives = 145/238 (60%), Gaps = 8/238 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
++L E + + L D L + RLL+A+R+ AL GGK++R FLV E A
Sbjct: 6 FQARLSEAADLTEARLADCLAGAHGSV-AGAPARLLAAMRHGALGGGKRLRPFLVIESAR 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF + A+ A+ECIHCYSL+HDDLPSMD+ +RRGKPTVH YDE TAI+AG+GL
Sbjct: 65 LFGADLQAAIGAATALECIHCYSLVHDDLPSMDDDDLRRGKPTVHRAYDEATAILAGDGL 124
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQ 181
LT AF +++ + + + L G GM+GGQ+LD+ E ++ +Q
Sbjct: 125 LTLAFGLVAGEEGLSPKARVALVALLARDA-GAAGMVGGQVLDLAAENAVLSEDEIARMQ 183
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
MKTGAL+ FACE+GAI+A A E+ RLR FGE +G+ FQLADDLLD D L K
Sbjct: 184 AMKTGALIAFACEAGAIVADAGAAERARLRRFGEIVGLAFQLADDLLDETADAAVLGK 241
>gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 311
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L S L + I+ +D LL R++ A+RYA LGG K++R +L E AS
Sbjct: 20 LRSSLSNRATAIEAAIDSLLPPV-----PGAEGRVVDAMRYATLGGGKRLRGYLTAEVAS 74
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF V A RV A++E +H YSL+HDDLP+MDN +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75 LFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDAL 134
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
T AFEI++ T IR L+ +L G GM+GGQM+D+ E +V +
Sbjct: 135 QTMAFEILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLH 194
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ +A E+GAI+ A + R+ +G +LG FQ+ADD+LD +L K
Sbjct: 195 ALKTGCLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDATASAEELGK 252
>gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
Length = 289
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 15/237 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + R+ LD L ++ A+RYA+ GGK++R FLV E A
Sbjct: 2 SFSKALTDAAARVQARLDAALADREDL-------PVVHAMRYAVQGGKRLRGFLVLESAR 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ A+IE +H YSL+HDD+P MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179
T AFE+++ P +R +L+ SL G +GM+ GQ LDI E Q+
Sbjct: 115 QTLAFELLADPALG-PAEVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTGAL+ ++ E+GAI+ A + LR + LG+ FQ+ADD+LD E D K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227
>gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
Length = 297
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
+ L Q + + +L+ L Q + L A+RY LGG K++R LV
Sbjct: 2 ITNNLKQWQQRAQAQTEILLERALPSI-----NQAPETLHEAMRYVTLGGGKRLRPLLVW 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L + A+ECIH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++
Sbjct: 57 AAAELGDSVQAACEAAAVAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLV 116
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L T AF+++S+ + +++ L G GM GGQ +D+ + +D + Q+
Sbjct: 117 GDALQTLAFDVLSTATAL-SPARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQL 175
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ N L + LG+ FQ+ DD+LDCE D
Sbjct: 176 EQMHGWKTGALIRAAVALGALSCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEADTA 234
>gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
Length = 298
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF++++ P + + +L+ L + + +T +
Sbjct: 119 DALQTQAFDVLARPSSLPASRQLAMLSVLAKAGGSSGMAGGQAIDLANVGKQMAQTDLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S+N L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 303
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/245 (34%), Positives = 130/245 (53%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M ++L + +R + +L + + L++A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFSTQLSAHYQRTNRMLGHFIATL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+A
Sbjct: 55 TTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ L T AF I++ P Q+ D R ++ L G+ GM GGQ D++ E
Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVDLAA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A GA+ + + + L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRAAVRLGALASGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
Length = 297
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 98/239 (41%), Positives = 137/239 (57%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L S+L ++ ID D LL +RL +A+R+A + GGK++R L
Sbjct: 1 MSALLASELARIAQEIDARFDTLLT-----PPDDSRERLYAAMRHAAIGGGKRLRPLLAC 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LF V+ ALR G AIE IH YSLIHDDLP+MD+ +RRG+PTVH YDE TAI+A
Sbjct: 56 ASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+G AFEI +S T +RS+L+ +L G GM+GGQ +D+ E E +
Sbjct: 116 GDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDA 175
Query: 180 IQKMKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I +++ F+ E+GAI+ + +LR + +LG+ FQ+ADDLLD E D
Sbjct: 176 ISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGDPA 234
>gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
Length = 323
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D IL+ + + L I+Y L LGGK+IR L+ +L+ + + L
Sbjct: 4 DEILNIFNEYLDNLQYARKPHTLYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSS 63
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H Y+L+HDDL MDN IRRG+PTVH ++D TAI++G+ +L A+ ++
Sbjct: 64 ACAIETYHNYTLLHDDL--MDNAAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCD 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + Q + + E + + ++KT L+ + +
Sbjct: 122 GSKLKEVIDLFTETALEIGEGQQLDMDF---ETRNDVTEAEYIEMIRLKTSVLLACSLKI 178
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A +S + + L FGE +G+ FQL DD LD D
Sbjct: 179 GAILAGSSAEDADYLYRFGEQIGLAFQLQDDFLDVYGDTK 218
>gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
Length = 327
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + + + L I Y L LGGK++R L+ +L+ +
Sbjct: 7 EQLLQQIHEYIGNLSYMREPMGLYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQ 66
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A IE H ++L+HDDL MD +RR KPTVH ++DE TAI++G+ A I++
Sbjct: 67 AAGIETYHNFTLLHDDL--MDKADMRRNKPTVHKKWDENTAILSGD-----AMLILAYQF 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFA 192
+ + + + GQ D++ E + + ++KT L+ A
Sbjct: 120 MMKECPLECVERVMEVFGRTALEVCEGQQWDMEFEHRLDVTVDEYIEMIRLKTSVLLAAA 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ GAI+ A + + + L FG +G+ FQL DD LD D KK
Sbjct: 180 LKIGAILGGAPEKDAQLLYDFGIKMGLAFQLQDDYLDVYGDPAVFGKK 227
>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
Length = 294
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ L L E I+ + + + S D L +++ Y+L GGK+IR L+
Sbjct: 1 MSVQLLQFLDEIKDIIEERMPAHIERLNS------PDMLKNSMLYSLKAGGKRIRPALLL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F + + + AIE IH YSLIHDDLPSMD+ IRRGKPT H + E AI+A
Sbjct: 55 ATMKSFQKDISQGIDLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ LLTY+FEI++ K L+ L G +GM+GGQ ++ +++ + +
Sbjct: 115 GDALLTYSFEIVAKMKGVDPAKT-LCLIEELARAAGPEGMVGGQVADIEGENQKLTVEGL 173
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KTGAL+ FA +GA +A AS+ + E +R F LG++FQ+ DD+LD E D
Sbjct: 174 EYIHHHKTGALLSFAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGDQA 231
>gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
Length = 289
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 15/237 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + R+ LD L ++ A+RYA+ GGK++R FLV E A
Sbjct: 2 SFSKALTDAAARVQARLDAALADREDL-------PVVHAMRYAVQGGKRLRGFLVLESAR 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ A+IE +H YSL+HDD+P MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179
T AFE+++ P +R +L+ SL G +GM+ GQ LDI E Q+
Sbjct: 115 QTLAFELLADPALG-SAEVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTGAL+ ++ E+GAI+ A + LR + LG+ FQ+ADD+LD E D K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227
>gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D]
gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
Length = 303
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ LD L +T RL +A+RYA LG GK++R L
Sbjct: 2 SDFAQWMASVVARTESALDRALP-----PETVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGDASPAALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ R+QL+ L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFILLAELGAV-SAPTRAQLVGELARASGSLGMAGGQAIDLQSVGVALSQDALEA 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E + + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGLNAAALEHVDTYAGAVGLAFQVVDDILDVTADTA 231
>gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
Length = 303
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M ++L + +R + +L + + L++A+ Y +LLGGK++R FLV
Sbjct: 1 MT-DFSAQLNAHYQRTNRMLGHFITSL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF++ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E TAI+A
Sbjct: 55 TTGELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEATAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ L T AF I++ P TQ+ D R ++ L G+ GM GGQ D++ E
Sbjct: 115 GDALQTLAFSILADAPMTQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVNLAA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A GA+ A A ++ L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRAAVRLGALAAGDAGRDALPYLDRYANAIGLAFQVQDDILDVVGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum]
Length = 289
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 138/236 (58%), Gaps = 14/236 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
S L+ ++RI+T L + L + + A+RYA+ GGK++R FLV E A+L
Sbjct: 2 FQSSLKSAAERIETRLTEALA-------GAADQPVTQAMRYAVSGGKRLRGFLVLESAAL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ A+ AA+E +H YSL+HDD+P MD+ +RRG+PTVH+++D+ TA++ G+ L
Sbjct: 55 YDIAPEAAVDAAAAVEALHAYSLVHDDMPCMDDDDLRRGQPTVHVKWDDGTALLTGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMI 180
T AFE++S+P +R L+ SL G+ GM+ GQ DI E ++ +
Sbjct: 115 TLAFELLSAPACHPDPAVRIDLVASLARASGIDGMVLGQAQDIAAETAGRSLTLDEITEL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
Q KTGAL+ ++ E+GA +A A L + LG+ FQ+ADD+LD E D K
Sbjct: 175 QANKTGALIRWSAEAGARLARAD---IAPLTAYSTALGLAFQIADDILDVEGDAAK 227
>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
Length = 294
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 8/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-A 62
+ ++ I+ ++ L + S + L ++ Y++ GGK+IR L+T A
Sbjct: 1 MQQFQEKYLSEIEAVIVRFLEEHTS------DQTLKDSMLYSIHAGGKRIRPLLLTATVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
S L + AA+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+AG+G
Sbjct: 55 SFHKSMTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF+++S + I LS T + +++ + ++ I +
Sbjct: 115 LLTAAFQLLSLADLEPDKKILLLQQLSHTAGTAGMVAGQAADIQGENQQLTLDELISIHE 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L+ FA +G I+A ++ + L F ++G+ FQ+ DDLLD
Sbjct: 175 RKTGELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTSTTE 227
>gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 332
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L ++ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAEALSDDLAAVNALIRERMQSEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F ++ I SQ ++ LQ + + ++ + + K
Sbjct: 126 AKSFLLMVDTGNLDVLRILSQASATIAEGEVLQLTASRSLATDEAVYMK------VIRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A L +G+ LGI FQ+ DDLLD E
Sbjct: 180 TAALFSAATEVGGVIAGQGPEVCRALFDYGDALGIAFQIVDDLLDYEGTEA 230
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L+ K ID L +L ++ Y++ GGK+IR LV
Sbjct: 3 DLTVFLEHYKKVIDESL------FKEISVRNIEPKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + L +R A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALNADPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
Length = 295
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 143/238 (60%), Gaps = 9/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M +L E + ++ LD L+ + L+ A+R+A L GK++R F V
Sbjct: 1 MT-NFEQRLTEVADKVTVALDQLIP-----PASGPEANLMRAMRHAALANGKRMRPFFVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E ++F + + LR AA+ECIHCYSL+HDDLP MD+ RRG+PTVH +DE TA++A
Sbjct: 55 ETGAMFGASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQV 177
G+ LLT AF+I++S +T +R L+ L G +GM+GGQM + ++ D +
Sbjct: 115 GDALLTLAFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTI 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q++KTGAL+ +A E+G I+ HA + E+ L F +LG+ +Q+ADD+LD E D
Sbjct: 175 TRMQRLKTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDES 232
>gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
Length = 324
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 11/230 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L ++++ S +D +++LL H + L A RY + GGK++R ++
Sbjct: 2 MLMMLIDEIKKRSSHVDAAINELL-------PVTHPEELYKASRYLVDAGGKRLRPAVLI 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + L A+E +H ++LIHDD+ MD IRRG P VH+++ E AI+A
Sbjct: 55 LAAEAVGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDNIRRGMPAVHVKWGEAGAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AFEI+S + ++ +LS T +G + +D + +
Sbjct: 113 GDTLYSKAFEILSKVENDPVRILKCMDVLSKTCTEICEGQWLDMDFEKRDRVTE-LEYLE 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + KT L A + GA++ AS E L +G +GI FQ+ DD+LD
Sbjct: 172 MVEKKTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLD 221
>gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442]
gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442]
Length = 298
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L V H + AAIE IH YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G
Sbjct: 59 ASELGGVVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905]
Length = 299
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T A+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPATAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 10/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+L E + + LD+ A H L +AIR ALL GK++R L E
Sbjct: 18 DFRRRLHERQQLVARALDEHFPPGAGH--------LTAAIREALLADGKRLRPILCLEAC 69
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL A+E IH +L+HDDLP+MD+ R G+P +H + E AI+AG+
Sbjct: 70 EWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDA 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQ 181
LL +AF +++S + + + + G + + + +
Sbjct: 130 LLVHAFGLLASTRGVPAERVTVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHVH 189
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT + A GA M A ++ E L +G LG FQ++DDLLD ++ K
Sbjct: 190 TWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLDARDEKGK 244
>gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401]
gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 5 str. 8401]
Length = 299
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
Length = 287
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 125/236 (52%), Gaps = 13/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + L + +I ++ L QT D L A+ YAL GGK +R FLV E
Sbjct: 1 MTAGFTAALSQAQAKISIHMEHRLPQT---------DLLHQAMLYALRGGKMLRGFLVLE 51
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L +V AL AIECIH YSL+HDDLP MD+ +RRG+PT+H ++DE TA++AG
Sbjct: 52 SARLHDVPETAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTLHRKWDEATAVLAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFM 179
+ L T AFE+++ + + M G+ G + + + + Q+
Sbjct: 112 DSLQTLAFELLAREEVGPHAISLIRTMAEAAGKDGMVSGQMLDIAAETAEAPLTLEQITT 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q KTG L+ ++ +GA +A A LR + + LG+ FQ+ADD+LD E D
Sbjct: 172 LQARKTGCLIEWSACAGARLAGADP---APLRHYAQALGLAFQIADDILDIEGDAA 224
>gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2]
gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 308
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 101/250 (40%), Positives = 149/250 (59%), Gaps = 13/250 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L +L ++ + L L A + +RL++A+R+ AL GGK++R FLV
Sbjct: 1 MTFSLKDRLDASAAATEARLALALADAALPGERLRPERLMAAMRHGALGGGKRLRPFLVI 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A+LF + A+ AIECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE TAI+A
Sbjct: 61 ESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAMDDDDLRRGRPTVHRAFDEATAILA 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID------ 173
G+GLLT AF++++ +R L+ +L G+ GM+GGQMLD+ E
Sbjct: 121 GDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASGIGGMVGGQMLDLAAEGRFSGGTPL 180
Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E + +Q MKTGAL+ + E+GA++ A+ +E+ L +G LG FQ+ADD+LD
Sbjct: 181 ALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADERAALLAYGRALGAAFQIADDILDV 240
Query: 231 EE---DLPKK 237
E ++ KK
Sbjct: 241 EGTAEEVGKK 250
>gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 298
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N L + ++IDT L+++L + + L I Y+LL GGK+IR L
Sbjct: 3 NVELKQIFESKKEKIDTYLENILN------NDEIPEVLCQCIAYSLLNGGKRIRPVLCQI 56
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A ++ L + AAIE H SLIHDDLP MDN RRGK T H Y E A++AG
Sbjct: 57 TAEKLGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAG 116
Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
+ LL Y FE+ P+ + + +H IG G+ GGQ LDI E + +
Sbjct: 117 DSLLAYGFELCLQELPRLGFTQSNILNALKIFSHAIGPCGICGGQALDITQEGHEGEEEF 176
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ + ++KT L+ + + A + A + L +G +LGI FQ+ DD+LD +
Sbjct: 177 LWKMCELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILDVTGTISE 236
Query: 234 LPK 236
L K
Sbjct: 237 LGK 239
>gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl
Pyrophosphate Synthase Complex With An Isopentenyl
Pyrophosphate
Length = 323
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 26 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 80
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 81 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 140
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 141 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 200
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 201 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 260
Query: 236 KK 237
K+
Sbjct: 261 KR 262
>gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 333
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + ++ ++ + + + L+ A GGK++R L A++
Sbjct: 14 LARQFAPKMEAVNALIRARMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAAAI 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYEGDHDERLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ +D E + + K
Sbjct: 126 SRSFQLMVETGSLRVLDILANASATIAEGEVLQL------TASRDIATTEATYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T AL A E G ++A AS L +G+ LGI FQ+ADDLLD + D K
Sbjct: 180 TAALFSAATEVGGVIAGASDEVTGALYDYGDALGIAFQIADDLLDFQGDSAK 231
>gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088]
gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088]
gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTVTLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
43243]
gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
43243]
Length = 307
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ I+ I+ L + + + A+ Y++ GGK+IR +++E
Sbjct: 10 FKDMLNNKAEAINDIIKGFLPAEDT-----MSCEVEKAMNYSVMAGGKRIRPLIMSEAYK 64
Query: 64 LFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + A AA+E IH YSL+HDDLP+MDN RRG+ T H + E I+A
Sbjct: 65 LCGGSEECAAQVLHPFMAALEFIHTYSLVHDDLPAMDNDMYRRGQLTTHAAFGEDMGILA 124
Query: 120 GNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDE 174
G+ LL YA+E + + T + + G+ GM+GGQ + + ++
Sbjct: 125 GDALLNYAYETMLRAACDMTDTYRERSIRAASVIAGKAGIYGMVGGQTLDVKLTGMPMNA 184
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q+ I ++KTGAL+ A +GAI+A A +L G+ +G+ FQ+ DD+LD D
Sbjct: 185 GQLDYIFRLKTGALIEAAFMAGAILAGAPDEVTAKLEKAGDLVGVAFQIQDDILDVTGDA 244
Query: 235 P 235
Sbjct: 245 E 245
>gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N L+ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPLVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F+V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFDVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum]
Length = 320
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 15/236 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L ++Q + R++ L + + + L GGK++R V
Sbjct: 1 MSFQLFREIQADLARVEKELSNYMDTDHPTLTAASGHLLY-------AGGKRLRPAFVLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N + L + +E IH +L+HDD+ +D RRG PTV ++ ++ AG
Sbjct: 54 AGRFHNYSFERLLPLAVTMEMIHMATLVHDDV--IDESETRRGTPTVRARWGNRVSMHAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + +I+ + + ++ + + Q D +
Sbjct: 112 DHLFARSLLLIAEMNNPIIARVLAETSVEMCEGEIQQM------ATAFDVEQNFRDYLYR 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
K KT L+ +C+ GA+ A L+ +G +LG+ FQ+ DD+LD E D K
Sbjct: 166 IKRKTALLLSASCQLGAVAVDAPPYMIRALKWYGYHLGMAFQVTDDILDLEADEAK 221
>gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366]
gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366]
Length = 322
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 18 TILDDLLLQTASHMQ-TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L +++ ++ ++L + IRY + +GGK+IR L A LF + L A+
Sbjct: 5 AQLQEVIENAIQNINYPAQPEKLYAPIRYIMSMGGKRIRPVLTLMAADLFEADILKAIPA 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H ++L+HDD+ MDN +RRGK TVH ++ AI++G+ ++ A + +S
Sbjct: 65 ALAIETFHNFTLVHDDI--MDNAPLRRGKQTVHEKWGINNAILSGDVMMVEANKQLSMLH 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + + Q + M Q + + + ++KT L+ A +
Sbjct: 123 SAILKDALETFNATARGVCEGQQL---DMEFEQQAIVSIPEYINMIRLKTAVLLGGAMKL 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA +A A NE E+L FG NLGI FQL DD+LD D K
Sbjct: 180 GAQVAGADHNEAEQLYQFGLNLGIAFQLQDDILDVYGDPEK 220
>gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl
diphosphate synthase (SelF-HepPS) [Synechococcus
elongatus]
Length = 324
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 13/231 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
Q I+ + L + T+ L +RYAL GGK++R + A +
Sbjct: 3 QHYRDTIEQAIARALDR------TELPPILDEPVRYALASGGKRLRPLITLLAAEACGSS 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A V AA+E +H ++LIHDD+ MD +RRG+PTV+ +D+ TAI+AG+ ++ A+
Sbjct: 57 PADAAPVAAAVEILHNFTLIHDDI--MDRSPLRRGRPTVYRAWDDATAILAGDTMMGIAY 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++S S ++ + + + KT L
Sbjct: 115 RLLSEHYPAEVCQHLVAECSSAFVDVCIGQAEDLAFRT--MPSVTMDDYLRMIGRKTARL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPKK 237
A +G I+A A + LR +G LG+ FQ+ DD+LD + K+
Sbjct: 173 FATAAVAGGIVARAPHDVLAALRTYGTALGMAFQIRDDVLDLFGSPEFGKE 223
>gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
Length = 297
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 9/240 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L L ++ L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYSLSTDLTAIQQRINDFLATKLQAHQAY-----GSPLIDAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V+ AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILA 115
Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L ++AFE+I+ ++ + L+ + L +D+ ++ ++
Sbjct: 116 GDALQSFAFELIAQDESLTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAELE 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+I + KTGAL+ + G + SQN K+ L + + +G+ FQ+ DD+LD + K
Sbjct: 176 LIHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETDK 235
>gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 243
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + + ++ ++ L + + Q + ++SA GGK+IR LV A F N
Sbjct: 17 IASDMEAVNLVIRRQLHSEVALVN-QIAEYIISA------GGKRIRPALVLLMARAFGYN 69
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ + + AF
Sbjct: 70 GTHHHDLAAVVEFIHTATLLHDDV--VDESSLRRGRQTANALFGNAASVLVGDFVYSRAF 127
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ S I S + LQ + D + E + + + KT L
Sbjct: 128 QMMVSVDDMRVMRILSDATNVIAEGEVLQLLNM------HDPDVTEARYLQVIRSKTAKL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A + GA++A AS + E +G +LG FQL DD+LD D+ K
Sbjct: 182 FEAAAQLGALVAGASAEDVEAAAEYGRSLGTAFQLIDDVLDYSGNASDIGK 232
>gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
Length = 324
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
ID + L + + L I Y L LGGK++R L A +F + A+
Sbjct: 4 IDQYRESFLEELNKITTEKEPKNLYEPINYILQLGGKRLRPILALMTADVFETDFKKAIP 63
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+ ++
Sbjct: 64 AAMAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLIEAYRLLEQY 121
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + + Q + + + + + KT L+ A +
Sbjct: 122 DGEQYKKLNVLFSTTALQVCEGQQYDVDF---ETRDDVTIPEYLKMIEYKTAVLVAAAMK 178
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAI+A + ++ + FG+NLGI FQL DD LD D
Sbjct: 179 MGAIIAETTVENEDLIYDFGKNLGIAFQLQDDYLDAFGD 217
>gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 332
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L ++T++ + + + L+ A GGK++R L A L
Sbjct: 13 LAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F +R+ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 FGYGGDHHIRLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I + ++ LQ D DE + + K
Sbjct: 125 SRSFQLMVETGSLRVLDILANASATIAEGEVLQM------TAATDLRTDEAVYLQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A AS+ + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATEVGGVIAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSK 229
>gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1]
gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1]
Length = 304
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 93/240 (38%), Positives = 134/240 (55%), Gaps = 10/240 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
N L L+ ID++ D L + + RL+ A+RYA +GG K++R L+
Sbjct: 8 NDVLGDALKRVQGEIDSVFDAFLP-----VPHDTSARLVEAMRYAAMGGGKRVRPLLLVS 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L+ V+ AL AA+E IH YSLIHDDLP MD+ +R GKPTVH YD+ TA++AG
Sbjct: 63 TAELYGVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDDLRHGKPTVHKVYDDATAVLAG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L AFEI++ +T +RS+L+ +L G+ GM GGQM+D+ +
Sbjct: 123 DALHALAFEILADSQTSADPFVRSELIATLGKASGMGGMAGGQMMDMVADEEGVEYDLRT 182
Query: 181 QKM----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ + E GAI+ + + LR + ++G+ FQ+ADDLLD E D K
Sbjct: 183 ITRLQQLKTGALLAASVEMGAILGKVAPEGRAHLRAYSRDIGLAFQIADDLLDVEGDADK 242
>gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+ +R++ L L+ + L++A++Y ALLGGK++R FLV
Sbjct: 2 DFVQLQRAYHERVNQALTRLIDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E TAI+AG+
Sbjct: 57 EMLRAEAASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GQ L + + +D Q+
Sbjct: 117 LQTLAFTILADQPMPGVSPQDRIAMISELAQASGVAGMCCGQALDLAAEGKSVDLNQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A GA+ A A+ + +L + +G+ FQ+ DD+LD D
Sbjct: 177 IHRHKTGALIRAAVRLGALTAGAAGRDALPQLDIYANAIGLAFQVQDDILDVVGDTA 233
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 16/245 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
++++ +K I+ I++ L + H +T +L A+ Y++ GGK++R L+ E
Sbjct: 5 EQFKAEMERRTKEIEQIIEPYLPEETGHQKT-----VLEAMNYSMKAGGKRLRPMLMQEV 59
Query: 62 ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF + + AA+E IH SL+HDDLP MD+ +RRGKP+ +Y E ++ G
Sbjct: 60 CRLFTGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDE 174
+ L+ YAFE + D + + + G + + I
Sbjct: 120 DALMMYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPR 179
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
++ I ++KTGAL+ + GA++ A++ + + + ++G+ FQ+ DD+LD
Sbjct: 180 DKLDFIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSE 239
Query: 233 -DLPK 236
+L K
Sbjct: 240 AELGK 244
>gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073]
gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972]
gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073]
gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972]
gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972]
gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSINTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47]
Length = 315
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 17/248 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
N L + ++ L+ + +RL +A+RYA L GK++R L
Sbjct: 15 NESLKDYMDARRPAVEVALEAACED-----RPGVPERLAAAVRYAVLAPGKRLRPMLTIM 69
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + +A+ A+E IH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+AG
Sbjct: 70 AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----- 175
+ L + AF + + + L+ LD + +++
Sbjct: 130 DALQSMAFAHLHHSTSDATKSAALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADA 189
Query: 176 ---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ I KTGAL GAI A A N L + + G+ FQ+ DDLLDC
Sbjct: 190 ALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDCTS 249
Query: 233 -D--LPKK 237
D L K+
Sbjct: 250 TDEQLGKR 257
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L Q ++L ++ Y+L+ GGK+IR L
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNS-----PNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++++ T + + + G +GM+GGQ D +D+ I ++ ++
Sbjct: 117 LTYAFQLMT-SNTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL + E G I+ A++ + L + LG++FQ+ DD+LD +L K
Sbjct: 176 TGKTGALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233
>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
Length = 293
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + ++ I+ L S+ N ++ A+ Y+L GGK+IR L+
Sbjct: 1 MEKEI--SIEHLRNSIENWLGSYFKDKGSY-----NKKVYEAMEYSLGAGGKRIRPLLLL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L+ + L + +A+E IH YSLIHDDLP MDN +RRGKPT H + E A++A
Sbjct: 54 LTYMLYKDDFEKVLPIASAVEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAVAVLA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+GLL I+ + + + + + G +GM+GGQ +D ++ I Q+
Sbjct: 114 GDGLLNEGMSIMLKSC-MNEQHNFIKACSFIAESAGAEGMVGGQTVDILSENTKIPIDQL 172
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+ + KTGA++ + +GAI+ A + + E L +G+ LG+ FQ+ DD+LD D L
Sbjct: 173 YYMHSKKTGAIIKASIIAGAILGEAPKRDIENLEYYGQKLGLAFQIKDDILDIVGDTEVL 232
Query: 235 PKK 237
KK
Sbjct: 233 GKK 235
>gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
XB6B4]
Length = 296
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ +++ ++ + I+ L + + +T ++ A+ Y+ L GGK++R L+ E
Sbjct: 2 DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRGK T H+ Y E AI+AG+
Sbjct: 57 RLFGGRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
LLTYAFE + N +++ + G+ G + + + ++
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I ++KT AL+ + GA++A A+ +E++ + +G+ FQ+ DD+LD
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230
>gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 291
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 12 NSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
S D + + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 2 RSALFDHWIARTERSLEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAA 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AF
Sbjct: 62 EDQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAF 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++++ + + L+ +D + + + +KTGAL
Sbjct: 122 ELLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGAL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 182 IRASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
Length = 290
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ ID L++ + + +T + ++ Y+L +GGK+IR L SLF
Sbjct: 5 KYKDSIDKWLENYFISKDGYEKT-----IYDSMSYSLNIGGKRIRPLLFLYTYSLFKDEI 59
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + AIE IH YSLIHDDLP+MD+ +RRG PT HI+Y + AI+AG+GLL A
Sbjct: 60 DDVLDIAGAIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMN 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGA 187
I+ + + + + ++ + G GM+ GQ ++ + + I ++ + KTGA
Sbjct: 120 IMFQYCIESESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ A S AI+A A E E+L +G LG+ FQ+ DD+LD D K
Sbjct: 180 LINAAIVSAAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESK 228
>gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
Length = 287
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 13/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + L + +I +D L Q D L A+ YAL GGK +R FLV E
Sbjct: 1 MTAGFTAALLQAQTQILNHMDRRLPQ---------ADLLHQAMDYALRGGKMLRGFLVLE 51
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L +V A+ AIECIH YSL+HDDLP+MD+ +RRG+PT+H ++DE TA++AG
Sbjct: 52 SARLHDVPETAAIEAALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLHRKWDEATAVLAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFM 179
+ L T AFE+++ + + G+ G + + + + ++
Sbjct: 112 DSLQTLAFELLARDSVGPNALSLIRTLAQAAGKDGMVSGQMMDIAAETAETPLTLDEITT 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q KTG L+ ++ +GA +A A LR + + LG+ FQ+ADD+LD E D
Sbjct: 172 LQARKTGCLIEWSACAGARLAGADP---APLRHYAQALGLAFQIADDILDVEGDAA 224
>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Herbaspirillum seropedicae SmR1]
Length = 311
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 124/242 (51%), Gaps = 16/242 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ + ++ +L+ L + RL A+RY A+ GGK++R LV
Sbjct: 12 FAQWMGQVQSGMEEVLNRFLPS-----ASVVPARLHEAMRYTAMDGGKRVRPLLVYAAGE 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF+ R AA+E IH YSL+HDD+P MD+ +RRGKPTVHI+YDE TA++ G+ L
Sbjct: 67 LFDTPRALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDAL 126
Query: 124 LTYAFEIISSPKTQLKDN-------IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET- 175
AF+ +++P + + +++ L G GM GGQ +D+ + +
Sbjct: 127 QAQAFDTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSL 186
Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + ++KTGAL+ A GA+ A + E L + +G+ FQ+ DD+LD D
Sbjct: 187 AELEQMHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATAD 246
Query: 234 LP 235
Sbjct: 247 SA 248
>gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
Length = 300
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN L ++ + +R++ LD L + +RL A+RY++LGG K++R L
Sbjct: 1 MNPERSLSDFMRSSQERVERALDARLPAAD-----RMPERLHQAMRYSVLGGGKRMRPLL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A+E IH YSLIHDDLP+MD+ +RRGKPT H YDE TAI
Sbjct: 56 TYATGQTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+AG+GL AF +++ + R ++ +L G GM+GGQ +D+
Sbjct: 116 LAGDGLQALAFHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDL 175
Query: 177 V--FMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTGAL+ + A +A + +RL + + +G+ FQ+ DD+LD E
Sbjct: 176 PGLENMHIRKTGALIRASVRL-ACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEES 234
Query: 233 D---LPK 236
D L K
Sbjct: 235 DTQTLGK 241
>gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
Length = 306
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 10/240 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ +L +R D L D + ++ L++++R+ ALLGGK++R FLV
Sbjct: 7 SAAFADQLLAFRQRTDRTLLDFIAPL-----PFNDGDLVASMRHGALLGGKRLRPFLVYT 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F + AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG
Sbjct: 62 TGQMFGIAQNNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121
Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQV 177
+ L + AF I++ + R ++ L G+ GM GGQ +D+ E +
Sbjct: 122 DALQSLAFSILADAEMPDVALRDRLAMVSELAAASGVAGMCGGQSMDLDAEGKQIGLAAL 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A GA+ A +S + L + +G+ FQ+ DD+LD + K
Sbjct: 182 EQIHRHKTGALIRAAIRLGALAAGSSGRAALPLLDRYAAAIGLAFQVQDDILDVIGETEK 241
>gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973]
gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973]
Length = 324
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D ILD + L I+Y L +GGK+IR L+ +L+ + + L
Sbjct: 5 DAILDMFNRYLEGQNYDRSPKSLYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILST 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H Y+L+HDDL MD+ +RRG+ TVH ++ TAI++G+ +L A+E ++ +
Sbjct: 65 ACAIETYHNYTLLHDDL--MDHADVRRGRATVHKRWGANTAILSGDSMLVLAYERLARCR 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+I + Q M Q + + E + + ++KT L+ A +
Sbjct: 123 ADKLKDILDLFTETALEIGEGQ---EFDMSFEQRDDVKEEEYIEMIRLKTSVLLACAMKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAI+A A + E L FGE +G+ FQL DD LD D
Sbjct: 180 GAILADAPPADAENLYKFGEQIGLAFQLQDDFLDVYGD 217
>gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
43183]
gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
43183]
Length = 324
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + A + L + Y L +GGK+IR L+ +L+ +
Sbjct: 6 ELLDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPA 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M + + + ++KT L+ + + G
Sbjct: 124 EHLKAVMDLFSLTALEICEGQQMDMDFEQRSDVKE---EEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + ERL FG N+G+ FQL DDLLD D
Sbjct: 181 ALLGGASAEDAERLYDFGMNMGVAFQLKDDLLDVYGDTA 219
>gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A]
gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS]
gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22]
gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019]
gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171]
gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1]
gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989]
gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W]
gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS]
gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A]
gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22]
gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019]
gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171]
gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989]
gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1]
gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W]
gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W]
gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14]
gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010]
gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180]
gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11]
gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120]
gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167]
gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA271]
gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H591]
gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272]
gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032]
gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++R ++ L + L+ A+ Y LLGGK++R FLV
Sbjct: 2 DFSQQLQSQAERANSALQHFIGAL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F VN AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E +AI+AG+
Sbjct: 57 EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P + R ++ L G+ GM GGQ L+ + + +D +
Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A ++ L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1]
gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1]
Length = 293
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L S +QE R+DT L +L +A++Y ALLGGK+IR FLV
Sbjct: 2 LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I +A +++ + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD+ E
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLNALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 297
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/241 (35%), Positives = 137/241 (56%), Gaps = 11/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ L + L +RI+ L T ++ L+ A+ YA LLGGK++R FL+
Sbjct: 1 MSYSLSTDLSVIQQRINDFL-----STKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V AA+E IH YSL+HDDLP+MD+ +RRGKPT HI +DE TAI+A
Sbjct: 56 ATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
G+ L ++AFE+I ++ + + + + SLT G +GM GQ LD +D+ ++ ++
Sbjct: 116 GDALQSFAFELIVQDESLTD-SQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I + KTGAL+ + G ++ SQN K+ L + + +G+ FQ+ DD+LD +
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Thiomonas sp. 3As]
Length = 326
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 16/246 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+N L ++ R +++ + + +L A+ YA GGK++R LV
Sbjct: 24 LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ R A+E +H YSL+HDDLP MD+ +RRG+PT H+++ E A++A
Sbjct: 79 AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVRFGEALALLA 138
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L A+E+++ P+ + ++++L L G GM GGQ + + +
Sbjct: 139 GDALQALAYEVLT-PEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 197
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KTGAL+ + GA L +G+ +G+ FQ+ DD+LD D
Sbjct: 198 MHMHSRKTGALLKASVLMGAACGGFDTAHPAQTYTALETYGDAVGLAFQVVDDILDVTAD 257
Query: 234 ---LPK 236
L K
Sbjct: 258 SHTLGK 263
>gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+ +R+D L+ L + + +RL A+RY+++ GGK++R LV N
Sbjct: 5 YQKGCQQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALN 59
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 60 GDKTDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSL 119
Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKM 183
AFE ++ +R ++ L G GM+GGQ +D+ + + ++ +
Sbjct: 120 AFEAMAQAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRH 179
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + + GA+ + A + L + +G+ FQ+ DD+LD E D
Sbjct: 180 KTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232
>gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101]
gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101]
gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M605]
gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA206]
gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H299]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710]
gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304]
gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579]
gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149]
gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33]
Length = 298
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA+L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
Length = 332
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++T++ + + + L+ A GGK++R L A L
Sbjct: 13 LAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + ++ + + + K
Sbjct: 125 ARSFQLMVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEEIY------LQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A ++G ++A+A + + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229
>gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a]
gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161]
gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
Length = 293
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERN------IEPRLKESMLYSIQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AF I++ R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDDNL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ +A S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
Length = 293
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/243 (35%), Positives = 129/243 (53%), Gaps = 19/243 (7%)
Query: 1 MNGGLP------SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR 54
MN +P S L+ + I L++ L D L A+RYAL GGK +R
Sbjct: 1 MNAEIPQMQGFASALKASQSMISAHLENRLA---------GEDNLHQAMRYALKGGKMLR 51
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
FLV E A L V+ AL AIEC+H YSL HDDLP MD+ +RRG+PT+H ++DE
Sbjct: 52 GFLVLESARLHGVSQKVALDAALAIECLHAYSLAHDDLPCMDDDDLRRGQPTLHRKWDEA 111
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFID 173
A++AG+ L +AFE++S+P + + G+ G + + + +
Sbjct: 112 MAVLAGDSLQCFAFELLSNPDMGPNALSLIRDLAKSAGKDGMVSGQMLDIAAETAETPLT 171
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
Q+ ++Q KTG L+ ++ +GA++A A LR + LG+ FQ+ADD+LD E D
Sbjct: 172 LEQISLLQARKTGCLIEWSASAGAVLAGADS---TPLRQYATALGLAFQIADDILDVEGD 228
Query: 234 LPK 236
+ K
Sbjct: 229 VQK 231
>gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227]
gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227]
gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
Length = 324
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE K ++ LD L + + L I Y L LGGK+IR L+ +L+ +
Sbjct: 5 QEILKLVNNHLDSLADE-------RQPRHLYEPIEYVLSLGGKRIRPTLMLLAYNLYREH 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L IE H Y+L+HDDL MD +RRG TVH ++D TAI++G+ +L A+
Sbjct: 58 PEDILMPACGIETYHNYTLLHDDL--MDQADLRRGHETVHKRWDANTAILSGDSMLVLAY 115
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + + Q M + E + + ++KT L
Sbjct: 116 QRMAQCRPDKLKEVIDLFTQTALEIGEGQ---QYDMDFEHRNDVTEDEYIEMIRLKTSVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A + GAI+ AS + L FGE +G+ FQL DD LD D
Sbjct: 173 LACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDDFLDVYGDSK 219
>gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12]
gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12]
Length = 324
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 16/246 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+N L ++ R +++ + + +L A+ YA GGK++R LV
Sbjct: 22 LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 76
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ R A+E +H YSL+HDDLP MD+ +RRG+PT H+Q+ E A++A
Sbjct: 77 AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVQFGEALALLA 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L A+E+++ P+ + ++++L L G GM GGQ + + +
Sbjct: 137 GDALQALAYEVLT-PEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 195
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KTGAL+ + GA L +G+ +G+ FQ+ DD+LD D
Sbjct: 196 MHMHSRKTGALLKASVLMGAACGGFDTARPAQTYTALETYGDAVGLAFQVVDDILDVTAD 255
Query: 234 ---LPK 236
L K
Sbjct: 256 SHTLGK 261
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-A 62
+ +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+ A
Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTS------DQRLFESMQYSIQAGGKRIRPLLLVATVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+G
Sbjct: 55 AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF++++ + + + LS + +++ + ++ I +
Sbjct: 115 LLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSIHE 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD +L K
Sbjct: 175 RKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231
>gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 12/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ L L + +R++ L + Q + L++A+ Y ALLGGK++R FLV
Sbjct: 1 MDFNL--LLTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+A
Sbjct: 54 ATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILA 113
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ P + R ++ L G+ GM GGQ L + + + +
Sbjct: 114 GDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNE 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A GA+ A + L F +G+ FQ+ DD+LD D
Sbjct: 174 LEQIHRHKTGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233
>gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012]
gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74]
gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio sinaloensis DSM 21326]
gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio sinaloensis DSM 21326]
Length = 294
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+ +++ L+ L L+ A+RY LLGGK+ R FLV
Sbjct: 1 MQEALTSLQQRNNAQLEAWLNTL---------PHQQQPLIEAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R +++ +L G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILADGHLNPDAQAQRIKMVKALAEASGAAGMCMGQALDLAAENRDVSLQE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIISDTE 231
>gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanothermus fervidus DSM 2088]
gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanothermus fervidus DSM 2088]
Length = 322
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L++ SK I+ + + + + L+ A GGK+IR LV
Sbjct: 3 YLEKYSKLIEEEIRKNISDIEPTELYKSSAHLIEA------GGKRIRPSLVLLSTESVGG 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AIE IH +SLIHDD+ MD +RRG+ TVH+ + E AI+AG+ L + A
Sbjct: 57 KIEDALNAATAIELIHTFSLIHDDI--MDKDEVRRGRATVHVIWGEPLAILAGDVLFSKA 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ K ++ +++ +G + + E + + + KT +
Sbjct: 115 FEVMLKSNIDEKRLVKVLDVMTKACVNLCKGQAYDMLFEKNFEVKE-KEYLEMIYYKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + + GAI+ + S+ E L +G+ LG+ FQ+ DD LD D
Sbjct: 174 LIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQIHDDYLDIAGDEK 221
>gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 306
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
N + +RI+ +L+ LL RL A+RY+ LGG K++R LV
Sbjct: 9 NETFAQFRSRSVRRIEDVLETLLP-----PAHLLPARLHDAMRYSTLGGGKRVRPLLVYA 63
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ V R AA+E IH YSL+HDDLP+MDN +RRG PT H YDE TAI+ G
Sbjct: 64 AGACLGVPLELLDRPAAALEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVG 123
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
+GL AF +++ P + + Q++ SL G +GM+GGQ +D+ + +
Sbjct: 124 DGLQAQAFLVLAEPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLAAVGHELALPALE 183
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KTG LM A + A E L + + +G+ FQ+ DD+LD DL
Sbjct: 184 QMHLHKTGMLMRCAIQLALCAAGIDAQEARGAALLRYADRVGLAFQVQDDILDEIGDL 241
>gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301]
gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 301]
gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
flexneri 2a str. 2457T]
gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017]
gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70]
gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71]
gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671]
gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71]
gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218]
gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149]
gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149]
Length = 289
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 84/235 (35%), Positives = 131/235 (55%), Gaps = 14/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L+ + D +L + ++ A+ +A GGK++R FLV E A L
Sbjct: 2 FSQRLEAAGAAVQAHFDKVLAEFE-------PLPIVEAMAHATSGGKRLRGFLVLETARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ AIE +H YSL+HDDLP MD+ +RRG+PTVH ++D+ TA++AG+ L
Sbjct: 55 HDIAAGEAIWSATAIEALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
T AFE+++ P +R+ L LSL G QGM+ GQ LDI E ++ +
Sbjct: 115 TLAFELVTHPGASPSAEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDEITRL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ KTGAL+ ++ ++GA +A A L+ + + LG+ FQ+ADD+LD D
Sbjct: 175 QQGKTGALIGWSAQAGARLAQADT---AALKRYAQALGLAFQIADDILDVTGDSA 226
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+ +R+D L+ L + + +RL A+RY+++ GGK++R LV N
Sbjct: 5 YQKGCQQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALN 59
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL +
Sbjct: 60 GDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSL 119
Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKM 183
AFE ++ +R ++ L G GM+GGQ +D+ + + ++ +
Sbjct: 120 AFEAMAQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRH 179
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + + GA+ + A + L + +G+ FQ+ DD+LD E D
Sbjct: 180 KTGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232
>gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 125/240 (52%), Gaps = 12/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ L L + +R++ L + Q + L++A+ Y ALLGGK++R FLV
Sbjct: 1 MDFNL--LLISHYQRVNAALQGFISQL-----PFQSSPLVNAMEYGALLGGKRLRPFLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E +AI+A
Sbjct: 54 ATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEESAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ L G+ GM GGQ L + + + +
Sbjct: 114 GDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMCGGQALDLAAEGKKVTLNE 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A GA+ A S + L F +G+ FQ+ DD+LD D
Sbjct: 174 LEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 13/248 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALL-GGKKIRSFLVT 59
+ S + +K I+ LDD + + + + A+RY LL GGK++R L
Sbjct: 30 DSEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCL 89
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E TAI+A
Sbjct: 90 VACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILA 149
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-------MLDIQDEF 171
N L++ + ++S + + + + +G++G++ GQ + + E
Sbjct: 150 ANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETED 209
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD
Sbjct: 210 EGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 269
Query: 232 ---EDLPK 236
E+L K
Sbjct: 270 KSSEELGK 277
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L Q ++L ++ Y+L+ GGK+IR L
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNS-----PNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++++ T + + + G +GM+GGQ D +D+ I ++ ++
Sbjct: 117 LTYAFQLMT-SNTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K
Sbjct: 176 TGKTGALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233
>gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168]
gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168]
Length = 299
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++ + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTRQLQVCVEQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 KMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ LD + + +
Sbjct: 117 LQTLAFTIISDAPMPEVTDRDRIAMISELANASGIAGMCGGQALDLDAEGRQVPLAALEK 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNVLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361]
gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361]
Length = 325
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 10/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D IL + + L ++Y L +GGK+IR L+ +L+ + + L
Sbjct: 6 DEILQKINSFIEQLPYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDDPESILMQ 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MDN +RRG TVH +++ A+++G+ + +++ +
Sbjct: 66 AVGLETYHNYTLLHDDL--MDNADLRRGHETVHKKWNANQAVLSGD-----SMLVLAYQR 118
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
+ + +L L L+ G Q + D ++ + ++KT L+ A
Sbjct: 119 MMDCPVDKLEKVLGLFTETALEIGEGQQYDIDFEMRNDVSEDEYIEMIRLKTSVLLACAL 178
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GAI+A AS ++ ++L FGE +G+ FQL DD LD D
Sbjct: 179 KIGAILAGASPSDADKLYKFGEKMGLAFQLQDDYLDVYGDEK 220
>gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301]
gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301]
Length = 304
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 13/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ RI+ +L++ L T RL SA+RY+ L GGK++R+ L +
Sbjct: 14 DFSAWAAAKQARIEDVLNNALPST-----NVAPQRLHSAMRYSALEGGKRVRALLCYAAS 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A A+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+
Sbjct: 69 ELCKTDAKVADAAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 128
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AFE++S + N + ++ L G GM GGQ +D + + +T + +
Sbjct: 129 LQSLAFEVLSQANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQM 188
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++KTGAL+ A G I + + + + +N+G+ FQ+ DD+LD E D L K
Sbjct: 189 HQLKTGALIQAAVLLGGI--NGEIEKTAAISTYAKNIGLAFQVIDDILDVEADSSTLGK 245
>gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas tunicata D2]
gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas tunicata D2]
Length = 296
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 139/237 (58%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + EN R++ +LD LL Q + LL+A RY+LL GGK++R +V
Sbjct: 2 TIKKLIVENQLRVEGVLDTLLTQ-----PMITDQTLLAASRYSLLNGGKRMRPCMVYVTG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F N V AAIECIH YSL+HDDLP+MD+ +RRG PT HI YDE TAI+AG+
Sbjct: 57 EIFGANPDDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T+AFEI+SS + + L+ +L GL+GM GGQ + + I+ TQ+
Sbjct: 117 LQTFAFEILSSSKFKTINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A GAI A + + L+ FGEN+G+ FQ+ DD+LD E D
Sbjct: 177 IHQLKTGALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGDTA 233
>gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3]
gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3]
Length = 293
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L L +RI+ +L + + +L +A+++ AL+GGK+IR FLV
Sbjct: 2 LAESLVTYQQRINQLLATRIDALD-----DIDPKLKAAMKHGALIGGKRIRPFLVYAIGE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ NV T AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI YDE TAI+AG+ L
Sbjct: 57 MLNVKLETLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAYDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--Q 181
AFEIIS P + + ++ +L + G GM GGQ +D+ +I
Sbjct: 117 QALAFEIISEPIKNIAPSQNLAMVKALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
K+KTGAL+ A E I A + +E++ L F + +G+ FQ+ DD+LD E+L K
Sbjct: 177 KLKTGALIRCAVEFAIIAAKINDDERQALVDFADAIGLAFQVQDDVLDIIASTEELGK 234
>gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
Length = 332
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++T++ + + + L+ A GGK++R L A L
Sbjct: 13 LAATLSDEMAAVNTLIQTRMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + + + + + K
Sbjct: 125 ARSFQLMVETGSLRVLDILANASATIAEGEVLQMTAASDLATDEGIY------LQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A ++G ++A+A + + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229
>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 8/220 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
I+ L +++ + + + A+ Y+LL GGK++R L A + + +
Sbjct: 14 IEERLQNIIPEVNEYCLD-----IKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVIN 68
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
G AIE IH YSLIHDDLP+MDN RRGKPT H + E AI+AG+GLL A+EI+ +
Sbjct: 69 FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMIND 128
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192
+ K + + + G GM+GGQ++D+Q + I+ ++ + ++KTGAL+
Sbjct: 129 AVESKSIDKMRAAGIVAKYAGSLGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAP 188
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E+ A++ A + E E L + NLG+ FQ+ DD+LD E
Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228
>gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
Length = 324
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + A T+ L + Y L LGGK+IR L+ +L+ + +
Sbjct: 6 QLLDKINKYIADIQFTRTPKGLYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AAIE H ++L+HDDL MD +RRGKPTVH +++ TA+++G+ +L AF +++
Sbjct: 66 AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPA 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L++ Q + M + E + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDLFSLTMLEICEGQQL---DMEFESRGDVTEDEYIEMIRLKTAVLLAGSLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
AI+A A+ + E L FG +G+ FQL DDLLD D KK
Sbjct: 181 AILAGATAEDAENLYKFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224
>gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 322
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++ +D ++ L + ++ + S GGK++R LV A
Sbjct: 4 ESIRNVIAKDMGEVDNVIQQKLHSQVALVRQVSEYIIHS-------GGKRLRPALVILAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ L + A +E IH +L+HDD+ +D +RR + T + + +++ G+
Sbjct: 57 GLFDYKGLHHHNLAAVVEFIHTATLLHDDV--VDESELRRNQATANALFGNAASVLVGDF 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ + + ++ LQ + ++ + + +
Sbjct: 115 LYSRAFQMMVEVGNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENY------LQVIR 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A GAI+ A+ E+E L +G +LG FQL DDLLD D K
Sbjct: 169 FKTAKLFEAAARLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGK 225
>gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110]
gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638]
gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A]
gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11]
gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952]
gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9]
gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B]
gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185]
gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50]
gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736]
gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9]
gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Risedronate
gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli]
gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli]
gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046]
gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197]
gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110]
gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5]
gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638]
gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A]
gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1]
gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11]
gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39]
gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026]
gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952]
gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
[Escherichia coli BL21(DE3)]
gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606]
gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1]
gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042]
gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412]
gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185]
gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302]
gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617]
gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407]
gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70]
gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1]
gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B]
gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G]
gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68]
gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482]
gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489]
gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007]
gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli H736]
gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli M718]
gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA143]
gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Escherichia coli TA280]
gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9]
gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQTLAFAILSDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Cupriavidus taiwanensis LMG 19424]
Length = 294
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
+Q R + L L L A+RYA L GGK++R LV
Sbjct: 2 SDFAQWMQAQGARTEAALQAALPD-----AGTVPHTLHEAMRYAALSGGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ + +R QL+ L G GM GGQ +D+Q+ T+
Sbjct: 117 ALQTQAFIVLAGAEPI-APAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEA 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ L + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASVRMGALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTADTA 231
>gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354]
gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPKVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 332
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ + + + L+ A GGK++R L A L
Sbjct: 13 LAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + + + + + K
Sbjct: 125 ARSFQLMVETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVY------LQVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 179 TAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAK 229
>gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. AM4]
gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. AM4]
Length = 343
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFL 57
M L ++++ +K +D I+ +L+ + + +L A R Y L GGK++R F+
Sbjct: 1 MTDYKELFTRIKNLAKDVDKIILELVPE-------KDPKKLYEAARHYPLAGGKRVRPFV 53
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI
Sbjct: 54 VLRAAEAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGVNMAI 111
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L + AFE I+ + + R +L T N +G + +DE +
Sbjct: 112 LAGDLLFSKAFEAIAKAEVSPEKKARILEVLVKTSNELCEGQALDIEFETKDEVTV-DEY 170
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL + GAI+ ++ L +G N+GI FQ+ DD+LD D K
Sbjct: 171 LKMISGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEK 229
>gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
Thiolodiphosphate
Length = 300
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 3 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 58 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 117
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 118 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 177
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 178 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 237
Query: 236 KK 237
K+
Sbjct: 238 KR 239
>gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933]
gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024]
gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966]
gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
coli O157:H7 str. EDL933]
gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli]
gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli]
gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli]
gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli]
gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli]
gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 5/220 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
T LD + ++ + L A+RY +L GGK++R LV A + + ALR
Sbjct: 12 TALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH YSLIHDD+P MDN +RRGKPTVH+QY E A++AG+ + AFE+++ T
Sbjct: 72 CAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDT 131
Query: 137 QL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKMKTGALMCFA 192
++++L L G+ GM GGQ +D+ + + KTGAL+ +
Sbjct: 132 DDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQAS 191
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA + + + L +G +G+ FQ+ DD+LD +
Sbjct: 192 VLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQ 231
>gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5]
gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5]
Length = 296
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
Q + I+ IL L + ++ A+ YAL GGK++R L+ E
Sbjct: 2 NFKETYQTKVEAIERILKAYLPAGEGY-----QTVIMEAMEYALMAGGKRLRPMLMQETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+
Sbjct: 57 RLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVMYGEDIGILTGDA 116
Query: 123 LLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
LL AFE + + + + L G+ GM+GGQ + + I ++
Sbjct: 117 LLNCAFETAAKAFDMEPEKSLQTGKALQILAGKAGIYGMIGGQVVDVKSTGDQISGEKLN 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I K+KTGAL+ + GA++A A++ + + +G+ FQ+ DD+LD +L
Sbjct: 177 FIYKLKTGALIEASMMIGAVLAGAAREQVNAVEEIAGKVGLAFQIQDDILDVTSTAEELG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302]
gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302]
Length = 323
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + + + L ++Y L +GGK+IR L+ LF + + L
Sbjct: 4 EELLVKVNDFLDNLKYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++
Sbjct: 64 ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + T +G + +++ + + + ++KT L+ A +
Sbjct: 122 PVYLSD--VLHTFTETALEIGEGQQYDMEFETRNDVTE-DEYIEMIRLKTSVLLACAQKI 178
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK
Sbjct: 179 GAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223
>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 297
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YA L GGK++R FL+
Sbjct: 1 MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N N ++ A+E IH YSL+HDDLP++DN RRGK T H + E I+
Sbjct: 54 ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
G+ LLTYAF ++S +L + + ++S T + G + + +
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I KTG L+ E I+A +++++ L + + +G+ FQ+ DD+LD E +
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEE 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD+ E
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLNALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 296
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 11/228 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALR 74
++ + LL + R+ A+RY+ L GGK++R FL + ASLFNV+ ALR
Sbjct: 16 VNDEMAHLLP-----VPDGPERRVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALR 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
VG A+E +HCYSLIHDDLP MD+ +RRG+PT H Q+DE TA++AG+ L + AFE++++
Sbjct: 71 VGCALEMVHCYSLIHDDLPCMDDDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAE 130
Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T L+ L +D + +Q+MKTG L+ FA
Sbjct: 131 STHPDPAVRCELVWQLAHAAGGMGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFA 190
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
CE+GAI+ A + + L+ + +LG+ FQ+ADDLLD + D KK
Sbjct: 191 CEAGAILGKAPSSLRLALKNYAHDLGLAFQIADDLLDVQGDEMQVGKK 238
>gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
Length = 303
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R + L+ L +T RL +A+RYA LG GK++R L
Sbjct: 2 SDFAQWMASVVARTEVALERALPA-----ETVSPQRLHAAMRYATLGAGKRVRPLLAHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGDASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
L T AF +++ + L G QGM GGQ +D+Q I + ++
Sbjct: 117 ALQTQAFIVLAEQGAVRPATRAVLMG-ELARASGSQGMAGGQAIDLQSVGIALSQDELEA 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E + + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
Length = 292
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 10/237 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + + +R+D L+ L + S ++L +A+R+ +L GGK++R L+
Sbjct: 1 MN--IERLMAADRRRVDECLETLFARGESAPS----EQLDAAMRHGVLVGGKRLRPVLLY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A+E +H YSL+HDDLP+MD+ +RRG+PTVH YDE TAI+A
Sbjct: 55 ATGRALGASDEALDGPAMAVELVHAYSLVHDDLPAMDDDDVRRGRPTVHRAYDEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AFE+++ + L + + G +
Sbjct: 115 GDALQTLAFEVLADTGHPRLAAMVGTLARAAGRDGMAAGQALDLDAVGGHPDLTALAT-- 172
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ A G ++A L + +G+ FQ+ DD+LD D
Sbjct: 173 MHRHKTGALIHAAVRLGGLVAVPEDDERLLALERYAAAIGLAFQIRDDVLDVTGDTA 229
>gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536]
gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11]
gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536]
gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11]
gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1]
Length = 299
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355]
Length = 298
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G
Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF++++ + L + + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLA-RPSGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319]
gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319]
Length = 324
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D IL + + + L I+Y L LGGK+IR L+ +LF + + L
Sbjct: 5 DEILYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MD+ +RRG+ TVH+++D TAI++G+ +L AF+ ++
Sbjct: 65 ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCS 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + Q M + E + + ++KT L+ A +
Sbjct: 123 DKYLREVLKLFTTTALEIGEGQQ---YDMEFETRNDVKEEEYIEMIRLKTSVLLACAMKI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GA++A A + + E L FGE +G+ FQL DD LD D KK
Sbjct: 180 GALLADAPEEDAESLYKFGEQVGLAFQLQDDYLDVYGDPKVFGKK 224
>gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4]
gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4]
Length = 293
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 127/238 (53%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + +R+D L + +L +A+ + AL+GGK+IR FLV
Sbjct: 2 LNEAITRYQQRVDGQLRHFINAQD-----DTEPQLKAAMEHGALIGGKRIRPFLVYAVGE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI ++E TAI+AG+ L
Sbjct: 57 MLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
T AFEIIS +L + + ++ +L G GM GGQ +D+ + +
Sbjct: 117 QTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++KTGAL+ A E I A + + L F + +G+ FQ+ DD+LD E+L K
Sbjct: 177 RLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGK 234
>gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118]
Length = 291
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + T RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERSLEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLATASASAELRVSWMQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGCAAAADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894]
gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++R + L + + L+ A+ Y LLGGK++R FLV
Sbjct: 2 DFSQQLQAQAERANRALQHFIGEL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F VN AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E +AI+AG+
Sbjct: 57 EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S P + R ++ L G+ GM GGQ L+ + + +D +
Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A ++ L + +++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYADSIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863]
gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+EC+H YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECVHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91]
gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91]
Length = 322
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++ +D ++ L ++ + S GGK++R LV A
Sbjct: 4 ESIRNVIAKDMGEVDNVIQQKLHSQVVLVRQVSEYIIHS-------GGKRLRPALVILAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L++ + A +E IH +L+HDD+ +D +RR + T + + +++ G+
Sbjct: 57 GLYDYKGTHHYNLAAVVEFIHTATLLHDDV--VDESQLRRNQATANALFGNAASVLVGDF 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ + + ++ LQ + ++ + + +
Sbjct: 115 LYSRAFQMMVEVDNMRVMEVLADATNTIAEGEVLQLLNCRDPDVEEENY------LQVIR 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A GAI+ A+ E+E L +G +LG FQL DDLLD D K
Sbjct: 169 FKTAKLFEAAGRLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGK 225
>gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 301
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 6/233 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+ ++ E + + LD+LL + RL A+RYA LG GK++R + E +
Sbjct: 11 SVADRVAEVADMVTVALDELLPRADGP-----EVRLTEAMRYAALGPGKRLRPYFAMEAS 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF++ LR A+EC+H YSL+HDDLP MD+ +RRG+PT+H YDE TA++AG+
Sbjct: 66 RLFDIEERPVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTLHRAYDEATAVLAGDA 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T AF+I+ T NIR L L+ G +GM GGQM+D+ D V +Q+
Sbjct: 126 LQTAAFDILLHEDTHEDANIRCALAARLSLASGARGMAGGQMVDLLGVRDDLEGVARMQR 185
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL +A E I+A A++ + L F ++G+ +Q+ DDLLD + D
Sbjct: 186 LKTGALFTYAFEIPLIVARANERHCQALTDFAHDIGLAYQIVDDLLDFDGDEA 238
>gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
Length = 300
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 129/245 (52%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L+ + +++D L+ L A+ L+ A+R+ ALLGGK++R FLV
Sbjct: 1 MT-DFARALENSRQQVDAALERYLSVLANPQAP-----LIQAMRHGALLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ LF + + AAIECIH YSLIHDDLP+MDN +RRG PT H+++ E TAI+A
Sbjct: 55 QTGRLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDNDALRRGLPTCHVKFGETTAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ ++ R Q++ +L G GM GQ L+ + + + +
Sbjct: 115 GDALQTLAFSILADVEMPKVSPQDRLQMISALAAASGADGMCLGQALDLEAEGQQVSAAR 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A G + A L F +G+ FQ+ DD+LD D
Sbjct: 175 LETIHRHKTGALIRSAVRMGVLAAGERGGPALRYLDRFAAAIGLAFQVQDDILDVVGDSQ 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Neisseria meningitidis 8013]
gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902]
Length = 298
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HIQYDE TA++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIQYDEATALLVG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
Length = 299
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +L + ++ L + + LL+A+ Y+LL GGK++R L A
Sbjct: 2 TVKERLAVMAGEVEVYLRERFGARMRE--RGVPENLLAAMEYSLLAGGKRLRPVLCLVFA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ + + A E IH YSLIHDDLP+MD+ +RRG+P+ H + E AI+AG+
Sbjct: 60 ELFDADRARVMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDA 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF + + + + G GM+GGQ+LD+ + + + +
Sbjct: 120 LLTEAFGCMGRVWPGVAAELVLPALAEAAKAAGAAGMVGGQVLDMDYTAREGVTLAELAR 179
Query: 183 MKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M+ +C GAI+A A + R R +GE +G FQ+ DD+LD D L K
Sbjct: 180 MQALKTGALLTASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAATLGK 239
>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
Length = 285
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 9/228 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I +D+ L + S + + L ++ Y++ GGK+IR LV VN L ++
Sbjct: 3 IKKYIDESLFKEISERKIE--PALKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVK 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+ LLT AF I++
Sbjct: 61 TATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAED 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ R L+ ++ + G +GM+GGQ ++ +++ + ++ I KTG L+ FA
Sbjct: 121 ENL-SFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFA 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
S A +A A + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 180 VTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 227
>gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 309
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 8/242 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+L+ + ++T+LD LL + + RLL AIRY+ L GGK++R FL+ E A
Sbjct: 8 EFDKRLKTAADAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETA 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF V R AA+E IHCYSL+HDDLP++DN +RRG+ T H YDE TAI+ G+G
Sbjct: 68 RLFGVEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDG 127
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQVF 178
LLTYAF++++ P T IR++L+L+L G GM+GGQ + V
Sbjct: 128 LLTYAFDVLADPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVI 187
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+Q MKTGAL+ F+ +GAI+ A + L +G LG FQ+ADD+LD E D L
Sbjct: 188 RLQSMKTGALLHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEADEATLG 247
Query: 236 KK 237
K+
Sbjct: 248 KR 249
>gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 331
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S + ++ ++++T ++ L + ++ L S GGK+IR LV +
Sbjct: 17 SSIADDLRQVETAIEAALSTQETMLEEVSTHLLRS-------GGKRIRPALVILASRFPG 69
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V + V A+E IH +L+HDD+ +DN +RRG+PTV+ ++ +++ G+ L
Sbjct: 70 VELKQVIDVAVAVELIHMATLVHDDV--VDNADLRRGRPTVNALWNNQVSVLTGDYLFAK 127
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF +++ + S+++ ++ Q + ++++ KTG
Sbjct: 128 AFTLLADTGNNRVVRLMSEVVREMSQGELAQMASYFDVEQTEEDYYRR------IARKTG 181
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ AC GA+MA + + + + +G +G+ FQ+ADDLLD D
Sbjct: 182 YLIAEACRLGAVMAGVGEEQVQAVYDYGMGVGLSFQIADDLLDFFGDEE 230
>gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
Length = 321
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 6/221 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
++ L + + L I YAL GG K++R L SL++ + A+
Sbjct: 1 MENFLAQIENALSQQAYPTRPAGLYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIP 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
++E H ++L+HDDL R + L+ ++
Sbjct: 61 AALSVETYHNHTLLHDDLM-DGADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGG 119
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ ++ + G Q + + + E + + ++KT L+ A +
Sbjct: 120 YPNAAELLQLLARTAREVCEGQQYDMNFEQRNDVTE----AEYIEMIRLKTSVLLACALK 175
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A A ++ + L FGE +G+ FQL DD LDC D
Sbjct: 176 MGALVAGAPADQADLLYHFGEQIGLAFQLQDDYLDCYGDPA 216
>gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELAGASGIGGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 294
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 126/240 (52%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ L S Q N+++++ L+ L L+ A+RY LLGGK+ R FLV
Sbjct: 1 MHEALTSLQQRNNRQLERWLNQL---------PHQEQPLIEAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + + + R +++ +L G GM GQ L + + + +
Sbjct: 112 GDALQTLAFTILADGELSPEAETYRIKMVKALAEASGANGMCLGQALDLSAEGQKVSLAE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A +L F + +G+ FQ+ DD+LD D
Sbjct: 172 LENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIISDTE 231
>gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase
[Rhodobacter sphaeroides 2.4.1]
gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides]
gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Rhodobacter sphaeroides 2.4.1]
Length = 333
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L
Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + +++ LQ + +D + + + K
Sbjct: 126 ARSFQLMVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIY------LQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A + + E L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227
>gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
Length = 319
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 9/222 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+R + L+ + + +H L I Y L LGGK+IR L A+LF + T
Sbjct: 3 LERFSSSLERAFEEQ---VFGEHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWET 59
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ ++E H ++L+HDD+ MD +RRGKPTVH ++D AI++G+ +L A+E++
Sbjct: 60 AIEPAMSVEVFHNFTLMHDDI--MDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYELL 117
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + L + Q + ML + E + + + + ++KT L+ +
Sbjct: 118 SKLEASLLKKAILRFNKVAAEVCEGQQL---DMLFAEREEVSKEEYLEMIRLKTSVLVGY 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ E G I+A AS + E L GENLG+ FQ+ DD+LD D
Sbjct: 175 SMELGGIVAGASPDACELLYEVGENLGLGFQMTDDILDVYAD 216
>gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a]
Length = 302
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+GG + +E + L + + L A Y+L GGK+IR L E
Sbjct: 12 DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYRA--LYDAASYSLEAGGKRIRPVLAFE 69
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A+ A+E IH +SLIHDDLP MD+ +RRG+P+ H + E A++AG
Sbjct: 70 MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAG 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L YA + I + L GM+ GQ +D +F + +
Sbjct: 130 DALSAYAGKYICDSDLPAEKKTAMIKEL----YDRTLGMIEGQTIDTDGKFDTLDGLLSM 185
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD +L K
Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244
>gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491]
gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491]
gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Neisseria meningitidis WUE 2594]
Length = 298
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + +T +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMAQTDLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
Length = 297
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 124/239 (51%), Gaps = 11/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
++L++ I+ I+ L + +T + ++ ++ Y++ GGK++R L+ E
Sbjct: 2 SDFKNELEQEVVFINDIILRYLPE-----ETGLDKKIRESMNYSVNAGGKRVRPMLMLEV 56
Query: 62 ASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N AA+ECIH YSL+HDDLP+MDN RRG+ T H + E I+AG
Sbjct: 57 YKLCGGNDCQVVYPFMAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAG 116
Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
+GLL A+EI++ + +++ M + G++GM+GGQ +D++ ++
Sbjct: 117 DGLLNLAYEIMAEALVSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQ 176
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A +GA +A ++L +G FQ+ DD+LD L
Sbjct: 177 LDFIFRLKTGALIEAAFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLE 235
>gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
Length = 327
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 11/220 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L + S + L I Y L LGGK++R L+ +LF +
Sbjct: 8 ELLKQIHAYIESLPYSHEPKGLYDPIEYVLGLGGKRLRPVLMLLAYNLFKEDVQAIFSQA 67
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AAIE H ++L+HDDL MD +RRGKPTVH ++DE TAI++G+ A I+S
Sbjct: 68 AAIETYHNFTLLHDDL--MDKADMRRGKPTVHKKWDENTAILSGD-----AMLILSFQFM 120
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
+ + + + GQ D++ E ++ + + ++KT L+ A
Sbjct: 121 MQGCPVEYTHQVMDIFSRTALEVCDGQQWDMEFESREDVTVDEYMEMIRLKTSVLLAGAL 180
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ GA++ AS+ + + L FG +G+ FQL DD LD D
Sbjct: 181 KIGAVLGGASEKDAQLLYDFGIQIGLAFQLQDDYLDVYGD 220
>gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627]
gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYAIG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L + G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRLAMISELANASGIAGMCGGQALDLDAEGKQVPLEALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88]
gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89]
gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88]
gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82]
gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034]
gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146]
gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252]
gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 9/236 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ ++ +++ L + ++ L +A+RYA+L GGK++R LV
Sbjct: 5 DYDFARWMRGQLAQVEAGL-------SLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ + A++AG
Sbjct: 58 ACEAVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-M 179
+ L AFE+++ L G +
Sbjct: 118 DALQALAFELLTPEDGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRH 177
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA + ++ L +G +G+ FQ+ DD+LD +D
Sbjct: 178 MHRLKTGALLRASVVMGAACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233
>gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
Length = 331
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 12 LATLLSGDMDGVNALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLASARL 65
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 66 CGYEGPFHVHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNKSSVLVGDYLF 123
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF+++ P NI S ++ LQ QD +E + + K
Sbjct: 124 ARAFQLMVEPGNLRVLNILSNAAATIAEGEVLQL------TAAQDLRTNEDIYLQVVRGK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A + + + L +G+ LGI FQ+ DDLLD + D
Sbjct: 178 TAALFSAATEVGGVIAGVEEEQVQALFDYGDALGIAFQIVDDLLDYQGDSS 228
>gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
Length = 295
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ + S ++D L+ +L T + L +A+RY++ GGK++R L
Sbjct: 2 SSIKDIISHYSAQVDAQLEAMLPA-----ATGPAEPLFAAMRYSVFNGGKRLRPALCFAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + +V AA+E IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+AG+
Sbjct: 57 ADAVAGSDANTAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
GL + AF+ + ++L I +L+ +L+ G GM+ GQ +D ++ + +
Sbjct: 117 GLQSLAFQQL-CELSELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKV 175
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ ASQ + L+ F +G+ FQ+ DD+LD E
Sbjct: 176 MHAHKTGALIEASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVESSTE 232
>gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 299
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQTLAFAIISDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
Length = 298
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G
Sbjct: 59 ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ LD + + + A+RY+LL GGK++R L
Sbjct: 64 FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176
Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
LL AFE ++ + + + ++ L IG G++ GQM+D+ E ++ +V
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
I KT AL+ A G IM ++ E E+LR + +G++FQ+ DD+ D E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTE 296
Query: 233 DLPK 236
+L K
Sbjct: 297 ELGK 300
>gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 291
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHTYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ ++ +++ L + ++ L +A+RYA+L GGK++R LV
Sbjct: 5 DYDFARWMRGQLAQVEAGL-------SLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+++ + A++AG
Sbjct: 58 ACEAVGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-M 179
+ L AFE+++ L G +
Sbjct: 118 DALQALAFELLTPEDGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRH 177
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA ++ ++ L +G +G+ FQ+ DD+LD +D
Sbjct: 178 MHRLKTGALLRASVVMGAACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233
>gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
Length = 293
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L+ K +D + LL + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLNLFLEHYKKVVD---ESLLTEINKR---NIEPKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ + ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+
Sbjct: 57 QALQVDPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A AS + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
Length = 298
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 128/241 (53%), Gaps = 12/241 (4%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
MN L + Q + + +L+ L + + L A+RYA L GGK++R L
Sbjct: 1 MNPANDLKAWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPML 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + L H + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA+
Sbjct: 56 VLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATAL 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
+ G+ L T AF+++S T+L + ++ L G +GM GGQ +D + +
Sbjct: 116 LVGDALQTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQA 174
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 175 DLEQMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADT 234
Query: 235 P 235
Sbjct: 235 A 235
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ I+ IL L ++ ++ A+ Y+LL GGK++R L+ E
Sbjct: 2 NFKEERIGKITAIEQILKKYLP-----VKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+AG+
Sbjct: 57 VLFGGDEELIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
LL +AFE Q M L+ G+ GM+GGQ++D++ ++
Sbjct: 117 LLNFAFETAVKAFAMCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I ++KT AL+ A GA++A AS+ E +++ + +G+ FQ+ DD+LD
Sbjct: 177 FIYELKTSALIECAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTS 230
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + +E + ++ L L +T +D L A+ Y+L GGK++R L+ A
Sbjct: 1 MKERWRERQELVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ L V A+E IH YSLIHDDLP+MDN RRGK T H + + AI+AG+GL
Sbjct: 56 AVGADGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
LT AF +I + + +++ ++ G +GM+GGQ L ++ I ++ +
Sbjct: 116 LTLAFTVILRQQNV-SADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL A SGAI+ AS+ + L + E G+ FQ+ DD+LD
Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLAALTTYAEQFGLAFQITDDILDVIGTAE 228
>gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
Length = 321
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +D ++ + L ++T + + GGK++R +V
Sbjct: 1 MNLPALIAPITDDMKAVDAVIRERLNSEVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + I S+ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEANSMRIMQILSEATTVIAEGEVLQLL------NVHDPEVSQERYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHIGTAFQLIDDVLDYSGDALALGK 225
>gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217]
gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217]
Length = 293
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 130/238 (54%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L ++ +R+D +L + L Q L A+ Y AL+GGK+IR FLV
Sbjct: 2 LAQAIELYQQRVDIVLKNKLEQLD-----DCAPELKDAMTYGALMGGKRIRPFLVYAIGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V AAIECIH YSLIHDDLP+MD+ +RRGKPTVHI ++E AI+AG+ L
Sbjct: 57 MLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTVHIAFNEAQAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
+ AFE+++ + + ++ L G QGM GGQ +D ++ ID Q+ +
Sbjct: 117 QSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAIDLAATNKAIDLAQLTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KTGAL+ A E I+A AS E+ L F LG+ FQ+ DD+LD ++L K
Sbjct: 177 NKKTGALISCAVELAIILADASPVERAHLAQFSHALGLAFQVQDDILDVTVSTQELGK 234
>gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis]
gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis]
gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis]
Length = 320
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 15/235 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L +Q + +++ L + + + L GGK++R V
Sbjct: 1 MQSRLFQDIQNDLAKVEAELAKYADTSLPTLTAASSHLLH-------AGGKRLRPAFVLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N + L + A+E IH SL+HDD+ +D RRG PTV ++ +I G
Sbjct: 54 AGRFHNYSLERLLPLAVAMEMIHMASLVHDDV--VDESKTRRGIPTVKARWGNRISIHTG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + +I+ + +++ + + Q D
Sbjct: 112 DHLFARSLLLIAELNDDKISEVLAKVSVEMCKGEIQQM------SGTFDVNQTFRDYLFH 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ DD+LD D
Sbjct: 166 IKRKTALLISASCQLGAMAVKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEA 220
>gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
Length = 341
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 10/237 (4%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M L L+E K +D ++ +L+ + + +A Y L GGK+IR F+V
Sbjct: 1 MKFDPLFEALKEKIKIVDEVIFELIPEKEPKIIYD------AARHYPLAGGKRIRPFIVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
N A+ AA+E +H YSL+HDD+ MD RRG+PTVH + AI+A
Sbjct: 55 TSTEAVGGNPEKAVYAAAAVELLHNYSLVHDDIMDMDEK--RRGRPTVHKVWGVNMAILA 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + FE ++ + + ++ ++S T N +G E + +
Sbjct: 113 GDLLFSKVFEAVAKIPVEAEKVVKVLDVISKTSNELCEGQARDLEF-ENKETVTIDEYMK 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL+ + G ++ + + L +G N+GI FQ+ DD+LD D K
Sbjct: 172 MISGKTGALIDASATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEK 228
>gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520]
Length = 299
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGCRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans]
gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Herminiimonas
arsenicoxydans]
Length = 329
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +D ++ L + + Q D ++SA GGK+IR LV A+
Sbjct: 17 IAADMSAVDAVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANALGYR 69
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 70 GTHQYDLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDFLHSRAF 127
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + + LQ + D I E + + + KT L
Sbjct: 128 QMMVTVGNIRAMQILADATNVIAEGEVLQLLNM------HDPDISEERYTQVIRSKTAKL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A + GA++A AS++E E +G +LG FQL DD+LD D+ K
Sbjct: 182 FEAAAQLGALIAGASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGK 232
>gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1]
gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1]
Length = 293
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + ++E R+D L +L +A+ + ALLGGK+IR FLV
Sbjct: 2 LVNAIKEYQLRVDDQLKQRFSTLE-----DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A +++ + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
Length = 303
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 137/238 (57%), Gaps = 9/238 (3%)
Query: 2 NGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57
N LP ++ E + + +LD LL + RL A+RYA LG GK++R F
Sbjct: 7 NTDLPPLLQRMAETADLVTVVLDQLLPR-----GDGPECRLTEAMRYAALGPGKRLRPFF 61
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
E A LF+ + LR A+ECIH YSL+HDDLP MD+ IRRG+ TVH YDE TA+
Sbjct: 62 ALETARLFDADENAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGRLTVHRAYDEATAV 121
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L + AFEI++S T +R +L+ L G QGM GGQM+D+ D V
Sbjct: 122 LVGDALQSVAFEILASEDTHDDPLVRCELVRMLAQASGAQGMAGGQMIDLIGVHDDLGGV 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q++KTGAL+ +A + ++A + E + F ++LG+ +Q+ADD+LD E D
Sbjct: 182 ARMQRLKTGALIVYAFQIPLVVADVGEREGMVMTHFAQDLGLAYQIADDVLDIEGDPE 239
>gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190]
Length = 298
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF+++S T+L + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235
>gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735]
gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735]
Length = 323
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + + + L + ++Y L +GGK+IR L+ LF + + L
Sbjct: 4 EELLVKVNDFLDNLKYDRKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MDN +RRG TVH ++D TAI++G+ +L A+E ++
Sbjct: 64 ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + T +G + +++ + + + ++KT L+ A +
Sbjct: 122 PVYLSD--VLHTFTETALEIGEGQQYDMEFETRNDVTE-DEYIEMIRLKTSVLLACAQKI 178
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAI+A AS+ +++ L FGE +G+ FQL DD LD D KK
Sbjct: 179 GAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223
>gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
10507]
gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
10507]
Length = 295
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+L ++ I+ ++ L + L A+ Y+ L GGK++R ++ E
Sbjct: 2 NFKEELNLKTQEIEQLIRRYLPKEEGF-----ASTLARAMNYSMLAGGKRLRPLMMQEVY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F A+E IH +SLIHDDLP++DN RRG+ T + E +I+G
Sbjct: 57 RMFGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDNDEYRRGRETTWKVFGEDMGVISGAA 116
Query: 123 LLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--M 179
LL YA+E+ +S + + + L G+ GMLGGQ +D++++
Sbjct: 117 LLNYAYEVALSGFELTDRTERVVLALRVLAAKTGMYGMLGGQSVDVENDRKPLDLQLLDY 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
I + KT ALM + GAI+A A + ++ +G+ FQ+ DD+LD +L K
Sbjct: 177 IYENKTSALMEASMMVGAILAGAENTKIRQVEKAAGCVGLAFQIEDDILDVTSTQEELGK 236
>gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
blandensis MED217]
gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
blandensis MED217]
Length = 324
Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
RID + + + + L I Y L LGGK++R L +F +H AL
Sbjct: 3 RIDQYTEVFVAYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKAL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +L A+++
Sbjct: 63 DAALAVEVFHNFSLVHDDI--MDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAYQL--- 117
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + R+ L I + + + + + + + KT L+ A
Sbjct: 118 FENYEGETFRALAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAL 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ GAI+A+AS R+ +G +LGI FQL DD LD D
Sbjct: 178 KMGAIVANASAENANRIYEYGRDLGIAFQLQDDYLDAFGD 217
>gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
17029]
gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
17029]
gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
Length = 333
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L
Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + +++ LQ + +D + + + K
Sbjct: 126 ARSFQLMVETGSLRVMDILANASATISEGEVLQLTAAQDLRTTEDIY------LQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A + + E L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227
>gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895]
gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895]
Length = 299
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFSQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 RMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + + + +
Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMISELANASGIAGMCGGQALDLAAEGKQVPLEALER 176
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGENGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
M+ + ++ ++ ++ ++ L + L ++ Y+ GGK+ R L
Sbjct: 1 MDLAIQIDQEIAARTQAVNQFVEKYLSDMELPAGSAI-SELRKSMLYSATNGGKRFRPVL 59
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
LF L AA+E IH YSLIHDDLP MDN +RRGKPT H + E A+
Sbjct: 60 SLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFAL 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ LLT AF +I+ + L + + G + + +
Sbjct: 120 LAGDALLTEAFMLIAENYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEE 179
Query: 178 F-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ ++KTGAL+ A E A++A A E E L+ FGE LG+ FQ+ADD+LD
Sbjct: 180 LTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLD 232
>gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM
22836]
Length = 325
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
D IL + + + L I Y L LGGK++R L +L+ + +
Sbjct: 7 FDEILSIVNTEIKKIEYSSAPKSLFEPISYILSLGGKRVRPALSLMSYNLYKEDVERVIP 66
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ IE H ++L+HDDL MD +RRG PTVHI++++ TA+++G+ +L A++ I+
Sbjct: 67 IALGIEIFHNFTLLHDDL--MDRADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEIAKI 124
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+Q + + T Q M Q + + + ++KT L+ + +
Sbjct: 125 DSQYLKPVLDLFSTTATEICCGQQ---YDMEFEQRMDVTIAEYLEMIRLKTAVLLACSLK 181
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
GAI+A AS + E L +G ++G+ FQL DDLLD D KK
Sbjct: 182 EGAIVAGASAEDAENLYNYGIHVGLGFQLMDDLLDVYGDSSNFGKK 227
>gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
Length = 321
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +D ++ + L ++T + + GGK++R +V
Sbjct: 1 MNLPALIAPIADDMKAVDAVIRERLNSDVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + +I S+ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEADSMRIMSILSEATTVIAEGEVLQLL------NVHDPDVSQDRYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGK 225
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-A 62
+ +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+ A
Sbjct: 1 MKEFTKEHAPLIEEVMERFVKEHTS------DRRLFESMQYSIQAGGKRIRPLLLAATVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+G
Sbjct: 55 AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF++++ + + + LS + +++ + ++ I +
Sbjct: 115 LLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSIHE 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD +L K
Sbjct: 175 RKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231
>gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
Length = 324
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D I + A+ + L I+Y L LGGK+IR L+ +++ + + L
Sbjct: 5 DKIFSIINNYIATLAYDREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPESILNQ 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MD+ +RRG TVH +++ TAI++G+ +L AFE I+
Sbjct: 65 ACGLETYHNYTLLHDDL--MDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFERITRGN 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ Q + M + E + + ++KT L+ A +
Sbjct: 123 PSCLKALLDLFTVTALEIGEGQQL---DMEFEHRNDVTEAEYIEMIRLKTSVLLACALKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GA++ +AS+ + L FGE +G+ FQL DD LD D
Sbjct: 180 GAMLGNASEKDANNLYLFGEKIGLAFQLQDDYLDVYGD 217
>gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7]
gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7]
Length = 282
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 120/226 (53%), Gaps = 6/226 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ +++ + + ++ + ++ A++Y+L GGK+IR ++ + ++ N+ L
Sbjct: 1 MENLIEQINERLLEIIEEFGDSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLD 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ AIE IH YSLIHDDLP MDN +RRG+ T H Q+DE TAI+AG+ LL A +I
Sbjct: 61 IACAIEMIHTYSLIHDDLPGMDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVIIKT 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
K + I L I + ++ + + Q+ +I KTG L+ A +
Sbjct: 121 KVPDELKISLLATLYQASGINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAMK 180
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GA++A+ ++++ G +G+ FQ+ DD+LD D L KK
Sbjct: 181 MGALIAN--PDDQKTWVEIGYKIGLAFQIQDDVLDVVGDSSLLGKK 224
>gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1]
gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1]
Length = 326
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 12/234 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L E K ++ ++ + L A Y L GGK++R + +
Sbjct: 2 ELDKYFDEIIKNVNEEIEKYI--------KGEPKELYDASIYLLKAGGKRLRPLITVASS 53
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ + A + AA+E +H ++LIHDD+ MD +RRG PTVH+++ AI+AG+
Sbjct: 54 DLFSGDRKRAYKAAAAVEILHNFTLIHDDI--MDEDTLRRGMPTVHVKWGVPMAILAGDL 111
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQ 181
L AFE++S L + + ++ + ++ ++ E + +
Sbjct: 112 LHAKAFEVLSEALEGLDSKRFYMGLSEFSKSVIIIAEGQAMDMEFENRQDVTEEEYLEMI 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K KT L + G +++ A + E L+ FG NLGI FQ+ DD+L D
Sbjct: 172 KKKTAQLFSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEK 225
>gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
proteobacterium HTCC2255]
gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
proteobacterium HTCC2255]
Length = 329
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S L + ++++++ + A+ + + L+ A GGK++R L A
Sbjct: 8 DQLASLLNHDMVKVNSLIKKRMASDAAPRIPEVTEHLIDA------GGKRLRPLLTLAAA 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 62 EMCGNTSPYHIHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNQSSVLVGDY 119
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ +I + ++ LQ Q+ E + +
Sbjct: 120 LFSRSFQLMVETGNLRVLDILANASATIAEGEVLQL------TVAQNLSTTEDTYLKVIR 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT AL AC+ G ++++A + + L +G+ LG+ FQ+ DDLLD DL K
Sbjct: 174 GKTAALFGAACKVGGVISNAEEKIIDALASYGDALGVCFQITDDLLDYNGSSADLGK 230
>gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio brasiliensis LMG 20546]
gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio brasiliensis LMG 20546]
Length = 294
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L L N L+ A+RY LLGGK+ R FLV
Sbjct: 1 MQEALTSLQQRNNQQLDNWLQSL---------PHQNLPLIEAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + +N R +++ L G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGERVLPLLDQYADAIGLAFQVQDDILDIISDTE 231
>gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus]
Length = 317
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ + ++ I+ +++LL + L A R+ + GGK++R +
Sbjct: 2 LKEEIAKRAEIINKAIEELLPERE-------PIGLYKAARHLIKAGGKRLRPVISLLAVE 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ + +IE IH ++L+HDD+ MD +RRG PTVH Y E TAI+AG+ L
Sbjct: 55 ALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGDTL 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AF++++ + + ++ MLS +G + ++ + + + ++
Sbjct: 113 FAEAFKLLTKCDVESEGIRKATEMLSDVCIKICEGQYYDMSFEKKESVSE-EEYLRMVEL 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ + A++ S+ + L +G GI FQ+ DDLLD E+ K
Sbjct: 172 KTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 224
>gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
Length = 294
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + L+E + ID + + L + + ++YA+L GGK++R L+
Sbjct: 2 LKNYLKEKREIIDESVKNYLDDLK------YPKVIADGMKYAVLNGGKRLRPILLLMTLK 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AIE IH YSL+HDDLP++D+ RRGK T H +Y E I+ G+ L
Sbjct: 56 LLGEREEKGIPAAVAIEMIHSYSLVHDDLPALDDDDYRRGKLTTHKKYGEAQGILIGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ 181
LT+AF +++S ++ ++ + G+ GM+GGQM+DI+ E I
Sbjct: 116 LTHAFNVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMIGGQMVDIESEGKSIDLPVLQYIH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG ++ E I+A +KE+L + E +G+ FQ+ DD+LD E D K
Sbjct: 176 THKTGKMISLPVEVACIIAGIEGEKKEKLIEYSELIGLAFQIKDDILDIEGDFEK 230
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 128/239 (53%), Gaps = 10/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
N L LQ +R + L L Q + LL A++Y ALLGGK++R FL
Sbjct: 3 NSSLLQLLQHYQERNNQQLTHWLDA-----QPFADQTLLKAMKYGALLGGKRVRPFLTYV 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++ VN AAIECIH YSLIHDDLP+MD+ +RRG+PT HI +DE TA++AG
Sbjct: 58 TGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAG 117
Query: 121 NGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQV 177
+ L T AFEI++ + ++ R +++ L G GM GQ LD+ E TQ+
Sbjct: 118 DALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQL 177
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KTGAL+ A GA+ A +L + E +G+ FQ+ DD+LD D
Sbjct: 178 EQIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTE 236
>gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1]
gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1]
Length = 328
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD L + + + L I Y L +GGK+IR L ++ N L
Sbjct: 9 ALLDKLEVFIQNQNFGESPKELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQA 68
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+AIE H ++L+HDD+ MD +RRG TVH ++D AI++G+ +L A++++ +
Sbjct: 69 SAIEVFHNFTLMHDDI--MDQAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEP 126
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L I + Q M + ++E + ++KT L+ A + G
Sbjct: 127 ALLPEIIRLFNKTAADVCEGQQ---FDMNFENQDHVNEKDYLNMIRLKTAVLLGCALKMG 183
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AI+ AS +E RL FG N+GI FQL DDLLD D K
Sbjct: 184 AILGGASSDEAHRLYEFGVNVGIGFQLKDDLLDVFADQEK 223
>gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6]
Length = 299
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P + + K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQFEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 322
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 13/230 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
L++ ++ I+ + + L+ +L +RY L LGGK++R L LF
Sbjct: 2 KSLEQYTRFIEEKIAGINLEEE-------PRKLYDPLRYFLSLGGKRMRPILTLISGELF 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+++ +L IE H +SLIHDD+ MD +RRGKPTVHI+++ AI++G+ L
Sbjct: 55 QISNEESLSAALTIELFHNFSLIHDDI--MDEAPVRRGKPTVHIKWNSSVAILSGDVLFV 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
++ ++ + + + + Q + + + ++KT
Sbjct: 113 EGYQQLAKYTDKRLPILLKRFNETAIEVCQGQQLDMDFESRDDVTEEAYIE---MIRLKT 169
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A E GAI+ + S+ + L FG +LGI FQ+ DD+LD D
Sbjct: 170 SVLLGCALEFGAILGNQSEETRNHLYHFGVSLGIAFQIQDDILDLYGDPE 219
>gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 299
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L AF IIS P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQALAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 291
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RASVHMGALTGGAATADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 331
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 14/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + L ++ ++ ++ + + + + L+ A GGK+IR L A
Sbjct: 10 EAIAALLADDLGAVNALIRERMASRHAPRIPEVTAHLVEA------GGKRIRPMLTLAAA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 64 RLCGYDGPYHIHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF+++ P +I S ++ LQ QD E + +
Sbjct: 122 LFARAFQLMVEPGNLRVLSILSDAAATIAEGEVLQL------SAAQDLKTTEETYLQVIR 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL A E+G +A AS + L +G+ LGI FQ+ADDLLD
Sbjct: 176 GKTAALFSAATEAGGEIAGASPAQVRALFDYGDALGIAFQMADDLLDWTG 225
>gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
Length = 323
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 22/237 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L+E + + ++ L + Y + GGK++R +V +F
Sbjct: 3 FLEEYQEIVTKAVEKY-------TFKDKPTELYDPMNYIISHGGKRLRPIMVLMANDMFG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A++ AIE H ++LIHDD+ MD +RR KPT+H + I++G+ L
Sbjct: 56 GDIQKAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNAGILSGDAL--- 110
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKM 183
++ S K + GQ DI E + +
Sbjct: 111 ---LLKSYKFFEDLEPELFKACIRVFTHTGLLLCEGQQYDINFETLGDVTFNDYIRMITY 167
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L + E GA++A + + + + FG+NLGI FQ+ DD LD D KK
Sbjct: 168 KTGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLGIAFQIMDDYLDVFGDQEQFGKK 224
>gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915
[Aromatoleum aromaticum EbN1]
Length = 322
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L + + + + +D ++ + L ++ + S GGK++R LV
Sbjct: 3 TQQLYAPIATDMQAVDAVIRERLHSDVVLIRQVAEYIIHS-------GGKRLRPALVLFS 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + ++ A +E IH +L+HDD+ +D +RRG T + + +++ G+
Sbjct: 56 AGAMGYRGQSHHQLAAVVEFIHTATLLHDDV--VDESELRRGNKTANALFGNAASVLVGD 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T AF+++ + + + LQ + + +D +
Sbjct: 114 FLYTRAFQMMVGVGDMRVMQVLADATNIIAEGEVLQLLNC------HNADVDIEDYLRVI 167
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A GAI+ A++ ++ ++ FG +LG FQ+ DD+LD D
Sbjct: 168 RYKTAKLFEAATRLGAILGGANEEQERKVAAFGMHLGTAFQIIDDVLDYSSDEA 221
>gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
proteoclasticus B316]
gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
proteoclasticus B316]
Length = 313
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M +L + + I+ IL L + + +T ++ A+ Y+LL GGK++R ++
Sbjct: 1 MGNDFNKRLADKAAHIEDILKAFLPKEEGYART-----VIEAMNYSLLAGGKRLRPMMIL 55
Query: 60 ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
E LF + + AA+E IH YSL+HDDLP+MDN RRG+ T H Y A
Sbjct: 56 EAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMA 115
Query: 117 I----------IAGNGLLTYAFEIISSPKTQLKDNIRSQLML------SLTHNIGLQGML 160
+S + + L + G +
Sbjct: 116 TLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADI 175
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ E + + I + KTGAL+ + GA++ AS + + G N+GI
Sbjct: 176 CAENATEIPEDEMKDTLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVGIA 235
Query: 221 FQLADDLLDCEEDLP 235
FQ+ DD+LD
Sbjct: 236 FQIQDDILDITSTSE 250
>gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945]
gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02]
gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140]
gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19]
gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1]
gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332]
gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035]
gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945]
gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 298
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
Length = 300
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+E + +I+ IL L + + + ++ A+ Y+ L GGK++R L+ E
Sbjct: 6 SFKEIQKEKTAQIERILKAYLPRAQGY-----QEVIMDAMSYSMLAGGKRLRPMLMQETY 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I+ G+
Sbjct: 61 RLFGGADSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDA 120
Query: 123 LLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
LL YAFE +S + + + L G+ GM+GGQ++D++ + ID ++
Sbjct: 121 LLNYAFETAASAFETAPEKSLLIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLE 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ + GA++A A + + +G+ FQ+ DD+LD
Sbjct: 181 FIYRLKTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDVISTTE 237
>gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS]
Length = 321
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +DT++ D L ++T + + GGK++R +V
Sbjct: 1 MNLPELIAPIADDMKAVDTVIRDRLNSDVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + I SQ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEADSMRIMQILSQATTVIAEGEVLQLL------NVHDPDVSQERYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A AS ++ +G ++G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGDAHALGK 225
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
S + + ++ LD S + + ++ A+RY+LL GGK++R L L
Sbjct: 15 SYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 67
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ A+E IH SLIHDD+ D + L
Sbjct: 68 GGEESLAMPAACAVEMIHTMSLIHDDVYGEDVAVLAGD-----------------ALLSF 110
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ S+ +++ + + L IG +G++ GQ++DI + ++ + I KT
Sbjct: 111 AFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISNVGLEHLKF--IHLHKT 168
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL+ + G I+ S E ERLR F +G++FQ+ DD+LD
Sbjct: 169 AALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 214
>gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus abyssi GE5]
gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate
synthase [Pyrococcus abyssi GE5]
Length = 346
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L ++++E +K +D L +L+ + L A R Y L GGK+IR F+V
Sbjct: 9 DELFNRIKERAKLVDEKLFELIPEKE-------PKVLYEAARHYPLAGGKRIRPFVVLTA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+
Sbjct: 62 TEAVGGNALKAIYPAVAIELIHNYSLVHDDIMDMDET--RRGKPTVHKVWGINMAILAGD 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE IS + + + + N +G E + + +
Sbjct: 120 LLFSKAFEAISRAEISPEKKAKVLETIVKASNELCEGQALDLEF-ENREMVSIEEYMRMI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + + G I+ ++ E L +G N+G+ FQ+ DD+LD D K
Sbjct: 179 SGKTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEK 233
>gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
Length = 299
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
L + +R++ + + Q + L++AI Y ALLGGK++R FLV
Sbjct: 2 DFNVLLTSHYQRVNAAIQGFVSQL-----PFQSTPLVNAIEYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ + + AA+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+
Sbjct: 57 NMLHADDAALDAPAAAVECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEDAAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + R ++ L G+ GM GGQ L + + + ++
Sbjct: 117 LQTLAFSILADAPMPGVTAESRVAMLSELAQASGVAGMCGGQALDLAAEGKRVTLDELEQ 176
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A A + L F + +G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRSAVRLGALSAGAPGRAALPALDRFADAIGLAFQVQDDILDVIGDTVVLG 236
Query: 236 KK 237
K+
Sbjct: 237 KQ 238
>gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 298
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ + L +R + L+ L + N L+ A+RY +LGGK+ R FLV
Sbjct: 1 MDNSMIDVLASFQQRNNQQLNLWLDKL-----PHQNQALIQAMRYGLVLGGKRARPFLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+
Sbjct: 56 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 116 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A GA+ A +L F +G+ FQ+ DD+LD D
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKFSTAIGLAFQVQDDILDIISDTE 235
>gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 326
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64
+++N+K ++ L+ L + L A + + GGK++R ++V + +
Sbjct: 4 EKSIEKNAKIVNKYLNSKL--------KGNPKSLYDAASHLIVHGGKRLRPYMVIKSCQI 55
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N TA+ +A+E IH ++L+HDD+ MDN +R G PTVH ++ AI+AG+ L
Sbjct: 56 LGGNTATAMPAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTVHKKFGMPIAILAGDVLF 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ A++IIS ++ L+ +G L + + + + K
Sbjct: 114 SKAYQIISESNISKDSTVQLVSRLAKACVDVCEGQLLDVKMAEGKRIPTQKEYIAMIGKK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
T AL +C GAI A +Q + L FG+NLGI FQ+ DDL+ D KK
Sbjct: 174 TAALFDVSCSMGAICATNNQKDILNLSNFGKNLGIAFQITDDLIGVMGDSKITKK 228
>gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21]
gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21]
Length = 328
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L++ S ID + + L + L+ A GGKKIR +V A
Sbjct: 7 LKKYSSDIDEEIQNSLSTVDPEELKKSTQHLIKA------GGKKIRPSMVVLSAIAVGGA 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL+ AA+E IH +SLIHDD+ MD +RRG+P+VH+ + E AI+AG+ L + AF
Sbjct: 61 PEEALKTAAAVELIHTFSLIHDDI--MDEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTG 186
E + R L + ++ G + + ++ + KTG
Sbjct: 119 ETVLETPIDNVSYERVVGALKTVVDSCIKICEGQASDMCFEGNFEVSEEAYMNMIYKKTG 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
AL+ + +SGAI+ + + E L +G +G+ FQ+ DD LD E+DL K
Sbjct: 179 ALIAASTKSGAIIGGGTPEQVELLSEYGRLVGLAFQIQDDYLDVMSDEQDLGK 231
>gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2]
gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2]
Length = 299
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ ++ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSL+HDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L G+ GM GGQ L+ + ++ +
Sbjct: 117 LQTLAFSIISDAPMPEVTDRDRIAMISELAQASGIAGMCGGQALDLEAEGHQVELDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 293
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 137/237 (57%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ + + D L Q N+ L A+ Y L GGKKIRS+L
Sbjct: 2 STFDTDIKLVADKTDQYLKSYFSQQKQ------NNELFEAMGYGLFAGGKKIRSYLTVAA 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF++ TA+ V AAIEC+H YSLIHDDLPSMDN RRGK + H ++ E TAI+AGN
Sbjct: 56 FDLFDIKEETAIAVAAAIECVHSYSLIHDDLPSMDNDDFRRGKESTHKKFGESTAILAGN 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
LLT AFEI++S L ++S L+ +L G G+ GGQ LD+ E + + +
Sbjct: 116 SLLTIAFEILTSNHLNLDKEVKSDLVFALASCSGHLGIAGGQFLDLSFEGKAQDEKTIIH 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTG LM F E+ AI+A + N++E L+ G ++G++FQ+ADDLLD D K
Sbjct: 176 MQNKKTGELMGFCTEAAAIVAKKN-NDREELKKIGLDIGLLFQIADDLLDVYGDQNK 231
>gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
Length = 328
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 100/236 (42%), Gaps = 10/236 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+ +D ++ + R+ A+RY+ L GGK +R L+ A
Sbjct: 30 ASWRREVDQLVLRARRALDQVLPPVTAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCVG 89
Query: 67 VNHLTALRVGAAIEC---IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V A +H YSLIHDDLP+MD+ +RRG+P H+ + E AI+AG+ L
Sbjct: 90 GPQVVTPAVERAAAAVELVHTYSLIHDDLPAMDDDDMRRGQPANHVVFGEAMAILAGDAL 149
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----M 179
LT AFE+++ D + ++ L G +D
Sbjct: 150 LTLAFEVLAGLPRWGADPAVALAVVEELAVAAGTAGLIGGQVDDLAATTAAGLDLAGLQS 209
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL GA +A A+ E E L F G FQ+ DD+LD D
Sbjct: 210 IHRRKTGALFRACVRMGARLAGATATELEALTAFATAFGEAFQIVDDILDVTGDEA 265
>gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
Length = 306
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ +L + +R++ L D + L+ A+RY A+LGGK++R +LV
Sbjct: 7 STDFSQQLAAHQQRVNQALLDFIAPL-----PFGESDLVEAMRYGAVLGGKRLRPYLVYA 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F ++ AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG
Sbjct: 62 TGQMFGLSLTALDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121
Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L T AF I++ + D R ++ L H G+ GM GGQ L+ + I ++
Sbjct: 122 DALQTLAFTILAEAEMPDVADKDRLAMVAELAHASGVAGMCGGQALDLEAEARQISLAEL 181
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEEDL-- 234
I + KTGAL+ A GA+ A A L + E +G+ FQ+ DD+LD D
Sbjct: 182 EQIHRHKTGALIRAAVRLGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIGDTAT 241
Query: 235 -PKK 237
K+
Sbjct: 242 IGKR 245
>gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 296
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 129/241 (53%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
++ + +R+D +L + H RL A++YALL GGK++R FLV
Sbjct: 2 TFDTQQKRVHQRVDALLQAQISDLDEH-----APRLKKAMQYALLMGGKRMRPFLVYAVG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ AIECIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+
Sbjct: 57 EALGVSESDLDAPALAIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDA 116
Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
L T AF+I+ + + + R +L+ L+ G GM GGQ +D+Q I + Q+
Sbjct: 117 LQTLAFDIVVNYPLSDFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQ 176
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGAL+ A + A ++ S K L + + +G+ FQ+ DD+LD D L
Sbjct: 177 LHSKKTGALIIAAVKMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGDSKTLG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 294
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+++++ LD L N L+ A+RY +LGGK+ R FLV
Sbjct: 1 MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+
Sbjct: 52 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 231
>gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
Length = 320
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
++++ ++ ++ D L ++ + L+ A GGK++R LV A
Sbjct: 4 FQQVVKDDFAAVNQLIIDQLHSDVGLVENIGH-YLVEA------GGKRLRPLLVMLAAKS 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L + A IE IH +L+HDD+ M +RRG+PT + Q+ +++ G+ L
Sbjct: 57 LGYTGKQHLDLAAIIEFIHTATLLHDDVVDMSQ--LRRGRPTANAQWGNAPSVLVGDFLY 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF+++ + + I S ++ Q + ++ + + K
Sbjct: 115 SRAFQMMVAIGSMDVMAILSDTTNTIAEGEVQQLVNAKDPNVTEENYFQ------VIDKK 168
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T L ACE G ++A A+ ++E LR +G ++GI FQL DD LD D L K
Sbjct: 169 TAILFSAACEVGGVIAGANTRQREALRHYGSHVGIAFQLVDDALDYTGDAATLGK 223
>gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937]
gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937]
Length = 303
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M +L + +RI+ L+ + + L+ A+ + ALLGGK++R FLV
Sbjct: 1 MT-DFLKQLTAHHQRINATLNQFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF ++ AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A
Sbjct: 55 TTGQLFGISQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ P ++ D R ++ L G+ GM GGQ L+ + +D
Sbjct: 115 GDALQTLAFSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLA 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ + GA+ A L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYANAVGLAFQVQDDILDVIGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L Q ++L ++ Y+L+ GGK+IR L
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNS-----PNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++++ T + + + G +GM+GGQ D +D+ I ++ ++
Sbjct: 117 LTYAFQLMT-SNTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K
Sbjct: 176 SGKTGALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
Length = 298
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 125/239 (52%), Gaps = 11/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L +E++ I+ +++ + + S + RL +++Y++ GGK+IR L+
Sbjct: 2 SALTEFTKEHAPLIEEVMERFVKEHTS------DQRLFKSMQYSIQAGGKRIRPLLLAAT 55
Query: 62 -ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A+ + + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG
Sbjct: 56 VAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAG 115
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLLT AF++++ + + + LS + +++ + ++ I
Sbjct: 116 DGLLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALSLEELMSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTG L+ FA +G ++A ++ L F +++G+ FQ+ DDLLD +L K
Sbjct: 176 HERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 234
>gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
Pseudomonas Fluorescens Pf-5
gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
Length = 304
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + + R+D L + + RL A RY++ GGK++R L
Sbjct: 2 SLTAYQASSQARVDAAXHTLFTAPSPELA-----RLYEAXRYSVXNGGKRVRPLLAYAAC 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
A A+E IH YSL+HDDLP+ D+ +RRG+PT H +DE AI+AG+G
Sbjct: 57 EALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHKAFDEACAILAGDG 116
Query: 123 LLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
L + AF + + + +R L+ L +D+ +
Sbjct: 117 LQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLGSVGLKLDQQALEY 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGAL+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D L
Sbjct: 177 XHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 295
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ + ++ + + L Q + + +A +Y L GGK++R FLV
Sbjct: 2 SINNYIERAQRDVVATLQQHFKQ-----PLDTEETVKNATQYGLFNGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 57 KMLGANQQDLHVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIEFGEANAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
L T AFE+I++ K + +++ +L H GL+GM+GGQ + D+ I ++ I
Sbjct: 117 LQTLAFELIANHKFTCSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELARI 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K+KTGAL+ A GA+ + A Q E L FG +G+ FQ+ DD+LD E D L K
Sbjct: 177 HKLKTGALINCAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGDTVTLGK 236
>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
Length = 293
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L+ K +D D LL + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEHYKKVMD---DSLLTEINKR---NIEPKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + + ++ A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+
Sbjct: 57 QALNTDPMRGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF +++ L R L+ L+ + G +GM+GGQ ++ +++ I ++ I
Sbjct: 117 LLTLAFSVLA-EDANLTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A+ + +RLR F EN+G+ FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKK 235
>gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
Length = 294
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/239 (34%), Positives = 123/239 (51%), Gaps = 11/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
+N L S + I+ L+ L+ + + L A RYALLGG K+IR L
Sbjct: 4 VNHDLTSYIT----LIENKLEALIPSC-----SGADACLYEAARYALLGGGKRIRPILTL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LFN + AL AIE IH YS+IHDDLP MD+ RRGKP++H Q++E A++
Sbjct: 55 ATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDDDDFRRGKPSLHKQFNEALAVLT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLT AFE+IS + + + + G + G + + + +
Sbjct: 115 GDFLLTRAFEVISEDRQLNVEMQIDLIRTIACASGGKGMIGGQVIDISSEGKGLDLKQLQ 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KTGAL+ A E G I+A AS E++ F +++G+ FQ+ DDLLD + K+
Sbjct: 175 HLHAKKTGALITAAVECGCIVASASDEERQPALQFAQDIGLAFQIVDDLLDITSGVKKR 233
>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 293
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L+ K +D + LL + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLSLFLEHYKKVVD---ESLLTEINKR---NIEPKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ ++ ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+
Sbjct: 57 QALQVDPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A AS + +RLR F EN+G+ FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKK 235
>gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6);
farnesyltranstransferase [Arabidopsis thaliana]
gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 13/248 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALL-GGKKIRSFLVT 59
+ S ++ +K I+ LD+ + + + + A+RY LL GGK++R L
Sbjct: 29 DSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCL 88
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L TA+ A+E IH SLI DDLP MD+ +RRGKPT H + E T+I+A
Sbjct: 89 VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILA 148
Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-------MLDIQDEF 171
N L + A + ++S + + + + +G +G++ GQ + ++E
Sbjct: 149 SNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 208
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + ++ KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD
Sbjct: 209 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 268
Query: 232 ---EDLPK 236
E+L K
Sbjct: 269 KSSEELGK 276
>gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
HTCC2170]
gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
HTCC2170]
Length = 334
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+ + + +T+ L + Y L LGGK++R L +F +H+ A+ AIE
Sbjct: 20 EFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMDAALAIE 79
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
H +SL+HDD+ MD+ +RRGKPTVH ++D T I++G+ +I + +
Sbjct: 80 IFHNFSLVHDDI--MDDAPLRRGKPTVHEKWDLNTGILSGD------AMLIRAYQLFENY 131
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGA 197
+ L+ + + GQ DI E ++ + + + KT L+ A + G
Sbjct: 132 ESDTFRELAQLFSKTALEVCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAAAMKMGG 191
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I+A+AS +++ + FG+NLG+ FQL DD LD D
Sbjct: 192 IIANASSTDQDCIYDFGKNLGLAFQLQDDYLDAFGD 227
>gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
hydrogenoformans Z-2901]
Length = 326
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 18/233 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
++E+ ++I+ L + + + A+ GGK++R A L +
Sbjct: 13 ELVKEDLRKIEQELIKEVSERNEFLHDP-------AMHLLKAGGKRLRPAFALLAAKLGD 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A+E IH +L+HDD+ +DN +RRG PTV + +I G+ +
Sbjct: 66 YDFEKVKPLAVALELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAK 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ +I S K + +++ + +T Q ++ + K KT
Sbjct: 124 SLLLIDSCKNNYVAKVLAEVSVKMTTGEIQQL------NGAKNISTSIKDYLIKIKRKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ +CE G +MA+ S L+ +G +G+ FQ+ DD+LD D L K
Sbjct: 178 LLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGK 230
>gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306]
Length = 291
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLAAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGGAALADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
Length = 301
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 6/229 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
++ E + + LD LL + RL A+RYA LG GK++R F E A LFN
Sbjct: 14 RVAEVADLVTVALDQLLPRADGP-----EARLTEAMRYAALGPGKRLRPFFALEAARLFN 68
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ + LR A+EC+H YSL+HDDLP MD+ +RRG+PTVH YDE TA++AG+ L T
Sbjct: 69 IDERSVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTVHRAYDEATAVLAGDALQTA 128
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF+II T +R +L L+ G +GM GGQM+D+ D V +Q++KTG
Sbjct: 129 AFDIILHEDTHEDAVVRCELAARLSMASGARGMAGGQMIDLLGVRDDLGGVARMQRLKTG 188
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL +A E I+A AS + L F ++G+ +Q+ DDLLD E
Sbjct: 189 ALFAYAFEIPLIIAEASAQHQHALISFAHDVGLAYQIVDDLLDAEGSAE 237
>gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
Length = 326
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 13/235 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL 64
++++N+K ++ L L + +L A + GGK++R ++V +
Sbjct: 4 TKQIEKNAKTVNKYLKSKL--------KGNPKKLYDAAGHLIVHGGKRLRPYMVIRSCQI 55
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A+ +A+E +H ++L+HDD+ MDN +R G PT H +Y AI+AG+ L
Sbjct: 56 LGGKSSNAMPAASAVEMVHNFTLVHDDI--MDNDEMRHGVPTTHRKYGMPIAILAGDVLF 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ A+++IS K L+ +G L + + + ++Q + K
Sbjct: 114 SKAYQVISDTKLSPTATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
T AL +C GAI A + L FG NLGI FQ+ DDL+ D KK
Sbjct: 174 TAALFDVSCAMGAICATNKGKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKK 228
>gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
Length = 280
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 2/205 (0%)
Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
Q RL A+ YA+L GGK++R LV +LF+ + R AA+E IH YSL+HDD
Sbjct: 13 AQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDD 72
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+P MD+ +RRGKPTVH++YDE A++ G+ L + AF++++ + +L+
Sbjct: 73 MPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGLDPVRQLAMVRLLAKA 132
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERL 210
L + ++ + ++KTGAL+ + GA+ A S E + L
Sbjct: 133 SGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGALAGKALSAEETQAL 192
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
+ +G+ FQ+ DD+LD D
Sbjct: 193 DSYAAAIGLAFQVVDDVLDATADSA 217
>gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
DSM 14838]
Length = 324
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L++ A T+ L + + Y L +GGK+IR L+ +L+ +
Sbjct: 6 ELLENFNSHIAGLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++ +
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPS 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M Q + + + ++KT L+ + + G
Sbjct: 124 TFLKEVMDLFSLTALEICEGQQM---DMEFEQRNDVTAEEYLEMIRLKTAVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + AS + +RL FG ++G+ FQL DDLLD
Sbjct: 181 ARLGGASVEDADRLYDFGMHIGVAFQLKDDLLDVYG 216
>gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter
atlanticus HTCC2559]
gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter
atlanticus HTCC2559]
Length = 324
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ I + + + S + + + L I Y L LGGK++R LV +F ++
Sbjct: 1 MQEISSYREAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L A+E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +I
Sbjct: 61 GLDAALAVEVFHNFSLVHDDI--MDDAPLRRGKDTVHEKWDLNTGILSGD------AMLI 112
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
++ + + + L+ + GQ DI E D+ + + + KT L
Sbjct: 113 NAYQLFENYDGSTFKELAKLFTKTAIEVCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ A + GAI+A+A + K+++ FG LG+ FQL DD LD D
Sbjct: 173 VGAALQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGD 217
>gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
Length = 294
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q ++++++ LD L L+ A+RY LLGGK+ R FLV
Sbjct: 1 MQEALTSLQQRSNQQLERWLDTL---------PHQQQPLIDAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + AAIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + + R ++ L G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGQLSPEAEAQRIMMVKVLAEASGAAGMCMGQALDLAAENRIVSLQE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVISDTE 231
>gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090]
gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18]
gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18]
gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1]
gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2]
gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090]
gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
Length = 298
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGGAMADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000]
gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase)
protein [Ralstonia solanacearum GMI1000]
Length = 299
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L ++ RL +A+RYA LG GK++R L
Sbjct: 2 SDFAHWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF ++ R+ L+ L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFIALAELGAV-SPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
Length = 324
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A + L I Y L +GGK+IR L+ +L+ N A
Sbjct: 6 ELLEKINSHIADLRFVRSPKGLYDPITYVLSMGGKRIRPVLMLMAYNLYKENVEPAFSSA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q M M Q + E + + ++KT L+ + + G
Sbjct: 124 KHLKEVMDLFSLTAFEICEGQQM---DMEFEQRNDVKEEEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS ++ RL FG N+G+ FQL DDLLD D
Sbjct: 181 ALLGGASADDAARLYDFGMNMGVAFQLKDDLLDVYGDAA 219
>gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
Length = 320
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L L + +D ++ L + + + S GGK++R LV A
Sbjct: 2 ENLKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINS-------GGKRLRPALVLLSA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 55 QAFGYGGKHHHDLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDF 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ + + LQ + D +D +
Sbjct: 113 LYSRSFQMMVDVGEMRVMQTLADATNVIAEGEVLQLLNC------HDASVDIPNYMRVIH 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GAI+ AS ++E +G +LG FQL DD+LD D
Sbjct: 167 CKTAKLFEAAMRLGAILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEA 219
>gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Sagittula stellata E-37]
gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Sagittula stellata E-37]
Length = 325
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 7 LAADLVAEMAAVNDLIRERMASRHAPRIPEVTAHLVEA------GGKRLRPMLTLASAKL 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 61 CGYDGPYHVHLAATVEFIHTATLLHDDV--VDESERRRGRPTANLLWDNKSSVLVGDYLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ I S ++ LQ + +D + + + K
Sbjct: 119 ARSFQLMTETGNLRVLRILSDAAATIAEGEVLQLTAAQDLSTTEDIY------LQVVRGK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A + + L +G+ LGI FQ+ DDLLD
Sbjct: 173 TAALFSAATEVGGVIAGRPEEDVRALFDYGDALGIAFQIVDDLLDYWG 220
>gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
Length = 289
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 15/237 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + R+ LD L ++ A+RYA+ GGK++R FLV E A
Sbjct: 2 SFSKALTDAAARVQGRLDAALADREDL-------PVVHAMRYAVQGGKRLRGFLVLESAR 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ A+IE +H YSL+HDD+P MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179
T AFE+++ P +R +L+ SL G +GM+ GQ LDI E Q+
Sbjct: 115 QTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTGAL+ ++ E+GAI+ A + LR + LG+ FQ+ADD+LD E D K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227
>gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 299
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + + I +
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDHYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT]
gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosaeta thermophila PT]
Length = 327
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G L ++L+ + I +D+LL + L A R+ L GGK++R L+
Sbjct: 7 GDLEAELRRRADLISKAIDELL-------PVSRPEGLYDAARHLLGAGGKRLRPSLLLIA 59
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + AIE +H ++LIHDD+ MDN +RRGKP VH+ + AI+AG+
Sbjct: 60 GESVGCDAARLVPAAVAIELVHNFTLIHDDI--MDNASLRRGKPAVHVIWGTSGAILAGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE++S + + + ML+ T +G + + + + +
Sbjct: 118 TLYSKAFEMLSMVDAPPERVLAAMDMLARTCTSICEGQWQDLEFERAESVTE-KEYLEMI 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPKK 237
+ KTG L + GA + A L FG G+ FQ+ DD+LD ED L K+
Sbjct: 177 EKKTGVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILDLTVPEDVLGKR 235
>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 298
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ + L +R + L+ L + N L+ A+RY +LGGK+ R FLV
Sbjct: 1 MDNSMIDVLASFQQRNNQQLNLWLDKL-----PHQNQALIQAMRYGLVLGGKRARPFLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + +AIECIH YSLIHDDLP+MD+ +RRG+PT H+++DE TAI+
Sbjct: 56 ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 116 GDALQTLAFTILAEGTLSADGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A GA+ A +L + +G+ FQ+ DD+LD D
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 235
>gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
Length = 293
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L+ K +D + LL + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLNLFLEHYKKVVD---ESLLTEINKR---NIEPKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + ++V A+E IH YSLIHDDLP+MDN RRGK T H Y + TAI+AG+
Sbjct: 57 QALQADPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++ + G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A AS + +RLR F EN+G+ FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKK 235
>gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Archaeoglobus fulgidus DSM 4304]
gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
{Methanobacterium thermoautotrophicum [Archaeoglobus
fulgidus DSM 4304]
Length = 326
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L ++ + ++ I+ +++LL + L A R+ + GGK++R +
Sbjct: 9 AMLKEEIAKRAEIINKAIEELLPERE-------PIGLYKAARHLIKAGGKRLRPVISLLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ + +IE IH ++L+HDD+ MD +RRG PTVH Y E TAI+AG+
Sbjct: 62 VEALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGD 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AF++++ + + ++ MLS +G + ++ + + +
Sbjct: 120 TLFAEAFKLLTKCDVESEGIRKATEMLSDVCIKICEGQYYDMSFEKKESVSE-EEYLRMV 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++KTG L+ + A++ S+ + L +G GI FQ+ DDLLD E+ K
Sbjct: 179 ELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 233
>gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
Length = 322
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S + ++ +D ++ + L ++ + S GGK++R LV A
Sbjct: 6 IRSFIAQDMSIVDNVIREKLHSHVLLIRQVSEYIINS-------GGKRLRPALVILSAGA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F + + A IE IH +L+HDD+ +D +RR + T + + +++ G+ L
Sbjct: 59 FGYSGKFHYNLAAVIEFIHTATLLHDDV--VDESELRRNRETANALFGNAASVLVGDFLY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF+++ + + ++ LQ + ++ + + + K
Sbjct: 117 SRAFQMMVEVDNMRVMQVLADATNTIAEGEVLQLLNCRDPQVSEENY------LQVIRFK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L A GAI+ +A+ E+ + +G +LG FQL DD+LD D+ K
Sbjct: 171 TAKLFEAASRLGAILGNATSEEENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGK 225
>gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
Length = 324
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
IL + A T+ L + + Y L +GGK+IR L+ +L+ + + A
Sbjct: 6 EILKKINSHIADLKFTRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDIVRAYGPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++
Sbjct: 66 IGIEVYHNYTLLHDDL--MDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQYMAQCPA 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M + + E + + ++KT L+ + + G
Sbjct: 124 GYLKEVMDLFSLTALEICEGQQM---DMEFELRKDVKEGEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + E L FG NLGI FQL DDLLD D
Sbjct: 181 ALLGGASAEDAEHLYNFGMNLGIAFQLKDDLLDVYGDAA 219
>gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
Length = 300
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/236 (37%), Positives = 141/236 (59%), Gaps = 3/236 (1%)
Query: 3 GGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L ++ + + ++ LD +L +A+ + Q +RL++A+R+ +L GGK++R FLV E
Sbjct: 2 ADLKLQMAKIADAVNGWLDVELNADSAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVVE 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A+LF V+ AL A+EC+H +SL+HDDLP+MD+ +RRG+PTVH +DE AI+AG
Sbjct: 62 SAALFGVSLDDALPTACALECLHSFSLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILAG 121
Query: 121 NGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+I++S + ML+ G ++ +D + ++
Sbjct: 122 DALSTLAFDILASRSSADAAVRCELTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIRT 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q MKTGAL+ FACE+GA++ A + LR +GE +G+ FQLADD+LD D
Sbjct: 182 LQAMKTGALIRFACEAGAVLGGADDAARAALRSYGETVGLAFQLADDILDVTADTA 237
>gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12]
gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12]
Length = 293
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/234 (38%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
+ +R+D+ L+ ++ QT + +LL+AI++ ALLGGK+IR FLV + N+
Sbjct: 6 ITRYQQRVDSQLEKIIDA-----QTITDPKLLAAIKHGALLGGKRIRPFLVYAIGDMLNI 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L
Sbjct: 61 PLKKLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALG 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKT 185
FEII P ++ + ++ +L G GM GGQ +D+ + + K+KT
Sbjct: 121 FEIICEPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLHKLKT 180
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ A E I A S E+ L F + +G+ FQ+ DD+LD E+L K
Sbjct: 181 GALIRCAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLDIISSTEELGK 234
>gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
Length = 346
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A T+ L + + Y L +GGK+IR L+ +L+ +
Sbjct: 28 ELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPA 87
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ ++
Sbjct: 88 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPV 145
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + + + + ++KT L+ + + G
Sbjct: 146 EHLKEVMDIFSLTALEICEGQQL---DMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIG 202
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + E+L FG NLG+ FQL DD LD D
Sbjct: 203 ALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDTA 241
>gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
Length = 294
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + ++ +L H+ G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3]
Length = 302
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G + +E + L + + L A Y+L GGK+IR L E
Sbjct: 13 GEFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFEM 70
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ A+E IH +SLIHDDLP MD+ +RRG+P+ H + E A++AG+
Sbjct: 71 CRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAGD 130
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L YA + I + L GM+ GQ +D +F + +
Sbjct: 131 ALSAYAGKYICDSNLSAEKKTAMIKEL----YDRTLGMIEGQTIDTDGKFDTLDGLLSMY 186
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+MKT L+ A G I A A + + R + ++G+ FQ+ DD+LD +L K
Sbjct: 187 EMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244
>gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
Length = 324
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
D IL + + + L IRY L GGK+IR L +LF + + L
Sbjct: 5 DLILSKINAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MDN +RRGKPTVH ++D TAI++G+ +L A+++++
Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQCD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + Q M + E + + ++KT L+ A +
Sbjct: 123 AAKLKPVMELFTETALEIGEGQ---QYDMDFEHRNDVTEDEYIEMIRLKTSVLLACAMKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A A Q + + L FGE +G+ FQL DD LD D
Sbjct: 180 GALLADAPQRDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219
>gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
Length = 294
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 8/220 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
I+ L +++ + + + A+ Y+LL GGK++R L A +F+ +
Sbjct: 14 IEERLHNIIPEVDEYCLD-----IEQAMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVIN 68
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
G AIE IH YSLIHDDLP+MDN RRGK T H + E AI+AG+GLL A+EI+ +
Sbjct: 69 FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDGLLNMAYEIMIND 128
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--DIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ + + + G GM+GGQ++ +++ I+ ++ + ++KTGAL+
Sbjct: 129 AVESRNIEKMRAAGIVAKYAGALGMVGGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAP 188
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E+ A++ A + E E L + NLG+ FQ+ DD+LD E
Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228
>gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431]
Length = 299
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ + AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGKANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
Length = 298
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 128/243 (52%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + +T L L + + + + + + YALL GGK++R FL+
Sbjct: 1 MNSDFQVYLKEKTNFFETELKKELKELS------YPETIAKGMEYALLNGGKRLRPFLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N + ++ IE IH YSL+HDDLP++DN RRGK T H + E AI+
Sbjct: 55 TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114
Query: 120 GNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ LLTYAF ++S + ++++ + G+ GM+GGQM+DI+ E
Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLET 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E D
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
Length = 298
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 121/238 (50%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF+++S T+L + ++ L G GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLS-RPTELPAARQLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 178 RMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
Length = 319
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 18 TILDDLLLQTASHMQT-QHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRV 75
++D L +++Q + L A YA GGK++R LV + ++ A
Sbjct: 27 QVIDQLESDITAYLQACKLPSPLHEASLYAMTNGGKRVRPLLVAATFATVKTDNSLANPS 86
Query: 76 ----------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+EC+H YSL+HDDLP MD+ +RRG+PT HI Y E A++AG+ L T
Sbjct: 87 HQLSNDVRRAMMAVECLHGYSLVHDDLPCMDDDALRRGRPTTHIAYGEAAAMLAGDVLQT 146
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AFE ++ + L + M L+ + + + +T++ I + KT
Sbjct: 147 LAFEALTHTYFGENSEFATPLSATFAPRARRMVMGQMLDLNGEHQQLSQTELEAIHRDKT 206
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ + GAI A+A+ +E++ L F + +G+ FQ+ DD+LD D
Sbjct: 207 GALIEASVLMGAICANATDSERQALSSFAQQIGLAFQVQDDILDVTADTE 256
>gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 299
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/242 (37%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFMQQLQACVSQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF IIS P ++ D R ++ L + G+ GM GGQ L + I +
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGHQISLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 305
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 11/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L ++ L+ L + RL SA+ Y+L GGK++R L
Sbjct: 8 FDFDGYLASRRSWVEEALERLCSSR----PKRVPSRLWSAMVYSLTAGGKRLRPVLCLMA 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A F + + + A E IH SLIHDDLP MD+ +RRGKPT H+ + E A++AG+
Sbjct: 64 AEAFGLEGQRVMPLALAFEMIHTASLIHDDLPCMDDDDLRRGKPTNHVVFGEAMALLAGD 123
Query: 122 GLLTYAFE-----IISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDET 175
LL AFE ++++ + ++ + T G+ G + + +
Sbjct: 124 ALLALAFESAIEGLMANHFSGELISLAVMSLAKATGPSGICGGQSMDMGFEDMGQLGPDR 183
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+V + + KTG L+ + E GAIMA A ++ +R +G LG FQ+ADD+LD
Sbjct: 184 RVMEVARSKTGVLIASSLEGGAIMAGADEDALSNVRGYGMALGKAFQVADDILDVTG 240
>gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
Length = 282
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
I+ ++ + + ++ A++Y+LL GGK+IR L+ + +N+ L
Sbjct: 3 QIIQEINTRLIKITDCFQDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAA 62
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE IH YSLIHDDLP MDN +RRGKPT H Q+DE TAI+AG+GLL A +I
Sbjct: 63 CAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVILKANY 122
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I +L + + + +++ + ++ +I KTG L+ + + G
Sbjct: 123 NSELKIALLSILYQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDLISASMQMG 182
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++A+ + + E + G +G+ FQ+ DD+LD +
Sbjct: 183 ALVANVN--DLETFKEIGYKIGLAFQIQDDILDVVGNSE 219
>gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
Length = 330
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ + I+ L + + L + I Y L LGGK++R L A +F
Sbjct: 6 DMQNIEQYQKSFLNYLEDFAIDKQPNNLYAPINYILKLGGKRLRPVLTLMTAEVFGEEAK 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ ++E H +SL+HDD+ MD +RRGK TVH +++ T I++G+ +L A+++
Sbjct: 66 NAMNAALSVEVFHNFSLVHDDI--MDEAPLRRGKKTVHEKWNLNTGILSGDAMLILAYQL 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + L + + + + + + + KT L+
Sbjct: 124 ---FENYEPETFLALAKLFSKTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVG 180
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + GAI+A AS ++ + FG LG+ FQL DD LD +
Sbjct: 181 AAMKMGAIVAKASAEDQNAIYDFGSYLGVAFQLQDDYLDAFGNPE 225
>gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329]
Length = 294
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV
Sbjct: 1 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 52 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + ++ +L H+ G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTIIADGTLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
Length = 288
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+Q++ +I+ LD L + RL+ A+RYA LGG K++R+ LV
Sbjct: 1 MQQHQAQIELALDKRLTAQKQ----PGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGA 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + AA+E IH YSL+HDD+P MD+ +RRG+PT H +DE TA++ G+ L T A
Sbjct: 57 NPVALDAAAAAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE + + L+ L+ + +D + + K+KTGA
Sbjct: 117 FETLCDNSLTAAQQVLMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLKTGA 176
Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + GA+ A +RL + + +G+ FQ+ DD+LD D
Sbjct: 177 LIRASVLLGALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIADTE 225
>gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase
[Methanosarcina barkeri str. Fusaro]
gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosarcina barkeri str. Fusaro]
Length = 321
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L ++++ S +D +D+LL H + L A RY + GGK++R ++ A
Sbjct: 2 TLVDEIKKRSVHVDAAIDELL-------PVAHPEELYKASRYLVDAGGKRLRPAVLILAA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L A+E +H ++LIHDD+ MD IRRG P VH + + AI+AG+
Sbjct: 55 EATGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDDIRRGMPAVHTIWGDAGAILAGDT 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFEI+S + + ++ ++S T +G + +++ + + +
Sbjct: 113 LYSKAFEILSKVQNEPARILKCMDVISKTCTEICEGQWLDMDFEKREKVSK-AEYIEMVE 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
KT L A + GA++ AS L +G +GI FQ+ DD+LD
Sbjct: 172 KKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLD 218
>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 305
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++L ++ + ++ L + A++Y++ GGK++R L+ E
Sbjct: 10 DINNELIVRAEAAEDVVIRFLPDVEGL-----QSSIFDAMQYSVTAGGKRLRPILMNETF 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF AAIE IH YSL+HDDLP+MDN +RRGKPT H Y E ++AG+
Sbjct: 65 TLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDNDSLRRGKPTTHAVYGEAMGVLAGDA 124
Query: 123 L-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQV 177
L +++ + ++ M L G+ GM+GGQ + + + + ++
Sbjct: 125 LLNYAFETALNAYDADIDTVRVTEAMRILARKAGVFGMIGGQVVDVESEKKQLEMTKEKI 184
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A GA++A A++ + + + +G+ FQ+ DD+LD D
Sbjct: 185 DFIYELKTGALIEAAMMIGAVLAGATEQQVTTVENVAKKIGLAFQIQDDILDVIGDEA 242
>gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12]
gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
Length = 290
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
++ + + L+++L Q + + ++YA L GGK+IR L+ +L
Sbjct: 1 MRNYREYFNEKLEEILAQYNT------PVWIAEGMQYACLQGGKRIRPQLLFMSLALLGK 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L A+E IH YSL+HDDLP+MDN RRG+ T H ++ E AI+ G+ LLT A
Sbjct: 55 EIALGLPFALALEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNA 114
Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
F ++ ++ +++ + G+ GM+GGQ +D+ + I + I + K
Sbjct: 115 FSVMVRGSMGKVSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
TG L+ I+ AS +++ L +G N+G+ FQ+ DD+LD E D
Sbjct: 175 TGRLLLLPILVACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGD 223
>gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1]
gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1]
Length = 299
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
P +L+ K+ + L + N ++ ++Y ALLGGK++R FLV
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT H+++ E AI+AG+
Sbjct: 57 HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I+S ++ D R ++ L G+ GM GGQ LD + + + +
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ GA+ A + L + E++G+ FQ+ DD+LD D L
Sbjct: 177 IHRHKTGALIRATVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236
Query: 236 KK 237
K+
Sbjct: 237 KR 238
>gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 324
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FKQHLHEDLDKVNVVINQAVKSDVALI-SQIGTYIISA------GGKRLRPIITILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMKILEVMADATNIIAEGEVMQLMNIGNTDITE------KQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ A+ +++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
SK2]
Length = 302
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 115/234 (49%), Gaps = 11/234 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
L R++ LD L ++ RL A+RYA L GGK+IR LV
Sbjct: 10 AALNQLTDTAKARLEQALDHYLPAHSA------ASRLSHAMRYAALSGGKRIRPLLVYGA 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+AG+
Sbjct: 64 AQLAGAPLAKADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQPTCHKAFDEATAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
L T AFE+++ + S + G+ GM GQM D+ Q + +
Sbjct: 124 TLHTRAFELLACHGDYRDGSRISLIQHL-CQAAGVDGMAAGQMQDMLAQGQQQTVAALEE 182
Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +KTG L+ + + G +A + L FG+ +G+ FQ+ DD+LD
Sbjct: 183 MHYLKTGRLITASLQLGYFVAEKDDPSLLANLTEFGDAIGLAFQIQDDILDVTA 236
>gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 353
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + R+D +++ + + + +Q ++SA GGK++R +
Sbjct: 37 FQQNLAADLGRVDVVINRAVQSEVALI-SQIGTYIISA------GGKRLRPVITILSGRA 89
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 90 LGCDNDGLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 147
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + + Q + + K
Sbjct: 148 TRAFQLMVGSGSMKILEVMADATNIIAEGEVMQLMNIGNIDITE------AQYLQVIQYK 201
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+A AS ++ LR +G +G FQ+ DD+LD D
Sbjct: 202 TAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGDPE 252
>gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
Length = 321
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 20/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + +Q +++D ++ + L ++ +Y + GGK++R LV
Sbjct: 1 MIEAIRACVQSEVEQVDQLIIEQLHSDVDMVENVG--------QYIVDAGGKRLRPLLVL 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +R A +E IH +L+HDD+ +D +RRG+PT + + +++
Sbjct: 53 LAGEALGGCTESHIRFSAVVEFIHTATLLHDDV--VDVSTLRRGRPTANEAFGNAPSVLV 110
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF+++ + ++ LQ G + +Q
Sbjct: 111 GDFLYTRAFQLMVQLDNMDLLRHMADTTNTIAEGEVLQLARAGNPDIDE------SQYID 164
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L AC+ A++A+ ++ L +G NLGI FQ+ DD+LD E D K
Sbjct: 165 VITRKTAILFASACQGAAMLANCDIKTQQALSQYGLNLGIAFQMIDDVLDYEGDPTVTGK 224
>gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
Length = 296
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 10/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
M S + +R++ LD+LL RL A+RYA+LGG K++R+ L
Sbjct: 1 MT-DFQSWARHTQQRMEHTLDNLLPA-----SYIAPTRLHEAMRYAVLGGGKRVRALLAH 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++
Sbjct: 55 AAGELCGAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
G+ L T AF+ +++P + +++ L G +GM GGQ +D+ +++++
Sbjct: 115 GDALQTLAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSEL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA A+ Q + + + +G+ FQ+ DD+LD E D
Sbjct: 175 EYMHIHKTGALIRAAALLGAHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEADSE 233
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 124/237 (52%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+L E + +D L+ LL ++ A+RY++ GGK+IR L E
Sbjct: 7 EFQDQLNEYIQLVDRELERLLPDED-----ILQKSVVDAMRYSVTAGGKRIRPVLTLEVC 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AL A+E IH YSLIHDDLP MD+ +RRGKP+ HI + E TA++AG+
Sbjct: 62 RMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDA 121
Query: 123 LLTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
LLT AFE S + + L+ G+ GM+GGQ++D++ E
Sbjct: 122 LLTLAFETASHAPQTHGTGCEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLH 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ AC+ GA A A + + +++ + + LG+ FQ+ DD+LD D
Sbjct: 182 QMHLLKTGALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEA 238
>gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8]
gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Marinobacter aquaeolei VT8]
Length = 322
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + ++ R++ ++ L ++ + S GGK++R LV
Sbjct: 1 MTAQRIYDTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIES-------GGKRLRPLLVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++
Sbjct: 54 LASQAAGYQKDDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE++ ++ N+ S + +Q M + Q +
Sbjct: 112 GDFLYARAFEMMVELQSLPIMNVLSHATAVIAEGEVMQLMNVKNPDLSE------DQYMV 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A +GA++A AS+ ++ L+ +G++LG+ FQL DD+LD + D
Sbjct: 166 VIHNKTAMLFEAASHTGALLAKASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAE 221
>gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640]
gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06]
Length = 324
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + + S GGK++R +
Sbjct: 8 FQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas sp. SM9913]
gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas sp. SM9913]
Length = 295
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +++ + L+ Q + ++ + A Y+++ GGK++R FLV
Sbjct: 2 SIKEQIKLAQDDVANTLNLYFEQ-----PLESDNTIKEATHYSVMNGGKRLRPFLVYTTG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AAIECIH YSL+HDDLP+MD+ +RRG+PT HI Y E AI+AG+
Sbjct: 57 KILGADKRDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIVYGEAQAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLDIQDEFIDETQVFMI 180
L T AFE+I+ + + +++ +L H GLQGM+ G+ + D+ I ++ I
Sbjct: 117 LQTLAFELIAKHTFKCSTEAQLKMIAALAHASGLQGMVAGQGRDIAATDKVITVDELERI 176
Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K+KTGAL+ A GA+ A + SQ + L FG +G+ FQ+ DD+LD E D L K
Sbjct: 177 HKLKTGALINCAITLGALCAPNTSQQTLDNLSTFGYAIGLAFQVHDDILDVEGDTLTLGK 236
>gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 11/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L + ++ + IL +L + L A+RY+ L GGK++R LV
Sbjct: 1 MN-DLKVWQNQAVEQAERILQTVLP-----ISQVAPQTLHEAMRYSTLDGGKRLRPLLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L N AA+ECIH YSL+HDD+P+MDN +RRGKPT H+Q+ E TA++
Sbjct: 55 AASELGNQVQAACEAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L T AF+I+S +T+L + +++ L G GM GGQ +D+ + D +T++
Sbjct: 115 GDALQTLAFDILS-TETELSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTEL 173
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A G + + + L + LG+ FQ+ DD+LDCE D
Sbjct: 174 EFMHSLKTGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTA 232
>gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
Length = 331
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 12 LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 65
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L
Sbjct: 66 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 123
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + +++ LQ QD E + + K
Sbjct: 124 ARSFQLMVETGSLRVMDILANASATISEGEVLQL------TAAQDLRTTEDIYLQVVRGK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A + G ++A + + E L +G+ LGI FQ+ DDLLD
Sbjct: 178 TAALFAAATQVGGVVAGMPEAQVEALHAYGDALGIAFQIVDDLLDYGG 225
>gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_APKG6D3]
Length = 283
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 16/229 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+N L K+I+ +LD S ++ ++YAL GGK+IR ++
Sbjct: 8 INPLLEKY-SAYIKKINNVLD-------SELELYTESEFKEPLKYALGGGKRIRPIILLL 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L AIE +H S+IHDD+ +DN +RR K HI+Y T+++ G
Sbjct: 60 ASECVGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNTSVLTG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L I S + + ++ ++ E + +
Sbjct: 118 DFVLGLILNIASRINNPRVTKNLATTAMMMSEGEVIES------RLEASEDVTFDDYLKV 171
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KT A GAI++ ++ E E L +G+N+GI +Q+ DDLLD
Sbjct: 172 IEYKTATAFETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLD 220
>gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 291
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
P + R + LD LL T RL +A+R+A LGG K++R LV +
Sbjct: 3 PEVFTRWAARTEATLDRLLPA-----DTAEPRRLHAAMRHATLGGGKRMRPLLVYAAGTA 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + AA+E +H YSL+HDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L
Sbjct: 58 LGADEASLDLPAAAVELVHAYSLVHDDLPAMDDDDMRRGRPTVHVAFDEATAILAGDALQ 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE ++ + L+ G +D + + + +K
Sbjct: 118 TLAFEALADAAAPAELRAGWMQSLARASGAGGMCGGQALDIDATGSQLPLEALQRMHSLK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ A GA+ A A + +L + + LG+ FQ+ DDLLD E
Sbjct: 178 TGALIRAAVRMGALGAGADEARLRQLDRYADALGLAFQVRDDLLDIEASSE 228
>gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76]
gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399]
gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385]
gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76]
Length = 298
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 124/238 (52%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E TA++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF+++S T+L + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
Length = 294
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/237 (35%), Positives = 131/237 (55%), Gaps = 6/237 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+G + L+ + ++ L++L+ + L A+RY LL GGK+IR L
Sbjct: 1 MDG-FKAILKSKAAELENSLEELMELKEDEL----APELSEAMRYTLLSGGKRIRPILTL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L ++ AL+ G+A+E IH YSLIHDDLP+MD+ +RRGK T H+ + E AI+A
Sbjct: 56 LTTELLKGDYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLTYAFEI+S + + I+ +++ + +D + + + ++
Sbjct: 116 GDALLTYAFEILSELELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQK 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KTGAL+ + SG + S+ EKE L+ + ENLG++FQ+ DDLLD D K
Sbjct: 176 IHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEK 232
>gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10]
Length = 348
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++T++ L S + Q + ++SA GGK+IR LV A
Sbjct: 30 NNIAHTIAADMDAVNTVIRRKLHSEVSLVN-QIAEYIISA------GGKRIRPVLVLLVA 82
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 83 NAYSYKGTAHHELAAVVEFIHTATLLHDDV--VDESSLRRGRATANALFGNAASVLVGDF 140
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ I S + LQ + D + + + + +
Sbjct: 141 LYSRAFQMMVGLNNMRVMQILSDATNVIAEGEVLQLLNM------HDPDVSQERYLQVIR 194
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT L A E GA+++ A+ + E +G +LG FQL DD+LD D
Sbjct: 195 SKTAKLFEAAAELGALVSGANDAQIEAAGEYGRSLGTAFQLIDDVLDYAGDA 246
>gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18]
gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18]
gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136]
Length = 298
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + Q + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF+++S T+L + ++ L G +GM GGQ +D + + + +
Sbjct: 119 DALQTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA S E L + LG+ FQ+ DD+LDCE D
Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235
>gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 324
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + R++ ++ + + + +Q ++ A GGK++R +
Sbjct: 8 FQKNLATDLGRVNQVVGRAVQSEVALI-SQIGSYIIGA------GGKRLRPIITILAGKS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 LGYDGDPLYSLAAMVEFIHTSTLLHDDV--VDESDMRRGRETANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + T+ + + K
Sbjct: 119 TRAFQLMVGSGSMKILEVMADATNIIAEGEVMQLMNIGNTDISE------TEYLRVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+A AS ++ LR +G +G FQ+ DD+LD D
Sbjct: 173 TAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDILDYCGDPA 223
>gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
And Isoprenyl Pyrophosphate
Length = 303
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + + R+D L + + RL A RY++ GGK++R L
Sbjct: 9 SLTAYQASSQARVDAAXHTLFTAPSPELA-----RLYEAXRYSVXNGGKRVRPLLAYAAC 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
A A+E IH YSL+HDDLP+ D+ +RRG+PT H +DE AI+AG+G
Sbjct: 64 EALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHKAFDEAXAILAGDG 123
Query: 123 LLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
L + AF + + + +R L+ L +D+ +
Sbjct: 124 LQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLGSVGLKLDQQALEY 183
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGAL+ + GA+ + A + E + L+ + + +G+ FQ+ DD+LD E D L
Sbjct: 184 XHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030]
gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030]
Length = 295
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S + N+++++ L+ L L+ A++Y LLGGK++R FLV
Sbjct: 2 MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+
Sbjct: 53 ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF II+ + ++ +L H+ G GM GQ L ++ + +
Sbjct: 113 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 172
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGAL+ A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 173 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 232
>gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1]
gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1]
Length = 324
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + L I Y L LGGK++R L A +F + AL A+
Sbjct: 9 DTFISYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAV 68
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +L A+++ +
Sbjct: 69 EVFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLILAYQL---FENYKG 123
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
R+ L I + + + + + + KT L+ A + GA++
Sbjct: 124 KTFRALAELFSKTAIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGALV 183
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A AS+ + + + FG LG+ FQL DD LD D
Sbjct: 184 AEASEKDAQGIYDFGRYLGLAFQLQDDYLDAYGDPE 219
>gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
SWAT-3]
gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
SWAT-3]
Length = 294
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S N+++++ LD L N L++A+RY LLGGK+ R FLV
Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRG T HI++DE TAI+
Sbjct: 52 ITGEMLGCTAEELDTPASAVECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ ++ R +++ L G QGM GQ ++ ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLKE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVLPQLDKYADAIGLAFQVQDDILDIIGDTE 231
>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius ATCC
35311]
gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase (farnesyldiphosphate synthase)/
geranylgeranyl pyrophosphate synthetase [Melissococcus
plutonius ATCC 35311]
Length = 296
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN Q++ RI+ + + + S + L A+ Y++ GGK++R L+
Sbjct: 1 MN-DFTIFKQKHIDRIEKEMANFIESHTS------DQSLKKAMLYSIQAGGKRLRPLLLL 53
Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ FN A + AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+
Sbjct: 54 ATINSFNCPIEQGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GLLT AF++++ + I +L T L + + ++ ++
Sbjct: 114 AGDGLLTGAFQLLALSTIEAGKKILLTQLLGQTAGTEGMVAGQSGDLQGEKKALNLQELS 173
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ + KTGAL+ F+ +G I+A+ S+ L+ G+ FQ+ DDLLD K+
Sbjct: 174 EVHRKKTGALIEFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQ 232
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + I+ L ++L Q ++L ++ Y+L+ GGK+IR L
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNS-----PNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+ECIH YSL+HDDLP+MDN RRG T H Y E AI+AG+GL
Sbjct: 57 MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++++ T + + + G +GM+GGQ D +D+ I ++ ++
Sbjct: 117 LTYAFQLMT-SNTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL + E G I+ A+ + L + LG++FQ+ DD+LD +L K
Sbjct: 176 TGKTGALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGK 233
>gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
Length = 332
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 16/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + L + + ++T++ + M ++H R+ + + GGK++R L A
Sbjct: 13 LAATLSDEMEAVNTLIQ-------TRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAR 65
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 66 LCGYEGAHHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +F+++ + +I + ++ LQ + + + + +
Sbjct: 124 FSRSFQLMVETGSLQVLDILANASATIAEGEVLQMTAASNLATDEAVY------LQVVRG 177
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL A + G ++A A + + + L +G+ LGI FQ+ADDLLD + D
Sbjct: 178 KTAALFSAATQVGGVIAAAPETQIKGLFDYGDALGIAFQIADDLLDYQGDAA 229
>gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase;
Geranyltranstransferase (farnesyldiphosphate synthase);
Geranylgeranyl pyrophosphate synthetase [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 306
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+L + +R++ L D + N L+ A+RY A+LGGK++R +LV
Sbjct: 9 DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F ++ + AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+AG+
Sbjct: 64 QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AF I++ P + D R ++ L H G+ GM GGQ L + I +
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQITLDDLEK 183
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDL---P 235
I + KTGAL+ A GA+ A A L + +G+ FQ+ DD+LD D
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGALGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243
Query: 236 KK 237
K+
Sbjct: 244 KR 245
>gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
43768]
gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
43768]
Length = 324
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586]
gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586]
Length = 303
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/245 (34%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M +L + +RID L+ + + L+ A+ + ALLGGK++R FLV
Sbjct: 1 MT-DFLKQLAAHHQRIDAALNHFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF V+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A
Sbjct: 55 TTGQLFAVSPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ P + D R ++ L G+ GM GGQ L + +D
Sbjct: 115 GDALQTLAFSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQT 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ + GA+ A L + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPYLDRYANAVGLAFQVQDDILDVIGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62]
gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62]
Length = 281
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 126/231 (54%), Gaps = 16/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + + + RI+ +D +L +D L+ + +AL GGK R+FLV E + L
Sbjct: 4 FKTAMADAASRIEARIDQVLTP---------DDPLIEPMGHALRGGKMFRAFLVLEGSRL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V+ AL AIECIH YSL+HDDLP MD+ +RRG+PTVH ++DE TA++ G+ L
Sbjct: 55 HGVDEAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEATAVLVGDNLQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF++I+ P L++ ++G + + + Q+ +Q+ K
Sbjct: 115 SLAFQLITGPGLGGA----IAQRLAVDARTMVKGQMLDIAAETAATPLTLDQIIELQQHK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ +A +G +MA A + + + LG+ FQ+ADDLLD E D+
Sbjct: 171 TGALIKWAAVAGPLMAGAD---IGPMSRYADALGLAFQIADDLLDVEGDVA 218
>gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
18228]
gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
18228]
Length = 327
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 15/232 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E KRI ++ L ++ L I Y L LGGK++R L+ +L+ +
Sbjct: 7 EELMKRIHAYIEQL-------SYSREPKGLYDPIEYVLALGGKRLRPVLMLLAYNLYRED 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE H ++L+HDDL MDN +RRGKP VH +++E TAI++G+ +L ++
Sbjct: 60 VESIFSQAAGIETYHNFTLLHDDL--MDNADMRRGKPVVHKKWNENTAILSGDAMLILSY 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + + ++ + + D + + + ++KT L
Sbjct: 118 QFMMNQCPPEHVQEVMEIFGRTALEVCEGQQWDMEFESRNDVTV--GEYIEMIRLKTSVL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ A + GA++ AS + ++L FG +G+ FQL DD LD + KK
Sbjct: 176 LAAALKIGAVLGGASSADAQKLYDFGIRMGLAFQLQDDYLDVYGNPAVFGKK 227
>gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7]
Length = 303
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 13/239 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L +L+E + I+ +L+ +L + A +T + SA+RY+L GGK+IR L+ E
Sbjct: 3 LEQELKEKTADIEKLLERMLPEEAGLQKT-----IFSAMRYSLMAGGKRIRPLLIAETYR 57
Query: 64 LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A AAIE IH YSLIHDDLP++DN RRG+ T H Y E AI+AG+
Sbjct: 58 FFGGTDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTH----NIGLQGMLGGQMLDIQDEFIDETQV- 177
LL YAFE S +D+ ++ G+ GM+GGQ++D++ +
Sbjct: 118 LLNYAFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKT 177
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A GA +A AS + + ++G+ FQ+ DD+LD +
Sbjct: 178 LRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIGNEA 236
>gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
Length = 324
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A + L + Y L +GGK+IR L+ +L+ + +
Sbjct: 6 ELLEKINSHIADLQFVRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M + + E + + ++KT L+ + + G
Sbjct: 124 GHLKEVMDLFSLTALEICEGQQM---DMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + ERL FG N+G+ FQL DDLLD D
Sbjct: 181 ALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219
>gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399]
gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149]
gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33]
Length = 324
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
Length = 324
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ R++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLSRVNEVINKAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------AQYVQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ +A ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 290
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
++ LD+ L + RL+ A+R+A+LGG K++R FL E A L + AL
Sbjct: 1 MEVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALA 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
G IE +HCYSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ LLT AFE+++ P
Sbjct: 61 AGGGIELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAFDEATAILAGDALLTLAFELLADP 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI------QKMKTGAL 188
Q IR+ L+L L GL GM+GGQ+LD+ E + Q MKTGAL
Sbjct: 121 AWQPDAGIRADLVLGLARAAGLGGMVGGQLLDLGAEGRFGEAALDVDATLQLQAMKTGAL 180
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + E+GAI+ A ++ L +G LG FQ+ADD+LD E K+
Sbjct: 181 LAVSVEAGAIVGGADAEQRAALLAYGRALGQAFQVADDILDREASAEAMGKR 232
>gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
Length = 346
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A T+ L + + Y L +GGK+IR L+ +L+ +
Sbjct: 28 ELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPA 87
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ ++
Sbjct: 88 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPV 145
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + + + + ++KT L+ + + G
Sbjct: 146 EHLKEVMDIFSLTALEICEGQQL---DMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIG 202
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + E+L FG NLG+ FQL DD LD D
Sbjct: 203 ALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDAA 241
>gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
Length = 323
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
E R I+ D + + + L + Y + GGK++R +V +F +
Sbjct: 2 EFLDRYQQIVADAITK---YTFKDKPSELYEPMNYIISHGGKRLRPIMVLMACEMFGGDL 58
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A++ AIE H ++LIHDD+ MD +RR KPT+H + I++G+GL
Sbjct: 59 KEAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNVGILSGDGL------ 110
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + K + GQ DI E + +M T
Sbjct: 111 MLKAYKFFEDLEPEIFKACIRIFTHTGLLLCEGQQYDINFETQKDVTFDDYIRMITYKTG 170
Query: 190 CFAC---ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ E GA++A A + + + FG+++GI FQ+ DD LD D KK
Sbjct: 171 VLSASSFEIGALIAKADFKDAKAIFNFGKHIGIAFQIMDDYLDVFGDQAQFGKK 224
>gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1]
Length = 333
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ L E+ ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 16 AWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARLCG 69
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L
Sbjct: 70 YEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFAR 127
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + +I + +++ LQ QD E + + KT
Sbjct: 128 SFQLMVETGSLRVMDILANASATISEGEVLQL------TAAQDLRTTEDIYLQVVRGKTA 181
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
AL A E G ++A + + E L +G+ LGI FQ+ DDLLD
Sbjct: 182 ALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227
>gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13]
gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13]
Length = 306
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+LQ +R D L D + + +++A+R+ ALLGGK++R FLV
Sbjct: 8 AAFSEQLQAFRQRADRALLDFIAPL-----PFNEGNMVAAMRHGALLGGKRLRPFLVYTT 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E +AI+AG+
Sbjct: 63 GQMFGVSLNNLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEASAILAGD 122
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ + R ++ L G GM GGQ L+ + ID +
Sbjct: 123 ALQTLAFSILADADMPDVALRDRLAMVSELATASGAAGMCGGQSLDLEAEGRQIDLPALE 182
Query: 179 MIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+I + KTGAL+ A GA+ A + +L + +G+ FQ+ DD+LD + K
Sbjct: 183 LIHRHKTGALIRAAVRLGALAAGEPGRAALPQLDRYAAAIGLAFQVQDDILDVVGETEK 241
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 12/242 (4%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
MN + + I+T+L D L + + ++ A+ Y+LL GGK++R L
Sbjct: 1 MNSKNDFDIQCSRKVQEIETVLQDYLPRQKGY-----QSIIMEAMSYSLLAGGKRLRPML 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ E LFN AAIE IH YSL+HDDLP+MDN RRG+ T H+ Y E I
Sbjct: 56 MKETYDLFNGRSKALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGI 115
Query: 118 IAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+AG+ LL YAFE + + + + L G+ GM+GGQ++D+++ D +
Sbjct: 116 LAGDALLNYAFETAFKAFVTEPEDSLLIGRALGVLGEKAGIYGMIGGQVIDVRETGRDIS 175
Query: 176 QV--FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ I ++KT AL+ A GAI+ AS+ E + + N+GI FQ+ DD+LD
Sbjct: 176 KEVLDTIYELKTAALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDVVSS 235
Query: 234 LP 235
Sbjct: 236 SE 237
>gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 324
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A + L + Y L +GGK+IR L+ +L+ + +
Sbjct: 6 ELLEKINSHIADLQFIRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ AI++G+ +L A++ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M + + E + + ++KT L+ + + G
Sbjct: 124 GHLKEVMDLFSLTALEICEGQQM---DMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + ERL FG N+G+ FQL DDLLD D
Sbjct: 181 ALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219
>gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 325
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
QE + ++ L D+ +++ + A GGK++R L+ A + N+
Sbjct: 5 QEIFEFVEKDLADIERALEANLNPYLDLVRDVASHLLFAGGKRLRPVLMVLSARVCGCNN 64
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + E +H +L+HDD+ +D RRGK H +D ++ G+ LL+
Sbjct: 65 GEEINLSTVFEYLHAATLLHDDI--VDGAETRRGKIAAHKVWDPAEVVLTGDFLLSRTCT 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I + + + + ++ Q + ++ + Q + KT L+
Sbjct: 123 IAADTDKLPIIKVITNVTGVMSEGEIQQLLNKKRLDLSE------EQYMDVIYRKTAVLI 176
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
ACE GA++A A + E L+ +G +LGI FQ+ADDLLD D K
Sbjct: 177 SAACEVGALLADAPPEQVEALKEYGRHLGIAFQMADDLLDYVADPKVTGK 226
>gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
Length = 322
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEIYMDVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A +A AS ++E LR FG++LG+ FQL DDLLD + D
Sbjct: 170 KTAMLFEASTHSAAALAGASDEQREALRTFGDHLGVAFQLVDDLLDYKGDSE 221
>gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 322
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++ +++ + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQLSRVRDASTSEEVYME------VIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 170 KTAMLFEASTHSAAALAGATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 287
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++L E ++ L+ + + L A+RYA+ GGK++R+FLV E A L
Sbjct: 1 MQARLAEIRPLVEAELN-------AAIDALPAGDLSDAMRYAVQGGKRLRAFLVMESARL 53
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ +L V AA+E +H YSL+HDDLP+MD+ +RRG+PTVH+++ E TAI+AG+ L
Sbjct: 54 HGLDDDASLPVAAAVEALHAYSLVHDDLPAMDDDDLRRGQPTVHVKWTEATAILAGDALQ 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF++++ P+ + + + G + + + I +++
Sbjct: 114 TLAFQLLADPRVGDDAARMRLVGSLAQASGAAGMVWGQALDIAAETSGVPLDLDAIIRLQ 173
Query: 185 TGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G FA +G +MA A L + + +G+ FQ+ADD+LD E
Sbjct: 174 GGKTGALIRFAATAGPLMAGADP---AALDDYAQAVGLAFQIADDILDVEG 221
>gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
Length = 298
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ L L R++ LD L ++ +L A+RY+ L GGK++R L
Sbjct: 1 MSNALKDYLDFCQNRVERALDARLPS-----ESILPQKLHRAMRYSTLDGGKRMRPMLTY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A+E IH YSLIHDDLP+MD+ +RRGK T H+ +DE TAI+
Sbjct: 56 CTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKATCHVAFDEATAILT 115
Query: 120 GNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
G+ L AFEI+++ + R +++++LT G QGM+GGQ +D + +
Sbjct: 116 GDALQALAFEILANDPSITATAEGRLKMIIALTKASGSQGMVGGQAIDLESVGTKLTLPE 175
Query: 177 VFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ + + A + ++L + + +G+ FQ+ DD+LD E D
Sbjct: 176 LENMHIHKTGALIRASVNMATLAKADIDPDVAKKLDNYAKCIGLSFQVKDDILDEESDTA 235
>gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587]
gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587]
Length = 294
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013]
gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196]
Length = 324
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
Length = 311
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 135/233 (57%), Gaps = 13/233 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+ L + L + L++A+R+ +L GGK++R LV E A+LF V A+
Sbjct: 20 EQRLIEALADAPLEGERTRPSHLMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAITA 79
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+EC+HCYSLIHDDLP+MDN +RRG+PTVH+ + E TAI+AG+GLLT AF++++
Sbjct: 80 AAALECVHCYSLIHDDLPAMDNDLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGED 139
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---------IQDEFIDETQVFMIQKMKTG 186
+R L+ L G+ GM+GGQMLD + + E + +Q MKTG
Sbjct: 140 AHPDAQVRIALVRLLARASGIGGMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTG 199
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AL+ E GA++ A + L +G LG+ FQ+ADD+LD E D L K
Sbjct: 200 ALLRAGVEMGALLGGADAEARAALAAYGTALGVAFQIADDILDIEGDAAALGK 252
>gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54]
Length = 321
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +D ++ + L ++T + + GGK++R +V
Sbjct: 1 MNLPALIAPIVDDMKAVDAVIRERLNSDVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + +I S+ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEADSMRIMSILSEATTVIAEGEVLQLL------NVHDPDVSQERYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A A+ ++ +G ++G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGK 225
>gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative
[Heliobacterium modesticaldum Ice1]
gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative
[Heliobacterium modesticaldum Ice1]
Length = 320
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 15/235 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L ++Q + +++ L + + + + L GGK++R V
Sbjct: 1 MQFQLFHEIQADLAKVEAELQKYVDTSLPTLTAASSHLLH-------AGGKRLRPAFVLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N L + A+E IH +L+HDD+ +D RRG PTV ++ ++ G
Sbjct: 54 AGKFHNYALERLLPLAVALELIHMATLVHDDV--VDESKTRRGIPTVRARWGNRISLHTG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + +IS + +++ + + Q D
Sbjct: 112 DHLFARSLLLISELNDPAMTAVLAKISVEMCEGEIQQME------ATYDVHQTFRDYLYR 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K KT L+ +C+ GA+ A + L+ +G +LG+ FQ+ DD+LD D
Sbjct: 166 IKRKTALLIAASCQLGAMAVKADPSAVRALKMYGHHLGMAFQITDDILDMTADEK 220
>gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
Length = 324
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
D IL + + + L IRY L GGK+IR L +LF + + L
Sbjct: 5 DIILSKINDYIEALPFNRKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAP 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+E H Y+L+HDDL MDN +RRG PTVH ++D TAI++G+ +L A+++++
Sbjct: 65 ACGLETYHNYTLLHDDL--MDNAALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQCD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + Q M + E + + ++KT L+ +
Sbjct: 123 SSKLKPVMELFTETALEIGEGQ---QYDMDFEHRNDVTEDEYIEMIRLKTSVLLACGMKM 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A A Q + + L FGE +G+ FQL DD LD D
Sbjct: 180 GALLADAPQQDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR--SFLVTE 60
L K ++ L+ + ++ +++ ++RY++L K R +
Sbjct: 78 FDLRRYWNSVRKEMEAELE-------KSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIA 130
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ AL A+E +H SLIHDDLP MD+ IRRG+P+ H + A++AG
Sbjct: 131 ACEAVGGSKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAG 190
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
+ L FE I S + + + +++ + +G QGM+ GQ +D+ ++
Sbjct: 191 DALFPLGFEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLV 250
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
I + K G + + +G I+ A+ E ERLR +G ++G+++Q+ADD+L
Sbjct: 251 EFIHERKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDIL 301
>gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4]
gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4]
Length = 283
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 116/219 (52%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L +LL + +LL+A+R+A+L GGK++R FLV E A LF+ ALRVGAA
Sbjct: 2 LTELLQPEPLSDEIARPGQLLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGAA 61
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+EC+HCYSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ LLT+AFEII+SP+T L
Sbjct: 62 LECLHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTTL 121
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCFACESG 196
D ++ L+L+L GL GM GGQ LD+ E +V ++ Q MKTGAL+ FACE+G
Sbjct: 122 PDAAKTALVLALARAAGLGGMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEAG 181
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++A AS ++ERLR FGE +G FQLADDLLD D
Sbjct: 182 PVIAGASNEDRERLRQFGELIGRAFQLADDLLDLTADAA 220
>gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From
Rhodobacter Capsulatus Sb1003
gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From
Rhodobacter Capsulatus Sb1003
Length = 298
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L+E ++T + A+ + L A+ YA GGK++R+FL E A++
Sbjct: 4 FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L
Sbjct: 57 HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE+ + P +N + + + + G + + + I +++
Sbjct: 117 TLAFELCTDPVLGSAENRVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQ 176
Query: 185 TGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
G FA ++GAI+A A + L + LG+ FQ+ADD+LD E + K+
Sbjct: 177 AGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEGNEEAAGKR 232
>gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
Length = 324
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+ H + L I Y L LGGK++R L LF +H AL AIE
Sbjct: 11 FIDYLNKHTLEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEI 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +I + +
Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGD------AMLIRAYQLFENYE 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
+ L+ + + GQ D+ E D+ + + + KT L+ A + GAI
Sbjct: 123 GDTFKELAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A AS+ +E + +G +LG+ FQL DD LD D
Sbjct: 183 VAGASKTCQEAIYNYGRDLGLAFQLQDDYLDAFGDPE 219
>gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
Length = 296
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 13/242 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L L++ K ++ L +LL + + ++ ++L A+ YA++ GGK+IR L+
Sbjct: 2 LREYLEDKKKIVEGNLKELL----GNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICD 57
Query: 64 LFNVNHLTALR----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF N+ + + AA+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E ++
Sbjct: 58 LFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLV 117
Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT AF II++ K+ K+ I LS ++ +++ ++ +
Sbjct: 118 GDVLLTEAFGIIANSKSLGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTLK 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
I KTG L+ A E I ++E++ + + LGI FQ+ DD+LD E ++
Sbjct: 178 YIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEIG 237
Query: 236 KK 237
KK
Sbjct: 238 KK 239
>gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
Length = 294
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152]
gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152]
Length = 323
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ L S Q L + Y L LGGK+IR L A +F ++ AL A+
Sbjct: 8 EEFLSYLESKDWVQEPKNLYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAV 67
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H ++L+HDD+ MD+ +RRGK TVH ++D TAI++G+ +I + K
Sbjct: 68 EVFHNFTLVHDDI--MDDAPLRRGKATVHEKWDINTAILSGD------AMLILAYKYFEN 119
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESG 196
L+ + + GQ LD+ E + + +KT L+ A + G
Sbjct: 120 YKPEVFQKLAKLFSKTALEVCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMG 179
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+A + + + FG NLG+ FQL DD LD D
Sbjct: 180 AIVAESDDKNADLIYDFGLNLGLAFQLQDDYLDTFGDPE 218
>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 301
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 20/238 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
R+D L+D L Q + D L A+RY+L GGK++R LV A LF+ ++
Sbjct: 11 RDRVDRYLNDQLTQYDA------ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNRL 64
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+ L T+AFE++
Sbjct: 65 TDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFELL 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---------FMIQK 182
S+ ++ + + I G+ + + ID V + +
Sbjct: 125 SASYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMHQ 184
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL+ + GA Q +L + +G+ FQ+ DD++D D L K
Sbjct: 185 HKTGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGK 242
>gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
Length = 294
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q NS+++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNSQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231
>gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190]
gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579]
gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 125/246 (50%), Gaps = 15/246 (6%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
MN + +S R + LD LL + RL AIRYA GG K+IR L
Sbjct: 1 MNSVFSFHEWVTSHSIRTEQTLDRLLDSAQT-----IPHRLHEAIRYAAQGGGKRIRPLL 55
Query: 58 VTECASLFNVNHLTALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
V L N + + + AIECIH YSL+HDDLP MD+ Y+RRG+PTVH +DE
Sbjct: 56 VYAAGQLGNKSDVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDE 115
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
TA++ G+ L T AFEI+++ + +R L+ L+ + +D
Sbjct: 116 ATALLVGDALQTRAFEILANTNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLD 175
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + MKTGAL+ A E G I AH + + +L+ + ++LG+ FQ+ DD+LD D
Sbjct: 176 LQGLKQMHAMKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATAD 235
Query: 234 ---LPK 236
L K
Sbjct: 236 SQTLGK 241
>gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+ + + L I Y L LGGK++R L A +F+ N+ TAL A+E
Sbjct: 11 FIDYLKNQNIHKEPTNLYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVEV 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +I + + +
Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGQVTVHEKWDLNTGILSGD------AMLILAYQYFEQYE 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
L+ + + GQ D+ E + + + + KT L+ A + GAI
Sbjct: 123 PEVFRDLAKLFSKTALEVCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGAI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A S+ E + + FG NLG+ FQL DD LD D
Sbjct: 183 VAKTSEKEGDLIYDFGLNLGLAFQLQDDYLDAFGDPE 219
>gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 325
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ +LD + A+ + L + I Y L LGGK+IR L+ L+ N L
Sbjct: 6 EQLLDKVNTYLATMPYMREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQ 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A IE H Y+L+HDDL MD +RR KPTVH +DE TAI++G+ +L A+ ++++
Sbjct: 66 AAGIETYHNYTLLHDDL--MDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + S T +G + + + ++ + ++KT L+ A +
Sbjct: 124 D--SYLKQVMDIFSQTALEICEGQQWDMEFETRSDVTV-SEYIEMIRLKTSVLLSAALKI 180
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++ AS+ + ++L FG +G+ FQL DD LD
Sbjct: 181 GAVLGDASEEDAQKLYDFGIKMGLAFQLQDDFLDVYG 217
>gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822]
gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis]
Length = 321
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +D ++ D L ++T + + GGK++R +V
Sbjct: 1 MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + I SQ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEADSMRIMQILSQATTVIAEGEVLQLL------NVHDPDVSQERYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A AS ++ +G +G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRRVGTAFQLVDDVLDYSGDAHALGK 225
>gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3]
gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3]
Length = 294
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G+QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153]
gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis
H44/76]
gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase; OPP synthetase) [Neisseria meningitidis WUE
2594]
gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568]
gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385]
gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136]
gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
Length = 333
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 12/223 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR--LLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHLT 71
I ++ + +QTQ R L+ AI +Y + GGK++R LV A
Sbjct: 17 IHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLLAARSLGYEGDQ 76
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ + IE +H +L+HDD+ +D ++RRG+ T + + +++ G+ L + +F+++
Sbjct: 77 HVALATLIEFMHTSTLLHDDV--VDESHMRRGRATANDAWGNAPSVLVGDFLYSRSFQMM 134
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ I S ++ Q G + + + + KT L
Sbjct: 135 VGVGSMRIMEILSAATCTIAEGEVQQLTNVGNPDVDEAAYFET------IQGKTAMLFEA 188
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A GAI+A A+ ++ L+ +G LG+ FQL DDLLD D
Sbjct: 189 ASHCGAIIADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGDA 231
>gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
Length = 302
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 98/232 (42%), Positives = 144/232 (62%), Gaps = 8/232 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
S+ ++ +D + D LL + RL A+R+A +GG K++R LV + L
Sbjct: 12 ASRAAALAEDVDRLFDTLLA-----VPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASDL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
FN++ +ALRVG A+ECIH YSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ L
Sbjct: 67 FNISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCLH 126
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
AFEI++ +T +R +L+ +L G GM GGQM+D++ E D V +Q+
Sbjct: 127 DLAFEILADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQ 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+KTGAL+ F ++ AIMA + + RL + ++G+ FQ+ADDLLD E D
Sbjct: 187 LKTGALIAFCVDAAAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGDA 238
>gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
Length = 294
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A T+ L + + Y L +GGK+IR L+ +L+ +
Sbjct: 6 ELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +D+ AI++G+ +L A++ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPV 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ Q + M + + + + ++KT L+ + + G
Sbjct: 124 EHLKEVMDIFSLTALEICEGQQL---DMEFEHRKDVKAEEYLEMIRLKTSVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + E+L FG NLG+ FQL DD LD D
Sbjct: 181 ALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDIYGDAA 219
>gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
Length = 321
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + + ++ K +D ++ D L ++T + + GGK++R +V
Sbjct: 1 MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIG-------AGGKRMRPAMVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + +FE++ + I SQ + LQ + ++ D + + +
Sbjct: 112 GDYLYSRSFEMMVEADSMRIMQILSQATTVIAEGEVLQLL------NVHDPDVSQERYLQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A + GA++A AS ++ +G ++G FQL DD+LD D L K
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGDAHALGK 225
>gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
++I + + + ++ L I Y + LGGK++R L+ +F +
Sbjct: 1 MQQIQQLQNSINQYISNKKYGTTPVELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQ 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL AIE H ++L+HDD+ MD +RRGKPTVH +++ AI++G+ ++ A ++I
Sbjct: 61 ALAPALAIEVFHNFTLMHDDI--MDKAPLRRGKPTVHEKWNANVAILSGDVMMVEANKLI 118
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + + Q + M + + + ++KT L+
Sbjct: 119 MQVDDRILRPVLDVFNDTAVGVCEGQQI---DMNFETLTHVTIDEYINMIRLKTAVLVAG 175
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A + GA++ A E L FGE LGI FQL DD+LD D K
Sbjct: 176 ALKMGALVGGADDAEASLLYSFGEQLGIAFQLQDDILDVYGDPKK 220
>gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
solanacearum CMR15]
Length = 299
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ R ++ L+ L + RL +A+RYA LG GK++R L
Sbjct: 2 SDFAHWMASVVARTESALERALP-----GELVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + V A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF ++ R+ L+ L G GM GGQ +D+Q + +Q
Sbjct: 117 ALQTQAFIALAELGAV-SPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ A + E++ + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231
>gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis]
gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
Length = 343
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L ++++E +K +D ++ +L+ + L A R Y L GGK++R F+V
Sbjct: 5 DELFARIKEKAKDVDRVILELVPEKE-------PLELYKAARHYPLAGGKRVRPFVVLRA 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL A++E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+
Sbjct: 58 AEAVGGDPEKALYPAASVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKLWGVNMAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE I+ + + R +L T N+ +G + ++E + +
Sbjct: 116 LLFSKAFEAIAKAEVPAEKKARILDVLVRTSNLLCEGQALDIEFETKEEVTV-EEYLKMI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + E GAI+ + L +G N+GI FQ+ DD+LD D K
Sbjct: 175 SGKTGALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEK 229
>gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80]
gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52]
gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395]
gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2]
gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757]
gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80]
gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52]
gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395]
gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2]
gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395]
gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757]
Length = 294
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
Length = 324
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
Length = 324
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L H + L I Y L LGGK++R L LF ++ AL A+E
Sbjct: 11 FLEYLNKHALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEI 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H +SL+HDD+ MD+ +RRG+ TVH ++D T I++G+ +I + +
Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGEETVHEKWDINTGILSGD------AMLIRAYQLFENYE 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
+ L+ + + GQ D+ E D+ + + + KT L+ A + GAI
Sbjct: 123 GATFKELAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A AS++ +E + +G +LG+ FQL DD LD D
Sbjct: 183 VAGASKSCQEGIYNYGRDLGLAFQLQDDYLDAFGDPE 219
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 10/223 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
IL + L + + ++ A+ Y+L GGK++R L+ E LF
Sbjct: 16 AILREYLPE-----ANGYQSVIMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFM 70
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AA+E IH YSL+HDDLP+MDN RRG+ T HI Y E I+AG+ LL YAFE
Sbjct: 71 AAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFE 130
Query: 137 QLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKMKTGALMCFA 192
Q + Q M L G+ GM+GGQ++D+++ + I ++KTGAL+ A
Sbjct: 131 QFPEESLRIGQAMRVLARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESA 190
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A AS+ + + ++ +G+ FQ+ DD+LD
Sbjct: 191 MMIGAILAGASKEDVKSMQKIAGKIGMAFQIQDDILDVTSTTE 233
>gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226]
gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226]
Length = 294
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
[Rhodobacterales bacterium HTCC2654]
Length = 331
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L+++ ++D ++ + + + L+ A GGK++R L A L
Sbjct: 13 LAAHLKDDLSQVDEMIRARMASEHAPRIPEVTAHLVDA------GGKRLRPMLTLASARL 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A+E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 CGYEGGHHIHLATAVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F++++ + + S ++T LQ QD E F + + K
Sbjct: 125 ARSFQLMTEADSLRVLQVLSNASATITEGEVLQL------TAAQDLGTTEDTYFKVVRGK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G I+A S++ + L +G+ LGI FQ+ DDLLD
Sbjct: 179 TAALFAAATEVGGILAGVSEDRIKALHDYGDALGIAFQVVDDLLDFWG 226
>gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
Length = 305
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+ ++ R++ L D L N L A+RY LLGGK++R FL
Sbjct: 7 DSFTQQQKQAYDRVNQYLLDALNAL-----PFANLPLAQAMRYGTLLGGKRLRPFLTYAI 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
S+F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI+Y E A++AG+
Sbjct: 62 GSMFGVSQENLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKYGEGNAVLAGD 121
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF+++SS P + D R ++ L++ GL GM GGQ LD + + +D +
Sbjct: 122 ALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYASGLAGMCGGQALDLDAEGKQVDLESLE 181
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234
I + KTGAL+ A GA A Q L + +++G+ FQ+ DD+LD D
Sbjct: 182 RIHQHKTGALIRAAIRLGAFAAGEKGQQLLPVLDKYAQSIGLAFQVQDDILDVIGDSEVT 241
Query: 235 PKK 237
K+
Sbjct: 242 GKR 244
>gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase; OPP synthetase) [Neisseria meningitidis
8013]
Length = 324
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans]
gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Herminiimonas arsenicoxydans]
Length = 294
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 7/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
++ ++ L L A RL A+ YA+L GGK++R LV
Sbjct: 3 SFDGWMKATQGEMELALVQHLPPVA-----LTPARLHEAMHYAVLDGGKRVRPLLVYAAG 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LF+ + R AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YDE A++ G+
Sbjct: 58 ALFDADAAELARAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF++++ + +L+ L + ++ + +
Sbjct: 118 LQSQAFDVLADGGIDPVRQLAMVRLLAKASGSLGMCGGQAIDLASVGLNLSLEELEQMHR 177
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ + GA+ + S E + L + +G+ FQ+ DD+LD D
Sbjct: 178 LKTGALLRVSVLLGALAGKSLSAEETQALDSYAAAIGLAFQVVDDVLDATADSA 231
>gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
Length = 324
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
Length = 324
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ R++ +++ + + + +Q ++SA GGK++R + A
Sbjct: 8 FQRHLPEDLSRVNEVINQAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAAKS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVDSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------AQYVQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ +A+ ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
Length = 322
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 1 MNGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S + ++ + +DT + L + + Y + GGK++R LV
Sbjct: 1 MTPSIIQSCINDDMRMVDTTIRQSLHSEVALVN--------QVAEYIINSGGKRLRPMLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A LF ++ A +E IH +L+HDD+ +D RRG+ T + + +++
Sbjct: 53 LLAAGLFGEIQTQHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQSTANALFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + + AF+++ + + + S + LQ + ++ + I +
Sbjct: 111 VGDFVYSRAFQMMVAVQNMRVMEVLSNATNVIAEGEVLQLL------NVNNADISDKAYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ KT L A GAI++ AS ++ L +G +LG FQL DD+LD D+
Sbjct: 165 QVIHYKTAKLFEAATRLGAIISEASAKDEAALTAYGMHLGTAFQLIDDILDLSGNSEDIG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
Length = 297
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 10/238 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ +L + ++I+ +D L + +T +LSA+ Y++ GGK++R L+ E
Sbjct: 2 PSIKEQLSKKIEKIEQTIDFYLPEEKGLQKT-----VLSAMNYSVKAGGKRLRPMLMAET 56
Query: 62 ASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F + AAIE IH YSLIHDDLP++DN +RRG PT HI++ E AI+AG
Sbjct: 57 YEMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
+ LL YAFE + +I+ ++ + LT G+ GM+GGQ +D++ E I +
Sbjct: 117 DALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTL 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT AL+ A GA++A AS+ E + +GI FQ+ DD+LD
Sbjct: 177 MYIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDVVSTSE 234
>gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2]
gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51]
gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385]
gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51]
gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2]
gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385]
gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
Length = 294
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400]
gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400]
Length = 293
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 128/238 (53%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + R++ IL+ L + L +A+ + ALLGGK+IR FLV
Sbjct: 2 LAEAITTYQNRVNGILNQHLT-----LLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ VN + AAIECIH YSLIHDDLP+MDN +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEII++P L + ++ L G QGM GGQ +D D I+ ++ +
Sbjct: 117 QTLAFEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTELH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL+ A E I A + + + LG+ FQ+ DD+LD +L K
Sbjct: 177 NKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGK 234
>gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
Length = 288
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L+E ++T + A+ + L A+ YA GGK++R+FL E A++
Sbjct: 2 FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ A+E +H YSL+HDD+P MDN +RRG PTVH ++D+ TA++AG+ L
Sbjct: 55 HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE+ + P +N + + + + G + + + I +++
Sbjct: 115 TLAFELCTDPVLGSAENRVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQ 174
Query: 185 TGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
G FA ++GAI+A A + L + LG+ FQ+ADD+LD E + K+
Sbjct: 175 AGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEGNEEAAGKR 230
>gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
Length = 293
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + + +R+D + ++ A+ + +L +A+++ AL+GGK+IR FLV
Sbjct: 2 LARAISQYQQRVDEQIKSIIDSQAT-----TDLKLQAAMKHGALIGGKRIRPFLVYAIGD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ NV AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MLNVAPEKLDACAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
AFE I P + + ++ +L G GM GGQ +D+ + +
Sbjct: 117 QALAFESICEPINGITPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++KTGAL+ A E I A + E+ L F + +G+ FQ+ DD+LD E+L K
Sbjct: 177 RLKTGALIRCAVELPMIAAAVTVEEQNLLMDFADAIGLAFQVQDDVLDIIASTEELGK 234
>gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355]
Length = 324
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
Length = 322
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S + + R+DT++ + L ++ + S GGK++R LV A
Sbjct: 6 IRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINS-------GGKRLRPALVILSAGA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F + A +E IH +L+HDD+ +D +RR K T + + +++ G+ L
Sbjct: 59 FGYTGQYHYNLAAIVEFIHTATLLHDDV--VDASELRRSKATANALFGNAASVLVGDFLY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF+++ + + ++ LQ + ++ + + + K
Sbjct: 117 SRAFQMMVEVDNMRVMRVLADATNTIAEGEVLQLLNVRDPDVDEENY------LRVIRYK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T L A GAI+ +AS E+E + +G +LG FQL DD+LD D K
Sbjct: 171 TAKLFEAATRLGAILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGDYQETGK 225
>gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 290
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
E + I+ + + ++ ++ Y+L GGK++R L + +
Sbjct: 10 SEIIELINNSIYRSFTAADEY-----QKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGS 64
Query: 69 HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GLL
Sbjct: 65 EDFTKILPFATAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNM 124
Query: 127 AFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQ 181
+ E++S + + M + G+ GM+GGQ++D++ + +
Sbjct: 125 SAEVMSRELDKYDEMDELKRAIKAMKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMY 184
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
K+KT AL+ A SGAI+A AS E + +GI +Q+ DD+LD E D K+
Sbjct: 185 KLKTAALIKAAIVSGAIIAGASDEEIATFEEYANCIGIAYQIRDDILDLEADSKKE 240
>gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39]
gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39]
Length = 294
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9301]
gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9301]
Length = 323
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++I+++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSFPKYINKSYC------KT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33]
gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10]
gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33]
gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10]
gi|255737712|gb|EET93106.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
Length = 294
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
Length = 293
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+ E +I++ LD ++ + N L +++Y+L GGK+IR LV +
Sbjct: 3 KKSMNELINQINSALDGVIE------TSPLNTNLEESMQYSLNAGGKRIRPLLVFLTLDV 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N ++ + A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LL
Sbjct: 57 LNQDYKKGKKTALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALL 116
Query: 125 TYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T AFEII+ + D ++ L+ + +D+ +D + I K
Sbjct: 117 TKAFEIIADDELLESDVKVKILSRLAHNSGHLGMVGGQTLDMQSEDKPVDLDTLEQIHKA 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ FA S A +A ++ + L F ++G++FQ+ DDLLD D K
Sbjct: 177 KTGALLQFAVLSAADIAKVDKSTSQALEDFSNHMGLMFQIKDDLLDVYGDESK 229
>gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
A8]
gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
A8]
Length = 308
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
K +D ++ + L ++T + + GGK++R +V A
Sbjct: 1 MKAVDAVIRERLNSEVVLIRTIGDYIIG-------AGGKRMRPAMVLMVARALGYEGTHH 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 54 QLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ +I S+ + LQ + ++ D + + + + + KT L A
Sbjct: 112 EANSMRVMSILSEATTVIAEGEVLQLL------NVHDPDVSQERYLQVVRYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ GA++A A+ ++ +G ++G FQL DD+LD D L K
Sbjct: 166 AQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAAALGK 212
>gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma
proteobacterium EB000_65A11]
Length = 321
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ + ++ + +D ++ L+ ++ + + L+ A GGK++R LV
Sbjct: 1 MDHPFYTTVKTDFSAVDVLIKSSLVTRVPLVE-EISTYLIEA------GGKRLRPLLVLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A N + + IE +H L+HDD+ +D +RRG+ TV+ + +++ G
Sbjct: 54 AARACNYQQHQHINLATIIEFLHTAMLLHDDV--VDESDLRRGRKTVNAAWGNPASVLVG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + AFE++ + + Q+ +I++ E +
Sbjct: 112 DFLHSRAFEMMVEIGDLRVME------ILSHATNTIAEGEVQQLGNIRNPDATEQSYIEV 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A SGA++A AS ++ L+ +G +LG+ FQL DD+LD E
Sbjct: 166 INRKTAMLFEAASHSGAVLAGASPEQELSLQQYGCHLGVAFQLIDDILDYEGSTE 220
>gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
Length = 316
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
P + + R ++ L + L A+RYA+L GGK++R LV A
Sbjct: 21 DFPCWMTDRLARTESALSQ-------WVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 73
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+R G A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+
Sbjct: 74 EAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDA 133
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQV 177
L AFE++ Q + G G D + E Q+
Sbjct: 134 LQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQL 193
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA + L +G+ LG+ FQ+ DD+LD D
Sbjct: 194 REMHRLKTGALLHASVLMGAACKEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSA 252
>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 304
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 1 MNGGL--PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
MN L + + + +++ L +L L ++ Y+L GGK++R L
Sbjct: 1 MNDSLTIQQYISQTASDVESALQTILP-----TSWDVPALLKESMMYSLQAGGKRLRPAL 55
Query: 58 VTECASLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
V A + A+ V AIE IH YSLIHDDLP+MDN RRGK T H + +
Sbjct: 56 VLAAAEAVKCDSRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDA 115
Query: 115 TAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDE 170
AI+AG+ LLT+AF I Q + +++ L+ G GM+GGQ + +
Sbjct: 116 MAILAGDALLTHAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQG 175
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
Q+ I KT L+ F+ +GA++ A++ + E++ FG +G+ FQ+ DD+LD
Sbjct: 176 VTSIDQLRYIHLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDL 235
Query: 231 EEDLPK 236
D K
Sbjct: 236 VGDEAK 241
>gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
Length = 322
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 16/236 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + ++ R++ ++ L ++ + S GGK++R LV
Sbjct: 1 MTAQRIYDTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIES-------GGKRLRPLLVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++
Sbjct: 54 LSSRALGYNKDEHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE++ + ++ S + LQ M + +
Sbjct: 112 GDFLYARAFEMMVELQNLKIMDVLSHATAVIAEGEVLQLMNVKNPDVSE------DKYME 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A +GA++A A+ ++++ L +G++LG+ FQL DD+LD D
Sbjct: 166 VIHNKTAMLFEAASHTGALLAGANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAE 221
>gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118]
gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118]
Length = 314
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 13 SKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-- 68
+++ L+ + A+ + L++A+RYA+L GGK++R LV + +
Sbjct: 17 LAHVESALERWVRPDAATDAEGGAPVELMAAMRYAVLDGGKRLRPLLVLAASEAASGERP 76
Query: 69 -----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
ALR A+E IH YSL+HDDLP MDN +RRGK TVH+++ E +A++AG+ L
Sbjct: 77 AAANTPEIALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKATVHVKFGEASAMLAGDAL 136
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQ 181
AFE+++ + ++ L L G GM GGQ +D+ + T+ +
Sbjct: 137 QAMAFELLTPDDDAIPARQQAALCRLLARAAGSAGMAGGQAIDLASVGVALTERQLRQMH 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + GA S + L +G +G+ FQ+ DD+LD D
Sbjct: 197 RLKTGALLQASVMMGAACGDVSAQAEAALMSYGAAIGLAFQVVDDMLDVTADSA 250
>gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603]
gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603]
Length = 294
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGSLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRTILPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
Length = 332
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ ++ Q+ +I+ L + Q + L + RY L G GK+IR FL
Sbjct: 8 AQVETRYQQYHAKINEALAACFPK-------QSPETLYAPARYILEGKGKRIRPFLTLLA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + AL V IE +H ++L+HDD+ MD +R G+PTVH Q+D AI++G+
Sbjct: 61 SEAVSGSSENALGVALGIEVLHNFTLMHDDI--MDAADLRHGRPTVHKQWDVNAAILSGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
++ YA+E+ + + + Q + M Q + + +
Sbjct: 119 MMIAYAYELALKAISSRHAEMIHIFNDANITICEGQAL---DMELEQRKDVTIADYLDMI 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A E+G + + + + L FGE +G FQ+ DD LD K
Sbjct: 176 SKKTGRLISAALEAGGVAGNGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230
>gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. AS9601]
gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. AS9601]
Length = 323
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
Length = 294
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ I +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256]
gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256]
Length = 306
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 134/234 (57%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
L + E ++ ID + D LL + L A+RYA + GGK++R LV
Sbjct: 15 LRATQAEVAEGIDALFDQLLA-----VPADPRGPLYEAMRYAAIAGGKRLRPLLVRAAGD 69
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF+V+ LRVGAA+E +H YSLIHDDLP MD+ +RRGKPT H + E TA++AG+ L
Sbjct: 70 LFHVDRALTLRVGAAVEAMHVYSLIHDDLPCMDDDDMRRGKPTTHKAFGEATAVLAGDSL 129
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
AFE + P T +R++L L G GM GGQM+D + D V +Q
Sbjct: 130 HALAFEWLCDPATSADPFVRAELCCELARAAGPAGMAGGQMMDLAAETSDFDLPTVTRLQ 189
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ F+ E+GAI+A + LR + ++G+ FQ+ADD++D E D
Sbjct: 190 QLKTGALIAFSVEAGAILARIPAEGRRPLRGYARDIGLAFQIADDIMDVEGDEA 243
>gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3]
gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate
Synthetase From Pyrococcus Horikoshii Ot3
gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase
[Pyrococcus horikoshii OT3]
Length = 342
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L ++++E +K ID + +L+ + + L A R Y L GGK++R F+V
Sbjct: 5 EELFARIKEKAKLIDEKIFELIPE-------KDPRVLYEAARHYPLAGGKRVRPFVVLTS 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L A+ AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+
Sbjct: 58 TEAVGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDET--RRGKPTVHRIWGVNMAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE ++ + + R ++ N +G + + + +
Sbjct: 116 LLFSKAFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEKKSTVTI-EEYMEMI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + + G I+ ++ + L +G N+GI FQ+ DD+LD D K
Sbjct: 175 SGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKK 229
>gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1]
gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
Length = 307
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 14/244 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
L + L +R + L+ L +H + A+RYA+LGG K++R LV
Sbjct: 11 EALEAALPPLRERAERALEAALPAADAH-----PTGIHEAMRYAVLGGGKRMRPILVYAT 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+E IH YSL+HDDLP+MD+ +RRG+PT H YDE TAI+ G+
Sbjct: 66 GQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILVGD 125
Query: 122 GLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L AFE+++ L+ G L +D ++
Sbjct: 126 ALQARAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAAEL 185
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ KTGAL+ + + GA+ + + L + + +G+ FQ+ DD+LD E D
Sbjct: 186 EDMHIHKTGALIRASVQLGALASGPTCAATLNALDRYAKCVGLAFQIHDDVLDVEGDADA 245
Query: 234 LPKK 237
L K+
Sbjct: 246 LGKE 249
>gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1]
gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1]
Length = 330
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 17/230 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + +D ++ L + + Y + GGK++R LV A
Sbjct: 13 SFADLVAADMGEVDALIRRRLASDVALINQIS--------HYIISAGGKRLRPMLVLLFA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + ++ +++ G+
Sbjct: 65 QALGFRGPERFELAATVEFIHTATLLHDDV--VDESALRRGRDTANARFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ S + + + LQ M D + + +
Sbjct: 123 LYSRAFQMMVSVNRMRVLEVLADATNVIAEGEVLQLMNM------HDPDLSIDDYLRVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L + GA++A AS + +G LG FQL DDLLD E
Sbjct: 177 FKTAKLFEASARLGAMLADASPGVETACADYGRALGTAFQLVDDLLDYEG 226
>gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573]
gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573]
Length = 294
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALSAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
Length = 327
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + A + L IRY L +GGK+IR L+ +L+
Sbjct: 6 EVLDYINGEIAGMSFERQPAELYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRG TVH ++D+ AI++G+ +L A+ +
Sbjct: 66 VAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L IG + D + + ++KT L+ A + G
Sbjct: 124 AEHLGDVMSLFTETALEIGEGQQYDMEFEARADVSE--EEYIEMIRLKTSVLLACALKIG 181
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
A + A + + E L FGENLG+ FQL DD LD D KK
Sbjct: 182 AWLGGAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225
>gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 322
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+Q + I L + Q +++ + Y L GGK+IR ++ A L
Sbjct: 1 MQAALELIGEDLKQVEEQFRKDLESDVP-LIRKVGEYVLASGGKRIRPAMLLLAARLCEY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A+ + + +E IH +L+HDD+ +D+ +RRG + + + +++ G+ L + +
Sbjct: 60 QGNQAIPLASVVEFIHTATLLHDDV--VDSATLRRGLASANTLWGNEASVLIGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + + S+ + LQ + G++ + Q + + KT
Sbjct: 118 FSLMVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTEQ------QYIEVVRAKTAV 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ AC+ GAI+ S +++ L FG LGI FQL DD+LD
Sbjct: 172 LLSAACQCGAILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEE 219
>gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus sp. NA2]
gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus sp. NA2]
Length = 341
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L +++E +K +D L +++ + L A R Y L GGK++R F+V
Sbjct: 4 DELFERIREKAKFVDEKLFEIIPEKE-------PKVLYEAARHYPLAGGKRVRPFVVLTS 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ AL AIE IH YSL+HDD+ MD RRGKPTVH + AI+AG+
Sbjct: 57 TEAVGGDWRKALYPAVAIELIHNYSLVHDDIMDMDET--RRGKPTVHRVWGINMAILAGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE IS + + + + L N +G E + + +
Sbjct: 115 LLFSKAFEAISRAEVPPEKKAKILETIVLASNELCEGQAMDLEF-ENREAVTIEEYMNMV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + + G I+ S+ L +G N+GI FQ+ DD+LD D K
Sbjct: 174 SGKTGALFEASAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLDLIADEKK 228
>gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506]
gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506]
Length = 305
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 134/208 (64%), Gaps = 10/208 (4%)
Query: 37 DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
+RL SA+R+ AL GGK++R FLV E A+LF V A+ AA+ECIHCYSL+HDDLP+M
Sbjct: 34 ERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPAM 93
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
DN +RRG+PTVH YDE TAI+AG+GLLT AFEI++ + +R L+ SL H G
Sbjct: 94 DNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAAG 153
Query: 156 LQGMLGGQM---------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ GM+GGQM + + ++ +Q MKTGAL+ ACE+GA++ A+ E
Sbjct: 154 VAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPEE 213
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
+ L + +G FQ+ADDLLD E +
Sbjct: 214 RASLDRYARAVGRAFQIADDLLDVEGEA 241
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALL-GGKKIRSFLVT 59
+ S + +K I+ LD+ + + + + A+RY LL GGK++R L
Sbjct: 36 DSEFISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCL 95
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L TA+ A+E IH SLI DDLP MD+ +RRG PT H + E T+I+A
Sbjct: 96 VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILA 155
Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-------MLDIQDEF 171
N L++ A + ++S + + + + +G +G++ GQ + ++E
Sbjct: 156 SNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 215
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + ++ KT L+ A GAIM S E ERL+ + +G++FQ+ DD+LD
Sbjct: 216 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 275
Query: 232 ---EDLPK 236
E+L K
Sbjct: 276 KSSEELGK 283
>gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
Length = 295
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 124/243 (51%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN + + + +L +L +TA L A+RYA L GGK++R LV
Sbjct: 1 MN-DFVTWQKTAQAHTEAVLQQMLPETA-----LAPQGLHEAMRYAALDGGKRLRPMLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L N AA+ECIH YSL+HDD+P MDN +RRGKPT H+ Y TA++
Sbjct: 55 AAAELGNRVQAACEAALAAVECIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
G+ L T AFE++S +T L + +++ L G GM GGQ +D+ + D Q
Sbjct: 115 GDALQTLAFELLS-RQTDLPAARQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDAL 173
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ +KTGAL+ A + GA+ + L + LG+ FQ+ DD+LDC D
Sbjct: 174 EQMHSLKTGALIRAAVQLGALSCPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAADTTT 233
Query: 234 LPK 236
L K
Sbjct: 234 LGK 236
>gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
Length = 287
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 16 IDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
D + + + T RL +A+R+A+LGG K++R LV +LF
Sbjct: 2 FDHWIARTERSLEAALPGATLAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLL 61
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE+++
Sbjct: 62 DTPAVSVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLA 121
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
S + + L+ G +D + + + +KTGAL+ A
Sbjct: 122 SAPVSAELRVGWLQHLASAAGAGGMCGGQALDIDATGQVQSLHALQRMHALKTGALIRAA 181
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA+ A+ +++R+ F + LG+ FQ+ DD+LD E
Sbjct: 182 VRMGALSGRAAPADQQRVDDFADALGLAFQVRDDILDVESSSA 224
>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
Length = 305
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+L + I+ ++ L + H +T + A+ Y++ GGK++R L+ E
Sbjct: 7 ETFKQELDARTAEIEQLIGTYLPEETGHQKT-----IFEAMNYSMKAGGKRLRPMLMQEM 61
Query: 62 ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF + AA+E IH SL+HDDLP MD+ +RRGK + +Y E ++ G
Sbjct: 62 CRLFTGTLLEAVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTG 121
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDE 174
+ L+ YAFE ++ D + + + + G + + I
Sbjct: 122 DALMMYAFETAANAFETSIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPG 181
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ I ++KTGAL+ + GA++ A++ + + + +G+ FQ+ DD+LD
Sbjct: 182 DKLEFIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTG 239
>gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336]
gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336]
Length = 296
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
LQE+ +RI+ L+ S L A++Y LLGGK+IR FLV
Sbjct: 4 FAQDLQESKQRINFFLEKQFECIDS-----SPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L
Sbjct: 59 MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+AFE+++ P + + L+ + + L +++ I+ + + I +
Sbjct: 119 QPFAFELLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHR 178
Query: 183 MKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTGAL+ A + G I + A+ +E+L + +G+ FQ+ DD+LD E +
Sbjct: 179 NKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGES 232
>gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
Length = 311
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 95/238 (39%), Positives = 149/238 (62%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L + + + I++++D LL + RL+ A+RYA LGG K++R +LV E AS
Sbjct: 20 LRASMSARATAIESMIDRLLPRVEG-----GEARLIDAMRYATLGGGKRLRGYLVAEVAS 74
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LFNV A RV A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75 LFNVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 134
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
T AF+I+++P T +R L+ +L G GM+GGQM+D++ E +V +
Sbjct: 135 QTMAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLH 194
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ ++ E+GAI+ A ++ + R+ +G +LG FQ+ADD+LD +L K
Sbjct: 195 ALKTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDATASAEELGK 252
>gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 295
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 144/238 (60%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L + L ++ ++ +D LL RL+ A+RYA LGG K++R +LV E AS
Sbjct: 4 LRASLAARAEAVEHTIDRLLAPV-----NGGEARLIDAMRYATLGGGKRLRGYLVAEVAS 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V A R A++E +H YSL+HDDLP+MD+ +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 59 MFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
T AF I++ P T +R L+ +L G GM+GGQM+D++ E +V +
Sbjct: 119 QTMAFGILADPATHRDAGVRIDLVTTLAAASGAAGMVGGQMIDMEGEGRSLSLEEVARLH 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ ++ E+GAI+ A+ + +ER+ +G +LG FQ+ADD+LD +L K
Sbjct: 179 ALKTGCLIRYSAEAGAILGQAAPDLRERIAAYGRDLGAAFQVADDVLDATASAEELGK 236
>gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
Length = 322
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANAMWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMRILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A +A A++ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALAGATEEQAEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 296
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
LQE+ +RI+ L+ S L A++Y LLGGK+IR FLV
Sbjct: 4 FAQDLQESKQRINFFLEKQFECIDS-----SPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N + AAIE IH YSLIHDDLP+MDN +RRG PT HI +D TAI+AG+ L
Sbjct: 59 MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+AFE+++ P + + L+ + + L +++ I+ + + I +
Sbjct: 119 QPFAFELLTQTPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHR 178
Query: 183 MKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTGAL+ A + G I + A+ +E+L + +G+ FQ+ DD+LD E +
Sbjct: 179 NKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGES 232
>gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
sp. BAL39]
gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
sp. BAL39]
Length = 322
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 20 LDDLLLQTASHMQ-TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L + + Q ++ +RL I Y + LGGK+IR LV A LF + +
Sbjct: 7 LQEFIDQAIQNIIYPAQPERLYLPISYIMSLGGKRIRPALVLMSADLFAADVHQVMPAAL 66
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
AIE H ++LIHDD+ MDN +RRGK TVH ++ AI++G+ ++ A + ++
Sbjct: 67 AIETFHNFTLIHDDI--MDNAPLRRGKATVHEKWGVNNAILSGDVMMVEANKHLAMLDAA 124
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + + Q + M + + + + ++KT L+ A + GA
Sbjct: 125 VLKDALETFNSTAQGVCEGQQL---DMEFESRDQVSIPEYINMIRLKTAVLLGGAMKLGA 181
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+A A++++ E+L FGENLGI FQL DD+LD D K
Sbjct: 182 QVARATKSQAEQLYAFGENLGIAFQLQDDILDVYGDPEK 220
>gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
HF10-11H7]
Length = 323
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEFCLTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
Length = 324
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQKHLSEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGRS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + + + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EEYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + G+I+ +A ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
Length = 342
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L +++++ +K +D +L L+ + +L A R Y L GGK++R F+V
Sbjct: 5 DELFARVKKMAKSVDDVLFKLIPERE-------PRKLYDAARHYPLAGGKRVRPFVVLRA 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+
Sbjct: 58 AEAVGGDPSKALYPAAAVELIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE ++ + + R +L T N +G + ++E + +
Sbjct: 116 LLFSKAFEAVARAEISPEKKARILEVLVQTSNELCEGQALDIEFETREEVTV-DEYLQMI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + GAI+ ++ + L +G N+GI FQ+ DD+LD D K
Sbjct: 175 SGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEK 229
>gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9]
gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9]
Length = 300
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 86/242 (35%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFL 57
MN L L+ R + L L Q + L+ ++Y LLGGK+ R FL
Sbjct: 1 MNNNLTLSQSLKHYQDRSNQHLAQWLEA-----QPFADQALVKTMKYGTLLGGKRARPFL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ AA+ECIH YSLIHDDLP+MD+ +RRG PT HI +DE AI
Sbjct: 56 TYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDE 174
+AG+ L T AFEI++ K + R ++ L G GM GQ L+ + + +D
Sbjct: 116 LAGDALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKHVDL 175
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
Q+ I K KTGAL+ A GA+ A +L F + +G+ FQ+ DD+LD D
Sbjct: 176 QQLETIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSD 235
Query: 234 LP 235
Sbjct: 236 TE 237
>gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 296
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 116/234 (49%), Gaps = 10/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ I+ IL L ++ H ++++ A+ Y L GGK+IR L+ E
Sbjct: 2 NFNELREAKVTEIENILRKYLPDSSGH-----QEKIMEAMEYNLMAGGKRIRPMLMKETY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F AAIE IH YSLIHDDLP+MDN RRG+ T HI Y E I+AG+
Sbjct: 57 EMFGGTGKIIEPFMAAIEMIHTYSLIHDDLPAMDNDDYRRGRKTTHIVYGEAMGILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQV--F 178
LL YAFE S +DN G+ GM+GGQ++D+ +
Sbjct: 117 LLNYAFETASEAFDMDRDNGYLIGKALQILGRKAGIYGMIGGQVVDVAASGKAVDKDVLD 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTGAL+ + GAI+A A++ E + + + +G+ FQ+ DD+LD
Sbjct: 177 FIYDLKTGALIEASMMIGAILAGATEQEVKIIESAAKKVGLAFQIQDDILDVTS 230
>gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
Length = 340
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 11/237 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59
M L K++E +K +D L L+ + L A R Y L GGK++R F+V
Sbjct: 1 MYDELFKKIKEKAKFVDEKLLSLIPEKE-------PKILYEAARHYPLAGGKRVRPFVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A+ AIE IH YSL+HDD+ MD RRG+PTVH + AI+A
Sbjct: 54 TATEAVGGEWEKAIYPAVAIELIHNYSLVHDDIMDMDET--RRGRPTVHKVWGINMAILA 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AFE IS + + R + N +G + +D +
Sbjct: 112 GDLLFSKAFEAISRAEIPPEKKARVLETVVKASNELCEGQAMDLEFEKRDTVTI-EEYMR 170
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTGAL + + G I+ ++ L +G N+GI FQ+ DD+LD D K
Sbjct: 171 MISGKTGALFDASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEK 227
>gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43]
gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str.
Alaska E43]
Length = 289
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 9/231 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ ID L + S+ N + + Y++ +GGK+IR L+ SL+
Sbjct: 2 EIDNLKNSIDEYLKKYFINRNSY-----NKTVYESAGYSVNIGGKRIRPTLLILTYSLYK 56
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N + + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL
Sbjct: 57 DNIEKIMPIAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNE 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A ++ + + ++ G +GM+GGQ++D + I + ++ + + K
Sbjct: 117 AMTLL-MKSSLELGESALKASYEISKAAGPEGMIGGQVVDVLSEVREISKEELEYMHEKK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TG L+ + +G I+A+ + E L +G+ LG+ FQ+ DD+LD
Sbjct: 176 TGELIRVSIVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEE 226
>gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
Length = 333
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 14/232 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L L ++T++ + + + + L+ A GGK++R L A
Sbjct: 12 EQLARHLDSKMAAVNTLIRERMASRHAPRIPEVTAHLVEA------GGKRLRPMLTLATA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+
Sbjct: 66 DMCGYGGAFDVHLAATVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDNKSSVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF+++ P +I S + LQ +D DE + +
Sbjct: 124 LFARAFQLMVEPGNLRVLDILSNAAAVIAEGEVLQL------SAARDLKTDENIYLQVVR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT AL A E G ++A A + + + L +G+ LGI FQ+ DDLLD + D
Sbjct: 178 GKTAALFSAATEVGGVIADAPEAQIKALFDYGDALGIAFQIVDDLLDYQGDS 229
>gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
Length = 296
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 6/233 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
LQ S+ +DDLLLQ + RL +A+R+ +LGGK++R FLV S+ +
Sbjct: 2 SLQTFSQHYRQRIDDLLLQKIETLPDLSP-RLKAAMRHGLVLGGKRVRPFLVYATGSMLD 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ AAIECIH YSLIHDDLP+MD+ +RRG PTVH +DE TA++AG+ L T
Sbjct: 61 IDEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTL 120
Query: 127 AFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKM 183
AF I++ + +++ +L G GM GGQ L + + + + +I +
Sbjct: 121 AFSILADHPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHRH 180
Query: 184 KTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA+ + L+ + +G+ FQ+ DD+LD D
Sbjct: 181 KTGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSDTE 233
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
T++ ++ + + Q+ D++ A+RY++L G K+ + LF N A
Sbjct: 27 TLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPT 86
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S
Sbjct: 87 ACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHT 146
Query: 136 TQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ ++ + +G GM GQ LD++ V +Q+ K G + +
Sbjct: 147 PSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGP---NSVEFVQEKKFGEMGECSA 203
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-----DLPKK 237
G ++A A +E +RLR +G +G+++Q+ DD+L+ + D KK
Sbjct: 204 VCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKK 252
>gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99]
gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99]
Length = 293
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 88/234 (37%), Positives = 134/234 (57%), Gaps = 11/234 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
+ +R+D+ L+ + QT + +LL+A+++ ALLGGK+IR FLV + ++
Sbjct: 6 ITRYQQRVDSQLEKIFDN-----QTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGDMLSI 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AAIEC+H YSLIHDDLP+MD+ +RRG+PTVH+ +DE AI+AG+ L A
Sbjct: 61 PLKQLDSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDALQALA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
FE++ P ++ ++ +L G GM GGQ +D ++ ID + + K+KT
Sbjct: 121 FEVMCEPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLHKLKT 180
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GAL+ A E I A SQ E+ L F + +G+ FQ+ DD+LD +L K
Sbjct: 181 GALIRCAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLDIISSTDELGK 234
>gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
Length = 294
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S N+++++ LD L N L++A+RY LLGGK+ R FLV
Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+
Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ ++ R +++ L G QGM GQ ++ ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231
>gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
Length = 294
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S N+++++ LD L N L++A+RY LLGGK+ R FLV
Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+
Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ ++ R +++ L G QGM GQ ++ ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231
>gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222]
gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222]
Length = 287
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L E ++ LD M L A+RYA +GGK+IR+FLV E A LF +
Sbjct: 4 RLDEVKTQVQAALD-------GAMAGLPEGELTDAMRYACIGGKRIRAFLVMESARLFGL 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+L V AA+E +H YSL+HDDLPSMD+ +RRG PTVH+++ E TAI+AG+ L + A
Sbjct: 57 RDRESLPVAAAVEALHAYSLVHDDLPSMDDDDLRRGLPTVHVRWSEATAILAGDALQSLA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +++ + + + + G + G + + ++ + I++++
Sbjct: 117 FGLLTDAQIGAPEIRLALVSGFSEAVGGRGMVWGQALDIAAETAVEPLDLMAIKRLQQAK 176
Query: 188 LMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
F+ +GA+MA L + NLG+ FQ+ DD+LD D K+
Sbjct: 177 TGALIQFSATAGAVMAGQDTG---PLAEYARNLGLAFQIHDDVLDVTGNEADTGKR 229
>gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
Length = 324
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L+ + R++ +++ + + + +Q ++SA GGK++R L
Sbjct: 8 FQQNLETDLSRVNVVINRAVQSEVALI-SQIGTYIISA------GGKRLRPILTILAGKC 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 LGCDSDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + ++ + +Q M G + T+ + + K
Sbjct: 119 TRAFQLMVGSGSLKILEVMAEATNIIAEGEVMQLMNIGNTEISE------TEYLQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L A + GAI+A A+ +++ L+ +G ++G FQ+ DD+LD
Sbjct: 173 TAKLFEAAAQVGAILAGATSGQEQALKDYGAHIGTAFQIIDDVLDYSG 220
>gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
Length = 324
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPDDLAKVNAVINQAVQSDVALI-SQIGTYIISA------GGKRLRPIITILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYVQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
Length = 324
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L+ + R++ +++ + + + + S GGK++R L
Sbjct: 8 FQQNLEADLSRVNVVINRAVQSDVALISQIGTYIIGS-------GGKRLRPILTILSGKC 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + + Q + + K
Sbjct: 119 TRAFQLMVGSGSLKILEVMADATNIIAEGEVMQLMNIGNVDITEQ------QYLQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L A + GAI+A A ++ L+ FG +G FQ+ DD+LD
Sbjct: 173 TAKLFEAAAQVGAILAGADDEQERALKEFGMYMGTAFQIVDDVLDYSG 220
>gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
Length = 324
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPDDLAKVNAVINQAVQSDVALI-SQIGTYIISA------GGKRLRPIITILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYVQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
12804]
gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
Length = 345
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++D ++ L + + + L++A GGK++R LV
Sbjct: 27 ADIQRLVASDMGQVDALIRGRLHSRVDLI-VEVVEHLIAA------GGKRLRPMLVILAG 79
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ IE IH +L+HDD+ +D +RRG+ T + + + A++ G+
Sbjct: 80 RACGGHGQGLHKLATIIEFIHTSTLLHDDV--VDESSMRRGRSTANAIWGSLPAVLVGDF 137
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ + I + L LQ + + + +DE + K
Sbjct: 138 LYSRSFQLMVELGSMQIMQIIGKTTNQLAEGEILQLLH------VHNPDVDEAAYMQVIK 191
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + +GAI+A A + + R+ FGE+LG FQ+ DD+LD D
Sbjct: 192 HKTAVLFAASTTAGAILAGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAE 244
>gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9215]
gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9215]
Length = 323
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEFCLTSKHKRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_ANIW141M18]
Length = 283
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+N L K+I+ +LD S ++ ++YAL GGK+IR ++
Sbjct: 8 INPLLEKY-SAYIKKINNVLD-------SELELYTESEFKEPLKYALDGGKRIRPIILLL 59
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L AIE +H S+IHDD+ +DN +RR K HI+Y +++ G
Sbjct: 60 SSECVGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNISVLTG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L I S + + ++ ++ E + +
Sbjct: 118 DFVLGLILNIASRINNPRVTKNLATTAMMMSEGEVIES------RLEASEDVTFDDYLKV 171
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KT A GAI++ ++ E E L +G+N+GI +Q+ DDLLD
Sbjct: 172 IEYKTATAFETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLD 220
>gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521]
gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521]
gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 288
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 12/234 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ K I+ LD+ + +N + A Y++ +GGK+IR L ++
Sbjct: 2 INNLRKDINDYLDNYFKN-----KGIYNKVIYDASGYSINIGGKRIRPILFALSYYIYKN 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L + +IE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ L
Sbjct: 57 EYKNILPMACSIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDNL-LNE 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
I+ + + + + G +GM+GGQ++D+ + I + ++ + KT
Sbjct: 116 AMILMMDYSLKNGGNSLKAAYEIASSAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GAL+ + GA++A A +++ + LR +GE LG++FQ+ DD+LD D L K
Sbjct: 176 GALIRASIVGGAVLAGACESDVKILRTYGEKLGLVFQIKDDILDVVGDADVLGK 229
>gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
Length = 324
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+ L + + + L I Y L LGGK++R L A +FN ++ AL +I
Sbjct: 9 NAFLEYLETFSKIREPKNLYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSI 68
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H +SL+HDD+ MD+ +RRG+ TVH ++D TAI++G+ +L A+++ +
Sbjct: 69 EVFHNFSLVHDDI--MDDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQL---FENYDS 123
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ L + + + + + ++ + + KT L+ A + GAI+
Sbjct: 124 KTFQALAKLFSKTALEVCEGQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAIV 183
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A AS +++ + FG LGI FQL DD LD +
Sbjct: 184 AKASNEDQDGIYNFGRLLGIAFQLQDDYLDAFGNPE 219
>gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
Length = 298
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/244 (36%), Positives = 131/244 (53%), Gaps = 18/244 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L +L Q N + ++ + + +Q L A++YALL GGK+ R
Sbjct: 1 MTDSLKQQLPIFQQRNIEHLNQWFEKIEIQQQP---------LTDAMKYALLLGGKRARP 51
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+LV A++ ++ A AA+ECIH YSLIHDDLP+MDN +RRG T HI++DE T
Sbjct: 52 YLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDNDDLRRGHATCHIKFDEAT 111
Query: 116 AIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+AG+ L T AFEI+++ + ++ R ++ L+ G GM GQ LD+Q E
Sbjct: 112 AILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGASGMCMGQSLDLQAEGKQV 171
Query: 175 T--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231
+ I KTGALM A + GA+ A + +L + + +G+ FQ+ DD+LD
Sbjct: 172 DLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKYADAIGLAFQVQDDILDIT 231
Query: 232 EDLP 235
D
Sbjct: 232 SDTE 235
>gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617]
Length = 299
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 12/237 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M+ L L + +R++ L + Q + L++A+ Y ALLGGK++R FLV
Sbjct: 1 MDFNL--LLTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVY 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N AAIECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+A
Sbjct: 54 ATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILA 113
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ P + R ++ L G+ GM GGQ L + + + +
Sbjct: 114 GDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNE 173
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ I + KTGAL+ A GA+ A + L F +G+ FQ+ DD+LD
Sbjct: 174 LEQIHRHKTGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTG 230
>gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083]
gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083]
Length = 284
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 14/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + S +D +L A ++ A+RYA GGK++R+FLV E A + V+
Sbjct: 1 MNDWSAEVDQHFTRVLSSFADV-------PIVQAMRYATTGGKRLRAFLVRESARVCGVD 53
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ AIE +H YSL+HDDLP MD+ +RRG+PTVH+++D+ TA++ G+ L T AF
Sbjct: 54 VARSIAPACAIEALHAYSLVHDDLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----MLDIQDEFIDETQVFMIQKMK 184
E++S P +RS L L+L G GM+ GQ + + Q+ +Q K
Sbjct: 114 ELVSEPSCHEDPLVRSTLALTLARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ ++ +GA++A A N L+ +G+ LG+ FQ+ADD+LD D
Sbjct: 174 TGALITWSATAGAVLAKADTN---ALKTYGDALGLAFQIADDILDVTSDAE 221
>gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
Length = 293
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L L+ +RI+ L+ + A + +L +A+++ AL+GGK+IR FLV
Sbjct: 2 LLESLKLYQERINQQLELRIDSLA-----DIDPQLKAAMKHGALIGGKRIRPFLVYAIGD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V T AAIEC+H YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MLGVKLSTLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--Q 181
AFEIIS P + + ++ +L + G GM GGQ +D+ +I
Sbjct: 117 QALAFEIISEPIENITPSQNLAMVRALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
K+KTGAL+ A E I A E++ L F + +G+ FQ+ DD+LD E+L K
Sbjct: 177 KLKTGALIRCAVEFAIIAAKIEGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGK 234
>gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1]
Length = 322
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEVYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 170 KTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
Length = 294
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILLHLDRYAEAVGLAFQVQDDILDIISDTE 231
>gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32]
gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
splendidus LGP32]
Length = 294
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S N+++++ LD L N L++A+RY LLGGK+ R FLV
Sbjct: 1 MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRG T HI+YDE TAI+
Sbjct: 52 ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ ++ R +++ L G QGM GQ ++ ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231
>gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 325
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
++ + I+ + + + D L I Y L LGGK++R L +F
Sbjct: 4 FEDLREIIEQEI------ASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ AL V AIE H ++L+HDDL MD +RRGK TVH ++ + TAI++G+ + A
Sbjct: 58 DYKPALEVAMAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+E ++ + L L + + M + +F+ E + + ++KT
Sbjct: 116 YEHLA---KVDSRLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAV 172
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L+ A + GAI A + + L +G ++G+ FQL DDLLD D L KK
Sbjct: 173 LLATALKMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225
>gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 322
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + + + ++ L L + SA+ GGK++R
Sbjct: 3 NFNFFNPISTEMELLEQELSKKLDSRIELLNE-------SAVHLIKAGGKRLRPAFALLS 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + + +E IH SL+HDD+ +DN RRG TV + +I AG+
Sbjct: 56 AHFYMDDLTEVIPLAVGLELIHMASLVHDDV--IDNSQTRRGTETVKSAWGNRVSIYAGD 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ A +I++ + ++ ++ + + +Q M + ++
Sbjct: 114 FIFARALSLIATYERSNVVDVLAEASMKICEGEIIQMMSCYNVKLGLKNYLRR------I 167
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L+ +C+ GA++A+A + E LR +G LG+ FQ+ DD+LD D L K
Sbjct: 168 ERKTALLISVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIADEQVLGK 225
>gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
Length = 331
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 103/236 (43%), Gaps = 12/236 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ L+E S + +++ L L A Y GGK +R L
Sbjct: 2 SDVTDVLKEYSADVIKTIEENLA-------PVQPQNLQDACIYLTKAGGKMLRPALTLIS 54
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N AL+ AAIE IH +SLI MD+ +RRG P+VH +DE AI+AG+
Sbjct: 55 CEAVGGNKEDALKTAAAIELIHTFSLI--HDDIMDDDDMRRGMPSVHKVWDEPLAILAGD 112
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
L + AFE+I S K + L+ + ++ G + D +
Sbjct: 113 TLFSKAFEMIISSKEENAHPEHVANALATVADACVKICEGQASDMSFEGDFDVKEAEYSE 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A ++GAIM A + E L +G +GI FQ+ DD LD D
Sbjct: 173 MIYKKTGALIAAATKAGAIMGGADEKEVTALYEYGRMIGIAFQIQDDYLDVISDEK 228
>gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
Length = 295
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + R++ L+ L + + M+ RL A+RY+++ GGK++R L
Sbjct: 2 IDAYQASSQARVNAALEPLFVAPSPQMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE AI+AG+GL
Sbjct: 57 ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMI 180
+ AF + P + M++ + G + +
Sbjct: 117 QSLAFSALLDPGLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ A + GA+ + A + L+ + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HRHKTGALIEAAVQLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGK 236
Query: 237 K 237
+
Sbjct: 237 R 237
>gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae]
Length = 302
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/244 (35%), Positives = 126/244 (51%), Gaps = 13/244 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M + Q R++ L + + + +L++A++Y ALLGGK++R FLV
Sbjct: 1 MTLSFADQRQWVQNRVNKTLLNQFQRL-----PFNQSQLVAAMKYGALLGGKRLRPFLVY 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ NV AA+ECIH +SLIHDDLP+MDN +RRG+PT HI + E AI+A
Sbjct: 56 AIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAMDNDNLRRGQPTCHISFGEAHAILA 115
Query: 120 GNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF+I+S + D R ++ L G GM GGQ ++ + + ID T
Sbjct: 116 GDALQTLAFDILSRSAMPDVSDTYRLAMIAELATATGAAGMCGGQALDMESEGQQIDFTT 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ I KTGAL+ A A+ A L + +G++FQ+ DD+LD D
Sbjct: 176 LETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLLDNYANAIGLLFQVHDDILDVTGDTD 235
Query: 234 -LPK 236
L K
Sbjct: 236 ILGK 239
>gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
Length = 294
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N+ +++ L L N L+ A+RY LLGGK+ R FLV
Sbjct: 1 MQEALTSFQQRNNDQLNLWLQAL---------PHQNQPLIEAMRYGLLLGGKRARPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + +A+ECIH YSLIHDDLP+MD+ +RRG+ T HI++DE TAI+
Sbjct: 52 ITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQTTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R +++ L G GM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILADGDLHPNAEVNRIKMIKVLADASGANGMCLGQALDLAAENRSVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A +L + + +G+ FQ+ DD+LD D
Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYADAVGLAFQVQDDILDIVSDTE 231
>gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
Length = 310
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 91/244 (37%), Positives = 127/244 (52%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
KL +R+D L+ L + L A+ Y ALLGGK++R FLV
Sbjct: 8 TDAFRHKLDSAHQRVDDALNQALSAL-----PFTDMPLGKAMHYGALLGGKRLRPFLVYA 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F V L AAIECIH YSLIHDDLP+MD+ +RRGKPT HI++ E AI+AG
Sbjct: 63 VGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTCHIEFGEANAILAG 122
Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L AFEI++ +P + R ++ L GL GM GGQ L+ +D+ ID +
Sbjct: 123 DALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGMCGGQALDLEAEDKSIDLASL 182
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
I KTGAL+ A GA A + + L + ++G+ FQ+ DD+LD +
Sbjct: 183 EKIHLHKTGALIRAAVRLGAFSAGSKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242
Query: 234 LPKK 237
K+
Sbjct: 243 TGKR 246
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
Length = 300
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 128/244 (52%), Gaps = 13/244 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+N + ++ + I+ L + L + + + ++ A+ Y+LL GGK++R L+
Sbjct: 3 LNLDFKVQKEQKVREIEDSLQNYLPKQKGYQKI-----IMEAMGYSLLAGGKRLRPMLMK 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E +LF + AAIE +H YSL+HDDLP+MDN RRG+ T H+ Y E AI+A
Sbjct: 58 ETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILA 117
Query: 120 GNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ LL YAFE + + L G+ GMLGGQ++D+++ ++
Sbjct: 118 GDALLNYAFETAVKAFVLEPEDSMTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKD 177
Query: 178 --FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
I ++KTGAL+ A GAI+ ASQ E + + +G+ FQ+ DD+LD
Sbjct: 178 VLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQE 237
Query: 233 DLPK 236
+L K
Sbjct: 238 ELGK 241
>gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 322
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEVYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 170 KTAMLFEASTHSAAALAEATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 17 DTILDDLLLQTASHM--QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
D ++ + ++ L A+ Y+L GGK+IR L+ +
Sbjct: 8 DKVIPSFEEEMLGYIGENGIKKAPLHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGY 67
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
V AA+E IH YSLIHDDLP+MDN +RRGKPT HI Y E TAI+AG+ LLT AFEII+
Sbjct: 68 AVSAALEFIHTYSLIHDDLPAMDNDDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIAV 127
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ ++ L L+ + + + + + + ++ I + KTG L+ F
Sbjct: 128 SDASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPI 187
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++A A+ +E+L + E++G+ +Q+ DD+LD ++
Sbjct: 188 YAACVIADAATEVEEQLMGYAEHIGLAYQIRDDILDVIGNVE 229
>gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
Length = 321
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L + L I+Y L LGGK+IR L ++F ++ AL
Sbjct: 4 IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALN 63
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AIE H +SLIHDD+ MDN +RRGKPTVH ++D I++G+ +L A++++
Sbjct: 64 AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDC 121
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+++ + L + Q M + + + + KT L+ A +
Sbjct: 122 PSKIFQELVKTLSETALKVCEGQQMDMDF---EKLQEVSIEAYMQMISYKTSVLIGAALQ 178
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
G+I++ ++ + + FG NLGI FQL DD LD D KK
Sbjct: 179 MGSIISETTKENQINMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223
>gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440]
gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440]
Length = 322
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEVYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 170 KTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
LQE ++ +L+ ++ + RL AI Y+L GGK+IR LV
Sbjct: 2 LQEKLT-MNRDFLNLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGG 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N L G A+E IH YSLIHDDLP+MDN RRGK T H ++DE TAI+AG+ LLT A
Sbjct: 61 NAHDGLPFGIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+ I + + + + +LS + + + + ++ I KTG
Sbjct: 121 FQCILNTQLNAEIKLSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGE 180
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A S I+ + + + E+L G+N+G++FQ+ DD+LD E
Sbjct: 181 LIRAAIVSAGIIMNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFE 228
>gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
Length = 291
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L S L+ ++ L + + A+ Y++ GGK++R L+ A
Sbjct: 2 ELRSYLRSRGALVNGYLQ-------VRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ V A +E IH YSLIHDDLPSMDN RRG+ T H + + A++AG+G
Sbjct: 55 DAVGAKGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
LLT AFE++ + + +++ + G GM+GGQ + +D+ + Q+ +
Sbjct: 115 LLTQAFEVMLEQRGVDP-KVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKL 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGA+ A GA++ A + F G+ FQ+ DD+LD E D
Sbjct: 174 HEAKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAK 228
>gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
furnissii CIP 102972]
gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
furnissii CIP 102972]
gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218]
Length = 294
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S N++++D L+ L N L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSFQHRNNEQLDLWLNRL---------PNQNLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +AIECIH YSLIHDDLP+MD+ +RRGKPT HI++DE TAI+
Sbjct: 52 ITGQMLGCEPSDLDTPASAIECIHAYSLIHDDLPAMDDDELRRGKPTCHIKFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ + +++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGTLSDAGEMNRVKMIQALAEASGAQGMCLGQALDLAAENRLVALDE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D
Sbjct: 172 LENIHRNKTGALMRCAIRMGAMAAGHKGLDVLPHLDRYADAVGLAFQVQDDILDIISDTE 231
>gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1]
Length = 322
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 TFYRAVADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEVYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 170 KTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC
BAA-286]
Length = 326
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 9/226 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
D +LD + + L I Y L LGGK++R L +L+ + +
Sbjct: 8 FDEVLDIVNTRITQINYKNKPQSLFDPITYILSLGGKRVRPALALMSYNLYKEDVERVIP 67
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ AIE H ++L+HDDL MD +RRGKPTVHI++++ TA+++G+ +L A++ I+
Sbjct: 68 IALAIEVFHNFTLLHDDL--MDRADMRRGKPTVHIRWNDNTAVLSGDAMLIEAYKEIAKT 125
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
++ + + T Q M Q + + + ++KT L+ A +
Sbjct: 126 DSEQLPRVLDLFSETATEICCGQ---QYDMEFEQRLDVTIPEYLEMIRLKTAVLLGCALK 182
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
GAI+A A + + L FG N+G+ FQL DDLLD D KK
Sbjct: 183 EGAIVAGAPDADADNLYEFGINVGLGFQLKDDLLDVYGDSESFGKK 228
>gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 324
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + + S GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
Length = 341
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + + +D ++ L + Y + GGK++R LV A
Sbjct: 29 IAADMQAVDALIRKALYSDVV--------LIRQVAEYIINSGGKRLRPALVLFSAGAVGY 80
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
R+ A +E IH +L+HDD+ +D +RRG T + + +++ G+ L T A
Sbjct: 81 RGTQHHRLAAVVEFIHTSTLLHDDV--VDESELRRGNKTANALFGNAASVLVGDFLYTRA 138
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + I + + LQ + + ++ + + KT
Sbjct: 139 FQMMVEVDSMRVMQILADATNIIAEGEVLQLLNC------HNADVEVEDYLRVIRYKTAK 192
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L A GA++ A +E + FG +LG FQL DD+LD D
Sbjct: 193 LFEAASRLGAVLGGADPALEESMAAFGMHLGTAFQLIDDVLDYSADEA 240
>gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 341
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 14/232 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
M L S I+T L++ + ++ ++ A+RY++L GGK+ +
Sbjct: 46 MQFDLRSYWTTLISEINTKLEE-------AIPVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+
Sbjct: 99 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L F I S + +++ + ++G GM GQ LD++
Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAP---NS 215
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD+L
Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVL 267
>gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Mesorhizobium loti MAFF303099]
gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase
[Mesorhizobium loti MAFF303099]
Length = 305
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 112/242 (46%), Positives = 155/242 (64%), Gaps = 7/242 (2%)
Query: 1 MNGG----LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L + ++ +L LL + DRL++A+R+ +L GGK++R
Sbjct: 1 MTNDDEMAFEMALIRRAAAVEVLLRRLLDDRPLSGEIARPDRLMAAMRHGVLNGGKRLRP 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
FLV E A+LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE T
Sbjct: 61 FLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEAT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ LLT AF+I++S T L + R+ L+L+L G GM+GGQ LD++ E
Sbjct: 121 AILAGDALLTLAFDIVASEATVLPADRRAALVLALARAAGAGGMVGGQKLDLEAEQTPPD 180
Query: 176 QVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +I Q MKTGAL+ FACE+GAI+A A ++ERL FG +G+ FQLADDLLD D
Sbjct: 181 EAGIITLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAIGLAFQLADDLLDLTAD 240
Query: 234 LP 235
Sbjct: 241 AG 242
>gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 294
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M +KL + +R++T +D LL +H RL A+RY++ GGK++R LV
Sbjct: 1 MEASFKAKLSQYQQRVETGIDTLLPSEDTH-----PVRLHRAMRYSMEAGGKRLRPVLVL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L + + + AIEC+H Y+LIHDDLPS+DN +RRG+P+ H Q+DE TA++A
Sbjct: 56 ALSELAD-SGQDPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+ LLT+AFE++S + + + + + G Q + +
Sbjct: 115 GDALLTFAFELLSREYASSPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTLQ 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KT AL+ A G + ++ G +LG+ FQ+ DD+LD
Sbjct: 175 YIHENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATSSAE 231
>gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus
torquis ATCC 700755]
gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus
torquis ATCC 700755]
Length = 324
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L I Y L LGGK++R LV A +F A+ AIE
Sbjct: 10 SFLEYMEAQVPKKEPRNLYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAMDAALAIE 69
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
H +SL+HDD+ MD+ +RRG+ TVH +++ T I++G+ +L A+++ + +
Sbjct: 70 IFHNFSLVHDDI--MDDAPLRRGQQTVHEKWNINTGILSGDAMLINAYQL---FENYPAE 124
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ + L I + + + + + + + + KT L+ A + GAI++
Sbjct: 125 HFKPLAELFTKTAIEVCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGAALKMGAILS 184
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
SQN + ++ FG LGI FQ+ DD LD +
Sbjct: 185 DVSQNVQNKIYEFGRLLGIAFQIQDDYLDTFGEQA 219
>gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591]
gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591]
Length = 303
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 84/245 (34%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M +L + +RID L + + L++A+ + ALLGGK++R FLV
Sbjct: 1 MT-DFLKQLAAHHQRIDAALSHFISAL-----PFQSSPLVAAMAHGALLGGKRLRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + + AA+ECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A
Sbjct: 55 STGRLFAIAQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ P + D R ++ L G+ GM GGQ L+ + +D
Sbjct: 115 GDALQTLAFSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQT 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYADAIGLAFQVQDDILDVIGDSA 234
Query: 235 --PKK 237
K+
Sbjct: 235 TTGKR 239
>gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
fischeri MJ11]
gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
fischeri MJ11]
Length = 298
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 18/244 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L +L N ++++ L+ + +Q L A++Y+LL GGK+ R
Sbjct: 1 MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQQP---------LTEAMKYSLLLGGKRARP 51
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+LV A + + A AAIEC+H YSLIHDDLP+MDN +RRG T HI+YDE T
Sbjct: 52 YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 111
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFI 172
AI+AG+ L T AFEI+++ + R ++ L+ G GM GQ L + + +
Sbjct: 112 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 171
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
D T + I KTGAL+ A + GA+ A + +L + + +G+ FQ+ DD+LD
Sbjct: 172 DLTSLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDII 231
Query: 232 EDLP 235
D
Sbjct: 232 SDTE 235
>gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
Length = 321
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L + L I+Y L LGGK+IR L +F ++ AL
Sbjct: 4 IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALN 63
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AIE H +SLIHDD+ MDN +RRGKPTVH ++D I++G+ +L A++++
Sbjct: 64 AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDY 121
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+++ + L + Q M + + KT L+ A +
Sbjct: 122 PSEIFQELVKTLSETALKVCEGQQMDMDFEKLQEVSI---EAYMQMISYKTSVLIGAALQ 178
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
G+I++ ++ + + FG NLGI FQL DD LD D KK
Sbjct: 179 MGSIISETTKENQMNMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223
>gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
Length = 290
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
R++ + + S + + + RL ++ Y+L GGK+IR V N + L
Sbjct: 6 RMNKQFLQDIEEVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGL 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
G A+E IH YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I+
Sbjct: 66 SFGVALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITE 125
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
K + +LS ++ + + ++ Q+ + KTG L+ A
Sbjct: 126 GKFDADIKLPLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAF 185
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I+ + + + L G N+G++FQ+ DD+LD E
Sbjct: 186 VAAGIIMKLTDEKIQLLDQIGRNVGLMFQIQDDILDVEGSFE 227
>gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242]
gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase
[Methanococcoides burtonii DSM 6242]
Length = 322
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L ++++ S +D + + L H + L A RY GGK++R ++
Sbjct: 2 DLMDEIKKRSVYVDKGIGEFL-------PISHPEELYRASRYLPDAGGKRLRPAVLMLST 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ + A+E +H ++L+HDD+ MDN +RRG P VH+++ AI+AG+
Sbjct: 55 EAVGGDPMSVIPAAVALELVHNFTLVHDDI--MDNDDVRRGMPAVHVKWGSEGAILAGDT 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFEI+S + + ++ +LS T +G + + E + + +
Sbjct: 113 LYSKAFEILSVMEKDPERILKCVALLSRTCTEICEGQWMDIEF-ENRDTVSEEEYLEMVE 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
KT L A + GA++ AS + + FG +GI FQ+ DD++D
Sbjct: 172 KKTSVLYGAAAKVGALLGGASDEVADAMYEFGRLVGISFQIQDDVID 218
>gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265]
gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium phaeovibrioides DSM 265]
Length = 335
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 82/232 (35%), Gaps = 13/232 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
K +E RI+ L T + L + RY L G GK+IR FL +
Sbjct: 14 EKKYREYHTRINDALGQCFSAT-------TPETLYAPARYILEGKGKRIRPFLTLLASEA 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + ++V A+E +H ++L+HDD+ + R +
Sbjct: 67 VSGSSDNTMKVALAVEVLHNFTLMHDDIMDEADLRHNRPTVHRKWDDNVAILSGDMMIAY 126
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+Y + + + M D + K
Sbjct: 127 SYELALQAESHRHCELIHILNHANITICEGQALDMELEDKTDATI-----ADYLDMISKK 181
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
TG L+ A E+G + A A++ + L FGE +G FQ+ DD LD + K
Sbjct: 182 TGRLISAALEAGGVAADATKEQLMSLVTFGEKIGRAFQIQDDYLDIMAENGK 233
>gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
Length = 325
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
++ + I+ + + + D L I Y L LGGK++R L +F
Sbjct: 4 FEDLREIIEQEI------ASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ AL V AIE H ++L+HDDL MD +RRGK TVH ++ + TAI++G+ + A
Sbjct: 58 DYKPALEVAMAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+E ++ + L L + + M + +F+ E + + ++KT
Sbjct: 116 YEHLA---KVDSRLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAV 172
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L+ A + GAI A + + L +G ++G+ FQL DDLLD D L KK
Sbjct: 173 LLATALKMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225
>gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 289
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 9/231 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ ID L + S+ N + + Y++ +GGK+IR L+ SL+
Sbjct: 2 EIDNLKNVIDEYLKKYFINRNSY-----NKTVYESAGYSVNIGGKRIRPTLLILTYSLYK 56
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N + + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL
Sbjct: 57 DNIEKIMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNE 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A ++ + + ++ G +GM+GGQ++D + I + ++ + + K
Sbjct: 117 AMTLL-MKSSLELGESALRASYEISKAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TG L+ + +G I+A+ + E L +G+ LG+ FQ+ DD+LD
Sbjct: 176 TGELIRVSIVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEE 226
>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
Length = 296
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT-ECASLFNVNHLTA 72
++ + L + + L A+ Y++ GGK+IR L+ AS +
Sbjct: 13 AVEKEILSFLDEH------TTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPV 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS
Sbjct: 67 YQVAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLIS 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L++ ++ + + + ++ I + KTG L+ +A
Sbjct: 127 MAHLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G I+A + L+ E+LG+ FQ+ DDLLD
Sbjct: 187 LLAGGILAKQPEEIILLLQRLAEHLGLAFQIRDDLLDVIG 226
>gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
Length = 330
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D+ + + L A Y GGK +R L + + +L+ AAIE
Sbjct: 13 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 72
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH +SLI MD+ +RRGKP VH +DE AI+AG+ L + AFEII + +
Sbjct: 73 LIHTFSLI--HDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNT 130
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAI 198
+ L+ + ++ G ++ D ++ + KTGAL+ A ++GAI
Sbjct: 131 PTQLSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAI 190
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
M A+Q + + +G +G+ FQ+ DD LD D
Sbjct: 191 MGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEE 227
>gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote
Alv-FOS1]
Length = 352
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 99/254 (38%), Gaps = 24/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
M S + + +I+ L + + + + ++ L A+ Y L GGK++R+
Sbjct: 1 MPDDWNSFMDKYKSKIEDTLSEFFEKKKTEV---NHPLLREAVEIIEEYTLRGGKRVRAL 57
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS--------------MDNGYIRR 102
L+ ++ ++ A +E + Y LIHDD+ + ++ R
Sbjct: 58 LMILGYRMYGGKDDEIIKAAATLELVQSYFLIHDDIMDESDLRRGKKTVHKIYEEEHLHR 117
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
G P ++ E IIAG+ YAFEI + + R+ L G L
Sbjct: 118 GFPGNPARFGENLGIIAGDLANVYAFEIFAETEFDSDRKERALQELERIMEYTGYGQLID 177
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ EF ++ + + + + GAI+A A LR F +GI FQ
Sbjct: 178 VYSSMLPEFGEKDLLLLHEYKTANYTIYGPLALGAILAGAEPE---SLRDFAIPIGIAFQ 234
Query: 223 LADDLLDCEEDLPK 236
L DD+L D K
Sbjct: 235 LQDDILGLFGDEKK 248
>gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
MPOB]
gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
MPOB]
Length = 323
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 20/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + S++Q + +RI+ ++ LL + + RY + GGK++R L+
Sbjct: 1 MKESIISRIQPDLRRIEEEIELLLTTSVPLISVVG--------RYIMGSGGKRLRPLLLV 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L + E IH SL+HDD+ +D+ RR +P + + ++
Sbjct: 53 LSARLCGYQGSHDASLAVVFEFIHAASLLHDDV--VDHAKFRRNRPAANTVWGNQAVVLV 110
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + A + + + S+ ++ LQ + + ++E+I+
Sbjct: 111 GDFLYSKAIHLTVGYNSLRMLEVLSEATTRMSEGEVLQLVHADNIEISEEEYIEVITRKT 170
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ AC+ GA+ ++ L+ +G NLGI FQL DD LD D L K
Sbjct: 171 AV------LISAACQIGALFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDVKELGK 224
>gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302]
gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302]
Length = 291
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L +I Y++ GGK+IR +L+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVP 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AA+E IH SLIHDDLP+MDN RRG+ T H Y E AI+AG+ L
Sbjct: 58 ITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + ++ ++ I KTG
Sbjct: 118 YALIAQADLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ F ++ I+A +N +++L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLSFPFQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7]
gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7]
Length = 299
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 8/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L S + + + D + + + ++L A+ Y++ GGK+IR L+
Sbjct: 1 MN--LKSFKENVIPSFEKEMLDYIGKELT-----KKEKLHEAMSYSIAAGGKRIRPLLLL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AA+E IH YSLIHDDLP+MD+ +RRGKPT HI Y E AI+A
Sbjct: 54 ATIQSLGGDIKKGYAASAALEFIHTYSLIHDDLPAMDDDDLRRGKPTSHIVYGEDIAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT AFEII+ + ++ L+ + + + + + ++ ++
Sbjct: 114 GDALLTQAFEIIADSDESSEKKVKLISALAKSAGPKGMILGQMADIQGEKKSLNLEELQF 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTG L+ F + ++A + +E+L + E++G+ +Q+ DD+LD D+
Sbjct: 174 IHRNKTGELLKFPIYAACVIADTTTEIEEQLMGYAEHIGLAYQIRDDILDVIGDVA 229
>gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
Length = 324
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + A T+ L + Y L +GGK+IR L+ +L+ +
Sbjct: 6 ELLEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A+ ++
Sbjct: 66 TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPV 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M + + E + + ++KTG L+ + + G
Sbjct: 124 DCLKEVMELFSLTALEICEGQQM---DMEFELRKDVREEEYLEMIRLKTGVLLAASLKIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ AS + L FG NLG+ FQL DDLLD D+
Sbjct: 181 ALLGGASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDVA 219
>gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
Length = 292
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/235 (33%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + Q + + +L+ L + + L A+RYA+L GGK++R LV +
Sbjct: 1 MKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AAIE IH YSL+HDD+P+MDN +RRGKPT H++Y E TA++ G+ L
Sbjct: 56 LGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AF+++S T+L + ++ L G +GM GGQ +D + + + +
Sbjct: 116 QTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMH 174
Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ A G++ + S++ L + LG+ FQ+ DD+LDCE D
Sbjct: 175 SLKTGALIRAAVVLGSMSCPNLSEDSLAILDDYAAKLGLAFQVIDDVLDCEADTA 229
>gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2]
gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2]
Length = 314
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L Q + +++ L + L A+RYA+L GGK++R LV
Sbjct: 15 DLGGWQQNHLAQVEQALSQ-------WVGHGAPAGLGEAMRYAVLDGGKRLRPLLVLAAY 67
Query: 63 SL-FNVNHLTALRV-------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ A+E IH YSL+HDDLP MDN +RRGKPT H+++
Sbjct: 68 QAVCSGQPAPCAWHDAAALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKPTAHVRFGPA 127
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A++AG+ L +AFE+++ + ++ L L G GM GGQ +D+ +
Sbjct: 128 RALLAGDALQAFAFELLTPEDMPIPAATQAALCRLLARAAGSTGMAGGQAIDLASVGLRL 187
Query: 175 TQVF--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T+ + ++KTGAL+ + GA+ A+ L +G LG+ FQ+ DD+LD
Sbjct: 188 TEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAAYRALSDYGAALGLAFQVVDDILDVVA 247
Query: 233 DLP 235
D
Sbjct: 248 DSA 250
>gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266]
gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium phaeobacteroides DSM 266]
Length = 332
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
MN + +L ++ + ++++ L + L + +Y L G GK+IR FL
Sbjct: 1 MNMSITQELVEKKYRLYHNLINEALASC---FSAEAPVTLYAPAKYILDGKGKRIRPFLT 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + AL+V A+E +H ++L+HDD+ MD +R G+PTVH Q++ AI+
Sbjct: 58 LLASEAVCGSSEHALKVALAVEILHNFTLMHDDI--MDQAELRHGRPTVHKQWNANVAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+G+ ++ YA+E+ + + + + NI + + + +
Sbjct: 116 SGDMMIAYAYELALQSPSSRQIE---LVHILNDANITICEGQALDIELEEKKHATIADYL 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ K+G L+ A E+G + +A+ + L FGE +G FQ+ DD LD D K
Sbjct: 173 DMIAKKSGRLISAALEAGGVAGNATDEQLNNLVTFGEKIGRAFQIQDDFLDIMADDGK 230
>gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
Length = 290
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 13/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
++ + + ++L Q + + ++YA L GGK+IR L+ SL
Sbjct: 1 MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AA+E IH YSL+HDDLP+MDN RRG+ T H ++ E I+ G+ LLT A
Sbjct: 55 ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114
Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
F ++ ++ +++ + G+ GM+GGQ +D+ + I + I + K
Sbjct: 115 FSVMVRGSIGKVPSEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
TG L+ I+ AS ++E L +G+ +G+ FQ+ DD+LD E +L K
Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229
>gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437]
Length = 323
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + L+++ + ++ L+ ++T H D SA GGK++R V
Sbjct: 4 ADIYNSLKQDLREVERELE-------KSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ +V +E IH +L+HDD+ +D+ RRG+PTV ++D A+ G+
Sbjct: 57 KFGEYDVDKLKQVAVPLELIHMATLVHDDV--IDDASTRRGRPTVKAKWDNRVAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+L + I+S + + S + + Q ++ K
Sbjct: 115 ILGRSLAIVSQIEDPKIHRVLSPAIYQMCRGEIEQIRDFFATDPSLIRYLHR------IK 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT LM +CE GA+++ A+ E RLR FG +G+ FQ+ DD+LD D L K
Sbjct: 169 RKTALLMSVSCELGALVSGAAPAEVRRLRLFGYFVGMAFQITDDILDLTGDEQTLGK 225
>gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 313
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ +++D +L L + + Q ++SA GGK++R L+ +
Sbjct: 1 MDAAMRQVDAVLRARLSSKVALI-DQIASYIISA------GGKRMRPRLLLLFSEALGFR 53
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L + +F
Sbjct: 54 GPERYELAAVVELIHTSTLLHDDV--VDESSLRRGRATANSMFGNAAAVLVGDFLYSRSF 111
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ S K+ + ++ + LQ M D + + + + KT L
Sbjct: 112 QMMVSVKSMRVLEVLAEATNVIAEGEVLQLMNM------HDADLAVDEYLRVIRFKTAKL 165
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ GA++A AS +E +G +LG FQL DDLLD E +L K
Sbjct: 166 FEASARLGAVLAGASAEVEEACADYGRSLGTAFQLVDDLLDYEGNASELGK 216
>gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2]
Length = 291
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
+ + L R++ L LL Q S+ LL AI+YA L GK++R LV
Sbjct: 1 MKTTLLRYQNRVNQKLKALLDQQTSY-----PASLLEAIKYATLNNGKRLRPALVYAVGE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
N++ A+E IH YSL+HDDLP+MD+ +RRG+PT HIQ+DE TAI+ G+
Sbjct: 56 SMNISLDKLDAAACAVELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQ 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQK 182
T AFE +S + + L + G + G + + + E + +
Sbjct: 116 QTLAFEALSQDAFLADSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMHE 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTGAL+ + GA + ++ L G+ +G+ FQ+ DD+LD E
Sbjct: 176 MKTGALITASLLMGAAQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIEGSTE 228
>gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
Length = 288
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 15/236 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ RI L L +D + +RYA GGK++R FL E A+L
Sbjct: 2 FKTALRDAQTRIGDFLTRQLADL-------GDDTIAQGMRYATGGGKRLRGFLALESAAL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+V AL A+EC+H YSL+HDDLP MD+ +RRG+PTVH ++D+ TA++ G+ L
Sbjct: 55 FDVPPGQALYAAGAVECLHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDDATAVLVGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMI 180
T+AFE+IS + + SL G QGM+ GQ DI E ++ +
Sbjct: 115 TFAFELISREDAGTAEERVAL-TASLAKASGAQGMVLGQAQDIAAETAGRALTLQEITGL 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
Q KTG L+ + +GA++ A L+ + +G+ FQ+ADD+LD E D K
Sbjct: 174 QANKTGRLIEWPAHAGAVLGGADP---APLQRYARAIGLAFQIADDILDVEGDAAK 226
>gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
Length = 300
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFL 57
MN L L+ R + L L Q + L+ ++Y LLGGK+ R FL
Sbjct: 1 MNNNLTLSQSLKHYQDRSNQHLAQWLEA-----QPFADQALVKTMKYGTLLGGKRARPFL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ AA+ECIH YSLIHDDLP+MD+ +RRG PT HI +DE AI
Sbjct: 56 TYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDE 174
+AG+ L T AFEI++ + + R ++ L G GM GQ L+ + + +D
Sbjct: 116 LAGDALQTLAFEILADGQLSDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKRVDL 175
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
++ I K KTGAL+ A GA+ A +L F + +G+ FQ+ DD+LD D
Sbjct: 176 QKLEAIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSD 235
Query: 234 LP 235
Sbjct: 236 TE 237
>gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
5456]
Length = 336
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 12/242 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVT 59
M G LP + KR+ +++D + + A + GGK++R +V
Sbjct: 1 MTGQLPESVVAYLKRVASLVDGYIYAKVK----GEPKEVYDAGLHLIRAGGKRLRPAIVV 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A AL AA+E +H ++LIHDD+ MD RRG PTVH + E AI A
Sbjct: 57 AIAEALGEPAERALPFAAAVELVHNFTLIHDDI--MDRDEFRRGVPTVHKVWGEPLAITA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
G+ L AFE ++ + R + G M + +E + +
Sbjct: 115 GDLLFAKAFETLTDALDKGIPPDRVARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEY 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
++ KTGAL + G ++A E+L FG+NLGI FQ+ DD+L +L
Sbjct: 175 LIMIYKKTGALFEASAVLGGLVATGDDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEEL 234
Query: 235 PK 236
K
Sbjct: 235 GK 236
>gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
345-15]
gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
345-15]
Length = 338
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 12/240 (5%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + +++ +++ + D++ + L +A + + GGK++R +V
Sbjct: 1 MTFDDMNELVEKYVPLVNSDIYDVV--------KGAPEELYNASLHLIKAGGKRLRPLVV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A + A ++ MDN RRG PTVH Y AI
Sbjct: 53 LATARALGGVDAEARAIPLASAVEIFHNFTLVHDDIMDNDDFRRGVPTVHKVYGVPLAIT 112
Query: 119 AGNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ- 176
AG+ + + I+ S + L + + + +LT G + + + + +
Sbjct: 113 AGDLMFSLSFASILRSLEKGLDEEYVIKAVQALTEASRKVAEGQGYDMLFERSWNVDAED 172
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KTGAL+ + + GAI A A E + +G +G+ FQ+ DD+L D K
Sbjct: 173 YLRMIYLKTGALVEASAKLGAIAAKAKDEVIETMGEYGRLVGLAFQIRDDILGVFGDPSK 232
>gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
Length = 324
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9312]
gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT
9312]
Length = 323
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+ + + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 SEFCLTNKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ S + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 121/235 (51%), Gaps = 10/235 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
+ R ++ L L RL A+RYA LGG K++R L
Sbjct: 6 FAEWMAVTQDRAESALGRFLP-----GPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGE 60
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L VG A+E IH YSL+HDDLP MD+ +RRG+PT H+++DE TA++ G+ L
Sbjct: 61 LTGATPEALDIVGCAVEMIHAYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSL 120
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFE+++S + +++ L H G +GM GGQ +D + + + ++ ++
Sbjct: 121 QTMAFELLASQPLGEP-KQQLEIIALLAHASGSRGMAGGQAIDLASVGKPLTQPELELMH 179
Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ A GA+ S +E+ L F + G++FQ+ DD+LDC
Sbjct: 180 ALKTGALIRAAVLLGALAGQPLSADERTSLDRFAKRAGLLFQVVDDILDCTASTA 234
>gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis KF147]
Length = 285
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 7/222 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGA 77
L+D L + + + L + +Y+LL GGK+IR L F++ V A
Sbjct: 8 LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+
Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTADLS 125
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L+ + + + + ++ I ++KTG L+ F +
Sbjct: 126 AEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAG 185
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I+A S +E E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 186 IVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 292
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + L+ + + I+ L +L RL ++ Y+LL GGK+IR L
Sbjct: 2 LKTYLETSKQSIEHWLSAVLNS-----PIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
V+ A+ECIH YSLIHDDLP+MDN RRG T H Y + AI+AG+GL
Sbjct: 57 AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++ S T + + + L G +GM+GGQ D + + I ++ ++
Sbjct: 117 LTYAFQLCS-ENTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL A E G I+++A Q + + LG++FQ+ DD+LD +L K
Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233
>gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
HF10-11A3]
Length = 327
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 97/237 (40%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + E + ++ LDDL+L+ + + H +A GGK++R +V +
Sbjct: 3 SIMNTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISK 62
Query: 64 LFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + E ++ +D RRG TVH +++ A++AG+
Sbjct: 63 AISPEFCLTSKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L A +++ + S++++ L Q + ++
Sbjct: 123 LFAQASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSY 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +L+ + ++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 177 CKTASLIANSSKAAGVLSGLNDEHLTSLYDFGKNIGLAFQVVDDILDFTGNDKQLGK 233
>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
Length = 285
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 7/222 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGA 77
L+D L + + + L + +Y+LL GGK+IR L F++ V A
Sbjct: 8 LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F I+S+
Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTADLS 125
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L+ + + + + ++ I ++KTG L+ F +
Sbjct: 126 AEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAG 185
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I+A S +E E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 186 IVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227
>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
Length = 295
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 10/233 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
+ Q + + +L+ +L S RL A+RYA+LGG K++R LV A L
Sbjct: 6 NWQQRARAQAELVLERVLPAENSL-----PQRLHQAMRYAVLGGGKRLRPLLVLAAAELG 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A AA+E +H YSL+HDD+P+MDN +RRGKPT H+QYDE TA++ G+ L T
Sbjct: 61 QSEAAAAEAALAAVELVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQT 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183
AF+++S L + Q++ +L G GM GGQ +D+Q + I + ++ + ++
Sbjct: 121 LAFDVLS-RPNGLPAPRQLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRL 179
Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA+ RL + LG+ FQ+ DD+LDCE D
Sbjct: 180 KTGALIRAAVALGALSCPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTA 232
>gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090]
gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945]
gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02]
gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18]
gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19]
gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11]
gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18]
gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1]
gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1]
gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332]
gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679]
gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035]
gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2]
gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA
1090]
gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945]
gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 324
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIRVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
Length = 305
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 85/227 (37%), Positives = 124/227 (54%), Gaps = 7/227 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
D L + + + L A+RYA+L GGK++R LV + N ALR
Sbjct: 19 DPHLARVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRA 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E IH YSL+HDDLPSMDN +RRGKPTVH+++ E A++AG+ L AFE+++
Sbjct: 79 ACATELIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEG 138
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
++ +I++ L L G QGM GGQ +D+ +DE Q+ + ++KTGAL+ +
Sbjct: 139 DEIPASIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLREMHRLKTGALLQGSV 198
Query: 194 ESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E G A + LR +G +G+ FQ+ DD+LD D L K
Sbjct: 199 EMGAACAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTADSQTLGK 245
>gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
Length = 322
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ L+E+ + I++ L + Y L GGK+IR L+ CA L
Sbjct: 5 QTLLKEDLQHIESCFRQYLTSDV--------PLIRQMSDYILASGGKRIRPVLLLLCARL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N + + IE IH +L+HDD+ +D +RRG+ ++ + A++ G+ L
Sbjct: 57 SGYNGEHRYPLASVIEFIHTATLLHDDV--VDGATLRRGQVAANVTWGNDIAVLVGDYLF 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
FE++ + + + + +Q + G + + + + + K
Sbjct: 115 ARCFEMMVDFCDRRIMQVLANTTSLMAQGEVVQLINSGDLSLDE------ERYLSVVRSK 168
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T AL C AI+ S ++E L FG +LG+ FQL DD LD D K
Sbjct: 169 TAALFSATCRCAAILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVADQNESGK 223
>gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
Length = 293
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + ++E R+D L +L +A+ + ALLGGK+IR FLV
Sbjct: 2 LVNAIKEYQLRVDDQLKQRFSTLE-----DTAPQLKAAMSHGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ T + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
Length = 329
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 89/232 (38%), Gaps = 18/232 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67
+ E+ +D ++ + L + ++T ++SA GGK++R L+T A
Sbjct: 10 ISEDLAEVDRVIKERLDSPVALIRTI-ATYIISA------GGKRLRPVLLTLFARALGYG 62
Query: 68 ----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A ++ +D +RRG PT + Q+ +++ G+ L
Sbjct: 63 QTEQQRAQGHHWLMAAVVEFIHTATLLHDDIVDESTLRRGAPTANAQFGNAASVLVGDFL 122
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +F+++ + + + LQ + + + +
Sbjct: 123 YSRSFQMMVEVEQLHILKTLADATNVIAEGEVLQLLNCNDPDVDE------AAYLQVIRF 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A+ ++ +G +LG FQ+ DD+LD +
Sbjct: 177 KTAKLFEASARIGAVLAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESE 228
>gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
Length = 334
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +DT++ L + + Q D ++SA GGK+IR LV A+ +
Sbjct: 22 IAADLNAVDTVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANAYGYR 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 75 GTDHHQLAAVVEFIHTATLLHDDV--VDESSLRRGRKTANALFGNAASVLVGDFLYSRAF 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ S I + + LQ + D + E + + + KT L
Sbjct: 133 QMMVSVGDIRIMQILADATNVIAEGEVLQLLNM------HDPDVSEERYTQVIRSKTAKL 186
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A + G ++A AS +E E +G +LG FQL DD+LD D+ K
Sbjct: 187 FEAAAQLGTLIAGASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGK 237
>gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
DSM 2375]
gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
DSM 2375]
Length = 335
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D+ + + L A Y GGK +R L + + +L+ AAIE
Sbjct: 18 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 77
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH +SLI MD+ +RRGKP VH +DE AI+AG+ L + AFEII + +
Sbjct: 78 LIHTFSLI--HDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNT 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAI 198
+ L+ + ++ G ++ D ++ + KTGAL+ A ++GAI
Sbjct: 136 PTQLSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAI 195
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
M A+Q + + +G +G+ FQ+ DD LD D
Sbjct: 196 MGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEE 232
>gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
Length = 283
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 15/219 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E K+ID LD + + ++Y+L GGK+IR ++T A +
Sbjct: 17 EYIKKIDQALD-------KELDLYSESEFIEPLKYSLEGGKRIRPIILTLSAESIG--KV 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ + +DN +RR K HI+Y T+++ G+ +L +
Sbjct: 68 DDNTFAASCAVEFLHMESIIHDDIIDNETMRRQKDPFHIKYGYNTSVLTGDFVLGLILAV 127
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
S + + ++ ++ E + + + KT
Sbjct: 128 CSRLDNPRITKDLATTAMLMSEGEMIEN------RLETSEDVTFDDYLKVIEYKTATAFE 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
A +GAI+A+ ++ + E L +G+N+GI +Q+ DDLLD
Sbjct: 182 VAARTGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLD 220
>gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140]
Length = 324
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDITE------EQYIRVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
Length = 325
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+++ + D L +L L I Y + LGGK++R LV A LF
Sbjct: 3 ESIEQYRQSFDDYLQKILQF-------GEPAGLYEPIGYIMDLGGKRMRPVLVLLSAELF 55
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
AL AA+E H +SL+HDD+ MD +RRG+PTVH ++D TAI++G+
Sbjct: 56 GAPAENALPAAAAVEIFHNFSLVHDDI--MDAAPLRRGRPTVHRKWDPNTAILSGD---- 109
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQK 182
+I + + L+ + + GQ D+ E D+ + + +
Sbjct: 110 --AMLIRAYQQLDGYPPELFQPLTRLFSRTALEVCEGQQYDMDFESRDDVGIPEYLRMIE 167
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ A + GAI+ A E+E + FG LG+ FQL DD LD +
Sbjct: 168 FKTAVLLGCALQMGAIIGGAEVAEQEAVYDFGIRLGLAFQLQDDYLDVFGNPE 220
>gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
Length = 324
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPDDLAKVNAVINQAVQSDVALI-SQIGTYIISA------GGKRLRPIITILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYVQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H]
gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H]
Length = 301
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 102/247 (41%), Positives = 143/247 (57%), Gaps = 16/247 (6%)
Query: 1 MNG-----GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIR 54
MN L L I++ +D LL M L+ A+RYA L GGK++R
Sbjct: 1 MNAPTTSVSLKDALARACSEIESTIDTLLP-----MVPGDESVLIEAMRYAALGGGKRLR 55
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
FL E A+LF + ALRV A++E +H YSL+HDDLPSMD+ +RRG+P+ H Q+DE
Sbjct: 56 GFLAVEVATLFGADRKAALRVAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEA 115
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-- 172
AI+AG+ L T AFEI+ P+T +R+ L L+L G GM+GGQ++DI+ E
Sbjct: 116 IAILAGDALQTRAFEILVEPETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRAL 175
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
QV + +KTGAL+ +A ESGAI+A + + +G +LG FQ+ADD+LD
Sbjct: 176 PLDQVRRLHALKTGALIRYAAESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDSTA 235
Query: 233 ---DLPK 236
+L K
Sbjct: 236 TAEELGK 242
>gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
Length = 333
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAAWLAGDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D + RRGKPT ++ +D ++++ G+ L
Sbjct: 68 CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + +++ LQ QD E + + K
Sbjct: 126 ARSFQLMVETGSLRVMDILANASATISEGEVLQL------TAAQDLRTTEDIYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A + + L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVAALHAYGDALGIAFQIVDDLLDYGG 227
>gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21]
gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21]
Length = 322
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ I L ++ LQ +Q+ + Y L GGK+IR LV + L
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLASRLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + + + LQ + D I + + + KT
Sbjct: 118 FSLMVTDGDLRILKVLADATTIIAEGEVLQLVC------TCDLDITVERYIEVVRSKTAI 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ ACE GAI+ A ++ L +G +LGI FQL DD LD
Sbjct: 172 LLSAACEVGAILGEADPEHRQALADYGMDLGIAFQLMDDTLDYTASEE 219
>gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 129/236 (54%), Gaps = 7/236 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + + L+ ++ I+ L LL Q + +L +++Y LL GGK+IR L
Sbjct: 1 MDK-IKNILKAKAEVIEENLIKLLD-----CQDELAPQLTKSMKYTLLSGGKRIRPILTL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L N+ AL+ G+A+E IH YSLIHDDLP+MD+ +RRGK T H+ + E TAI+A
Sbjct: 55 LIAELLEGNYQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GLLTYAF++++ + + ++ + L+ +++ + ++
Sbjct: 115 GDGLLTYAFQVLADLELKPDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQK 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ + +G + EK+ L + E +G++FQ+ DDLLD +
Sbjct: 175 VHQAKTGALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETE 230
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + L+ + + I+ L +L RL ++ Y+LL GGK+IR L
Sbjct: 2 LKTYLETSKQSIEHWLSAVLNS-----PIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
V+ A+ECIH YSLIHDDLP+MDN RRG T H Y + AI+AG+GL
Sbjct: 57 AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LTYAF++ S T + + + L G +GM+GGQ D + + I ++ ++
Sbjct: 117 LTYAFQLCSENTTA-SAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL A E G I+++A Q + + LG++FQ+ DD+LD +L K
Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233
>gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
NRL30031/H210]
gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
NRL30031/H210]
Length = 324
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPDDLAKVNVVINQAVQSDVALI-SQIGTYIISA------GGKRLRPIITILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + Q + + K
Sbjct: 119 TRAFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITE------EQYLQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A + GAI+ AS ++ L+ +G +G FQ+ DD+LD +
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223
>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO]
gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
Length = 296
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT-ECASLFNVNHLTA 72
++ + L + + L A+ Y++ GGK+IR L+ AS +
Sbjct: 13 AVEKEILSFLDEH------TTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPV 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS
Sbjct: 67 YQVAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLIS 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L++ ++ + + + ++ I + KTG L+ +A
Sbjct: 127 MAHLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G I+A + L+ E+LG+ FQ+ DDLLD
Sbjct: 187 LLAGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226
>gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 327
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 24/244 (9%)
Query: 1 MNGGLP----SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M+ L S++ + + I+T L D L T + D++ + L GGK++R
Sbjct: 1 MSEDLRGYIFSRVAGDMEAIETALADNL--------TPYFDKVREIAGHILFTGGKRVRP 52
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L+ CA L + RV E +H +L+HDD+ +D +RRG P H+ +D +
Sbjct: 53 LLMVLCARLCRYDGSDDKRVSVMFEYLHTATLLHDDI--VDGAAMRRGSPAAHVVWDPAS 110
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ G+ LL + I I + ++ ++ Q G + +
Sbjct: 111 AVLVGDFLLARSASIAVDTGRIALMKILADILEDMSQGEIHQLARKGNVNLSE------A 164
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ I KT LM AC SGAI+A AS L +G NLG+ FQ+ DDLLD D
Sbjct: 165 EYRTIILHKTAVLMEGACRSGAILAGASDAHARALADYGRNLGMAFQMIDDLLDYTADTQ 224
Query: 234 -LPK 236
L K
Sbjct: 225 VLGK 228
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/238 (34%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L +R ++ LQ L A+RY+LL GGK+IR FLV
Sbjct: 4 FSEDLIALQQR-----NNQFLQQQLAQLDSSPAPLADAMRYSLLLGGKRIRPFLVYATGR 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V+ + AIECIHCYSLIHDDLP+MDN +RR PT HI +DE TAI+AG+ L
Sbjct: 59 MLGVDLAKLDHIAGAIECIHCYSLIHDDLPAMDNDTLRRNNPTCHIAFDEATAILAGDAL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+YAFE+++ + I +L+ + L +++ I ++ I K
Sbjct: 119 QSYAFELLAKSPIADQQKILQFQLLANASGAEGMCLGQSLDLISENKQIGLAELERIHKN 178
Query: 184 KTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL+ A G + ++ K++L F +G+ FQ+ DD+LD +L K
Sbjct: 179 KTGALITAAVLLGFYCSSYYQNEQIKQKLISFSAAIGLAFQVQDDILDITSSNEELGK 236
>gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568]
Length = 249
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + + + +L+ L + + L A+RYA L GGK++R LV
Sbjct: 4 TNDLKAWQLRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L H + AAIE IH YSL+HDD+P+MDN +RRGKPT HI+Y E A++ G
Sbjct: 59 ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF+++S P + +L+ L + + + +
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LDC+ D
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAAKLGLAFQVIDDVLDCDADTA 235
>gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1]
gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1]
Length = 282
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 13/233 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+++ I++ L++LL N + A+ Y+LL GK++R L + +
Sbjct: 1 MEQLRTEINSRLEELLEPLK-------NGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQI 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + + AIE IH YSLIHDDLP MDN +RRG+PT H Q+DE TAI+AG+ LL
Sbjct: 54 DYHIYMDIACAIEMIHTYSLIHDDLPGMDNDDLRRGRPTCHKQFDEATAILAGDALLNLG 113
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I + ++ L I Q + + + + Q+ I K KTG
Sbjct: 114 VNTILNISIDSDLKVKLLNRLYEASGINGMIYGQQQDITFEKQLANLEQLKDIHKHKTGE 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L+ + + G+++A+ ++ + G +LG+ FQ+ DD+LD + L KK
Sbjct: 174 LIAVSMQLGSLIAN--PSDYQYWTSIGFDLGLAFQIQDDILDVVGNTEQLGKK 224
>gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio
Cholerae
Length = 302
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 85/238 (35%), Positives = 121/238 (50%), Gaps = 14/238 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L S Q N++++D L+ + L+ A+RY LLGGK+ R +LV
Sbjct: 11 EALSSYQQRNNQQLDQWLNRI---------PFQTLPLIEAMRYGLLLGGKRARPYLVYIT 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+ G+
Sbjct: 62 GQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGD 121
Query: 122 GLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF I++ R ++ +L G QGM GQ L ++ I ++
Sbjct: 122 ALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELE 181
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGALM A GA+ A + L + E +G+ FQ+ DD+LD D
Sbjct: 182 TIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 239
>gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
Length = 335
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D+ + + L A Y GGK +R L + + +L+ AAIE
Sbjct: 18 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 77
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH +SLI MD+ +RRGKP VH +DE AI+AG+ L + AFEII + +
Sbjct: 78 LIHTFSLI--HDDIMDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNT 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAI 198
+ L+ + ++ G ++ D ++ + KTGAL+ A ++GAI
Sbjct: 136 PAQLSQTLATVADACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAI 195
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
M A+Q + + +G +G+ FQ+ DD LD D
Sbjct: 196 MGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEE 232
>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
Length = 297
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 15/245 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L+ +ID L + + + +L A+ Y+L GGK++R LV
Sbjct: 1 MTDRHEQLLKAYCAKIDEQLLRF-----TENKPELQSVVLEAMEYSLTAGGKRLRPILVL 55
Query: 60 ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E + + ++V ++E IH YSLIHDDLP MDN RRGKP+ H + E A++
Sbjct: 56 EFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMDNDDFRRGKPSCHKAFSEDIALL 115
Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ L T AFE+I+ + +++S+ + G + + + +
Sbjct: 116 AGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAIGTDGMIGGQVIDLETENEVIDI 175
Query: 178 FMIQKMKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
+ ++++ AC G +++ + + +G FQ+ DD+LD
Sbjct: 176 ETLNRLQSCKTGALIEAACVMGVVLSGKM-EYIPAAADYAQAMGRAFQIVDDILDVTGTF 234
Query: 233 -DLPK 236
+L K
Sbjct: 235 EELGK 239
>gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 333
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ + + + Q L+ A GGK++R L A L
Sbjct: 14 LAAFLAADMLAVNVLIRERMASEHAPRIPQVTAHLVEA------GGKRLRPLLTLAAARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYGGPFHVHLAATVEFIHTATLLHDDV--VDESSRRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ P +I + S+ LQ QD E + + K
Sbjct: 126 ARSFQLMVEPGNLRVLDILANASASIAEGEVLQL------TAAQDLATTEAIYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A A ++ + L +G+ LG+ FQ+ DDLLD
Sbjct: 180 TAALFSAATEVGGVIAGAPADQVKALFTYGDALGVAFQIVDDLLDYGG 227
>gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
Length = 317
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 15/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ ++ID L + + ND+L +A ++ L GGK+IR +L L N
Sbjct: 5 KNILQKIDEELKTYVDK---------NDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDN 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AF
Sbjct: 56 IREVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S K K + +++ + ++ ++ + + + + KTGAL
Sbjct: 114 EAVSRIKDNKKAHEVLKILSKACVEV---CEGQAMDMEFENYYPTMEEYLEMIRKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GA+MA ++ E+E L+ + + +G+ FQ+ DD+LD D K
Sbjct: 171 LEASVEIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 218
>gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 283
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 12/228 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + L+ K I+ I + + +RY+L GGK+IR +++
Sbjct: 5 NIEINPLLETYGKYINKI----NQALDRELSLYSESEFIEPLRYSLEGGKRIRPIILSLA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A+ + +DN +RR + HI+Y T+++ G+
Sbjct: 61 AESVG--KIDDNTLAASCAVEFLHMESIIHDDIIDNETMRRQREPFHIKYGYNTSVLTGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L I S + + ++ ++ E + +
Sbjct: 119 FVLGLILAISSRLDNARITKDLATTAMLMSEGEMIES------RLESSEDVTFDDYLKVI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KT A GAI+A S+ E E L +G+N+GI +Q+ DDLLD
Sbjct: 173 EYKTATAFEVAARIGAIIASGSEEEIEALTEYGKNIGIAYQIRDDLLD 220
>gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
Length = 323
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + A + L + I Y+L GGK++R L+T +F+ + AL
Sbjct: 5 EQMLSAIENYLAQTEFPAEPELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPA 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E H ++L+HDD+ MDN +RRGKP+VH ++ + AI++G+ ++ YA+ ++S
Sbjct: 65 AAAVEVFHNFTLLHDDI--MDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLS--- 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192
+ T N + GQ D+ E + + + ++KT L+ +
Sbjct: 120 ---SVPANLLPQVLSTFNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGS 176
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
GA++ AS + RLR F LG+ FQL DDLLD D L K
Sbjct: 177 VVIGAMLGGASDEDCRRLRRFAVELGLAFQLQDDLLDSYGDQRLGK 222
>gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
Length = 323
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+D L + S Q+ L + IRY + LGGK++R L A LF + A+R
Sbjct: 6 FIDALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRPAL 65
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+E H ++L+HDD+ MD +RRG+PTVH +++ AI++G+ +L A++++ + +
Sbjct: 66 GVEVFHNFTLMHDDI--MDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVEAD 123
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + Q M M + E + + ++KT L+ ++ E G
Sbjct: 124 KLAVALARFSRTAAEVCEGQQM---DMNFETRWDVSEAEYIDMIRLKTSVLLGYSLELGG 180
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++ A + L G N+G+ FQL DDLLD D K
Sbjct: 181 LIGGADEETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAK 219
>gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
Length = 366
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 88/238 (36%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
MN + +L ++ + T ++D L + + Q L RY L G GK+IR FL
Sbjct: 35 MNIPVTQELVEKKYRLYHTKINDALG---TCFEKQSPVTLYEPARYILEGKGKRIRPFLT 91
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + + AL V A+E +H ++L+HDD+ + R + +
Sbjct: 92 LLASEAVSGSSENALNVALAVEVLHNFTLMHDDIMDQADLRHGRPTVHLEWNVNAAILSG 151
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
Y + + + M + D
Sbjct: 152 DMMIAYAYELALQAKSSRHAELVHILNDANITICEGQALDMELEEKKDATI-----ADYL 206
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG L+ A E+G + +A+ + L FGE +G FQ+ DD LD D K
Sbjct: 207 DMIAKKTGRLISAALEAGGVAGNATDEQLRSLVLFGEKIGRAFQIQDDYLDIMADDGK 264
>gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
9202]
gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
9202]
Length = 323
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEFCLTSKHKRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEIKQNLNRFDSAQSF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C++ +++ + L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCKAAGVLSEINDENLTSLYEFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 327
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 8/224 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + + A + L + IRY L +GGK+IR L+ +L+
Sbjct: 6 ELLDYINGEIAGMSFERQPAELYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AIE H Y+L+HDDL MD +RRG TVH ++D+ AI++G+ +L A+ +
Sbjct: 66 MAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L IG + D + + ++KT L+ A + G
Sbjct: 124 VEQLGNVMGLFTETALEIGEGQQYDIEFETRADVSE--EEYIEMIRLKTSVLLACALKIG 181
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
A + A + + E L FGENLG+ FQL DD LD D KK
Sbjct: 182 AWLGDAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225
>gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
Length = 317
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 15/227 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
E K+ID L + + ND L +A ++ L GGK++R +L +L N
Sbjct: 6 EILKKIDEELKKYVDK---------NDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNM 56
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AFE
Sbjct: 57 EEILPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFE 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S+ K K + +++ + + ++ + + + KTGAL+
Sbjct: 115 AVSNIKDSKKAHDVLKILSKACVEV---CEGQAMDMKFENYNPTMEEYLEMIRKKTGALL 171
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ E GAIMA S+ EK L+ + + +G+ FQ+ DD+LD D K
Sbjct: 172 EASVEIGAIMADCSEEEKTALKEYAKRIGLTFQIQDDVLDLIGDKNK 218
>gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 332
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + AS+ +++L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGASEQVQQQLYDYGMQLGFAFQIADDVLDYAAEASDLGK 235
>gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
Length = 295
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 11/235 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
P+ L ++ ++ L +L AS + +RLLSA+RY+L GGK++R L+ E
Sbjct: 4 PAFLATHATTVEQALCAMLDARASVV----PERLLSAMRYSLMAGGKRVRPALLLESYLA 59
Query: 65 FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A AIECIH YSLIHDDLP MD+ +RRGKPT H ++DE TA++A + L
Sbjct: 60 CGGKDHAAAMPAMLAIECIHTYSLIHDDLPCMDDDDLRRGKPTCHRRFDEATAVLAADAL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AFE+++ + +R +L+ L G QGM+GGQM+D+Q E + + M++++
Sbjct: 120 QALAFELLAEAEL--DPELRLELIRKLALAAGCQGMVGGQMMDMQAEHDSDIDMLMVERI 177
Query: 184 KTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ CE+GA++A A E E +G+ +G++FQ+ADD+LD
Sbjct: 178 HLHKTGALLCWCCEAGAMLAGAGTAELEASSRYGKAVGLLFQVADDILDATASSA 232
>gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp.
BG33R]
Length = 322
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKQQLTSKVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ +
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETANAMWGNAPSVLVGDFM 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT + S A + A+ + E LR FG+NLG+ FQL DDLLD + D
Sbjct: 170 KTAMFFEASTHSAAALCGATAEQAEALRTFGDNLGVAFQLVDDLLDYKGDAE 221
>gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
Length = 316
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ +D ++ + L + RY + GGK++R L+ + +
Sbjct: 1 MREVDRVISERLDSGV--------PLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPH 52
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ A +E IH +L+HDD+ +D+ +RRG PT + + +++ G+ L + AF+++
Sbjct: 53 RHSLAAVVEFIHTATLLHDDV--VDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMM 110
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + ++ + Q M + ++E + + KT L
Sbjct: 111 VEAQSMRVMEVLAEATNVIAEGEVQQLMNM------HNADLNEAGYVHVIRSKTAKLFEA 164
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ GAI+A A + + +G+ LG FQ+ DD+LD D
Sbjct: 165 SARCGAILAGADKTLEAACADYGQALGTAFQVIDDVLDYAGDA 207
>gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
Length = 320
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S+++++ + ++ + ++ + TQ + LL+A GGK++R
Sbjct: 3 DFFSQVRKDLQVVEHEIKTIVQSRDPLL-TQTSIHLLNA------GGKRLRPAFALLAGK 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ + L + A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L
Sbjct: 56 FYHYSLEKLLPLAVALELIHMATLVHDDV--VDDSLTRRGTPTVKANWGNRISMHTGDYL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +IS + L + + + + Q F K
Sbjct: 114 FAKSLVLISQYENPLIAQVLADTSVMMCEGEMHQI------STAYSAEQSWRDYFYRIKR 167
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L+ +C+ GA+ A + E + LR +G +LG+ FQ+ DD+LD D L K
Sbjct: 168 KTALLIAASCQLGAVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVADQSLLGK 223
>gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
Length = 294
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L S Q N++++D L+ + + L+ A+RY LLGGK+ R +LV
Sbjct: 1 MIEALSSYQQRNNQQLDLWLNRI---------PFQSLPLIEAMRYGLLLGGKRARPYLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +A+ECIH YSLIHDDLP+MD+ +RRGKPT HIQ+DE TAI+
Sbjct: 52 ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I++ R ++ +L G QGM GQ L ++ + +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I + KTGALM A GA+ A + L + + +G+ FQ+ DD+LD D
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231
>gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
Length = 267
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q S + + D LL+++RY++ GK IR FLV A +FNVN L V AA+E
Sbjct: 8 LVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEI 67
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP +DN IRRG+ + H +++E AI+ G+ LLT AFEI+S+
Sbjct: 68 IHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDESPFIR 127
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
++ +L +G QGM+ GQ+LD + D + I +KT ACE G I+ +
Sbjct: 128 CC--MIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AS E L +G NLG FQ+ DD+ D +D K
Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQDKSK 220
>gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS]
gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS]
Length = 332
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 13/235 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ SK ++ +I+ L + L RY L G GK+IR FL
Sbjct: 8 AQVESKYRQYHAKINEALAACFPKEK-------PATLYDPARYILEGKGKRIRPFLTLLA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL V IE +H ++L+HDD+ MD +R G+PTVH Q++ AI++G+
Sbjct: 61 AEAVSGKSDNALGVALGIEVLHNFTLMHDDI--MDQADLRHGRPTVHKQWNVNAAILSGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
++ YA+E+ + I + Q + M Q + + +
Sbjct: 119 MMIAYAYELALKAISSRHAEIIHIFNDANITICEGQAL---DMELEQRKDVTIADYLDMI 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A E+G + + + L FGE +G FQ+ DD LD K
Sbjct: 176 SKKTGRLISAALEAGGVAGDGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230
>gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
Length = 327
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
Q+N+K + + L + + L + Y L +GGK+IR L+ +LF +
Sbjct: 3 QQNAKALQELFQTYLENLSY---AREPMGLYKPVEYVLGIGGKRIRPTLMLLAYNLFKED 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L A+E H ++L+HDDL MD RRGKPTVH Q+DE AI++G+ A
Sbjct: 60 VHAVLSQAMALETYHNFTLLHDDL--MDKADRRRGKPTVHKQWDENAAILSGD-----AM 112
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT 185
++S + + + GQ D++ E + + + ++KT
Sbjct: 113 VMLSYQFMMKDCPAMYVRPVMEVFSQTALEICEGQQWDMEFERRQDVTAGEYMEMIRLKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
L+ A + GAI+ AS+ + ++L G +G+ FQL DD LD D
Sbjct: 173 SVLLAGALKIGAILGGASEADAQKLYDLGIRIGLAFQLQDDYLDVYGD 220
>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
Length = 299
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
L ++L+ + R++ L L RL SA+ Y+LL GGK++R L
Sbjct: 4 TADLKARLRMQAARVEGYLATCLA------GRGIPPRLQSAMEYSLLAGGKRLRPVLCLS 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + ++ ++ + AAIE IH YSLIHDDLP+MD+ +RRG+P+ H Q+DE TAI+AG
Sbjct: 58 TAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
+GLLT AF++++S + + ++ G GM+GGQ LD+ D+ +
Sbjct: 118 DGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAAL 177
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MKTGAL+ +C +GA++ A + E++ +G +G FQ+ DD+LD D
Sbjct: 178 RTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEA 235
>gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter
irgensii 23-P]
gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter
irgensii 23-P]
Length = 340
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+ L S L I Y L LGGK+IR L + +F+ + AL A+
Sbjct: 25 KEFLTYLESKNWIHEPKNLYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKALPAALAV 84
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H ++L+HDD+ MD +RRGKPTVH ++D I++G+ +I + +
Sbjct: 85 EVFHNFTLVHDDI--MDAAPLRRGKPTVHEKWDTNRGILSGD------AMLILAYQYFEN 136
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
+ L L+ + + GQ LD+ E + + ++KT L+ A + G
Sbjct: 137 YDSIVFLKLAKLFSKTALEVCDGQQLDVDFETRSNVTIPEYINMIRLKTSVLVAAALKMG 196
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
AI+A S + + FG NLG+ FQL DD LD D
Sbjct: 197 AIVAETSDENAQLIYDFGLNLGLAFQLQDDYLDTFGD 233
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 11/240 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L + + ++ LD+ L T + ++ ++RY+LL GGK++R +
Sbjct: 55 DFDLKAYFAQKVAAVEKALDESLTCTTPETKI-----IVESMRYSLLAGGKRVRPVMCIA 109
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F A+ AIE IH SLIHDDLP+MDN +RRG PT H+ Y + AI+AG
Sbjct: 110 ACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAG 169
Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---T 175
+ LL+ +FE + T + + + L +G G+ GGQ++D++ E
Sbjct: 170 DALLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLE 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ I KT L+ + +GA++A A++++ + + ++GI FQ+ADD+LD
Sbjct: 230 ELTWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSE 289
>gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
Length = 332
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + L + + ++ ++ A+ M ++H R+ + + GGK++R L A
Sbjct: 14 LNAALTTDLEAVNEVI-------AARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQ 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 67 LCGYDGDNHIKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYL 124
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+F+++ + +I + ++ LQ QD E I +
Sbjct: 125 FARSFQLMVKTGSLRVLDILANAAATIAEGEVLQM------TAAQDLGTTEDTYLKIVRG 178
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL A + G +++ A + + L +G+ LGI FQ+ DDLLD
Sbjct: 179 KTAALFSAATQVGGVISDADETIVKALYDYGDALGIAFQIVDDLLDYGG 227
>gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354]
Length = 308
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 8/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
L L +D D LL + L+ A+R+A + GGK++R L+
Sbjct: 15 ARLKMALATIRTDVDDAFDALLP-----VPGDTRAPLVEAMRHAAIGGGKRVRPLLLVAT 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A++ V+ A+ G A+E IH YSLIHDDLP MD+ +RRGKPTVH +DE TA++AG+
Sbjct: 70 ATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDDDDMRRGKPTVHKAFDEATAVLAGD 129
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
L AF+I++ I+++L+ L G+ GM GGQ +D+ D +
Sbjct: 130 ALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMSGMAGGQAMDMAADSATYDLPTITR 189
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q++KTGAL+ + E GAI+A + + L + ++G+ FQ+ADDLLD E D K
Sbjct: 190 LQQLKTGALLTASVEMGAILARVPHDARGHLIAYARDIGLAFQIADDLLDHEGDEDK 246
>gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 335
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+ K E RI+ L LL + L Y L G GK++R LV A
Sbjct: 12 DIQQKYLEFHTRINEELQQCLL-------GKEPKSLYEPATYILTGKGKRVRPVLVLLGA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AL + ++E +H ++LIHDD+ MDN +R G+ TVH++++E AI++G+
Sbjct: 65 ESICGTSDHALNLALSVEVLHNFTLIHDDI--MDNAALRHGRETVHLKWNENAAILSGDM 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+L +A+E+ + I + I + M + + ++ +
Sbjct: 123 MLAFAYELALKTNSSRLTKIL---DVITQSTIVICEGQTYDMDFEKRTDVTMSEYLDMIS 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ + E G + A A+ + L +GE +G FQ+ DDLLD D K
Sbjct: 180 KKTGRLIAASLELGGLAAEATDEQLAILTEYGELIGQAFQVQDDLLDIMADDKK 233
>gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
Length = 332
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 84/238 (35%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
M L +L +E +R ++D L + L + RY + G GK+IR FL
Sbjct: 1 MTITLTQELVEEKYRRYHKRINDALA---GCFSADKPETLYAPARYIIEGKGKRIRPFLT 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + AL A+E +H ++L+HDD+ + R +
Sbjct: 58 LLASESVCGSSENALNAALAVEILHNFTLMHDDIMDAADLRHGRPAVHKQWNTNVAILSG 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
Y + S + + M + +
Sbjct: 118 DMMIAYAYELALQSKTERHRELIHILNHANITICEGQALDMELELKKNATI-----SDYL 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG L+ A E+G + + +Q + L FGE +G FQ+ DD LD + K
Sbjct: 173 DMIAKKTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLDIMAEDGK 230
>gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
Length = 290
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
++ + + ++L Q + + ++YA L GGK+IR L+ SL
Sbjct: 1 MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL-LTY 126
AA+E IH YSL+HDDLP+MDN RRG+ T H ++ E I+ G+ L
Sbjct: 55 ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
+I ++ +++ + G+ GM+GGQ +D+ + I + I + K
Sbjct: 115 FSVMIRGSMGKVAAEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
TG L+ I+ AS ++E L +G+ +G+ FQ+ DD+LD E +L K
Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 14/232 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
M L S I+T L++ + ++ ++ A+RY++L GGK+ +
Sbjct: 46 MQFDLRSYWTTLISEINTKLEE-------AIPVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+
Sbjct: 99 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L F I S + +++ + ++G GM GQ LD++
Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAP---NS 215
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD+L
Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267
>gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
Length = 320
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+D L + + + L GGK+IR V + + +RV
Sbjct: 17 VDQFLIRHIASSDPTIDAAGQQLLQ-------AGGKRIRPAFVLLASKFGQADRDELVRV 69
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A++E +H SL+HDD+ +D+ +RRGKPTV +DE A+ +GN L A ++I
Sbjct: 70 AASLELVHMASLVHDDV--IDDAELRRGKPTVMQHFDEEVALYSGNFLFGEAVKLIGEVG 127
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ M + Q +I + L+ +C
Sbjct: 128 KPELVQVMVHAMREICEGEIEQIYDQYDWEQSIKRYIKRIERKTAI------LIEASCHL 181
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GAI+A+ S + + LR FG ++G+ FQ+ADDLLD +L K
Sbjct: 182 GAIVANCSPEDTKALRQFGRDIGLAFQIADDLLDFTAKRTELGK 225
>gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
Length = 337
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 13/235 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ +K +E KRI+ L A + L + RY L G GK+IR FL
Sbjct: 13 DQVETKYKEYHKRINDAL-------AGCFTKSTPETLYAPARYILEGKGKRIRPFLTLLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL +E +H ++L+HDD+ MD +R G+PTVH+++DE AI++G+
Sbjct: 66 AESVCNSSDDALNAALGVEILHNFTLMHDDI--MDQADLRHGRPTVHLKWDENAAILSGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
++ +A+E + KT + + NI + M Q +
Sbjct: 124 MMIAFAYECALNTKTDRHAE---LVHILNDANITICEGQALDMELEQRAEATIADYLDMI 180
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A E+G ++ +A + + L FGE +G FQ+ DD LD D K
Sbjct: 181 SKKTGRLISAALEAGGVVGNADALQLQALVTFGEKIGRAFQVQDDYLDIMADDGK 235
>gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
Length = 298
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
N L +K + +++ L + +L+A+ Y++ GGK++R L+ E
Sbjct: 3 NMNFNDMLSARTKEVGLVVETYLPPVEGY-----QSTVLAAMDYSVRAGGKRLRPMLMEE 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF N AA+E IH SLIHDDLP MDN +RRG PT +++ A++AG
Sbjct: 58 TYRLFGGNGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRGLPTAWVKFGYDMAVLAG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
+GLL Y+ E + + ++ M L G+ GM+GGQ +D++ + I + ++
Sbjct: 118 DGLLIYSMETAAKALSMTDRPDLVARCMGILAEKTGIHGMIGGQTVDVELAGKPIPKEKL 177
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ + GA++ A + + + + LG+ FQ+ DD+LD
Sbjct: 178 HFIYRLKTGALLEASMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILDLTSSAE 235
>gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
WCH70]
gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
WCH70]
Length = 320
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L + + ++ L+ + S + +A+ GGK+IR V A
Sbjct: 5 AMYSFLNTDLRAVEKELEKTVQSDYSQLSE-------AALHLLQAGGKRIRPVFVLLAAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V A+E IH SL+HDD+ +D+ +RRG+ T+ +++ A+ G+ +
Sbjct: 58 FGTYDIERIKHVAVALELIHMASLVHDDV--IDDAELRRGRKTIKAKWNNRFAMYTGDYM 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + L I + ++ + Q + ++ K
Sbjct: 116 FARSLEQMARLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRR------IKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L+ +C+ GAI A+A+++ ERL FG +G+ FQ+ DD+LD K
Sbjct: 170 KTALLIAASCQLGAIAANAAKDVAERLYLFGYYVGMSFQITDDILDFTGTEAK 222
>gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 325
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 44/271 (16%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++L+ + ++ ++ L A+ RL A+RY+L GGK++R L+ A
Sbjct: 2 DFAAELRRLTSLVEEGIERHLPPAATR-----PGRLHEAMRYSLQAGGKRLRPVLLLASA 56
Query: 63 SLFNVNHLTAL-----------------------RVGAAIECIHCYSLIHDDLPSMDNGY 99
L + + AIEC+H YSLIHDDLP MD+
Sbjct: 57 ELCGGSGHSPSLQQSATPEPPAGRRGDLVTALALPAAVAIECLHTYSLIHDDLPCMDDDD 116
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+RRG+PT H +DE TA++AG+ LLT+AF +++ + + L G + +
Sbjct: 117 LRRGRPTAHKAFDEATALLAGDALLTHAFALLAENYASQPALAMAL-IRELADAAGSRRL 175
Query: 160 LGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--------HASQNEKE 208
+GGQM D + ++ I KT A++ + G + A E
Sbjct: 176 IGGQMEDLLAEKKADATAEELEFIHLNKTAAMIEASLVMGGWIGLHAQTAAPGALPPEIT 235
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
LR G +LG+ FQ+ DD+LD D L K
Sbjct: 236 ALRAAGRHLGLAFQIIDDVLDATADRATLGK 266
>gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC61]
gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC52]
gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC61]
gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y412MC52]
Length = 320
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L ++ ++ L+ + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLSDDLAAVEEELERTVRSEYGPLGE-------AALHLLQAGGKRIRPVFVLLSAR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L
Sbjct: 58 FGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + + ++ ++ + H Q D +
Sbjct: 116 FARSLERMAELDSPRAHQVLAKTIVEVCHGEIEQI------KDKYRFDQPLRTYLRRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A + RL FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTGTEE 221
>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
Length = 280
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + RL A+ Y+L GGK+IR L E A L V + A+E +
Sbjct: 1 MKSFLNARPDNVPPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMV 60
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKD 140
H SLIHDDLP MDN +RRGKPT H + E A++AG+ LL + F+ +++
Sbjct: 61 HTASLIHDDLPCMDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIET 120
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC---FACESGA 197
+ M +G QGM GGQ LD + + +Q M +G M + G
Sbjct: 121 KRVVRAMELFASALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGL 180
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ERL +G LG+ FQ+ADDLLD
Sbjct: 181 CLGERGDALTERLDEYGRRLGLAFQIADDLLDATATTE 218
>gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114]
gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114]
Length = 301
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 128/244 (52%), Gaps = 18/244 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L +L N ++++ L+ + +Q L A++Y+LL GGK+ R
Sbjct: 4 MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQQP---------LTEAMKYSLLLGGKRARP 54
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+LV A + + A AAIEC+H YSLIHDDLP+MDN +RRG T HI+YDE T
Sbjct: 55 YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 114
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+AG+ L T AFEI+++ + R ++ L+ G GM GQ LD+Q E
Sbjct: 115 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 174
Query: 175 T--QVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ I KTGAL+ A + GA+ A + +L + + +G+ FQ+ DD+LD
Sbjct: 175 DLASLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEIYADAIGLAFQVQDDILDII 234
Query: 232 EDLP 235
D
Sbjct: 235 SDTE 238
>gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens]
Length = 333
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + ++ ++ + + + + L+ A GGK++R L A L
Sbjct: 14 LAEALAPEMEAVNALIRERMASRHAPRIPEVTAHLIEA------GGKRLRPMLTLAAAKL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 LGYGGPYHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ P + I S ++ LQ QD +E + + K
Sbjct: 126 ARSFQLMVEPGSMRTLEILSNAAATIAEGEVLQL------TAAQDLATNEDIYLQVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A + L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFSAATEVGGVIAGVPDAQVRALFDYGDALGIAFQIVDDLLDYGGTAE 230
>gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
49176]
gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
49176]
Length = 307
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 15/246 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN +L+ + + ++ + + + + L A+ Y+LL GGK++R ++
Sbjct: 1 MNNTFTDRLRLKTDEAEKLVAEYAPKL-----GEEDKLLEEAMNYSLLAGGKRLRPLIML 55
Query: 60 ECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E LF AA+E IH YSLIHDDLP+MDN +RRG+PT H Y E AI+
Sbjct: 56 EIFRLFGGKKEGLVRPFAAALEMIHTYSLIHDDLPAMDNDDLRRGRPTNHKVYGEAVAIL 115
Query: 119 AG----NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AG N + + +T + + + L G GM+GGQ+LD+ E +
Sbjct: 116 AGDGLLNLAAETSSKAFRYCETICEYKRVGEALSRLFTYSGADGMIGGQILDMLSEEGKK 175
Query: 175 TQ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + +KTG L+ A GA++A A ++E + + G ++G++FQL DD+LD
Sbjct: 176 EKTEDFFLTMYDLKTGGLIKAAFVIGALLAGAGEDEIDIIEKVGASVGLVFQLQDDILDI 235
Query: 231 EEDLPK 236
D K
Sbjct: 236 SGDETK 241
>gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
30120]
gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
30120]
Length = 305
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 13/243 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+ ++ R++ L L S L A++Y LLGGK++R FL
Sbjct: 7 DTFARQQRQAHDRVNQYL---LTSLDSLPFADLP--LAQAMKYGTLLGGKRLRPFLTYAV 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E A++AG+
Sbjct: 62 GEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLAGD 121
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T+AF+++SS + D R ++ L + GL GM GGQ LD + + +D +
Sbjct: 122 ALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGLAGMCGGQALDLDAEGKRVDLVSLE 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL--- 234
I + KTGAL+ A GA A + L + E++G+ FQ+ DD+LD D
Sbjct: 182 RIHQHKTGALIRAAIRLGAYAAGHKGYQALTNLDKYAESIGLAFQVQDDILDVIGDSAVT 241
Query: 235 PKK 237
K+
Sbjct: 242 GKR 244
>gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
Length = 305
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 85/243 (34%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+ Q+ +R++ L + L + L +A+++ ALLGGK++R FL
Sbjct: 7 NSFTIQQQQAYERVNQYLLNALDAL-----PFSDLPLAAAMKHGALLGGKRLRPFLTYTV 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
S+ V+ + AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 62 GSMLGVDSVNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAILAGD 121
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T AF+++SS + D R ++ L + GL GM GGQ L+ + + +D +
Sbjct: 122 ALQTLAFQLLSSAEMPDVTDKDRIAMLSELAYASGLAGMCGGQALDLEAEGKRVDLAALE 181
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234
I + KTGAL+ A GA A L + E++G+ FQ+ DD+LD D
Sbjct: 182 RIHQHKTGALIRAAIRMGAYAAGIKGHKALPALDKYAESIGLAFQVQDDILDVIGDSEVT 241
Query: 235 PKK 237
K+
Sbjct: 242 GKR 244
>gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027]
Length = 293
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ T ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKTAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 288
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 15/239 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ ++RI+ LD+ L+ S L ++RY++L GGK+ R L A
Sbjct: 2 SFKISFKGYTERINKKLDECLISQGS---------LTKSMRYSVLSGGKRFRPILTYAVA 52
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ F+ + A A+E IH YSLIHDDLP+MD+ R +P H ++ E AI+ G+G
Sbjct: 53 NTFSTDLNRADSSACAVELIHAYSLIHDDLPAMDDDDTRHNQPACHRKFGEAQAILTGDG 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AFE + + +R +L+ +LTH L + + ID + + +
Sbjct: 113 LQALAFETLVNDHNI-SSEMRIKLLQALTHASFEMAEGQSIDLSVVSQVIDIKTLKNMHR 171
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
KTGAL+ + + GA+++ ++ + E L F ++G+ +Q+ DD+LD + L KK
Sbjct: 172 KKTGALLNCSIKLGALLSDQCNKKDFEILDDFSADIGLAYQIQDDVLDVLTPQSILGKK 230
>gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
Length = 317
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E + ID L L + ++ L A ++ GGK+IR +L +L N
Sbjct: 6 KEILEEIDKELKKYLDK---------DNNLYKAAKHLTFAGGKRIRPYLSILTYNLKKDN 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L ++E IH Y+LIHDD+ MDN +RRGKPTVHI Y E AI+AG+ L AF
Sbjct: 57 INEILPAAVSVELIHNYTLIHDDI--MDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAF 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E I + +++ L+ ++ + + + + K KTGAL
Sbjct: 115 EAI---GNIKDEKKAYKVLKVLSKACVDVCEGQAMDMEFESYWPTLEEYLEMIKKKTGAL 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E G IMA ++ E + ++ + E +G+ FQ+ DD+LD D K
Sbjct: 172 LEASAEIGGIMAEFNEEEMKAIKSYAEKIGLTFQIQDDILDIIGDEKK 219
>gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 296
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 17/243 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++LQE + + +++ L + + R+ A+ Y++ GGK++R + E
Sbjct: 2 NFKTELQERTDFAEAVIEKYLPEEHGF-----SGRMAEAVNYSMRAGGKRLRPVFMREAY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AA+E +H +SLIHDDLP++DN RRGK T HI + E AI+AG+
Sbjct: 57 QILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILAGDA 116
Query: 123 LLTYAFEI------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
LL YA+E ++ + +L+ ++ +L+ I G ++ + +++
Sbjct: 117 LLNYAYETAFSAFDMAKDEAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLEKQL 176
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I + KT AL+ A G I+A A+ + E+L G +GI FQ+ DD+LD +
Sbjct: 177 LDYIYENKTSALIEAALMVGGILAGAT--DIEKLEQIGSKIGIAFQIQDDILDVISSAEE 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
C56-T3]
gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
C56-T3]
Length = 320
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L ++ ++ L+ + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLSDDLAAVEEELERTVRSEYGPLGE-------AALHLLQAGGKRIRPVFVLLSAR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L
Sbjct: 58 FGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + + ++ ++ + H Q D +
Sbjct: 116 FARSLERMAELDSPRAHQVLAKTIVEVCHGEIEQI------KDKYRFDQPLRTYLRRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A + +L FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEE 221
>gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
Length = 293
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + ++E R+D L +L +A+ + ALLGGK+IR FLV
Sbjct: 2 LVNAIKEYQLRVDDQLKQRFSTLE-----DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
Length = 340
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S+++ +R++ L D A + +A + GGK+ R LV
Sbjct: 17 DEALESRVRAGLERVEQALRDSTQSEAPFVTQ-------AAQHVMVAGGKRFRPLLVLLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A F V AA+ + MD +RRG T + +D AI+AG+
Sbjct: 70 AE-FGPRPTATEVVDAAVVVELTHVATLHHDDVMDEAALRRGSSTANAAWDNSVAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++++S + I+++ L + + G+ D +
Sbjct: 129 WLFAKASDLVASLGPE-AVRIQARTFGRLVEGQIRETLGVGEGQDPL------AHYLSVV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA A A +E LR FGE +G FQLADD+LD +
Sbjct: 182 ADKTGSLIATSALFGARFAGAPAEVQEALRAFGEEIGTAFQLADDILDVTSESG 235
>gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568]
gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568]
Length = 306
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ +R D L + + ++ +++A+R+ ALLGGK++R FLV
Sbjct: 9 AFSDQLQALRQRADRTLLNFIAPL-----PFNDGNMVAAMRHGALLGGKRLRPFLVYTTG 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E AI+AG+
Sbjct: 64 QMFGVSLNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 123
Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
L T AF I++ + R ++ L G+ GM GGQ LD++ E +
Sbjct: 124 LQTLAFSILADAEMPDVALCDRLAMVSELATASGVAGMCGGQSLDLEAEDRQIGLEALEQ 183
Query: 180 IQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGAL+ A GA+ A + +L + +G+ FQ+ DD+LD + K
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVVGETEK 241
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
L + I+ LD + Q +++ A+RY+ L G K+ +
Sbjct: 52 FDLKTYWTTLIAEINQKLDQ-------AIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVA 104
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF N L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG
Sbjct: 105 ACELFGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAG 164
Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ L + I S + + +++ + +G GM GQ LD++
Sbjct: 165 DALFPLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFV---E 221
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE----DL 234
Q+ K G + + G ++A A +E +RLR +G +G+++Q+ DD+L+ + +
Sbjct: 222 FAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKENE 281
Query: 235 PKK 237
K+
Sbjct: 282 EKR 284
>gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus
kaustophilus HTA426]
gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination
protein C3) [Geobacillus kaustophilus HTA426]
Length = 320
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L ++ ++ L+ + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLNDDLAAVEEELERTVRSEYGPLGE-------AALHLLQAGGKRIRPVFVLLSAR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L
Sbjct: 58 FGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + + ++ ++ + H Q D +
Sbjct: 116 FARSLERMAELDSPRAHQVLAKTIVEVCHGEIEQI------KDKYRFDQPLRTYLRRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A + +L FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTGTEE 221
>gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 320
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S ++E+ +++ + ++ S + L GGK++R
Sbjct: 3 DFFSLIREDLGMVESEIRKVVQSRDSLLTKTSLQLLN-------AGGKRLRPAFALLAGR 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L++ + + + A+E IH +L+HDD+ +D+ RRG PTV + ++ G+ L
Sbjct: 56 LYDADVEKLIPLAVALELIHMATLVHDDV--VDDSMTRRGTPTVKANWGNKISMHTGDYL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +IS+ K L + ++ + + Q F +
Sbjct: 114 FAKSLVLISTYKEPLIAELLAKTSVKMCEGEIHQI------STAYSANQSWRDYFYRIER 167
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L+ +C+ GA+ A A + +RL FG LG+ FQ+ DD+LD D L K
Sbjct: 168 KTALLIAASCQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVADQRELGK 223
>gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
12804]
gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
Length = 308
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
K +D ++ L ++T + + GGK++R +V A
Sbjct: 1 MKAVDAVIRGRLDSEVVLIRTIADYIIG-------AGGKRMRPAMVLMMARALGYQGEHH 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 54 RLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAMFGNAASVLVGDYLYSRSFEMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S+ + LQ + ++ D + + + + + KT L A
Sbjct: 112 EAGSMRIMQILSEATTIIAEGEVLQLL------NVHDPDVSQARYLQVVRYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ GA++A AS ++E +G ++G FQL DD+LD D L K
Sbjct: 166 AQVGAVLAGASPEQEEAAAAYGRHIGTAFQLVDDVLDYSGDAQALGK 212
>gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15]
Length = 322
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + ++ R++ ++ L ++ + S GGK++R LV
Sbjct: 1 MTAQRIYDTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIES-------GGKRLRPLLVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++
Sbjct: 54 LSSQAAGYEENDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AFE++ K+ ++ S + +Q M + Q
Sbjct: 112 GDFLYARAFEMMVELKSLRIMDVLSHATAVIAEGEVMQLMNVKNPDLTE------EQYMK 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A +GA++AHAS ++ L+ +G++LG+ FQL DD+LD + D
Sbjct: 166 VIHNKTAMLFEAASHTGALLAHASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAE 221
>gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA47368]
Length = 291
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118]
gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118]
Length = 327
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 17/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ ++ + +D ++ L + RY + GGK++R L+
Sbjct: 15 IAQDMREVDQVIAHRLDSGV--------PLVGQVARYIIAAGGKRLRPALLLLICGALGF 66
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D+ +RRG PT + + +++ G+ L +
Sbjct: 67 KGAQRFNLAAVVEFIHTSTLLHDDV--VDDSSLRRGNPTANETFGNPASVLVGDFLYSRC 124
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + + + + Q M + +DE + + KT
Sbjct: 125 FQMMVDAQNMRIMQVLADATNVIAEGEVQQLMNM------HNAELDEAGYLQVIRSKTAK 178
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + GAI+A +S +E +G+ LG FQ+ DD+LD +
Sbjct: 179 LFEASARVGAILAGSSPELEEICAEYGQALGTAFQVIDDVLDYTGEAA 226
>gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
Length = 283
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ + S + + D LL++IRY++ GK IR FLV A +F+VN L V AA+E
Sbjct: 24 LIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVEI 83
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP MDN IRRG+ + H +++E AI+ G+ LLT AFEI+S+
Sbjct: 84 IHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFEILSTINESPLIR 143
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
R L+ IG QGM+ GQ+LD + D ++ I +KT CE G I+ +
Sbjct: 144 CRIIKTLAH--AIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSAICELGGILGN 201
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AS + L +G NLG FQ+ DD+ D ++D K
Sbjct: 202 ASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSK 236
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 74/237 (31%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
++ +++ L L + RL A+RY +L GGK++R LV
Sbjct: 14 PSFADWMRGVQAQLEAALARNLPPGEAI-----PGRLHQAMRYASLDGGKRVRPLLVFAA 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + +A+E IH YSL+HDDLP MD+ +RRG+PT H++YDE TA++ G+
Sbjct: 69 GDLTDAARERLELAASAVELIHSYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
L + AFE+++ + + +++ L G GM GGQ +D + +++ ++ +
Sbjct: 129 SLQSLAFELLA-REDFGDGARQLEMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELEL 187
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A GA+ S E+E L F + G++FQ+ DD+LDC
Sbjct: 188 MHALKTGALIRAAVILGALCGTPLSTTEREALDRFAKRAGLLFQVVDDILDCTASTA 244
>gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
Length = 293
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + +R+D L ++ Q+ + +LL+A+++ AL+GGK+IR FLV
Sbjct: 2 LAQATTQYQQRVDNQLTQVIDA-----QSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ NV AAIECIH YSLIHDDLP+MD+ +RRG+PTVH+ +DE TAI+AG+ L
Sbjct: 57 MLNVPQEKLDAAAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
AF+I+S P L ++ +L G GM GGQ +D+ + +
Sbjct: 117 QALAFDILSQPIDGLTPTQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
K+KTGAL+ A E I A ++E+ L F + +G+ FQ+ DD++D E+L K
Sbjct: 177 KLKTGALIRCAVELPMIAADLPKDEQALLMTFADAVGLAFQVQDDVIDIISSTEELGK 234
>gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301]
gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301]
Length = 332
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ S + + ++T++ L + + Y + GGK++R LV
Sbjct: 14 NTIQSCIAADILAVNTVITHSLHSEVTLVN--------QVAHYIVNSGGKRLRPILVLLS 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
LF ++ A +E IH +L+HDD+ +D RRG+ T + + +++ G+
Sbjct: 66 GGLFGEVKPEHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQNTANAIFGNAASVLVGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + AF+++ + + + S + LQ + +I + + + +
Sbjct: 124 FVYSRAFQMMVAVQNMRVMEVLSNATNVIAEGEVLQLL------NIHNADVTDGAYLQVI 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A GAI+++AS +++E L +G ++G FQL DD+LD ++ K
Sbjct: 178 HYKTAKLFEAATRLGAIISNASPSDEEALSQYGMHIGTAFQLIDDVLDLSGNASEIGK 235
>gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
Length = 322
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++ +D I+ L ++ D + SA GGK++R LV S
Sbjct: 6 FYQVVADDFAAVDGIIRKQLTSRVPLVEKIG-DYITSA------GGKRLRPLLVLLSGSA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 59 LGHQGEQLRLLAAIIEFLHTSTLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFLY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+FE++ + I SQ + LQ ++D E + + K
Sbjct: 117 ARSFEMMVELDSMPVMRIISQATRVIAEGEVLQL------SKVRDASTTEEIYMEVIRGK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L + S A +A AS+ ++E LR FG++LGI FQL DDLLD + D
Sbjct: 171 TAMLFEASTHSAATLAGASEQQREALRTFGDHLGIAFQLVDDLLDYQGDAE 221
>gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
Length = 324
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L + + L + Y L LGGK++R LV +F+ ++ AL AIE
Sbjct: 11 FLKYLKEKITIKEPANLYEPMVYILGLGGKRLRPVLVLMATEIFDKDYKKALDASLAIEI 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +I++ +
Sbjct: 71 FHNFSLVHDDI--MDDAPLRRGKATVHEKWDVNTGILSGD------AMLINAYQLFENYE 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
+ L+ + GQ DI E D+ + + KT L+ + + GAI
Sbjct: 123 GDTFKELAQLFTKTAIEVCEGQQYDIDFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+A + K+ + FG LGI FQL DD LD D
Sbjct: 183 VAEVDEECKKAIYQFGRLLGIAFQLQDDFLDAFGD 217
>gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
39073]
gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
39073]
Length = 322
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+ + L + + + L A R+ + GGK++R A
Sbjct: 8 QEVQADLQQVEAELLRQVDAPDP-VLSQAARHLVQAGGKRLRPAFAILAARCCGAPLERI 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L + A+E IH +L+HDD+ +D IRRG+PTV ++ + ++ G+ L + +++
Sbjct: 67 LPLAVALEMIHMATLVHDDV--IDASPIRRGRPTVWARWGQELSLHTGDYLFARSLILVA 124
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ + + + + Q D I KT L+ +
Sbjct: 125 TYDDPRIPSVLASVSVKMVQGEIQQM------AAAFDLDITLRDYLDRIYRKTALLIAAS 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
CE GAI A A LR +G NLG+ FQ+ DD+LD D L K
Sbjct: 179 CELGAIAAGADTATIRHLRYYGRNLGLAFQITDDVLDMVADPEQLGK 225
>gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B]
gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str.
Eklund 17B]
Length = 289
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 9/228 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ ID L + + S+ N + + Y++ +GGK+IR L+ SL+
Sbjct: 2 EIDNLKNVIDEYLKNYFINRNSY-----NKVVYESAGYSVNIGGKRIRPILLILTYSLYK 56
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N + + AAIE IH YSLIHDDLP MD+ +RRGKPT H + E A++AG+ LL
Sbjct: 57 DNIEKIMPMAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNE 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
A ++ + + ++ G +GM+GGQ++D + I + ++ + + K
Sbjct: 117 AMTLL-MKSSLELGESALKASYEISKAAGPEGMIGGQVVDVLSEVSEISKEELEYMHEKK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
TG L+ + +G I+A + E L +G+ LG+ FQ+ DD+LD
Sbjct: 176 TGELIRVSIVAGGILARVPSGDIEALNEYGKKLGLAFQIKDDILDVIG 223
>gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
Length = 332
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 6/234 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+ L++ ++ + + L RY L G GK+IR FL A
Sbjct: 2 NISVTLEQVEQKYRQYHKRINDELGKCFTKDSPRSLYGPARYILDGTGKRIRPFLTLLAA 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A++ A+E +H ++L+HDD+ + R V
Sbjct: 62 EAVCGSSENAIKTALAVEILHNFTLVHDDIMDQADLRHGRPTVHVKWDSTAAILSGDMMI 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
Y + + + M Q D +
Sbjct: 122 AFAYECALQTKTARHDELVHILNDANITICEGQAIDMELEQRQDATI-----ADYLDMIA 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ + E+G I+ A + E+L FG+ +G FQ+ DD LD + K
Sbjct: 177 KKTGRLISASLEAGGIVGDADSEQIEKLMLFGDKIGRAFQVQDDYLDIMAENGK 230
>gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6]
Length = 296
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 113/229 (49%), Gaps = 3/229 (1%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGG-KKIRSFLVTECASLFN 66
E K+ D L + + + A RY+LLGG K+IR+ LV + +
Sbjct: 4 AEYKKQYDEYLARAEKALNQACERYLPEGSDVCRAARYSLLGGGKRIRAVLVLAVCDMLH 63
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A + AA+E +HCYSLIHDDLP MDN +RRGKP+ H + E TA++AG+ LLT
Sbjct: 64 GNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDMRRGKPSCHKAFGESTAMLAGDVLLTE 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AFE ++ T + + L L + E Q+ +I + KTG
Sbjct: 124 AFEAVAGAPTPASVCVHAAQALGAGAGSRGMVYGQELDLKYEALAAAEEQLRLIHRHKTG 183
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ A + G A A + +++ L + +G++FQ+ DD+LD
Sbjct: 184 ALINAAIQMGGAAAQADEVQRKALEAYAYGIGLVFQIVDDVLDVTGTAE 232
>gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus
thermodenitrificans NG80-2]
gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
G11MC16]
gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
G11MC16]
Length = 320
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L ++ ++ L+ + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLSKDLAAVEQELERTVQSEYGPLGE-------AALHLLQAGGKRIRPVFVLLAAR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L
Sbjct: 58 FGHYDLERIKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + ++ ++ + Q D +
Sbjct: 116 FARSLERMAELDDPRAHQVLAKTIVEVCRGEIEQI------KDKYWFEQPLRTYLRRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A ++ +RL FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTGTEE 221
>gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322]
gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8]
gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248]
gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109]
gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411]
gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322]
gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8]
gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411]
gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109]
gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248]
gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000]
gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017]
gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244]
gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302]
gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62]
gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF]
Length = 293
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2;
Short=HEPPP synthase subunit 2
gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus
stearothermophilus]
Length = 320
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L ++ ++ L+ + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLSDDLAAVEEELERAVQSEYGPLGE-------AALHLLQAGGKRIRPVFVLLAAR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V A+E IH SL+HDD+ +D+ +RRG+PT+ ++ A+ G+ L
Sbjct: 58 FGQYDLERMKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + ++ ++ + Q D +
Sbjct: 116 FARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQI------KDKYRFDQPLRTYLRRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A + +RL FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEE 221
>gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
Length = 321
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ I+ +L L RL +A + + GGK+ R +++ +
Sbjct: 3 ASEAAAINALLRQRLR--------GRPSRLYAAAAHLIEHGGKRFRPYMLIKSCQALGGK 54
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ AIE IH ++L+HDD+ MDN IR G PTVH ++ AI+AG+ L + A+
Sbjct: 55 KSDAMPAATAIEMIHNFTLLHDDI--MDNDSIRHGVPTVHKKFGVPVAILAGDVLFSKAY 112
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++IS P+ K R L+ +G L + + ++ M+ KT +L
Sbjct: 113 QVISGPRVPEKRAARLTSRLAAACVDVCEGQLYDMDMAEGAKLPTRSEYIMMIGKKTASL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
AC GAI + A + + R FG LG+ FQ+ DDL+ D KK
Sbjct: 173 FGAACAMGAICSGADEKDARRFAAFGTGLGVAFQITDDLIGITGDPKVTKK 223
>gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
Length = 294
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
+Q R + LQ A L A+RYA L GGK++R LV
Sbjct: 2 SDFAQWMQAQGARTEAA-----LQAALPAAETVPHTLHEAMRYAALSGGKRVRPLLVHAA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+E IH YSL+HDD+P MD+ +RRG+PTVH YDE TA++ G+
Sbjct: 57 GEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AF +++ R QL+ L G GM GGQ +D+Q+ T+
Sbjct: 117 ALQTQAFIVLAGAGAI-APAARLQLVAELALASGSTGMAGGQAIDLQNVGRAMTREALEA 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +MKTGAL+ + GA+ L + +G+ FQ+ DD+LD D
Sbjct: 176 MHRMKTGALLRASVRMGALCGEIDAEGLAALDRYAAAVGLAFQVVDDILDVTADTA 231
>gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
Length = 337
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D IL+ + + RL + I Y+L + GK++R L+ +F+ A+
Sbjct: 19 DQILEAIEHYLGQIGYPEEPGRLYAPISYSLTMSGKRLRPMLLMLTCGIFSDQPQAAMPA 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E H ++L+HDD+ MDN +RRG P+V ++ + AI++G+ +L A+ ++S
Sbjct: 79 AAAVEVFHNFTLLHDDI--MDNAAMRRGNPSVFAKWGQNVAILSGDAMLISAYRLLSEYP 136
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
Q+ I ++ Q M E + + + ++KT AL+ A
Sbjct: 137 PQVLPQILARFNTMAIEVCEGQ---QYDMDFETRESVSVEEYLHMIELKTSALLSGATVI 193
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
GAI+ A + + +RL F LG+ FQL DDLLD D L K
Sbjct: 194 GAIIGGAGEEDCQRLYRFATELGLAFQLQDDLLDSYGDERLGK 236
>gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
Length = 325
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ L+ + R L I Y L LGGK+IR L +LF+ + +A+
Sbjct: 5 DEITQLISSEIEQINWSKEPRGLYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSAMNT 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
IE H ++L+HDD+ MD +RRG+PTVH ++D+ TAI++G+ + I+S +
Sbjct: 65 ALGIEIFHNFTLLHDDI--MDRADVRRGRPTVHKKWDDNTAILSGDVMQ------IASYQ 116
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192
K + + + GQ D+ E D+ + + ++KT L+ A
Sbjct: 117 FVTKTPEKYLKKTLDLFSKTAAEICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLLGAA 176
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
++GA + A + + + L FG N+G+ FQL DDLLD D KK
Sbjct: 177 LQTGAWIGGAGEEDAQLLYDFGINIGLAFQLKDDLLDVYGDEATFGKK 224
>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 295
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+ E +D L+ L+ + + L A+ Y LLGGK+IR +L A
Sbjct: 2 NIKQFTAEVRSAVDNRLNQLIESHIA------SSSLKEAMAYGVLLGGKRIRPYLTMAVA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L AL A+E IH YSLIHDDLP+MD+ +RRG PT HI++ E TA++AG+
Sbjct: 56 ELCGAETNDALDAACAVELIHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLAGDA 115
Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
L T AFE++S+ +T+L R ++ L G +GM GQ LD IDE ++
Sbjct: 116 LQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGAKGMCFGQALDLDATGRAIDELELEK 175
Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ + G + + SQ + F +G+ +Q+ DD+LD +
Sbjct: 176 IHRHKTGALIRASAALGVLAGNDESQQYLDHFCDFASWIGLAYQVYDDILDVVGNTE 232
>gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
Length = 322
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ ++ + +D + D L + + + S GGK++R L T A
Sbjct: 4 NAIRELAADDMQAVDQCIRDRLSSPVVLINQLGHYIIHS-------GGKRLRPLLATLSA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V + + A +E IH +L+HDD+ +D +RRG T + + A++ G+
Sbjct: 57 RACAVEGDEPVVLAAVVEFIHTATLLHDDV--VDASEMRRGNETANHIFGNEAAVLVGDF 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFE++ + I + + +Q M D +DE + + +
Sbjct: 115 LYSRAFEMMVEVGSMRVMEILAHATNVIAEGEVMQLMNC------HDADVDEARYMNVIQ 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KT L AC+ GAI+ + E+E L +G +LG FQL DD+LD D K+
Sbjct: 169 SKTAKLFEAACQLGAILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKR 226
>gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37]
gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37]
Length = 296
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L L + +R+D L+ + + + L A+ Y ALLGGK++R FLV
Sbjct: 1 MT-QLAETLNQYQQRVDKNLNKYIN-----ITHPISPLLNEAMGYGALLGGKRVRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + AA+ECIH YSLIHDDLP+MD+ +RRG+ T H ++DE TAI+A
Sbjct: 55 AVGDMLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQMTCHKKFDEATAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L T AF+IIS P + + +++ L G GM GQ L +++ ++ +
Sbjct: 115 GDALQTLAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQALDLVAENQSVNLVTL 174
Query: 178 FMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I + KTGAL+ A + A+ + ++ + L F + +G+ FQ+ DD+LD D
Sbjct: 175 QKIHQAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQVQDDILDIIGDTQT 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467]
Length = 286
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G I+A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
Length = 338
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----------LGGKKIR 54
L +QE RI+ L ++ T+S + +L + +RY L GK+IR
Sbjct: 3 LNQVVQEMLPRIEEELRQVIEATSS----PNTPQLSAMLRYHLGWEGEGTGQEAQGKRIR 58
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV A AL AA+E +H +SLIHDD+ D +RRG+PTV +++
Sbjct: 59 PLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDIQ--DQSTLRRGRPTVWVKWGIA 116
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI AG+ + T AF ++ + + + L L +
Sbjct: 117 QAINAGDAMFTQAFWALNRLEQTISSQTALEASRILHQVCLRLTEGQYLDLAYEKVDTLP 176
Query: 175 TQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + + KT AL+ E G + +HAS ++ LR FGENLG+ FQ+ DD L D
Sbjct: 177 LEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQVLDDWLGIWGD 236
Query: 234 LP 235
Sbjct: 237 AA 238
>gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1]
gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae
SmR1]
Length = 309
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ++ ++ L + Q + ++SA GGK++R LV A+ F
Sbjct: 1 MEAVNAVIRRQLYSEVPLVN-QVAEYIISA------GGKRLRPVLVVLIANAFGYKGEHH 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A IE IH +L+HDD+ +D +RRGK T + + +++ G+ L + AF+++
Sbjct: 54 HSLAAVIEFIHTATLLHDDV--VDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I + + LQ + + +DE + + KT L A
Sbjct: 112 AVGNPRVMEIVADATNVIAEGEVLQLLNM------HNPDVDENGYLQVIRSKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A A + E +G ++G FQL DD+LD +
Sbjct: 166 SQIGALIAGADEAGIEAAAEYGRSIGTAFQLIDDVLDYSGNSA 208
>gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
Length = 328
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A
Sbjct: 11 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 64 AMGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ + I S + LQ + D + + + +
Sbjct: 122 YSRAFQMMVDAGSMRIMEILSNATNVIAEGEVLQLLNM------HDPDVTVERYLQVIRY 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A A +E +G +G FQL DD+LD
Sbjct: 176 KTAKLFEAAAQLGAVLAGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTASAE 227
>gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023]
Length = 293
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 130/226 (57%), Gaps = 9/226 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD+ L + + + +L ++ Y++ GGK+IR LV N+ + L+
Sbjct: 13 KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH YSLIHDDLP+MD+ RRGK T H Y + TAI+AG+ LLT AF I++ +
Sbjct: 71 TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACE 194
R L+ ++++ G +GM+GGQ ++ +++ + ++ I KTG L+ FA
Sbjct: 131 L-SFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
S A +A A+ + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
Length = 309
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D ++ L ++ Q + ++SA GGK++R L
Sbjct: 1 MQTVDGVIRARLHSDVVLIR-QVAEYIISA------GGKRLRPILTLLSGRALGYRGEHL 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L T AF+++
Sbjct: 54 FELAAMIEFIHTATLLHDDV--VDESDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + ++ + LQ + G + + + + KT L A
Sbjct: 112 TTRNMTILEVMAEATNIIAEGEVLQLLNIGNTDVSE------DEYLKVIQYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
GA++A AS + + +G LG FQ+ DD+LD D
Sbjct: 166 ARVGALIADASAEQVRAMADYGMYLGTAFQIIDDVLDYSGDA 207
>gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922]
gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922]
Length = 323
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 16/234 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++E + ID ++ L + L I Y L +GGK+IR +V +FN
Sbjct: 3 SIEELHQIIDQAIEKNLD-------IKSPRELYEPIEYILGIGGKRIRPLIVLMGNQMFN 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A++ A+E H ++L+HDD+ MD+ +RRGK VHI+Y +AI++G+ +L
Sbjct: 56 GLIEDAVKPAIAMEYFHNFTLMHDDI--MDSAPLRRGKEAVHIKYGINSAILSGDTMLIR 113
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A+E++ + + Q + + I + + K KT
Sbjct: 114 AYELLEDLPNDVFKEAIRLFNKTAIELCEGQ---QYDVNYETQKEISFEDYYKMIKGKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
L+ + GA++A A + E +RL G NLGI +QL DD LD KK
Sbjct: 171 VLVGACLKLGALIAGAPKEEADRLYEIGLNLGIAYQLKDDYLDVFGTSVKIGKK 224
>gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803]
gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803]
Length = 324
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
I + ++ ++ + L + Y L GGK++R LV +F+ N+ AL
Sbjct: 3 AISQYREAIIDYLHEKIKVKEPANLYEPMVYILEQGGKRLRPVLVLMATEIFDCNYKKAL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
AIE H +SL+HDD+ MD+ +RRGK TVH ++D T I++G+ +I++
Sbjct: 63 DAALAIEIFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGD------AMLINA 114
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
+ + LS + GQ DI E D + + KT L+
Sbjct: 115 YQLFESYEGDTFKELSKLFTKTAIEVCEGQQYDIDFETRDNVSIENYLKMIEYKTAVLVG 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + GAI+A S KE + +G LGI FQL DD LD D
Sbjct: 175 ASLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQDDYLDAFGDPE 219
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 17/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
+N L + I+ LD+ + +H + A+RY++L G K+ +
Sbjct: 43 LNFDLRTYWTTLITEINQKLDE-------AIPVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+
Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L AF+ I S +L+ + +G GM GQ +D++ +
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269
>gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
Length = 323
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ +L A + L +GGK+IR L LF+ H A VG A+E H ++L+HDD
Sbjct: 21 PKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFHVGTAVELFHNFTLVHDD 80
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ MD +RR +PTVH Y + AI+AG+ +L +E ++ + K + + +
Sbjct: 81 I--MDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKVQPHYKQKLITAFNKAAI 138
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
Q + D++ E + + +KT L+ + + GAI+ S ++ +
Sbjct: 139 EVCEGQQIDMD-FEDMEPEQVKYDDYVKMIALKTSVLLAASLQMGAIIGGGSDYNQQHIY 197
Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
FG+N+GI FQ+ DD LD D K
Sbjct: 198 EFGKNIGIAFQIQDDYLDAFGDPEK 222
>gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
Length = 334
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 18/236 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ L ++Q ++++ +L D + + + L A + L GGK+ R+ LV
Sbjct: 15 IDETLAREIQAELEQVEKVLRDAVAE--------SDPLLREAASHLLEAGGKRFRAILVL 66
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A +E H +L HDD+ MD +RRG P+ + ++ AI+
Sbjct: 67 LSARFGDATNPDLVSAAAVVELTHVATLYHDDV--MDEAELRRGSPSANRRWGNTIAILT 124
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A EI++ T+ L L + +
Sbjct: 125 GDYVFARASEILADLGTEAVR-------LQAQTFGRLVRGQILETAGPRPGVDPMKHYLD 177
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT +L+ + GA++ +A E L G+ LG+ FQL+DD+LD +
Sbjct: 178 VIADKTASLIASSARFGAMVGNADPEVVETLTRAGDALGMAFQLSDDILDVASETE 233
>gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
Length = 322
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKQQLTSKVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETANAMWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + AS + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCGASAEQAEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
Length = 303
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 130/229 (56%), Gaps = 6/229 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
++ E + + LD LL + RL A+RYA LG GK++R F E +
Sbjct: 16 RVAEIADLVTVALDQLLPRADGP-----EARLTEAMRYAALGPGKRLRPFFAIEAGRMLE 70
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V ALR A+EC+H YSL+HDDLP+MD+ +RRG+PT+HI YDE TAI+AG+ L T
Sbjct: 71 VEERAALRAACALECVHAYSLVHDDLPAMDDDDVRRGRPTLHIAYDEATAILAGDALQTA 130
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF+II T +R +L L+ G +GM GGQM+D+ D V +Q++KTG
Sbjct: 131 AFDIILDEDTHDDAVVRCELARRLSFASGARGMAGGQMIDLMGVRDDLGGVARMQRLKTG 190
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL +A E I+A A++ L F ++G+ +Q+ DD+LD E
Sbjct: 191 ALFAYAFEIPLIIADANEAAWHALTSFAHDIGLAYQIVDDVLDAEGSAE 239
>gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 338
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L S Q + +D+ + + L H + + Y + GGK++R L
Sbjct: 18 EELRSAYQSEIEEVDSFIKEKLSS--------HVELIGEMSSYLIQSGGKRLRPLLTIAS 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ LF +++ A +E IH +L+HDD+ +D RRGK T + + +I+ G+
Sbjct: 70 SELFGYQGDRHIKLAACVELIHNATLLHDDV--IDKSDFRRGKKTNNNLWGNKNSILTGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL FEI+ + + S + + LQ ++ ++ I
Sbjct: 128 YLLGRCFEIMVEDGSLEVLKLLSSVSSEIAQGEILQLQHEKEVETLE------KTYLEII 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT +L + G + S+NEKE L FG NLGI FQ+ DD+LD D
Sbjct: 182 GSKTSSLFAASMRVGGCINDKSKNEKEALTSFGFNLGICFQITDDILDYYSD 233
>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
Length = 296
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTA 72
++ + L + + L A+ Y++ GGK+IR L+ AS +
Sbjct: 13 AVEKEILSFLDEH------TTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPV 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS
Sbjct: 67 YQVAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLIS 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L++ ++ + + + ++ I + KTG L+ +A
Sbjct: 127 MAHLGHSPKLLLLQQLAVCAGAQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G I+A + L+ E+LG+ FQ+ DDLLD
Sbjct: 187 LLAGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226
>gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
Length = 322
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 17/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + + +DT++ + L + + Y + GGK++R LV A +
Sbjct: 10 IAADMQAVDTVIRNRLHSDVA--------LIRRIAEYIVGSGGKRLRPALVLYAAGALDY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A +E IH SL+HDD+ +D +RRGK T + + +A++ G+ L + A
Sbjct: 62 RGVHHHELAAVVEFIHTASLLHDDV--VDESDLRRGKRTANAAFGNASAVLVGDFLYSRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + + + LQ + + + + + KT
Sbjct: 120 FQMMVGVDEMRVMRVLADATNIIAEGEVLQLLNC------HNADVVIEDYLRVIRYKTAK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L A G I+A A ++RL FG +LG FQL DD+LD D
Sbjct: 174 LFEAAARLGGIVAGADDALEQRLAAFGMHLGTAFQLIDDVLDYSADEA 221
>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
Length = 296
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTA 72
++ + L + + L A+ Y++ GGK+IR L+ AS +
Sbjct: 13 AVEKEILSFLDEH------TTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPV 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS
Sbjct: 67 YQVAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLIS 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L++ ++ + + + ++ I + KTG L+ +A
Sbjct: 127 MAHLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G I+A + L+ E+LG+ FQ+ DDLLD
Sbjct: 187 LLAGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
M L S I+T L++ + ++ ++ A+RY++L GGK+ +
Sbjct: 303 MQFDLRSYWTTLISEINTKLEE-------AIPVKYPQQIYEAMRYSVLAKGGKRAPPVMC 355
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+
Sbjct: 356 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 415
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L F I S + +++ + ++G GM GQ LD++
Sbjct: 416 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAP---NS 472
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
V +Q+ K G + + G + A+ ++ RLR +G +G+++Q+ DD
Sbjct: 473 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDD 522
>gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 304
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 132/234 (56%), Gaps = 9/234 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L SKLQ++S I+ +L+ L +S N L++A+R AL GGK++R FL+ +
Sbjct: 10 DLISKLQKSSNYIEIVLEQHLCTLSS-----KNKILVTAMRSALTGGKRLRPFLIYQTGK 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF + + AAIECIH YSLIHDDLP+MDN +RRGKPT HIQ+ E AI+AG+ L
Sbjct: 65 LFGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQFGEKIAILAGDAL 124
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
T AF I+++ + +R +++ L + G GM GQ L+ Q + + V I
Sbjct: 125 HTLAFTILANAQMPAIPIKVRLKMIEILANASGANGMCLGQALELESQFKKMSAKAVETI 184
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KTGAL+ A GAI A S+ L + +G+ FQ+ DDL D ED
Sbjct: 185 YSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQVQDDLWDISED 238
>gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus
shibatae B12]
Length = 331
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L N + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGNTFYKAFSVFINSIEIISEGQAMDMSFENRVDVTEEEYMQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDQKELGK 231
>gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
Length = 294
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 4/231 (1%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L E + + ++ + L A+ Y L LGGK+ R LV
Sbjct: 2 ELNEFALWVKNRVNSFMQARLDAFDADAPA-LKEAMSYGLILGGKRSRPLLVYATGKALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + AA+ECIH YSLIHDD+P MDN +RRG PTVH ++ + TA++AG+ L T
Sbjct: 61 ASDASLDYAAAAVECIHAYSLIHDDMPEMDNDELRRGHPTVHKKFGQATALLAGDALQTL 120
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMK 184
FE S + L +R +L L G GM GGQ +D+ E ++ ++ K
Sbjct: 121 GFEFASDKNSGLSGELRGELCAVLAKGAGFSGMCGGQAMDLDAEGKHIPLERLRVLHSKK 180
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ A GA+ A A + K L + G+ FQ+ DD+LD D
Sbjct: 181 TGALIRVAVAMGAVCADADEKTKAVLDEYAALTGLAFQVWDDVLDVIGDTA 231
>gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase
[Arabidopsis thaliana]
gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related
protein, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 17/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
+N L + I+ LD+ + +H + A+RY++L G K+ +
Sbjct: 43 LNFDLRTYWTTLITEINQKLDE-------AIPVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+
Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L AF+ I S +L+ + +G GM GQ +D++ +
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269
>gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
35937]
Length = 332
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L GA+ + A + ++RL +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGADADVQQRLYDYGMQLGFAFQIADDVLDYAAEAEDLGK 235
>gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
Length = 293
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + ++E R+D L +L +A+ + ALLGGK+IR FLV
Sbjct: 2 LVNAIKEYQLRVDDQLKQRFSTLE-----DTAAQLKAAMTHGALLGGKRIRPFLVYSVGQ 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V+ AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MFGVSLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
T AFEI++ + ++ +L G +GM GGQ +D D+ ID + +
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
MKTGAL+ A E I A+A ++E + + F +G+ FQ+ DD+LD E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234
>gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
Length = 287
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 90/233 (38%), Positives = 130/233 (55%), Gaps = 15/233 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++L ++ I T L +L + + +RYA GGK+IR FLV E A L
Sbjct: 1 MQARLAAEAETIQTHLSRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLVMESARL 53
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+V A+ AIE +H YSL+HDDLP+MDN +RRG+PTVHI++DE TAI+ G+ L
Sbjct: 54 HDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHIKWDEATAILVGDALQ 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
+ AFE+++ +R+ L LSL G QGM+ GQ LDI E ++ +
Sbjct: 114 SLAFELVA-HPDCGPAEVRAGLTLSLARAAGGQGMVLGQALDIAAETATSPLSLDEITTL 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
Q KTGAL+ ++ +GA MAHA L + LG+ FQ+ DD++D D
Sbjct: 173 QAGKTGALILWSATAGACMAHAD---MTPLSTYARALGLAFQIQDDVIDVTGD 222
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 17/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
+N L + I+ LD+ + +H + A+RY++L G K+ +
Sbjct: 43 LNFDLRTYWTTLITEINQKLDE-------AIPVKHPAGIYEAMRYSVLPQGPKRAPPVMC 95
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y AI+
Sbjct: 96 VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155
Query: 119 AGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L AF+ I S +L+ + +G GM GQ +D++ +
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q+ K GA+ + G ++ A+++E + LR +G +G+++Q+ DD+ ED K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269
>gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
Length = 305
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 111/242 (45%), Positives = 152/242 (62%), Gaps = 7/242 (2%)
Query: 1 MNGG----LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
M L + ++ +L LL + RL++A+R+ +L GGK++R
Sbjct: 1 MTNDDEMAFEMALIRRAAAVEVLLRRLLDDRPLTGEIARPGRLMAAMRHGVLNGGKRLRP 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
FLV E A+LF+ + ALRV AA+EC+HCYSLIHDDLP+MD+ +RRG+PTVH +DE T
Sbjct: 61 FLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDMRRGQPTVHRAFDEAT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ LLT AF+II+ T L R+ L+L+L G GM+GGQ LD++ E
Sbjct: 121 AILAGDALLTLAFDIIAGEATVLPAERRAALVLALARAAGAGGMVGGQTLDLEAERTPPD 180
Query: 176 QVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +I Q MKTGAL+ FACE+GAI+A A ++ERL FG +G+ FQLADDLLD D
Sbjct: 181 EAGIIRLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAVGLAFQLADDLLDLTAD 240
Query: 234 LP 235
Sbjct: 241 AS 242
>gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273]
gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Chlorobium luteolum DSM 273]
Length = 330
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 82/232 (35%), Gaps = 13/232 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
K + KRI+ L T L + RY L G GK+IR FL +
Sbjct: 9 EQKYRAYHKRINDALGACFSAT-------TPATLYAPARYILEGKGKRIRPFLTLLASEA 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ N AL+V A+E +H ++L+HDD+ R +
Sbjct: 62 VSGNSENALKVALAVEVLHNFTLMHDDIMDEAELRHNRPTVHREWNANVAILSGDMMIAY 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
Y + + + M + D + K
Sbjct: 122 AYELALEAESHRHCELIHILNHANITICEGQALDMELEEKQDATI-----ADYLDMISKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
TG L+ A E+G + A A++ + + L FGE +G FQ+ DD LD + K
Sbjct: 177 TGRLISAALEAGGVSADATREQLQSLVLFGEKIGRAFQIQDDYLDIMAEDGK 228
>gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus
Faecalis V583
gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus
Faecalis V583
Length = 302
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 126/239 (52%), Gaps = 11/239 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC- 61
L + Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV
Sbjct: 9 SLTNFSQQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTV 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ +V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+
Sbjct: 63 AAFQKEMETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
GLLT AF+++S + L + + L+ ++ + + ++ +
Sbjct: 123 GLLTGAFQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVH 182
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
+ KTGAL+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 183 EKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 241
>gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
12809]
gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
12809]
Length = 324
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 16/237 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ + ++ L D L M + + + + GGK++R +
Sbjct: 1 MNINDVMKLVENEREAVEKNLIDNLDSDV-EMVNKVAEYIFES------GGKRLRPVFMI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + + +E IH +L+HDD+ +D RRGK + + + ++
Sbjct: 54 LSALMCGYDGERTINLAGVVEYIHTATLLHDDV--IDGAKYRRGKESANNVFGNDITVLC 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AF + + + +++ Q + +
Sbjct: 112 GDFLYSRAFMNLVKDGDSRAQMLLAVAARTMSEGEVFQLIKTADVKITM------DDYLR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT + CE GAI+ +++ L FG+ LGI FQ+ADD+LD D K
Sbjct: 166 IINSKTAVMFATCCEIGAILGEMPVEKQKALADFGKTLGIAFQMADDILDYLGDPEK 222
>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
Length = 296
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT-ECASLFNVNHLTA 72
++ + L + + L A+ Y++ GGK+IR L+ AS +
Sbjct: 13 AVEKEILSFLDEH------TTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPV 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF++IS
Sbjct: 67 YQVAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLIS 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L++ ++ + + + ++ I + KTG L+ +A
Sbjct: 127 MAHLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G I+A + L+ E+LG+ FQ+ DDLLD
Sbjct: 187 LLAGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226
>gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
Length = 327
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
L+++ K ++ D+LL S +Q + Y GGK++R + + L
Sbjct: 11 ELLKDDIKSVE---DELLKNLDSEVQ-----MVNEVASYVFKSGGKRLRPVFLILSSKLS 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
++ + +E IH +L+HDD+ +D RRGK + + ++ G+ L +
Sbjct: 63 GYEGNRSIVISGVVEYIHTATLLHDDV--IDGAMYRRGKKAANRVFGNDITVLCGDFLYS 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF + I + +++ Q + I KT
Sbjct: 121 RAFVNLVKDGDPEVQMILANAAKTMSEGEVFQLVKTANFDLTM------EDYLKIIFSKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
L CE GA+++ + ++++E LR +G +G+ FQ++DD+LD D KK
Sbjct: 175 AILFSSCCEIGAVLSKSDKDKRENLREYGRLIGLAFQMSDDILDYLGDENKTGKK 229
>gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 322
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 21/242 (8%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
MN + + + ++ L ++ A+ + T + S GGK++R +
Sbjct: 1 MNFQDIFKTY-EAELREVEKELINIFKSDATLIPTIGAYIINS-------GGKRLRPLFL 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + + A IE +H SL+HDD+ +D +RRG+ + + + ++
Sbjct: 53 LISADLAGYREYKRVIMAAVIEALHTASLLHDDV--VDEAELRRGQVSANRIWGNQVTVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A + + ++ S + LQ M G +
Sbjct: 111 LGDYLYAKALHVSVAQESLQIMEALSWATSQMAEGEILQLMKAGDPTITF------NEYI 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I KT L+ AC I+A S+ + + L FG N+G+ FQ+ DD+LD D L
Sbjct: 165 KIITGKTAGLIRAACRIAGILAKLSEEKIQALTDFGHNIGVAFQMIDDILDYVADESELG 224
Query: 236 KK 237
KK
Sbjct: 225 KK 226
>gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 291
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDRWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAMAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
Length = 263
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 9/212 (4%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE
Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLT-----LAFEVLSSLNE 124
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
R +++ L+ IG++GM+GGQ LDI +F + I MKT L +CE GAI+
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDIDTDFNKIKE---IHLMKTAKLFAASCEIGAIIGG 181
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A+ ++ L FG NLG+IFQ DD+ D E+D
Sbjct: 182 ATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 213
>gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1]
gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1]
Length = 320
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ S L+ + I+ L + + L A + L GGK+IR V A
Sbjct: 6 IYSFLKADIDLIEKELKTAIDSRS--------PLLNEASLHLLSAGGKRIRPVFVLLSAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N + V A+E IH SL+HDD+ +D+ +RRGKPT+ Q+D TA+ G+ +
Sbjct: 58 FGDYNINSIKNVAVALELIHSASLVHDDV--IDDADLRRGKPTIKSQWDNKTAMYTGDYI 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E ++ + I S ++ LT Q D D K
Sbjct: 116 FARSLEYMTKIDNEDAHKILSNAIVELTVGEIEQI------KDKYRFEQDLKDYLRRIKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GAI A A ++L FG N+G+ FQ+ DD+LD
Sbjct: 170 KTALLIAVSCQLGAIAAGAPPEIHKKLYRFGYNVGMSFQITDDILDFTASEE 221
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/242 (30%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
Query: 1 MNGGL--PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M+ + L+ + D L+ LL + AIR++ GGK++R L
Sbjct: 1 MSATIDVTEILRAGVEATDAALERLLPA-----PDAVPSSIHRAIRHSTFAGGKRLRPVL 55
Query: 58 VTECASLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
E A + +GAAIE +H YSLIHDDLP++DN +RRGKPT H+ + E
Sbjct: 56 AMEAARTLRRDRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEA 115
Query: 115 TAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+AG+ L T A++ ++ +L+ T + L+ +
Sbjct: 116 IAILAGDALQTLAYQTLAQLRCPAPATVEIIRLIAEATGTVEGMIGGQVLDLEGEGTRPT 175
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
V I + KTGAL+ + +G + A A+ + ERL FG G+ FQ+ DD+LD +D
Sbjct: 176 AESVDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQD 235
Query: 234 LP 235
Sbjct: 236 SA 237
>gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
Length = 295
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/236 (31%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + + RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDGALDALFVAPREEL-----HRLYQAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALQGEAQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADGRRNPQEPTVCLEMLTHLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ + GA+ + A L + + +G+ FQ+ DD+LD E D
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEAATLAALERYAQAIGLAFQVQDDILDVESDTA 232
>gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
Length = 331
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L + + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGK 231
>gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
Length = 323
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ ++++ L + + S GGK++R +V
Sbjct: 1 MNLDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHS-------GGKRLRPMVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +++ A IE IH +L+HDD+ +D +RRGK T H + +++
Sbjct: 54 LAARACGYQGKDHVQLAAIIEFIHTATLLHDDV--VDGSDMRRGKQTAHTIWGNEASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AFE++ + I ++ ++ +Q M ++ + + E
Sbjct: 112 GDFLYTRAFEMMVELDSMAVLRILARATNTIARGEVMQLM------NVHEPDLTEADYRQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L C++GA++A E L +G +LG +QL DD LD D
Sbjct: 166 VIYRKTATLFEAGCQNGAVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGDAS 221
>gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
Length = 343
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L +++++ + +D I+ +L+ + L A R Y L GGK++R F+V
Sbjct: 5 NELFTRIRKLAGDVDKIILELVPEKE-------PKTLYDAARHYPLAGGKRVRPFVVLRA 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ AL AA+E IH YSL+HDD+ MD +RRG+PTVH + AI+AG+
Sbjct: 58 TEAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE ++ K R +L T N +G + +DE + +
Sbjct: 116 LLFSKAFEAVAKAKVDPDKKARILEVLVKTSNELCEGQALDIEFETRDEVTV-DEYLKMI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL + GAI+ ++ + L +G N+GI FQ+ DD+LD D K
Sbjct: 175 SGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEKK 229
>gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583]
gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22]
gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583]
gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22]
gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341]
Length = 293
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A]
Length = 331
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MTDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L + + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGK 231
>gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 291
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + + RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDRWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
Length = 295
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
+R++ + D+ L Q A + A RY+LLGG K+IR+ L L A
Sbjct: 19 ERLEKLCDEYLPQKA---------EIGQAARYSLLGGGKRIRAVLALSACELAGKPAELA 69
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L A+E +HCYSLIHDD+P MDN RRG+P+ H QY E TA++A + L+T AFE+I+
Sbjct: 70 LDYACALEMLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADALVTAAFEVIA 129
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + R+ +L+ + + E Q+ + KTGAL+ A
Sbjct: 130 QAELSPESRCRAAAVLAKAGGARGMLYGQELDKKYEAQSATEQQLLELHAHKTGALILAA 189
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
E G I A A+ ++ L+ + LG++FQ+ DD+LD +L K
Sbjct: 190 VELGCIAADAAPATRQALQRYAAELGLVFQIVDDILDVTSTTEELGK 236
>gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104]
gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98]
gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712]
gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613]
gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134]
gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860]
gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470]
gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635]
gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102]
gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104]
gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98]
gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712]
gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613]
gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76]
gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860]
gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134]
gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102]
gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635]
gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470]
gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031]
gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043]
gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312]
gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342]
gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630]
Length = 293
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 304
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/246 (33%), Positives = 117/246 (47%), Gaps = 17/246 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ +S+R ++ LD LL + RL A+RYA GG K+IR LV
Sbjct: 5 FQFQDWVIAHSQRAESALDRLLDSEKT-----IPHRLHEAMRYAAQGGGKRIRPLLVYAA 59
Query: 62 ASLFN--------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
L N + AIECIH YSL+HDDLP MD+ +RRG+PTVH +DE
Sbjct: 60 GQLGNSINEQADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDE 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
TA++ G+ L T AFEI+++ K + L+ L+ + +D
Sbjct: 120 ATALLVGDALQTRAFEILANAKCDANIRLAMISALAAASGSRGMAGGQAIDLESVGKKLD 179
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + MKTGAL+ A G I A S + +L + E LG+ FQ+ DD+LD D
Sbjct: 180 LDGLKQMHAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDATAD 239
Query: 234 ---LPK 236
L K
Sbjct: 240 SQTLGK 245
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 11/237 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ L I+ L LL T L A+ Y+LL GGK+IR L
Sbjct: 5 EAYLAAKKTVIEARLQQLLPVTEPAFAP-----LYKAMNYSLLAGGKRIRPILFLAALEA 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+EC+H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLL
Sbjct: 60 LGKESSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLL 119
Query: 125 TYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
T+AFE+++ + + I +++ G+ G +L I + ++ +
Sbjct: 120 TFAFELLARQRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHR 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KTG + I+A A ++ L+ + E LG+ FQ+ DD+LD E +L K
Sbjct: 180 GKTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGK 236
>gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
Length = 293
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 91/238 (38%), Positives = 130/238 (54%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L L+ R + L+ + + +L +A+++ AL+GGK+IR FLV
Sbjct: 2 LVESLKRYQLRSNQQLELRIDALE-----DIDPQLKAAMKHGALIGGKRIRPFLVYAIGD 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V T AAIECIH YSLIHDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57 MLGVKLTTLDSCAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--Q 181
AFEIIS P + + ++ +L + G GM GGQ +D+ +I
Sbjct: 117 QALAFEIISDPIENITPSQNLAMVKALANASGYSGMCGGQAMDLSATNKQIELATLIKLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
K+KTGAL+ A E I A E++ L F + +G+ FQ+ DD+LD E+L K
Sbjct: 177 KLKTGALIRCAVEFAIIAAKVDGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGK 234
>gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 303
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/248 (32%), Positives = 125/248 (50%), Gaps = 18/248 (7%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M+ +++ +D L DL + DRL+ A+RY LL GK+ R +
Sbjct: 7 MDDHAAFLQRVEALRAGVDRRLADL-----APAVGSAPDRLVEAVRYCLLAPGKRFRPMV 61
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A+ +AL A E IH SLI DDLP+MD+ +RRG PT+H +DE TAI
Sbjct: 62 TLLAAAECGAPEGSALDAACAFEMIHAASLILDDLPAMDDAGLRRGLPTIHRAFDEATAI 121
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
+AG GLL A+ +I++ + L ++R++L H +G G++ GQ D+ D
Sbjct: 122 LAGVGLLNQAYAVIAADQ-GLPGSLRAELTARAAHAVGFSGLIAGQARDLFDRDQIRDPA 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
+ + KTG L+ A + GA++A A + E F ++G+ FQ+ DDL+D +
Sbjct: 181 ALERLNHEKTGVLIIAAAQGGALVAGAPEATVEAFGTFARHIGLAFQIRDDLIDAQGSAE 240
Query: 233 ----DLPK 236
D+ K
Sbjct: 241 TAGKDVGK 248
>gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
19865]
gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
19865]
Length = 358
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 40 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 92
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 93 HAAGGSGPEHHQLAAIVEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 150
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 151 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 204
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L GA+ + A + ++RL +G LG FQ+ADD+LD DL K
Sbjct: 205 RKTAVLFAAGTRLGALASGADAHVQQRLYDYGMQLGFAFQIADDVLDYAADATDLGK 261
>gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012]
Length = 293
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
Length = 331
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L + + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGK 231
>gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004]
gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus bovienii SS-2004]
Length = 305
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/244 (33%), Positives = 130/244 (53%), Gaps = 7/244 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ + +E+ ++D L+ T S + + + + A+LGGK++R FLV
Sbjct: 1 MSEQYKAPFEEHLSACQQHVNDKLMATFSSLPFLDSPLATAMLHGAVLGGKRLRPFLVYS 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F ++ + A+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG
Sbjct: 61 VGEMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILAG 120
Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L + AFEI++ + + R ++ L GL GM GGQ L+ + + ID +
Sbjct: 121 DALQSLAFEILAKQDMPNIALSDRLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLATL 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDL-- 234
I + KTGAL+C A GA A + L + + +G+ FQ+ DD+LD +
Sbjct: 181 EQIHRHKTGALICTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQVHDDILDVIGNTDV 240
Query: 235 -PKK 237
K+
Sbjct: 241 IGKR 244
>gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262]
gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262]
Length = 293
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 130/226 (57%), Gaps = 9/226 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD+ L + + + +L ++ Y++ GGK+IR LV N+ + L+
Sbjct: 13 KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH YSLIHDDLP+MD+ RRGK T H Y + TAI+AG+ LLT AF I++ +
Sbjct: 71 TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACE 194
R L+ ++++ G +GM+GGQ ++ +++ + ++ I KTG L+ FA
Sbjct: 131 L-SFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
S A +A A+ + +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 235
>gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 332
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + AS +++L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235
>gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73]
gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas
albilineans]
Length = 331
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +D ++ L + Q D ++SA GGK++R LV +
Sbjct: 22 DMAAVDALIRHRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAGRACGSHGPK 74
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++
Sbjct: 75 HHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLM 132
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + LQ + + + DE + + KT L
Sbjct: 133 VELDSMAVMRLLADTTNRIAEGEVLQLLH------VHNPDTDEAAYLQVIERKTAVLFAA 186
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA+ A A+ ++ L +G +LG FQ+ADD+LD D
Sbjct: 187 GTRLGALAAGATDAVQQCLYAYGMHLGYAFQIADDVLDYTADAA 230
>gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
Length = 293
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFITEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
Length = 297
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 15/244 (6%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
MN L E ++ LL S D L ++ Y+L GGK+IR L
Sbjct: 1 MNSKPEFQQFLTEQINILEARFPLLLNPLKS------PDILKESMLYSLNAGGKRIRPVL 54
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ R AA+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI
Sbjct: 55 LLSVLHAAGKPLEAGYRTAAALELIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEDIAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
+AG+GLLT++F +IS L +++ L+ +T G +GM+GGQ + + + +
Sbjct: 115 LAGDGLLTHSFNLIS-KDEHLSADLKVALIADITDAAGPEGMVGGQVSDMQGEGKELTAE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
++ I KTG L+ + +G +A ++ + + L G++LG+ FQ+ DDLLD E
Sbjct: 174 ELEAIHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLLGKHLGLAFQIKDDLLDIEGTVE 233
Query: 233 DLPK 236
++ K
Sbjct: 234 EIGK 237
>gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1]
gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1]
Length = 264
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 8/203 (3%)
Query: 43 IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ Y ALLGGK++R FLV + + N + AA+ECIH YSLIHDDLP+MDN +R
Sbjct: 1 MHYGALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGML 160
RG+PT HI+Y E TAI+AG+ L T AF I++ + R ++ L G+ GM
Sbjct: 61 RGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMC 120
Query: 161 GGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217
GGQ L + + ID Q+ I + KTGAL+ A GA+ A A + L + E +
Sbjct: 121 GGQALDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAI 180
Query: 218 GIIFQLADDLLDCEEDL---PKK 237
G+ FQ+ DD+LD D K+
Sbjct: 181 GLAFQVQDDILDVIGDTAVIGKR 203
>gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
Length = 320
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+QE + LD + +++ + + + +Y + GGK++R LV ++
Sbjct: 1 MQEVRAVVSKELDAVNAVIIEQLRSDV-EMVENVGQYIVDAGGKRLRPVLVLLSSAALGS 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+R A +E IH +L+HDD+ +D +RRG+PT + + ++++ G+ L T A
Sbjct: 60 ISELQIRFAAVVEFIHTATLLHDDV--VDVSELRRGRPTANSAFGNASSVLVGDFLYTRA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + + + ++ LQ + G + Q + + KT A
Sbjct: 118 FQLMVTLGNHDVLKMMADTTNTIAAGEVLQLIRAGDSSTSE------DQYYDVIDRKTAA 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L C+ A++A A L +G N+GI FQ+ DDLLD + D
Sbjct: 172 LFAAGCQGAALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGDPE 219
>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 300
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 10/229 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
+R + +L + L Q + L+ A++Y LLGGK+ R FL + V
Sbjct: 14 YQQRSNDVLANWLA-----TQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L T AFEI
Sbjct: 69 DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEI 128
Query: 131 ISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGA 187
+++ + + R ++ L G GM GQ LD++ E Q+ +I + KTGA
Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGA 188
Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A GA+ A +L + E +G+ FQ+ DD+LD D
Sbjct: 189 LIRCAVRLGALAAGEKGIAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237
>gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
C19]
Length = 339
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ ++++++ + + + + + GGK++R L A L V +
Sbjct: 26 AADMVKVNSLITARMQSEVAVIPALADHLIA-------AGGKRLRPLLCVAAARLCEVRN 78
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D+ +RRGK H+ + ++++ G+ L AFE
Sbjct: 79 DNHHKLSAAVEFIHTATLLHDDV--VDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFE 136
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + +I S+ +T LQ M + Q I KT AL
Sbjct: 137 LMVETGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQ------ADYIEIISSKTAALF 190
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A ESGA+ A AS+++ L +G NLG+ FQ+ DD+LD + DL K
Sbjct: 191 SAASESGAVAAGASEDKITALYSYGLNLGLAFQIQDDVLDYQGDAADLGK 240
>gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1]
gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanoculleus marisnigri JR1]
Length = 321
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 10/235 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L L+ N++RID +L H D ++ L GGK++R +V
Sbjct: 1 MT-TLEDYLEMNAERIDKVLHRYF-------GDVHGDLFRASAHLLLAGGKRLRPAVVIL 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + + MD RRG PTVH +DE TAI+AG
Sbjct: 53 AADAVRKGSSDDLIPAALSLELTHNFTLI-HDDIMDGDAARRGVPTVHTIWDEPTAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L AFE I + IR+ ML+ T +G + + + + + +
Sbjct: 112 DVLYAKAFEFICFSEAADAAKIRAVKMLARTCTDICEGQSMDMAFEKRHDVSE-VEYLEM 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L + G I+A AS + + L +G N GI FQ+ DDL+D
Sbjct: 171 VSKKTGVLYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDLLASSE 225
>gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9515]
gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9515]
Length = 323
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+L+ + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 RDFNLTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVKVVKLLSRVIMDLAEGEIKQNLNRFDSGQTF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ ++++ ++ L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSTKAAGVLSNLEDDKLNCLYEFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346]
Length = 293
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
17393]
gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
17393]
Length = 324
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+ + T+ L + + Y L +GGK+IR L+ +L+ +
Sbjct: 6 ELLEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPA 65
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE H Y+L+HDDL MD RRGK TVH +++ TAI++G+ +L A++ ++
Sbjct: 66 IGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAECSP 123
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ L+ Q M M Q + + + ++KT L+ + G
Sbjct: 124 SFLKEVMDLFSLTALEICEGQQM---DMEFEQRNDVAAEEYLEMIRLKTAVLLAASLRIG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + AS + +RL FG +G+ FQL DDLLD
Sbjct: 181 ARLGGASVEDADRLYDFGMQIGVAFQLKDDLLDVYG 216
>gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
Length = 307
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 11/233 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L + R++ LD L ++ RL A+RYA L GGK+IR LV A
Sbjct: 16 ALDQLTETAKARLEQALDHYLPAQSA------ASRLSQAMRYAALSGGKRIRPLLVYGAA 69
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A A+E IH YSL+HDDLP+MD+ +RRG+ T H +DE TAI+AG+
Sbjct: 70 QLAGASAAQADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQATCHKAFDEATAILAGDT 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
L T AFE+++ D+ + + G+ GM GQM D+ Q + + +
Sbjct: 130 LHTRAFELLACHGDYRSDSRIALIQHL-CQAAGVDGMAAGQMQDMLAQGQQQTVAALEEM 188
Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KTG L+ + + G A + L FG+ +G+ FQ+ DD+LD
Sbjct: 189 HYLKTGRLITASLQLGYFAAENDDPALLSNLTDFGDAIGLAFQIQDDILDITA 241
>gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
Length = 289
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+++ K I+ + + QT + L+ A+ Y++ GGK+IR L+ E F +
Sbjct: 1 MKDKIKSINQAIKHY------YAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGL 54
Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+V A++E IH SL+HDDLP+MDN RRG+ T H ++ E TAI+AG+ L
Sbjct: 55 VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLD 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F +++ + I+ LS + + ++ Q+ I KTG
Sbjct: 115 PFGLLAKADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTG 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ F + I+A S+ RLR GE +G+ FQ+ DD+LD +L K
Sbjct: 175 KLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227
>gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855]
gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855]
gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137]
Length = 293
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQKLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 320
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 17/234 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + +D ++ + L + Y + GGK++R LV
Sbjct: 2 ENFNQLLAADMASVDQVIRNKLHSEVVLVN--------QVAEYIVNSGGKRLRPALVVLS 53
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A FN + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 54 AHAFNYTGEHHHELAAVVEFIHTATLLHDDV--VDESGLRRGRETANALFGNAASVLVGD 111
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AF+++ + + + LQ + + ++ +
Sbjct: 112 FLYSRAFQMMVEVGSMRVMQTLADATNVIAEGEVLQLLNCNDADVDAENYMR------VI 165
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GAI+A S ++ +G +LG FQL DD+LD D
Sbjct: 166 HYKTAKLFEAAMRLGAILAKTSSEDEAAAATYGMHLGTAFQLIDDVLDYSADEA 219
>gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 332
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + AS +++L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235
>gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B]
gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A]
Length = 293
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 332
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + A+ +++L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGATVEVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235
>gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 408
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 90 PQIQSLAAPDMAAVDAVIRRRLASDVMLIN-QIADHIISA------GGKRLRPMLVILAG 142
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 143 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 200
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 201 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 254
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + A +++L +G LG FQ+ADD+LD +L K
Sbjct: 255 RKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGK 311
>gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 293
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L K +LD+ L + + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLAHYKK----VLDESLYKEIKKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + + L+ A+E IH YSLIHDDLP+MD+ RRGK T H + + TAI+AG+
Sbjct: 57 QALNKDPMIGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMI 180
LLT AF I++ + R L+ ++++ G +GM+GGQ ++ +++ + ++ I
Sbjct: 117 LLTLAFSIVAEDENL-SFETRIALINQISYSSGAEGMVGGQQADIEAENKQVTLEELSSI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTG L+ FA S A +A A+ + +RLR F EN+G+ FQ++DD+LD D KK
Sbjct: 176 HARKTGELLIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDDILDVIGDETKMGKK 235
>gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
Length = 322
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S + E+ +++D ++ L + + + S GGK++R LV A
Sbjct: 6 IQSCIAEDMQKVDAVIRKALHSDVVLINQVADYIINS-------GGKRLRPTLVLLSAGA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ +
Sbjct: 59 FGRIEAKHHELAAIIELIHTSTLLHDDV--VDESSLRRGKATANTLFGNAASVLVGDFIY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ F+++ ++ + S ++ LQ + ++ D I + + K
Sbjct: 117 SRTFQMMVGIQSMRVMEVLSDATNTIAEGEVLQLL------NVHDADITDEAYLRVIHYK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A GAI+ ++ + +G LG FQL DD+LD D
Sbjct: 171 TAKLFEAATRLGAIICGTDAQDEAAMAEYGMRLGTAFQLVDDVLDLSGDSS 221
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ D L L + L ++ Y++ GGK++R L+
Sbjct: 2 ADFKQLAARELPQFDAYLKRELAKIQE-------PTLQKSMTYSVMAGGKRLRPLLLFAV 54
Query: 62 ASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ TA R A+E IH YSLIHDDLP+MDN +RRG+PT H + E AI+AG
Sbjct: 55 LESTGQSIDETAFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLLT AFE +++ + I +L+ + ++ + + + Q+ +
Sbjct: 115 DGLLTLAFEWLATLNVTAEQRIELVRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQV 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTG L+ A GA++A + E LR F + G+ FQ+ DD+LD ++ K
Sbjct: 175 HHLKTGCLIEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTSTTAEMGK 233
>gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
Length = 356
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 22/241 (9%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L + + ++ D + + + A GGK++R L A
Sbjct: 33 ALADYLASDMLACNQVIVDRMQSPVALIPQL-------AAHLVAAGGKRLRPLLTLAAAR 85
Query: 64 LFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N+ + + + A +E IH +L+HDD+ +D+ +RRG + + + +++
Sbjct: 86 MCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDDSQLRRGLASANAIFGNKASVLV 143
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L +F+I+++ + I S +L +Q D Q
Sbjct: 144 GDFLFARSFQILTADASLGVMAILSAASATLAEGEVMQM------TTQNDLSTSVDQYLQ 197
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT AL ACESGA++ A+ ++E LR +G NLG+ FQL DD LD D L K
Sbjct: 198 VIYGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGK 257
Query: 237 K 237
+
Sbjct: 258 E 258
>gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
Length = 331
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L + + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGK 231
>gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
Length = 359
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ + +D ++ L T + Q + +++A GGK++R L+ +
Sbjct: 45 ALITDDMREVDHVIAQRLTTTVPLI-AQISQYIIAA------GGKRLRPALLLMVCNALG 97
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L +
Sbjct: 98 YEGRDRHVLAAVVELIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHSR 155
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + I S + Q + + D +DE + + KT
Sbjct: 156 SFQMMVEVGSMRVLKILSDATNVIAEGEVQQLI------NTHDASLDEAGYLHVIRSKTA 209
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L + + GA++A A + ++ +G+ LG FQ+ DD+LD D
Sbjct: 210 QLFEASAQLGAVLADAPREIEQACAIYGQALGTAFQIIDDVLDYTGDT 257
>gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
pv. campestris str. B100]
gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
pv. campestris]
Length = 332
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L GA+ + A ++ L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGADAQVQQCLYDYGMQLGFAFQIADDVLDYAADATDLGK 235
>gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanocaldococcus jannaschii DSM 2661]
gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methanocaldococcus jannaschii DSM 2661]
Length = 327
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 15/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ ++ID L + + +D+L +A ++ L GGK+IR +L L +
Sbjct: 15 KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDD 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AA+E IH Y+LIHDD+ MDN RRGKPTVH+ Y E AI+AG+ L AF
Sbjct: 66 IEEVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S K K + +++ + ++ ++ + + + + KTGAL
Sbjct: 124 EAVSRIKDNKKAHEVLKILSKACVEV---CEGQAMDMEFENYYPTMEEYLDMIRKKTGAL 180
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + GA+MA ++ E+E L+ + + +G+ FQ+ DD+LD D K
Sbjct: 181 LEASVGIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 228
>gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 334
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 18/238 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L ++ + + + + + + A GGK++R L A
Sbjct: 11 DLAEYLADDMAACNRAIVERMDSPVALIPQL-------AAHLVAAGGKRLRPLLTLASAR 63
Query: 64 LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + V A ++ +D +RRG + + + +++ G+
Sbjct: 64 LCGYEPDATHQRHVALAACVEFIHTATLLHDDVVDESTLRRGLASANAIFGNKASVLVGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +F++++ + NI S ++ LQ D + +
Sbjct: 124 FLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQM------STQNDLSTSIEKYLEVI 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL AC GA++A +E L +G NLG+ FQL DD LD D L K
Sbjct: 178 HGKTAALFAAACRVGAVVADQPLKVEEALDSYGTNLGMAFQLVDDALDYAADQATLGK 235
>gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
Length = 345
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A
Sbjct: 28 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 80
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 81 ALGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 138
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ + I S + LQ + D + + + +
Sbjct: 139 YSRAFQMMVDAGSMRIMEILSNATNVIAEGEVLQLLNM------HDPDVTVERYLQVIRY 192
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA+++ A +E +G +G FQL DD+LD
Sbjct: 193 KTAKLFEAAAQLGAVLSGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTASAE 244
>gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4]
Length = 331
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S + ++ + + + ++ ++ GGK++R ++
Sbjct: 1 MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A + AA+E +H ++L+HDD+ MD Y+RRG PTVH+++ E AI+AG
Sbjct: 54 SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
+ L AFE ++ L + + ++I + + ++ E +
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEIISEGQAMDMSFENRVDVTEEEYVQ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ K KT L + G I+ AS + + L +G NLGI FQ+ DD+L D L K
Sbjct: 172 MIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEKELGK 231
>gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
Length = 329
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
S + + + ++ I+ + L + +Q + L++A GGK+IR LV A
Sbjct: 11 DSFLSTIAPDMEGVNRIIREQLHSNVPFI-SQIAEYLINA------GGKRIRPALVLLMA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A IE IH +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 64 RAFGYQGTQHQMLAAMIEFIHTATLLHDDV--VDEADLRRGKSSANALFGNAASVLVGDF 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T AF++I + + S + +Q + ++++ IDE + +
Sbjct: 122 LYTRAFQMIVAVNDMRILPVLSDATNLIAEGEVMQLV------NVRNPAIDEKRYMEVIY 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L + GA++AHAS+ E E +G +LGI FQL DDLLD + L K
Sbjct: 176 AKTARLFEVSAVLGALIAHASEKEIEAAAAYGRSLGIAFQLVDDLLDYAGETDVLGK 232
>gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 26 QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
+ + L A+RYA+L GGK++R LV A + A+R G A+E IH
Sbjct: 1 ALSQWVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHA 60
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
YSL+HDD+P MDN +RRGKPTVH+Q+ E +A++AG+ L AFE++ Q +
Sbjct: 61 YSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDA 120
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFACESGAIM 199
G G D + E Q+ + ++KTGAL+ + GA
Sbjct: 121 LQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAAC 180
Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ L +G+ LG+ FQ+ DD+LD D
Sbjct: 181 KEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSA 217
>gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
Length = 302
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
+ ++ ++ + ID D LL + RL A+R+A + GGK++R LV
Sbjct: 10 DMLARARDVAAHIDMGFDRLLA-----VPDDARARLYDAMRHAAIGGGKRLRPLLVQAAC 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+++ +ALRVG AIECIH YSLIHDDLP+MD+ +RRGKPTVH +DE TAI+AG+
Sbjct: 65 DLFHISRESALRVGLAIECIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDC 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
L AFE+++ +T +R +L+ +L G GM GGQM+D++ E V +
Sbjct: 125 LHDLAFEVLADAETHPDPFVRIELVKALATCSGPAGMAGGQMMDLEAERTRFDLATVTRL 184
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q +KTGAL+CF E+ AIMA Q + L + ++G+ FQ+ADDLLD E D+
Sbjct: 185 QNLKTGALICFCVEAAAIMARLPQEARTGLHGYARDIGLAFQIADDLLDVEGDVA 239
>gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5]
gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
Length = 301
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 143/227 (62%), Gaps = 11/227 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
I+T LD LL + L+ A+RYA+LGG K++R FLV E A LF+VN A+R
Sbjct: 21 IETELDVLLP-----LPEGEERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVR 75
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V AA+E +H YSL+HDDLP+MD+ +RRGKP+ H +DE TAI+AG+ L T AFE+++ P
Sbjct: 76 VAAAVEMLHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEP 135
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFA 192
T +R +L+L+L G +GM+GGQM+DI E + +Q +KTG L+ F+
Sbjct: 136 DTHSDPEVRCELVLALAAASGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFS 195
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
E+GAI+ A ++ + +G +LG FQ+ADD+LD E L K
Sbjct: 196 AEAGAILGRAPGPQRHHIAGYGRDLGAAFQIADDILDEEGSDASLGK 242
>gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
Length = 322
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 17/231 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
+ S + ++ + +D ++ L + Y + GG K++R LV A
Sbjct: 6 IKSCIAQDMQAVDAVIRKSLHSDVVLIN--------QVAEYIINGGGKRLRPALVLLSAG 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ +
Sbjct: 58 AFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATANTLFGNAASVLVGDFI 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ ++ + ++ + LQ + ++ D I + +
Sbjct: 116 YSRAFQMMVGVESMRVMEVLAEATNIIAEGEVLQLL------NVHDADITDEAYLKVIHY 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT L A GAI+ AS+ +++ + +G LG FQL DD+LD D
Sbjct: 170 KTAKLFEAATRLGAIICAASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGDS 220
>gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 348
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 30/251 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++E + ++ +D+ + QH +RL A RY L GGK++R + T A
Sbjct: 12 EAIRERRELVNAAIDE-------ELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAV 64
Query: 66 ----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
+ N + +R AIE I ++LIHDD+ MD +RRG P VH
Sbjct: 65 TGTDPLSADFREFAALDGNTVDVMRAAVAIEVIQSFTLIHDDI--MDEDDLRRGVPAVHE 122
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
QYD TAI+AG+ L + AFE ++ + + + + ML+ T +G +
Sbjct: 123 QYDISTAILAGDTLYSKAFEFMTETGSDPANGLEAMRMLATTCTEICEGQSLDVSFES-R 181
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ I + + ++KT L + + A++ A + L +G + G FQ+ DD+LD
Sbjct: 182 DDILPEEYLEMVELKTAVLYGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDDVLD 241
Query: 230 CE---EDLPKK 237
E+L K+
Sbjct: 242 LTVASEELGKQ 252
>gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
Length = 324
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + + + L I Y L LGGK++R L + +FNV+ A+ AI
Sbjct: 9 DKIANHFSQIVANKEPKNLYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAI 68
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E H +SLIHDD+ MD+ +RRG TVH ++D T I++G+ +I + +
Sbjct: 69 EVFHNFSLIHDDI--MDDAPLRRGNQTVHEKWDLNTGILSGD------AMLILAYQFFEN 120
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
++ L+ + + GQ D+ E D+ + + + KT L+ A + G
Sbjct: 121 YEPKTFQKLAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMG 180
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+A S + + FG NLGI FQL DD LD +
Sbjct: 181 AIVAETSDENADLIYDFGLNLGIAFQLQDDYLDAFGNPE 219
>gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
Length = 347
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 81/245 (33%), Gaps = 12/245 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--------LLSAI-RYALLGGK 51
MN L++ ++ + L ++ ++R L + ++ GGK
Sbjct: 1 MN--FADYLKQKLPAVEAEIMRGLPAASTSPANASSERTHADLNTYLYQPLAHFSAGGGK 58
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
++R L A + AL VG AIE +LIHDD+ +
Sbjct: 59 RVRPVLCCLGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIADKSELRRGEKCLYKTLGT 118
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ + ++ + +LS+ + L +
Sbjct: 119 GLAINVGDSALVNVVRRVTVADHLSDQIKVRVIDALLSMEEHTLEGQALDLGWAQNERWD 178
Query: 172 IDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ Q + + GA++ A Q + L+ FG +G+ FQL DDLL+
Sbjct: 179 VTSDQYLFMALSKTAYYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQLQDDLLNL 238
Query: 231 EEDLP 235
D
Sbjct: 239 VGDAK 243
>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
Length = 293
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 129/234 (55%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L L + R+D +L + Q L +A+R+ AL+GGK+IR FLV
Sbjct: 2 LKLALADCQSRVDAVLAAHIDAL-----PQTAPALKAAMRHGALIGGKRIRPFLVYAVGE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L V+ R+ AA+EC+H YSLIHDDLP+MD+ +RRGKPTVHI +DE TAI+AG+ L
Sbjct: 57 LLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
T AFEIIS L + ++ +L G GM GGQ L + + I ++ +
Sbjct: 117 QTLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLH 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KTGAL+ A E I A AS + LR + + +G+ FQ+ DD+LD
Sbjct: 177 NLKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDDILDITATTE 230
>gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 355
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 71/251 (28%), Gaps = 16/251 (6%)
Query: 1 MNGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLV 58
M + P+ E R D L L + + + + R+ L GGK++R
Sbjct: 1 MTATITPTDANELRARFDAELTAFLDRQDPDWPDGAPRGVFTTLHRFVLAGGKRLRPLFC 60
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
T + AA + + D + R I D T
Sbjct: 61 YWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDILDGSDRRRGEPSVHRIFADLHTRSS 120
Query: 119 AGNGLLTY-------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE- 170
Y ++ ++ Q+ M + +
Sbjct: 121 WRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRGYAVFSLMRTEVIAGEYLDL 180
Query: 171 -----FIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ +MK + + GA +A AS + L FG+ LG FQL
Sbjct: 181 VSGVGGGSVASALTVIRMKAARYTVTRPLQIGATLAGASSELVDALAEFGDPLGDAFQLR 240
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 241 DDVLGVFGDPA 251
>gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
Length = 324
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L+ + R++ +++ + + + +Q ++ A GGK++R L
Sbjct: 8 FQQNLEHDLSRVNLVVNQAVQSDVALI-SQIGTYIIGA------GGKRLRPILTILSGKC 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + + + + +Q M G + + Q + + K
Sbjct: 119 TRAFQLMVGSGSLKILEVMADATNIIAEGEVMQLMNIGNIDITE------AQYLQVIQYK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L A + GAI+A A+ ++ L+ FG +G FQ+ DD+LD
Sbjct: 173 TAKLFEAAAQVGAILAGATHEQETALKNFGMYMGTAFQIIDDVLDYSG 220
>gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
Length = 291
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + ++++ I+ L+ S+ N + + Y+L +GGK+IR L
Sbjct: 1 MSNIIEKHRDFINKYLNVYFNDKGSY-----NKIIYDSASYSLNIGGKRIRPILFLLTYG 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L+ N+ + + +AIE IH YSLIHDDLP MDN +RRG PT H ++ E A++AG+ L
Sbjct: 56 LYKENYKDVIEMASAIEMIHTYSLIHDDLPCMDNDDLRRGMPTNHKKFGENIAVLAGDML 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
L A ++ + + G +GM+GGQ++D+ +E I + ++ +
Sbjct: 116 LNEAMSLM-IKFSIKNGAKALLASREIAEAAGPEGMIGGQIVDVINEGKLISKEELLYMH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ + + AI+A A + + E L FG LG+ FQ+ DD+LD D+ K
Sbjct: 175 SKKTGELIRVSIIAAAILADAPKKDIEILNDFGLKLGLAFQIKDDILDITGDISK 229
>gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
Length = 334
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 88/238 (36%), Gaps = 18/238 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L ++ + + + + + + A GGK++R L A
Sbjct: 11 DLAEYLADDMAACNRAIVERMDSPVALIPQL-------AAHLVAAGGKRLRPLLTLASAR 63
Query: 64 LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + VG A ++ +D +RRG + + + +++ G+
Sbjct: 64 LCGYQPDATHQRHVGLAACVEFIHTATLLHDDVVDESSLRRGMASANAVFGNKASVLVGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +F++++ + NI S ++ LQ D Q +
Sbjct: 124 FLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQM------STQNDLSTRIDQYLEVI 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL AC GA++A + + L +G NLG+ FQL DD LD D L K
Sbjct: 178 HGKTAALFAAACRVGAVVAERDETVERALESYGTNLGMAFQLVDDALDYAADQARLGK 235
>gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell
isolate TM7a]
Length = 269
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 12/244 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ L L+E K ++ D L++ + + ++ ++L A+ YA++ GGK+IR L+
Sbjct: 3 DKMLQKYLKEKKKVVE----DNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYM 58
Query: 61 CASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
LF+ N + ++ A+E IHCYSL+HDDLP+MDN RRGK TVH +Y+E +
Sbjct: 59 ICDLFDENKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGV 118
Query: 118 IAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ G+ LLT AF +++S K ++ LS ++ + + ++
Sbjct: 119 LVGDVLLTEAFGVVASAKNLEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDT 178
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I KTG L+ A E I + + +++ + + LGI FQ+ DD+LD E +
Sbjct: 179 LKYIHAHKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEE 238
Query: 234 LPKK 237
+ KK
Sbjct: 239 IGKK 242
>gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium
diphtheriae NCTC 13129]
gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium
diphtheriae]
Length = 330
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 19/236 (8%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L ++ R++ +L + L + + + + A GGK+ R +
Sbjct: 13 NLNEEIAAGMIRVEDLLREELSKGEDFL-------VEKVMHLAEAGGKRFRPMFALLASQ 65
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + AA+ + MD RRG + + +++ AI+AG+ L
Sbjct: 66 -YGSQPMSENVIKAAVVVEMTHLATLYHDDVMDEADKRRGVDSANFRWNNSVAILAGDIL 124
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L + +++ ++ + + + + + +
Sbjct: 125 LAHVARLMA--------DLGVETVAHFSETFAELVTGQMRETIGARDGDPIEHYLNVINE 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG L+ A G++ A AS E LR +G +G++FQ+ DD++D D K
Sbjct: 177 KTGVLIASAGFLGSMHAGASAEHVEALRAYGRAIGMVFQIVDDIIDIFSDTTDSGK 232
>gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42]
gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42]
Length = 327
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ + +D ++ L + + + + GGK++R L+
Sbjct: 13 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIIS-------AGGKRLRPALLLLTCGALE 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T
Sbjct: 66 YKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHTR 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + + Q M + D +DE + + KT
Sbjct: 124 SFQMMVEAGSMRILQVLADATNVIAEGEVQQLM------NTHDASLDEAGYLHVIRSKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D
Sbjct: 178 KLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGDA 225
>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 297
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 12/226 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ +L E + ++ L+ L D LL A+ Y+LL GGK++R L A
Sbjct: 2 TIKGRLAERALGVEKYLEGCLRNR------GIPDSLLQAMEYSLLAGGKRLRPVLTLAWA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ + + A++ECIH YSLIHDDLP+MD+ +RRG+P+ H +YDE TAI+AG+G
Sbjct: 56 TMLGGDAERVMPFAASLECIHTYSLIHDDLPAMDDDDLRRGRPSNHKRYDEATAILAGDG 115
Query: 123 LLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
LLT +F ++ +S L + + L G GM+GGQ +D++ E ++
Sbjct: 116 LLTESFVLMTEASLIRGLPAERVLRAVSVLAVAAGSGGMVGGQAVDMEFTGRAEVALDEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ MKTGAL+ ACE GA++A AS+ + E R +G +G+ FQ+
Sbjct: 176 RAMHAMKTGALITAACECGAVLAGASERDVENAREYGRAVGVAFQI 221
>gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 337
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
M+ L +L EN R+ L + + + L + RY L G GK+IR FL
Sbjct: 6 MHEALTQELVENKYRL--YLSRINSALGNCFVRESPITLYAPARYILEGKGKRIRPFLTL 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + AL V A+E +H ++LIHDD+ MD +R G+PTVH +++ AI+
Sbjct: 64 LASEAVCGSSEHALNVALAVEILHNFTLIHDDI--MDQAELRHGRPTVHRRWNTNAAILT 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ ++ YA+E+ +++ + + NI + + +
Sbjct: 122 GDMMIAYAYELALEAQSERHGE---LVHILNDANITICEGQALDIELEEKNDATIADYLD 178
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG L+ A E+G + A+ + L FGE +G FQ+ DD LD + K
Sbjct: 179 MIAKKTGRLISAALEAGGVAGDATDEQLRSLVLFGEKIGQAFQIQDDYLDIMAEDGK 235
>gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
Length = 334
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 91/234 (38%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ ++ +L+ L + ++ +L GGK+ R +
Sbjct: 15 DAQLTERINAGMAAVEDLLNTELDRGQDFIKD-------KVRHLSLAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A + + + ++ MD RRG + + ++ AI+AG+
Sbjct: 68 SEFGERSQSPEVVKAATVVEMVHVATLY-HDDVMDEAERRRGVDSANFRWTNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T ++ L + + G+ ++ +
Sbjct: 127 ALLAHASRLMSQLDTHTV-EHFAETFEELVTGQMRETIGAGEANAVEHYTA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L+ A GA A A + E LR G +G+IFQ+ DD++D D
Sbjct: 179 REKTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIFQIVDDVIDIFSDSE 232
>gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 323
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ LDDL+ + + + H +A GGK++R +V + +
Sbjct: 2 NTVTELLQPVENDLDDLINELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAIS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 QDFTLTTKHKRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L Q + ++ KT
Sbjct: 122 QASWHLANLDNVKVVKLLSRVIMDLAEGEIKQNLNRFDSAQTF------SKYINKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ ++ + ++ L FG+N+G+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSTKAAGVLCNLEDDKLNHLYEFGKNIGLAFQVVDDILDFTGNDKQLGK 229
>gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1]
gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanospirillum hungatei JF-1]
Length = 320
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 9/233 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + L++ + ++++L D + + N L GGK++R L A
Sbjct: 2 ELETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLF-------AGGKRLRPALFKLAAD 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + MD RRG+ TVH + E AI+AG+ L
Sbjct: 55 AVTPGASQKIMQAGLALEVTHNFTLI-HDDIMDKDVYRRGQKTVHTLWGEPAAILAGDVL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AF +I + + +R+ +L+ T +G + +++ + +
Sbjct: 114 YARAFFLICNAEAPEGAKVRAISLLARTCEEICEGQQQDMSFEEREDVTR-DEYLDMITK 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L A G+++A S+ + + L +G +G FQ+ DDL+D K
Sbjct: 173 KTGVLYGAAAAIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLIDLLASSEK 225
>gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NN2025]
gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans
NN2025]
Length = 289
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+++ K I+ + + QT + L+ A+ Y++ GGK+IR L+ E F +
Sbjct: 1 MKDKIKYINQAIKHY------YAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGL 54
Query: 68 N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+V A++E IH SL+HDDLP+MDN RRG+ T H ++ E TAI+AG+ L
Sbjct: 55 VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLD 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F +++ + I+ LS + + ++ Q+ I KTG
Sbjct: 115 PFGLLAKADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTG 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ F + I+A S+ RLR GE +G+ FQ+ DD+LD +L K
Sbjct: 175 KLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227
>gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
Length = 322
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKKQLTSKVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETANAMWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + A+ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCGATVEQAEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
K601]
gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
K601]
Length = 349
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ + +D ++ L + + + + GGK++R L+
Sbjct: 35 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIIS-------AGGKRLRPALLLLTCGALE 87
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T
Sbjct: 88 YKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGDFLHTR 145
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + + Q M + D +DE + + KT
Sbjct: 146 SFQMMVEAGSMRILQVLADATNVIAEGEVQQLM------NTHDASLDEAGYLHVIRSKTA 199
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D
Sbjct: 200 KLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGDA 247
>gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 349
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ + +D ++ L + + + + GGK++R L+
Sbjct: 35 ALIADDMREVDKVIAARLQSSVPLVGSVAQYIIS-------AGGKRLRPALLLLTCGALE 87
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T
Sbjct: 88 YKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGDFLHTR 145
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + + Q M + D +DE + + KT
Sbjct: 146 SFQMMVEAGSMRILQVLADATNVIAEGEVQQLM------NTHDASLDEAGYLHVIRSKTA 199
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L + AI+A ++ + ++ +G+ LG FQ+ DD+LD + D
Sbjct: 200 KLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGDA 247
>gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01]
gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-03]
gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-07]
gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-22]
gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-26]
gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-32]
gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
3283-12]
Length = 356
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 18/239 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L + + ++ D + + + A GGK++R L A
Sbjct: 33 ALADYLASDMLACNQVIVDRMQSPVALIPQL-------AAHLVAAGGKRLRPLLTLAAAR 85
Query: 64 LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ N+ V A ++ +D+ +RRG + + + +++ G+
Sbjct: 86 MCGYNNQDGRMRHVEIAACVEFIHTATLLHDDVVDDSQLRRGLASANAIFGNKASVLVGD 145
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +F+I+++ + I S +L +Q D Q +
Sbjct: 146 FLFARSFQILTADASLGVMAILSAASATLAEGEVMQM------TTQNDLSTSVEQYLQVI 199
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KT AL ACESGA++ A+ ++E LR +G NLG+ FQL DD LD D L K+
Sbjct: 200 YGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLVDDALDYAADQATLGKE 258
>gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 313
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++D ++ L + + Y + GGK+IR LV A +
Sbjct: 1 MAAEMAQVDAVIHRRLASEVALINQIS--------HYIVSAGGKRIRPLLVLLFARALDF 52
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + A
Sbjct: 53 DGPERFEMAATVEFIHTATLLHDDV--VDESDLRRGRKTANAIFGNAASVLVGDFLYSRA 110
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ S ++ + + LQ + D I + + KT
Sbjct: 111 FQMMVSVNRLRVLDVLADATNVIAEGEVLQLLNM------HDPDISIEAYLRVIRYKTAK 164
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L + +GA++A S ++ +G LG FQL DDLLD E
Sbjct: 165 LFEASARTGAVLAGVSAPLEDSCASYGRCLGTAFQLIDDLLDYEG 209
>gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415]
gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415]
Length = 288
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
++ID L + + Q+Q + RL+ AI Y++ GGK+IR L+ E F +
Sbjct: 3 KLEKIDAALKEF------YEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELT 56
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+V AA+E IH SLIHDDLP+MD+ RRG+ T H Q+DE TAI+AG+ L +
Sbjct: 57 KAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYG 116
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+I+ + LS ++ +++ + QV+ I KTG L+
Sbjct: 117 LIAQTDLHPSIALALIADLSQASGSFGMVAGQMLDIEGEEQTLTLDQVYTIHSHKTGKLL 176
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
F ++ ++A +L G +G FQ+ DD+LD +L K
Sbjct: 177 AFPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDVTASFEELGK 226
>gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
Length = 305
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 127/243 (52%), Gaps = 13/243 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+ ++ R++ L + L + L A++Y LLGGK++R FL
Sbjct: 7 DAFAHQQRQAHDRVNQYLLNSLETL-----PFADLPLAQAMKYGTLLGGKRLRPFLTYAV 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ V+ AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI++ E A++AG+
Sbjct: 62 GEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLAGD 121
Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
L T+AF+++SS ++ D R ++ L + GL GM GGQ LD + + +D +
Sbjct: 122 ALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGLAGMCGGQALDLDAEGKRVDLAALE 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL--- 234
I + KTGAL+ A GA A + L + +G+ FQ+ DD+LD D
Sbjct: 182 RIHQHKTGALIRAAIRLGAYAAGEKGRQSIAILDQYANAIGLAFQVQDDILDVIGDSEIT 241
Query: 235 PKK 237
K+
Sbjct: 242 GKR 244
>gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
Length = 315
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 9/232 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
+ L RI+T L L + RL A+RYA LGG K++R+ L+ A
Sbjct: 29 MTEPLARYQTRIETALSRALPPAGA--------RLADAMRYATLGGGKRLRAALLYATAD 80
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F V + A+E IH YSLIHDDLP+MD+ +RRG+P+ H +DE TAI+AG+ L
Sbjct: 81 DFGVPPDSVDAAACAVEAIHAYSLIHDDLPAMDDDDLRRGRPSTHRAFDEATAILAGDAL 140
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T AF ++++ + L+ + + + Q+ I +
Sbjct: 141 NTLAFALLANSPLPPATRLAQIQTLADAAGWAGMIGGQMGDMAATGKTLTLPQLQAIHRG 200
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA+ A L GE+LGI +Q+ADD+LD +
Sbjct: 201 KTGALIRAALHLGALPAADYAAHAATLDELGEHLGIAYQIADDILDATANSA 252
>gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14]
gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14]
Length = 300
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/229 (36%), Positives = 120/229 (52%), Gaps = 10/229 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
+R + +L + L Q + LL A++Y LLGGK+ R FL + V
Sbjct: 14 YQQRSNDVLANWLS-----TQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AA+ECIH YSLIHDDLP+MD+ +RRG+PT HI +DE AI+AG+ L T AF+I
Sbjct: 69 DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDI 128
Query: 131 ISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGA 187
+++ + + R ++ L G GM GQ LD+ E Q+ +I + KTGA
Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGA 188
Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A GA+ A +L + E +G+ FQ+ DD+LD D
Sbjct: 189 LIRCAVRLGALAAGDKGVAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237
>gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea sp. MED297]
gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Reinekea sp. MED297]
Length = 293
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 128/237 (54%), Gaps = 12/237 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + L E +++ L Q +D L SAI Y+LL GGK++R LV +
Sbjct: 2 TLETFLTETKSSLESALTQSFQQ-------GVSDELTSAIHYSLLNGGKRLRPSLVRAAS 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L L A+E IH YSL+HDDLP+MD+ +RRGKPT H Q+ E TAI+AG+
Sbjct: 55 DLVRAPDGLWLIPAQALEMIHVYSLVHDDLPAMDDDDLRRGKPTCHRQFSEATAILAGDA 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
L + AF +I+ + IR ++ L + G +GM+GGQM+D + + + ++ +
Sbjct: 115 LQSEAFALIAGAEALSPRQIR-DMVRLLAQSAGARGMVGGQMIDLASEQKTLTLNELSDL 173
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++KTGAL+ + + GA+ RL +G+ +G+ FQ+ADD+LD K
Sbjct: 174 HRLKTGALISASLQLGALCHDSVDVEILARLARYGDAIGLAFQIADDILDVTGTTEK 230
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALR 74
L+ + + + + Q N+ L ++RY++ GGK+IR L+ +L+ N +
Sbjct: 6 AFLESVEMTMLTAISEQTNEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQ 65
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V AA+E +H YSLIHDDLP+MDN +RRGKPT H + E AI+AG+GLLT AF+++
Sbjct: 66 VAAAVELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQA 125
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + +L+ T ++ + + + Q+ I KTG L+ F+
Sbjct: 126 ELADDKKVACLTLLAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVI 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+G I+ AS E+ +L F LG+ FQ+ DDLLD E+L K
Sbjct: 186 AGGIIGGASAKEQAQLDSFARKLGLAFQIKDDLLDVLATTEELGK 230
>gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205]
Length = 323
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + +++ L+ LL S + H +A GGK++R +V +
Sbjct: 2 ATVAELLQPVESDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALA 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PQGELTSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLYRYDTGQSF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ +++ + L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSARAAGVLSGLPEDQLDCLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
91-118]
gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
91-118]
Length = 332
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMTAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + AS +++L +G LG FQ+ADD+LD DL K
Sbjct: 179 RKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235
>gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
Length = 295
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 11/239 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
MN L + + + + IL L Q +Q L A+RY+ L GGK++R LV
Sbjct: 1 MN-DLQLWQKRVAAQTEIILQQKLPQI-----SQEPVVLHEAMRYSALDGGKRLRPLLVW 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ L + AA+ECIH YSL+HDD+P MDN +RRGKPT H+Q+ + A++
Sbjct: 55 AASQLGDSVQAACEAAMAAVECIHVYSLVHDDMPEMDNDQLRRGKPTCHVQFGDAVALLT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
G+ L T AF+I+S T+L + +++ L G GM GGQ +D+ + D Q
Sbjct: 115 GDALQTLAFDILS-AATELPAERQLKMVQVLAKASGSLGMAGGQAIDLANVGKDMKQPAL 173
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL+ A + G + + ++ RL + LG+ FQ+ DD+LDCE D
Sbjct: 174 EQMHGLKTGALIRAAVQLGGLSCPQITADQLARLDAYAAKLGLAFQVIDDVLDCEADTA 232
>gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
Length = 306
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 126/245 (51%), Gaps = 13/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
+ +L + +R++ + D + N L+ A+RY A+LGGK++R +LV
Sbjct: 6 LTVDFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVY 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+F ++ AAIECIH YSLIHDDLP+MD+ +RRG+PT H+++ E AI+A
Sbjct: 61 ATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILA 120
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I+S + D R ++ L H G+ GM GGQ L+ + I T
Sbjct: 121 GDALQTLAFSILSEAAMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLTD 180
Query: 177 VFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL- 234
+ I + KTGAL+ A A + L + +G+ FQ+ DD+LD D
Sbjct: 181 LEQIHRHKTGALIRAAVRLGALAAGAAGREALPLLDRYANAIGLAFQVQDDILDVIGDTA 240
Query: 235 --PKK 237
K+
Sbjct: 241 TIGKR 245
>gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1]
Length = 346
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S ++++ ++++ + D + + Q +++A GGK++R L A
Sbjct: 26 DTLVSLVKDDLEKVNRTIIDRMHSPVELIP-QLAGHIIAA------GGKRLRPVLTLASA 78
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+
Sbjct: 79 KLAGHSGERHVKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 136
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ + I S+ + LQ + + + +
Sbjct: 137 LFSRSFELMVEDGSLPVLAILSRASSVIAEGEVLQLITANDTDTSE------DSYLEVIR 190
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL AC GAI+A + E++ L +G NLGI FQL DD+LD
Sbjct: 191 SKTAALFAAACRIGAIVADRPKAEEDALDSYGLNLGIAFQLIDDVLDYSA 240
>gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 285
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77
L+ L + + + L +Y+L GGK+IR L F++ +V A
Sbjct: 8 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 65
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS
Sbjct: 66 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSSSDLS 125
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L+ + + + + TQ+ I ++KTG L+ F +
Sbjct: 126 AQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAG 185
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I+A + E E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 186 IVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 227
>gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
HTCC2150]
Length = 332
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + +++ ++ + + + L+ A GGK+IR + A +
Sbjct: 14 LAKALADEMAQVNDMIRARMASEHAPRIPEVTAHLVEA------GGKRIRPMMTLAAAKM 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+ T ++ +D ++I+ G+ L
Sbjct: 68 CGYDGPYHINLAATVEFIHTATLLHDDV--VDESSQRRGRATANLLWDNKSSILVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF+++ ++ +I S ++ LQ QD DE + + K
Sbjct: 126 ARAFQLMVEAESLTVLDILSNASATIAEGEVLQM------TAAQDLETDEATYLKVVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL A E G ++A+A + L FG+ LGI FQ+ DDLLD + L
Sbjct: 180 TAALFSAATEVGGVIANAPAEHTKALFDFGDALGISFQIVDDLLDYDGSLA 230
>gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9917]
gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9917]
Length = 323
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 STVTELLQPVEQDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PSGDLTARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ D KT
Sbjct: 122 QASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLF------RYDTGQTFATYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ +++ S + + L +G LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSAKAAGVLSGESPDHLQALYHYGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
Length = 323
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S + E + ++T L+ LL S + H +A GGK++R +V + +
Sbjct: 2 STVTELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH ++D A++AG+ L
Sbjct: 62 AQGELSPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTAQTF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C + +++ S ++ + L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSCRAAGVLSGCSPSQLDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
238]
gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
238]
Length = 332
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ D + + + L+ A GGK++R L A +
Sbjct: 14 LAAALTDEMDAVNVLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAAKM 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + + + I + K
Sbjct: 126 ARSFQLMVETGSLRVLDILANASATIAEGEVLQLTAASDLATSEAVY------LQIVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A + + L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFSAALEVGGVIAQQDEALVKALYDYGDALGIGFQIVDDLLDYSG 227
>gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
Length = 296
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 129/238 (54%), Gaps = 6/238 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M S QE ++ L ++ H + ++ Y+LL GGK+IR L
Sbjct: 1 MKNKFISAYQEQKNYVEKCLKEI---AEKHTLKAIATLGMESMNYSLLAGGKRIRPILCL 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ A L+++++ L +A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+A
Sbjct: 58 QSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEAIAILA 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
G+GLL A+EI+ + + + + + + G+ GM+ GQ+LD+Q E
Sbjct: 118 GDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHGMVAGQVLDLQMENQRCDADLL 177
Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTG L+ + +GA++ AS+ + + ++LG++FQ+ DD+LD ++
Sbjct: 178 KKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADHLGLVFQITDDMLDVIGNVE 235
>gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
Length = 349
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L + + + I+ L L + +RY LLGGK++R L+
Sbjct: 32 NTLYAPVAAEMQLIEQRLRTELSSKHPFVD--------ELVRYGCLLGGKRLRPALLLLT 83
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + +E IH +L+HDD+ +D +RR TV+ ++D ++++ G+
Sbjct: 84 GKALGGITPAHLTLATVVEMIHTATLVHDDV--LDEAKVRRHLATVNARWDNESSVLLGD 141
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T+AF + S+ T + + + + LQ G Q ++ F I
Sbjct: 142 YLFTHAFHLASTLDTVVGCRVIGRATNIVCEGELLQKGSRGNFRLTQ------SEYFEII 195
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L +C GA + AS +++ FG +LGI FQ+ADDLLD +
Sbjct: 196 EGKTAELTACSCYLGAHFSAASVEVCDQMDGFGRDLGIAFQIADDLLDVLGEEK 249
>gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
Length = 291
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
+ L E ID LD L + +RLL A+RYA LG GK++R L
Sbjct: 26 KNWLAEVRPEIDAYLDACLQ----IPGSAATERLLEAMRYAALGPGKRLRPALTLAACEA 81
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +AL AA+E +H Y+L+HDDLP MD+ RRG+PTVH+ YDE A++AG+ LL
Sbjct: 82 VGGDRASALPAAAAVELLHTYTLVHDDLPCMDDDDERRGRPTVHVAYDEALAVLAGDALL 141
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF +++ + D + + T + L G + +++ ++E ++ + K
Sbjct: 142 SEAFGVLAKLGPRAGDAVAVLARRAGTAEL-LAGQVHDLVIEAREEAPSFEELEALHAAK 200
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
TGAL A E GAI AS ++ L +G +G+ FQ ADD
Sbjct: 201 TGALFAAAVELGAIAGGASAEDRANLARYGLAIGVAFQHADD 242
>gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
Length = 297
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L + + LD QT H+ RL+ A+RY+L GGK++R ++ ++ +
Sbjct: 5 ELDTLRQLFERSLDQ---QTRYHL---TPPRLIEAMRYSLKNGGKRLRPVMLLAVLAIQS 58
Query: 67 VNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + + A+E IH YSLIHDDLP+MDN +RRG+ T H ++ E AI+AG+ LLT
Sbjct: 59 EDLVKCGLKTAIALEYIHTYSLIHDDLPAMDNDDLRRGQATNHKRFGEGLAILAGDALLT 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQKMK 184
AF+ + S + + + + G ++ + Q I K
Sbjct: 119 DAFQFLVSDDLLDDRTKLALIDQLSQASGSWGMVAGQVGDIEAEQTPVDYQGLKQIHDQK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL FA E+GAI+ A + + LR FG + G+ +Q+ +DL+D
Sbjct: 179 TGALFRFALEAGAIIGGADASTCQALRQFGRHFGLAYQIHNDLMDVLGSQE 229
>gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
SK11]
Length = 301
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77
L+ L + + + L +Y+L GGK+IR L F++ +V A
Sbjct: 24 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS
Sbjct: 82 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSSSDLS 141
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L+ + + + + TQ+ I ++KTG L+ F +
Sbjct: 142 AQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAG 201
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I+A + E E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 202 IVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243
>gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG7H23]
Length = 328
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + ++++ + I LD ++ + + YA++ GGKK+R L
Sbjct: 1 MVETVDNRIKYIYEPIQAELDRVVEMLRGIAPQAGSSLKQGVLDYAVMSGGKKLRPALTL 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A+E +H SL+ ++D+ IRRG+ TV ++ A++
Sbjct: 61 LSAQFHPHDPTAPIIMATAVELLHIASLV--HDDTVDSSTIRRGRATVSSRWGGKVAVML 118
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + + S+ ++ L + + +
Sbjct: 119 GDYLFATSATYVCDTGDIRVIRRFSEAIMELARGELSEH------FSLHNWDQTVADYEE 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L C A E GA+++ AS++ + L+ +G +LG+ FQ+ DD+LD + +L K
Sbjct: 173 RTYDKTASLFCTASECGAVLSGASESHCQALKAYGYHLGMAFQIMDDILDFQGTEAELGK 232
>gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
Length = 294
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + I+ L + + + RL A+ YA GGK+IR LV +
Sbjct: 1 MSEMISYWQQEIENYLLTRIDEI-----PNISTRLKEAMLYACSSGGKRIRPLLVLLISH 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L V L V A++E IH YSLIHDDLP MDN RRGK TVH Q+DE TAI+AG+ L
Sbjct: 56 LEEVELQKVLPVAASLEMIHTYSLIHDDLPGMDNDDYRRGKLTVHKQFDEATAILAGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
LT FE ++ + +R+ +L + + + + I Q+ I
Sbjct: 116 LTLTFEELAQCQLSDAKKVRAIQVLGSASGASGMITGQMRDIASEHQEITLEQLKQIHAD 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L+ A G ++ + +E L FG + G+ FQ+ +DL D D K
Sbjct: 176 KTGQLLLAAIRLGLLVLEDATPYEEALLKFGVHFGLAFQIQNDLQDVCWDSEK 228
>gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
Length = 310
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/239 (35%), Positives = 118/239 (49%), Gaps = 10/239 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
+ L S L R + L L L+ A+++ ALLGGK++R FL
Sbjct: 14 DTALTSTLLHYQTRNNDKLAYWLASL-----GHQEQPLIQAMKHGALLGGKRVRPFLTYM 68
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF AA+ECIH YSLIHDDLP+MDN +RRG+PT H+ +DE +AI+AG
Sbjct: 69 TGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHVAFDEASAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
+ L T AF I++ + R Q++ L G GM GQ L + + +D +
Sbjct: 129 DALQTLAFTILAEGDLSPEGEAYRIQMVKELAAASGAAGMCLGQALDLSAEGKKVDVDTL 188
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A GA+ A +L F +G+ FQ+ DD+LD D
Sbjct: 189 ETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDTFSNAIGLAFQVQDDILDIISDTE 247
>gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
Length = 288
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 5/225 (2%)
Query: 16 IDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D + +Q+ L +++Y+L GGK+IR ++ + N ++ L
Sbjct: 1 MNKLIDIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGL 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E IH YSLIHDDLP+MDN RRG+ T H Y E AI+AG+ LLT AFE++S+
Sbjct: 61 NSALALEMIHTYSLIHDDLPAMDNDDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSN 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
T +++ ++ L+ G GM+GGQ ++ + + I + I K KTGAL+ F
Sbjct: 121 DTTIED-SVKVNIIQRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHKTKTGALLNF 179
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 180 SVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 224
>gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus
iheyensis HTE831]
gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Oceanobacillus iheyensis HTE831]
Length = 323
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+++ + I++ L D + ++ + L GGK+IR V + L N
Sbjct: 9 FLKKDMESIESALQDSIQANHPVLRDASTELLH-------AGGKRIRPVFVLLSSQLGNY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +V +E IH +L+HDD+ +D +RRGKPT Y A+ G+ +L A
Sbjct: 62 DLSKIKKVAVTLELIHMATLVHDDV--IDEAELRRGKPTTASIYGNRVAMYTGDYILARA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E I+ + S+ ++ ++ Q K KT
Sbjct: 120 LEEITEIPDPRVHQLLSKTLVEVSIGEIEQIEYKFNWEQNF------RDYLRRIKRKTAL 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ +C+ GAI+ + + +L +G +G+ +Q+ DD+LD +L K
Sbjct: 174 LIASSCKLGAIVGGLNDYQTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGK 225
>gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
Length = 301
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77
L+ L + + + L +Y+L GGK+IR L F++ +V A
Sbjct: 24 LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH SLIHDDLP+MDN RRGK T H ++DE TAI+AG+ L F ++SS
Sbjct: 82 ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSSSDLS 141
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L+ + + + + TQ+ I ++KTG L+ F +
Sbjct: 142 AQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAG 201
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
I+A + E E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 202 IVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243
>gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
5501]
gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
5501]
Length = 335
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 18/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+ L + ++ K+++ L ++ +T + + ++RLL+A GGK++R LV
Sbjct: 2 IKFELMPSINKDLKQVEQKLKEV-TETKFSLLYRISNRLLNA------GGKRLRPLLVLL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + + + +GA++E +H +LIHDD+ +DN RR + T++ + A+++G
Sbjct: 55 SGKLNDHSAQDLISIGASVELLHMATLIHDDV--IDNSLHRRSENTINQDWGNKVAVLSG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L T A +++ N ++ + Q + D D
Sbjct: 113 DLLYTQALKLLVEHGNDEIVNYMLDIVGLICEGEAKQAV------TNHDLNQDMKDYINK 166
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KT L+ +C+ GA+++ + + +G+NLGI FQ+ +DL D D L K+
Sbjct: 167 ITKKTALLIGASCKLGAMVSQVDAKKAAAMESYGKNLGIAFQIINDLNDIVADKEELGKE 226
>gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
Length = 298
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 9 LQENSK-RIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++E K +++ +++ + +Q+ L +++Y+L GGK+IR ++ +
Sbjct: 3 IKEMKKLQMNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKML 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N ++ L A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT
Sbjct: 63 NKDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLT 122
Query: 126 YAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AFE++S+ T + LS ++ + + I + I + K
Sbjct: 123 KAFELVSNDTTIEDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
TGAL+ F+ + +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 183 TGALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 234
>gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141]
Length = 293
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645]
Length = 293
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ D + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
Length = 291
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 120/238 (50%), Gaps = 12/238 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + +K++ L+ + A + L A+ Y+LL GGK+IR L+
Sbjct: 1 MAKTFSDYAKQVSEKLEHVFPTIAGPF-----ENLYKAMNYSLLAGGKRIRPVLMQLAYE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
IE IH YSLIHDDLP+MD+ RRGK T H + E TAI+AG+ L
Sbjct: 56 AVGGKAE-IDAYLCGIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEATAILAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
L AF ++ + + + + L+ G GM+GGQ ++ +++ ID+ + +I
Sbjct: 115 LNDAFCLMLEDALKSDSMEKVRAIHVLSMASGSAGMIGGQILDMESENKAIDQDTLDLIH 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTGAL+ A + GAI+ S E L +G+ +G +FQ+ DD+LD +L K
Sbjct: 175 LNKTGALISAATKMGAILGGGSPREVSLLEAYGKYIGKVFQIVDDILDQTSTIEELGK 232
>gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
36D1]
gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
36D1]
Length = 320
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S L+ + + I+ L + + A+ +Q L GGK+IR V A
Sbjct: 6 LYSFLKTDIELIEQELANAVASNAALIQQASESLLK-------AGGKRIRPVFVLLGAKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D+ +RRGKPTV ++D A+ G+ +L
Sbjct: 59 GDYEIERVKNVAVALELIHMASLVHDDV--IDDAELRRGKPTVKAKWDNRIAMYTGDYIL 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E I+ + I + ++ + Q + ++ K K
Sbjct: 117 ATALEYITKVEDLSAHQILADTLVEVCVGEIEQIKDKYRFHQNLRCYLRR------IKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
T L+ +C+ GAI + A +N +L FG N+G+ +Q+ DD+LD K+
Sbjct: 171 TALLIAASCQLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTG-TEKQ 222
>gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3]
gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Chlorobium chlorochromatii CaD3]
Length = 331
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
RI+ L + Q L + RY L G GK+IR FL + AL
Sbjct: 19 RINNALTACFSK-------QTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDAL 71
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
V A+E +H ++LIHDD+ MD +R G+PTVH ++ AI+ G+ ++ YA+E+
Sbjct: 72 DVALAVEILHNFTLIHDDI--MDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYELALQ 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
K + + + NI + M + + + KTG L+ A
Sbjct: 130 SKGSRQTE---LVHILNDANITICEGQALDMELEEMPDASMSDYLDMIAKKTGRLISAAL 186
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E+G + +A+ + L FGE +G FQ+ DD LD + K
Sbjct: 187 EAGGVAGNATDEQLRSLVLFGEKIGQAFQIQDDYLDIMAEAGK 229
>gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
Length = 364
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 79/233 (33%), Gaps = 7/233 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA 62
L + + +++ + Q M + L + Y+ GGK+ R +
Sbjct: 32 DFEEYLNVYADAVGDLVNTYIPQ---GMVADMDCYLYDPLLAYSKNGGKRHRPLICLAAC 88
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AL AAIE H +LIHDD+ + +
Sbjct: 89 AAVGGDVRKALSSAAAIEHFHTAALIHDDIADEATLRRGEPCLHLTYGMGLAINMGDLGL 148
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ- 181
L ++ P +R L ++G + + + ++I
Sbjct: 149 SLVNGT-VMKDPALDDHTKVRVVTELIEMTRRTIEGQAMDIGWARDERYDISPENYLIMA 207
Query: 182 -KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAI+ A++ E LR +G + G+ FQ+ DDLL+ E D
Sbjct: 208 THKTAHYSGAVPLAIGAIVGGATEGAIEALRNYGLDTGLAFQIQDDLLNIEGD 260
>gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911]
gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911]
Length = 320
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L + I+ L++ + + ++ +++ GGK+IR V A
Sbjct: 6 MYSFLDSDINIIEQSLEETVQAESPLLRN-------ASMHLLQAGGKRIRPVFVLLSAKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + +V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D TA+ G+ +
Sbjct: 59 GSYDISEIKKVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRTAMYTGDYIF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E+++ + I ++ ++ + Q D + + K K
Sbjct: 117 AKSLEVMTEIERPEAHEILAKTIVEVCVGEIEQI------KDKYRFDQNLRDYLLRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C+ GA+ A ++ ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 171 TALLIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFTGTEKELGK 225
>gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119]
gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119]
Length = 296
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L + E + I+ LD ++ + N +L +++Y+L GGK+IR LV
Sbjct: 1 MKMMLKKSMNELIEIINNNLDGIIKS------SPLNTKLEESMQYSLDAGGKRIRPVLVL 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N N+ L+ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+A
Sbjct: 55 LTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILA 114
Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT +FE+I++ K + ++ L+ +D ++ I+ +
Sbjct: 115 GDALLTKSFELIANDKNLDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLE 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I K KTGAL+ F+ S A +A+ ++ L CF E+LG++FQ+ DDLLD D K
Sbjct: 175 QIHKAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 232
>gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 322
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ I L ++ LQ +Q+ + Y L GGK+IR LV A L
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPGLVLLAARLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + + + LQ + + + + + KT
Sbjct: 118 FSLMVTDGDLRILKVLADATTIIAEGEVLQLVCTSDLDITV------ERYIEVVRSKTAI 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ ACE GAI+ A ++ L +G +LGI FQL DD LD
Sbjct: 172 LLSAACEVGAILGEADPVHRQALADYGMDLGIAFQLMDDTLDYTASEE 219
>gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1]
gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1]
Length = 293
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 11/233 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
Q++ ++ ++ + + N+RL A+ Y++ GGK++R LV A+
Sbjct: 6 QQHLPLVEKVMVAFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A++E IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+GLLT A
Sbjct: 60 METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + L+ ++ + + ++ + + KTGA
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGA 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA +G ++A+ ++ L F + G+ FQ+ DDLLD DL KK
Sbjct: 180 LIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232
>gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
Length = 334
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E + ++ + L + + + T L S GGK++R V A L
Sbjct: 21 REELEGVEEQIRKNLDSSVALVNTVAAHILNS-------GGKRVRPLFVLLSAHLCGYAG 73
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+G+ +E IH +L+HDD+ +D +RRG+ T + +I+ G+ L + A
Sbjct: 74 QDHQALGSLVEFIHTATLLHDDV--VDEADLRRGRRTASKVWGNQISILVGDYLYSRAIC 131
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I + Q + S+ + LQ G L + E++ I + KT L+
Sbjct: 132 QIVDFRNQGINEALSEACRKMAEGEVLQLYYNGNPL------MPESEYLRIIEHKTAGLI 185
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+C+ GAI+ A++ +E L FG+ LGI FQLADD LD + L K
Sbjct: 186 AASCKIGAIVGGATEELQEALFRFGQRLGIAFQLADDTLDYTANGEHLGK 235
>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
Length = 289
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
+ + L L A Q Q +RL ++ Y+L GGK+IR L+ F +
Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++
Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + LS + + + + Q+ I KTG L+ F
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ ++A S LR G+ +G+ FQ+ DD+LD ++ K
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227
>gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
Length = 333
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 11 MDLNAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N N L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 64 LAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 122 GDFLYTRSFQMMTELGSMKVLQVLADATNVLAEGEVLQLMNCNDPNTTE------ESYMR 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A + + +E L +G+ LG FQL DDLLD D
Sbjct: 176 VIYCKTAKLFEAATRLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLLDYTSDAE 231
>gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
Length = 342
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ + +D ++ LL + A GGK++R L+
Sbjct: 28 ALVADDMREVDKVIGQRLLSNVPLVDWV-------ARHIIAAGGKRLRPALLLMVCGALG 80
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L + A +E IH +L+HDD+ +D +RRG+PT + + ++ G+ L T
Sbjct: 81 YGGAHRLSLAAVVELIHTATLLHDDV--VDASTLRRGRPTANEIFGAPACVLVGDFLHTR 138
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+ + I ++ + LQ M D +DE + + KT
Sbjct: 139 SFQTMVETGNMRVMEILAEATNVIAEGEVLQLMNM------HDATLDEAGYLRVIRSKTA 192
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + GA++A +S + ++ +G+ LG FQ+ DD+LD + D
Sbjct: 193 KLFEASARLGAVLARSSPDIEQACATYGQALGTAFQIIDDVLDYDGDSA 241
>gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681]
gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Paenibacillus polymyxa E681]
Length = 792
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ ++ +I+ L T H ++L+ A Y+L G GK+IR L
Sbjct: 500 EDFMNTVETVRDQINNQLK----ITKPHGIEAMKEQLIDAANYSLEGDGKRIRPILTWVM 555
Query: 62 A-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + ++ + + ++E +H SLI DDLPS DN RRG+ T+H ++ TA + G
Sbjct: 556 GVNEYGLDASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHKVHNSATAELTG 615
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L+ A SS + + + + S + M LD + + + Q+ M+
Sbjct: 616 LYLIQKAIGEQSSLSQFNAETVLALIQYSAQKAEDM-CMGQAMDLDSKGKALTLEQLNMM 674
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG A++A A + E L+ F ++GI FQ+ DDLLD E D L K
Sbjct: 675 CFYKTGVAFEACLVMPAMLAQAEEPEIAALQKFAYHMGIAFQIKDDLLDVEGDMLLLGK 733
>gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 322
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+++ + +R++ L + +T + Q +LL A GGK++R +
Sbjct: 8 NQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKFYG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L V A+E IH +L+HDD+ +D RRG+PTV ++ V +I G+ LL
Sbjct: 61 YPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLLAK 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A E+++ I +++ + ++ Q + ++ K KT
Sbjct: 119 ALELLAQINHPEVSKILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYR------IKRKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
L+ +C+ GA+++ A + E L +G LG+ FQ+ DD+LD +L K
Sbjct: 173 MLISASCKLGALISAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225
>gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c]
gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c]
Length = 296
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 13/241 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
++ + + +D +L + + H T L +A++YALL GGK++R FLV
Sbjct: 2 TFETQQKRVHQHVDALLQAQIGKLGDHAPT-----LKNAMQYALLMGGKRMRPFLVYAVG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+ECIH YSL+HDDLP+MD+ +RRG PT HIQ+DE AI+AG+
Sbjct: 57 EALGIEQSDLDAPALALECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDA 116
Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
L T AFEII + + + R +L+ L G GM GGQ +D ++ I +TQ+ +
Sbjct: 117 LQTLAFEIIVNYPLSDFANAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLEL 176
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTGAL+ A + +++ S K L+ + +G+ FQ+ DD+LD D L
Sbjct: 177 LHSKKTGALITAAVKMASVLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLG 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 329
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+K I +L D LL+ +T R + Y GG K+IR L+ A +
Sbjct: 9 AKEIFDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREGGGKRIRPLLLLLSARSQSYR 68
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A R+GA +E +H +L+HDD+ +D +RRG+P+ + + ++AG+ L AF
Sbjct: 69 GAGATRLGAVVEMVHTATLVHDDI--IDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAF 126
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + ++ L + +Q G+ ++ Q + + + KT L
Sbjct: 127 RVALDERNFRVLDLLIGLTQQMVEGELMQLETLGRQVNSQ-------EYYDLIYRKTACL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A A+ E+E + +G NLG+ FQ+ DD+LD
Sbjct: 180 FEVSMRLGAVLAKATDAEEECMGEYGRNLGLAFQIVDDVLDLTATEE 226
>gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 260
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+++ + ++L+SA+RY LL K IRSFLV +S+FN+ A+ AAIE
Sbjct: 10 LVVEVNKLLPENSENKLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP MDN RRG+P+ H ++ E TA++AG+ LLT AFE++S
Sbjct: 70 IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFEVLS--------- 120
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ GM G I D D ++ I MKT L +CE GAI+
Sbjct: 121 --LLNCEIIKVLSQAIGMKGMVGGQILDIGADFDKIKEIHLMKTAKLFAASCEIGAIIGG 178
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A+ E+E L +G NLG+IFQ DD+ D E+D
Sbjct: 179 ATDKEREALYNYGINLGLIFQAKDDIEDYEQD 210
>gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
Length = 323
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 77/221 (34%), Gaps = 5/221 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
ID + L + + Y + LGGK++R L LF ++ AL
Sbjct: 2 IDAYFQTFEDYRQQNSFDGQPTALYAPVNYIMELGGKRLRPILALMGYELFKADYRPALP 61
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ AIE H +SL+HDD+ R + L+ ++
Sbjct: 62 LAYAIEIFHNFSLVHDDVM-DAAPLRRGQATVHTKWNLNAAILSGDVMLIYAYDYLLRLD 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
I Q + + + ++KT L+ A E
Sbjct: 121 APNRIAEIVKVFNRVAREVCEGQQLDIDFETRSDVSI---PEYLRMIELKTSVLIAGALE 177
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A AS ++ + L FG N+GI FQL DD+LD D
Sbjct: 178 MAGLAAGASMDDVQHLYEFGRNVGIAFQLQDDILDTFGDAA 218
>gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101]
Length = 323
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 90/234 (38%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V +
Sbjct: 2 ATVAELLQPVEADLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALA 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 ADGELTARHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTGQSF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ ++ + L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSARAAGVLSGLPAHQLDELYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 331
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
++ + ++ + L + ++ Y GG K++R LV A F
Sbjct: 20 IRNDLAAVEVAIRRAL--------DGPDPHIVELATYLQRGGGKRLRPALVLLAARNFQY 71
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L V AA+E IH +L+HDD+ +D RRG PTV++++ TA++ G+ L A
Sbjct: 72 DRERLLPVAAAVELIHMATLVHDDI--VDGATARRGLPTVNVRWGTGTAVLTGDFLFARA 129
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++++ + ++ + ++ Q ++ + KT
Sbjct: 130 FSLLAADGDNRVVQVMAEAVYEMSTGEIEQQAQLFDPSTGEEGYYRR------IYKKTAH 183
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ C G +M A++ + E LR +G +G+ FQ+ DD+LD L K
Sbjct: 184 FISHCCLMGGLMGGATEQQAEALRRYGYGIGMGFQVIDDILDLTGSPEQLGK 235
>gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Corynebacterium jeikeium ATCC 43734]
gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Corynebacterium jeikeium ATCC 43734]
Length = 336
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L L ++ ++++ +L D L S + + L A GGK+ R
Sbjct: 16 DAQLNEALGQSMQQVEQLLKDRLSVGESFLTDKI-SHLFEA------GGKRFRVMFALLA 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AA+ + + ++ MD RRG + + +++ AI+AG+
Sbjct: 69 AHYGEKPTAQEVHEAAAVVELTHLATLY-HDDVMDESDQRRGAESANKRWNNSVAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A EI+++ Q ++ L + + D + + +
Sbjct: 128 YLFAIASEIMATLGAQTV-QHFAETFQELVTGQMRETIGARDGEDEIEHY------LTVI 180
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + AS+ +E L FG N+G IFQ+ DD++D D
Sbjct: 181 QEKTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWADPE 234
>gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116]
gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116]
Length = 294
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 33 TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
L+ A++Y LLGGK++R FLV + +AIECIH YSLIHDD
Sbjct: 24 PHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIHDD 83
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLML 148
LP+MD+ +RRG+PT HI++DE TAI+ G+ L T AF I++ I+ L
Sbjct: 84 LPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGALNPNAENQRIKMVQAL 143
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEK 207
+ G + L ++ + + I + KTGAL+ A + GA+ A
Sbjct: 144 AQASGAGGMCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAAGEKGLEVL 203
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + + +G+ FQ+ DD+LD D
Sbjct: 204 PHLERYSKAIGLAFQVQDDILDIISDTE 231
>gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
13031]
gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
13031]
Length = 324
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+++ + ++ + ++ Q + N + RY L GK+IR LV A L
Sbjct: 3 IKDVTASVNDEI-EIFQQRYKTVLYAQNTLVDKVTRYVLKQQGKQIRPALVLLSAQLCGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ R +E +H +LIHDD+ +D +RRG +++ + +++ G+ LL+
Sbjct: 62 VNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSRG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
K ++ S+ + ++ LQ + I E + KT +
Sbjct: 120 LLYSLEHKDYGFLHMVSEAVRRMSEGEILQI------QKTRSLDISEEDYLSVISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ AC GA+ + ++ L+ +GE LG+ FQ+ DDLLD D K
Sbjct: 174 LISSACAMGAMSSTTDESAIASLKSYGEYLGLAFQIRDDLLDYTGDSKK 222
>gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
15826]
gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
15826]
Length = 326
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 14/237 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLV 58
M+ L + + + + + MQ++ L ++YA+ GGK+ R L
Sbjct: 1 MSKRLSD--EAIRQLVQQDMQATEALMRAEMQSEVP--LAELVMQYAIGDGGKRFRPLLT 56
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L + A+ A IE IH +L+HDD+ +D +RRGKP+ +I + +++
Sbjct: 57 LLSCGLCDYRGEHAITAAAFIEFIHNATLLHDDV--VDESALRRGKPSANIAFGNAASVL 114
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L T AF+++ + + + + +Q ++ D +DE + +
Sbjct: 115 VGDFLYTRAFQLMVRTGNSAVIAMMADAVNLIAAGEVMQL------GNMHDPDVDEPRYY 168
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KT L AC++ ++A + E+L +G LG+ FQ+ DDLLD D
Sbjct: 169 RVIELKTAVLFAAACKTAGLLAGLPEARSEQLAVYGRKLGMAFQIMDDLLDYTGDEA 225
>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
Length = 296
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L + L + R D L + + + L A+ + ALLGGK+IR FLV
Sbjct: 1 MTLLLKT-LSQYQSRTDQQLTKYIDLQSPLCLS-----LNKAMYHGALLGGKRIRPFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ T + A+EC+H YSLIHDDLP+MD+ +RRG+ T HI + E AI+A
Sbjct: 55 VVGDMLGSQLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILA 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
G+ L + AF+I+S +L + + +++ L G +GM GQ L +++ +D T +
Sbjct: 115 GDALQSLAFDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTML 174
Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I + KTGAL+ A E + K+ L + +G+ FQ+ DD+LD D
Sbjct: 175 ESIHRAKTGALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSDSQT 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 289
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
+ + L L A Q Q +RL ++ Y+L GGK+IR L+ F +
Sbjct: 2 VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++
Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + LS + + + + Q+ I KTG L+ F
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++A S LR G+ +G+ FQ+ DD+LD
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVT 219
>gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 291
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E ++ID + D Q A +D L+ +I Y++ GGK+IR L+ E F++
Sbjct: 4 EEKIRQIDQTIIDYYSQQA------VSDSLVESILYSVQAGGKRIRPLLLLELVEAFDLP 57
Query: 69 HLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LQPAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ + + + + LS ++ + +D ++ I KTG
Sbjct: 118 CGLIAVAELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELKAIHAHKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ F + ++A + + +LR GE +G+ FQ+ DD+LD +L K
Sbjct: 178 LLAFPFVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDVTASFEELGK 229
>gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
Length = 323
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 10/225 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L +L + +H +A GGK++R +V + + R
Sbjct: 11 VEADLKELSENLTRLISARHPILGAAAEHLFSAGGKRVRPAIVLLASRATLGDRPLTQRH 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
E ++ +D +RR PTV+ +D A++AG+ L + +++
Sbjct: 71 RRLAEITEMIHTASLVHDDVVDEAALRRSVPTVNSLFDNRIAVLAGDFLFAQSSWYLANL 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S+++ QG+ + +I+++ KT +L+ + +
Sbjct: 131 DNLTVVKLLSEVIKDFAEGEIQQGLNRFDTGMNLEIYIEKS------YYKTASLIGNSAK 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A+++ +RL +G NLG+ FQ+ DD+LD L K
Sbjct: 185 AAAVLSEVDPEIGDRLYDYGRNLGLAFQIVDDILDFTGSTDVLGK 229
>gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 323
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 94/234 (40%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 ATVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 ADGELSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVETVHSRFNYRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRFDTGQSF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ +++ S+ + E L +G LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSAKAAGVLSGLSEPQLESLYHYGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4]
gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4]
Length = 295
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ + R++ +LDD+L RL A+RYA+LGG K++R+ L
Sbjct: 2 DFNAWSLDIQTRMERVLDDILPA-----ANIIPSRLHGAMRYAVLGGGKRVRALLAHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+
Sbjct: 57 EFCQAPISAVEQSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L T AF++++ P + ++ L G +GM GGQ +D+ + +T++ +
Sbjct: 117 LQTLAFKVLAEPGLLRDAARQLHMVHILAMASGSRGMAGGQAIDLASVGLDLTQTELEQM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL+ A GA A + + + + + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HIHKTGALIRAAALLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGK 236
>gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 323
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + + L A + GGK+IR +V + + LR
Sbjct: 11 VEADL-RLLAENLKQLVGNRHPILFMAAEHLFGAGGKRIRPAIVLLISRATMLEEDITLR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESQMRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIMDLATGEIQQGINCFDNGISI------ETYLKKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
++ A+++ AS E L +G +LG+ FQ+ DD+LD D L K
Sbjct: 184 KAAALLSDASPETAENLYDYGRHLGLAFQIVDDILDFTSTTDTLGK 229
>gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
Length = 297
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
+ +T+L++L+ + L A+RYA+LGG K++R LV + L +
Sbjct: 14 QAQTETLLENLMPS-----ENHAPQELHRAMRYAVLGGGKRLRPLLVLAASELGQADPDA 68
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AA+E IH YSL+HDD+P+MDN +RRGKPT HI Y E A++AG+ L T AF+II
Sbjct: 69 TAHAMAAVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDII 128
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALM 189
+ L R Q+ +L G GM GGQ +D + + ++++ + ++KTGAL+
Sbjct: 129 T-RPAALPAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALI 187
Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A G + L + LG+ FQ+ DD+LDC D
Sbjct: 188 RAAVRLGGLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAADTA 234
>gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
Length = 298
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 14/240 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L R++ L L Q + +L A+ Y+L +GGK++R LV A+
Sbjct: 2 IEQHLNACKARVEACLVAQLNQL-----PRSEVQLADAVAYSLKVGGKRLRPALVYSAAA 56
Query: 64 LFNVNHLTALRV-------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ AAIE IH YSL+HDDLP+MDN +RRG+PTVH QYDE TA
Sbjct: 57 SLRADLTLFPPNLTPLDLAAAAIESIHTYSLVHDDLPAMDNDDLRRGQPTVHRQYDEATA 116
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
I+ G+ L +AFE+++ T D + + L+ + +
Sbjct: 117 ILVGDALQAWAFELLTQIDTLPADKVVAMVKELAQASGPKGMVLGQALDMQATGASESVD 176
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + +KTGAL+ A GA +A E+ L +G+ +G+ FQ+ DD+LD D
Sbjct: 177 YLKQLHSLKTGALIRSALRLGAYCMNAGSKERRVLSAYGDAIGLCFQVVDDILDVTTDSA 236
>gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803]
gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803]
Length = 323
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 TTVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEGELSPRHRRLAEITEMIHTASLVHDDVVDEAGTRRGVETVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ D KT
Sbjct: 122 QASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLF------RYDTGQTFETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ ++ + E L +G LG+ FQ+ DD+LD L K
Sbjct: 176 ASLVANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTGSEQQLGK 229
>gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
Length = 293
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Query: 15 RIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+++ +++ + +Q+ L +++Y+L GGK+IR ++ + N ++
Sbjct: 5 QMNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQG 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT AFE++S
Sbjct: 65 LNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVS 124
Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ T + LS ++ + + I + I + KTGAL+ F
Sbjct: 125 NDTTIEDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNF 184
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 185 SVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 229
>gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 322
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 13/232 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ E + L + + + N + ++ + GGK+IR L A
Sbjct: 1 MNELLRYFQRELPGINQFLDAEAEA-LNGLVRDVAKHIIGSGGKRIRPMLTLLFARAMGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + ++E +H +L+HDD +D+ +RRG+ H+ + I+AG+ LL A
Sbjct: 60 DRDDYHAIACSLELLHSATLLHDDY--LDDAELRRGRSAAHLVFGRTETILAGDALLALA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E+ + + ++ ++ + + I KT
Sbjct: 118 NEMGARYGNARLCWLLARGIMETAVGEIEEIRFSKHPTLDR------EAYMNIIIGKTAR 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ AC GA +A A+ +++ +G NLGI FQL DD LD + K
Sbjct: 172 LIECACRCGAALAGATPEQEDAAGEYGLNLGIAFQLVDDALDYASPTSETGK 223
>gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
Length = 353
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L L ++ ++++ +L D L S + + L A GGK+ R
Sbjct: 33 DAQLNEALGQSMQQVEQLLKDRLSVGESFLTDKI-SHLFEA------GGKRFRVMFALLA 85
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AA+ + + ++ MD RRG + + +++ AI+AG+
Sbjct: 86 AHYGEKPTAQEVHEAAAVVELTHLATLY-HDDVMDESDQRRGAESANKRWNNSVAILAGD 144
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A EI+++ Q ++ L + + D + + +
Sbjct: 145 YLFAIASEIMATLGAQTV-QHFAETFQELVTGQMRETIGARDGEDEIEHY------LTVI 197
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + AS+ +E L FG N+G IFQ+ DD++D D
Sbjct: 198 QEKTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWADPE 251
>gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae
642]
Length = 322
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMDVMKILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +AS+ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNASEAQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
Length = 324
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ +++ I+ + + + S +Q L L GK++R L + LF
Sbjct: 5 TTYIEQELPYINAAIKKSIAELPSSIQPVAEHIL-------LSKGKRLRPMLTILLSRLF 57
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N + ++E +H +L+HDD+ +DN +RR T H + V+ I+AG+ LL
Sbjct: 58 GYNEDDIYPLAISVEFLHAATLLHDDV--LDNALLRRNTITAHNLFGTVSTILAGDALLA 115
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
++++ Q SQ + H L+ G++ + ++ + I KT
Sbjct: 116 KGNLLVATYGCQKCILTISQALYQTAHGEILEIYNQGEIWENKNIY------LEIITGKT 169
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
++ AC+ GA+ A A+ + + FG NLGI FQ+ DD LD +D K
Sbjct: 170 AWVIQAACKVGALKAGATPQQVDVAALFGYNLGIAFQIIDDALDFLPSKDTGK 222
>gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 302
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 100/244 (40%), Positives = 138/244 (56%), Gaps = 16/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M ++L ++ + +LD + Q+ RL+ A+RYA+L GGK++R+ LV
Sbjct: 1 MT-DFTAQLATDADQCADMLDMIFNA-----QSMQAPRLVDAMRYAVLNGGKRMRAGLVL 54
Query: 60 ECASL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
A L ALRV AA+EC+H YSLIHDDLP+MD+ RRGK + HI YD
Sbjct: 55 GAARLAATESDASTYIDSRALRVAAALECLHAYSLIHDDLPAMDDADTRRGKSSCHIAYD 114
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
E TAI+AG+ L T AFEI++ T +R L+ +L GL GM GGQMLD+Q E
Sbjct: 115 EATAILAGDALQTLAFEILADDATHPDPAVRVALVTTLARASGLAGMAGGQMLDLQAETR 174
Query: 173 DET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T + +Q MKTGAL+ A GA++ AS + + + LG+ FQ+ADDLLD
Sbjct: 175 TLTLAETEQMQMMKTGALIVCAASCGALVGEASSTLVNAIVAYADKLGLAFQIADDLLDY 234
Query: 231 EEDL 234
+ D
Sbjct: 235 DGDS 238
>gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
Length = 288
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ +++ + +Q+ L +++Y+L GGK+IR ++ + N ++ L
Sbjct: 1 MNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGL 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT AFE++S+
Sbjct: 61 NSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN 120
Query: 134 PKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T + LS ++ + + I + I + KTGAL+ F+
Sbjct: 121 DTTIEDSVKVSIIKRLSKASGHWGMVGGQALDMESEGKSIRLETLESIHETKTGALLNFS 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 181 VMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 224
>gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 291
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 13 SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
S D + + + T RL +A+R+A+LGG K++R LV +LF
Sbjct: 3 SALFDHWIARTERSLEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAE 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSL+HDDLP+MD+ +RRG+PTVHI +DE TAI+AG+ L T AFE
Sbjct: 63 DQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFE 122
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++++ + + L+ +D + + + +KTGAL+
Sbjct: 123 LLATASASAELRVSWIQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA+ A+ +++RL F + LG+ FQ+ DD+LD E
Sbjct: 183 RAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVESSSA 228
>gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L + ++ L L RLL+++ Y+LL GGK++R LV
Sbjct: 2 TFKEDLGRRAALVEAYLVGCLRDRN------IPARLLASMEYSLLAGGKRLRPVLVLAWN 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A+ A++ECIH YSLIHDDLP+MD+ +RRG+P+ H Q+DE TAI+AG+G
Sbjct: 56 GLLGGDADKAMPFAASMECIHTYSLIHDDLPAMDDDDLRRGRPSNHKQFDEATAILAGDG 115
Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQV 177
LLT AF +++ + + L G GM+GGQ M + ++
Sbjct: 116 LLTEAFVLMTETCLVKGLPAERVLRAIAVLARAAGSGGMVGGQAVDMELTGRTGVPLDEL 175
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ MKTGAL+ ACE GAI+A A++++ + R FG +G+ FQ+
Sbjct: 176 KKMHAMKTGALLTAACECGAILAGAAESDVDNARRFGRKIGVAFQI 221
>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
Length = 289
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
+ + L L A Q Q +RL ++ Y+L GGK+IR L+ F +
Sbjct: 2 VASKLQRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V A +E IH SLIHDDLP+MDN RRG+ T H YDE TAI+AG+ L F ++
Sbjct: 62 QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + LS + + + + Q+ I KTG L+ F
Sbjct: 122 VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPF 181
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ ++A S LR G+ +G+ FQ+ DD+LD ++ K
Sbjct: 182 VAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227
>gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45]
gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45]
Length = 289
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 128/235 (54%), Gaps = 14/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + D ++ A+ + A+RYA +GGK +R +LV E A L
Sbjct: 2 FRDSLATGASAVAAHFDHVIGALATL-------PVTEAMRYATVGGKGLRGWLVLEGARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V AL AIE IH YSL+HDDLP MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 HGVPQAQALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
FE+++ P+ +R+ L LSL G +GM+ GQ LD+ E D ++ +
Sbjct: 115 ALGFELVADPRCHPDAGVRADLTLSLARAAGARGMVLGQALDMAAETADTPLTLDEITAL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q KTGAL+ ++ E+GA +A A L + + LG+ FQ+ADD+LD E D
Sbjct: 175 QAGKTGALITWSAEAGARLAQADPG---PLTSYADRLGLAFQIADDILDVEGDAE 226
>gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51]
gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 322
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+++ + +R++ L + +T + Q +LL A GGK++R +
Sbjct: 8 NQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKFYG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L V A+E IH +L+HDD+ +D RRG+PTV ++ V +I G+ LL
Sbjct: 61 YPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLLAK 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A E+++ I +++ + ++ Q + ++ K KT
Sbjct: 119 ALELLAQINHPEVSKILAEVSVEMSQGEIQQIKASNDVNQNLKQYYYR------IKRKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
L+ +C+ GA+++ A + E L +G LG+ FQ+ DD+LD +L K
Sbjct: 173 MLISASCKLGALVSAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225
>gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
Length = 298
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 80/233 (34%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
Query: 9 LQENSK-RIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++E K +++ +++ + +Q+ L +++Y+L GGK+IR ++ +
Sbjct: 3 IKEMKKLQMNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKML 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N ++ L A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT
Sbjct: 63 NKDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLT 122
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKM 183
AFE++S+ T +++ ++ L+ G GM+GGQ ++ + + I + I +
Sbjct: 123 KAFELVSNDTTIED-SVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHET 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ F+ + +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 182 KTGALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 234
>gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
Length = 287
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 133/239 (55%), Gaps = 18/239 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ +L E + + LD +L + L A+RYA GGK++R++LV E A L
Sbjct: 1 MQERLAEVAAGVAAHLDHVLAPFGT-------GELAQAMRYATEGGKRLRAYLVIEGARL 53
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V A+ AIE +H YSL+HDD+P MD+ +RRG+PTVH ++DE TA++ G+ L
Sbjct: 54 HGVPAEQAIWPATAIEALHAYSLVHDDMPCMDDDDLRRGRPTVHRKWDEATAVLVGDALQ 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
+ AFE ++ P+ +R++L L L G QGM+ GQ LDI E ++ +
Sbjct: 114 SLAFECVADPRAG-SGEVRAELCLGLARAAGGQGMVLGQALDIAAETAGTPLSLDEITTL 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
Q KTGAL+ ++ +GA+MA A L + + +G+ FQ+ADD+LD E + K
Sbjct: 173 QAGKTGALIIWSGIAGAVMAGADP---APLTRYAQAVGLAFQIADDILDVEGCAEETGK 228
>gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
Length = 287
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 15/233 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++L ++ I T L +L + + +RYA GGK+IR FL+ E A L
Sbjct: 1 MQARLAAEAEVIQTHLTRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLLMESARL 53
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V +AL AIE +H YSL+HDDLP+MDN +RRG+PTVH+++DE TAI+ G+ L
Sbjct: 54 HAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHVKWDEATAILVGDALQ 113
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
+ AFE+++ +R+ L L+L G QGM+ GQ LDI E ++ +
Sbjct: 114 SLAFELVA-HPDCGPAAVRADLTLTLARAAGGQGMVLGQALDIAAETATTPLSLDEITTL 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
Q KTGAL+ ++ +GA MA A L + LG+ FQ+ DD++D D
Sbjct: 173 QAGKTGALILWSATAGARMAMADS---APLSTYARALGLAFQIQDDVIDVTGD 222
>gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y4.1MC1]
gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
Y4.1MC1]
Length = 321
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L + + ++ L++ + + + +A+ GGK+IR V A
Sbjct: 5 AMYSFLNADLRAVEKELEETVRSDYAQLSE-------AALHLLQAGGKRIRPVFVLLAAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V A+E IH SL+HDD+ +D+ +RRG+ T+ ++ A+ AG+ +
Sbjct: 58 FGTYDIERVKHVAVALELIHMASLVHDDV--IDDAELRRGRQTIKAKWSNRFAMYAGDYM 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E+++ + L I + ++ + Q + ++ K
Sbjct: 116 FARSLELMTRLENPLAHRILANTIVEVCRGEIEQIKDKYRFDQNLRCYLRR------IKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GAI A+A++ +RL FG +G+ FQ+ DD+LD
Sbjct: 170 KTALLIAASCQLGAIAANAAKRTADRLYLFGYYVGMSFQITDDILDFTGTEA 221
>gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9]
gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9]
Length = 322
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++ +D ++ L ++ Q + ++ A GGK++R L+ A
Sbjct: 6 FRQLITDDMLAVDQVIRRSLHSDVVLIR-QVAEYIIGA------GGKRLRPALLILAARA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A IECIH +L+HDD+ +D RRG+ T + + +++ G+ L
Sbjct: 59 LGCQGPAVHEQAAMIECIHTATLLHDDV--VDESDKRRGRDTANAMFGNAASVLVGDFLY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF+++ + I ++ + +Q + G + T+ + + K
Sbjct: 117 TRAFQMMVHTHSLRVLEIMAEATNIIAEGEVMQLLNIGNTDLTE------TEYLQVIQYK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L A GA++A A+ ++ L +G +LG FQ+ DD+LD D
Sbjct: 171 TAKLFEAAGRVGALLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGDAA 221
>gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 268
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
Query: 40 LSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP+MD+
Sbjct: 2 VEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDD 61
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG PT HI++ E AI+AG+ L T AF IIS P ++ D R ++ L + G+
Sbjct: 62 DLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGIA 121
Query: 158 GMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFG 214
GM GGQ L + + I + I + KTGAL+ A GA+ A +N L +
Sbjct: 122 GMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYA 181
Query: 215 ENLGIIFQLADDLLDCEED---LPKK 237
E++G+ FQ+ DD+LD D L K+
Sbjct: 182 ESIGLAFQVQDDILDVVGDTATLGKR 207
>gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
B728a]
gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
FF5]
gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
B728a]
gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7]
gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 322
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMKILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A Q + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
Length = 362
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ ++ + LD +L + L +A+RYA+ GG K++R L L + +
Sbjct: 74 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 128
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF
Sbjct: 129 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 188
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+S L + L+ + L +D T++ + +MKTGAL
Sbjct: 189 LALSEAPLPLDVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTGAL 248
Query: 189 MCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ A G + E + +GE LG+ +Q+ DD+LD L K
Sbjct: 249 IRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGK 303
>gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 349
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ L + ++ +L +TAS + L +A Y + GGK++R+ LV A L
Sbjct: 36 ADLLSDMAEVE---RQMLARTASR-----SPLLTAAGTYTVAAGGKRLRAALVLLSARLG 87
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ AL AIE +H SLIHDDL +D+ RRG TVH ++D A++ G+ L
Sbjct: 88 AYDPGRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVHTRWDADVALLLGDYLFA 145
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + + Q M+ G++ + T V +
Sbjct: 146 LAANELAAEPDP---------RIIAFYTSAAQTMVEGELNPVTHVEPLATAVEQYYRKIG 196
Query: 186 GAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AC++G +A + + + L FG +LG+ FQ+ DD+LD D L K
Sbjct: 197 RKTAVLFEAACKAGIAVAGGDEEQIDALGRFGYDLGLAFQIVDDVLDYTGDETALGK 253
>gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S]
gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S]
Length = 305
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + RL A+R+A + GGK++R LV + LFN++ +ALRVG A+ECI
Sbjct: 28 LFDRLLAVPDDPRRRLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECI 87
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H YSL+HDDLP+MD+ +RRGKPTVH +DE TAI+AG+ L AFEI++ +T +
Sbjct: 88 HVYSLVHDDLPAMDDDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFV 147
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
R +L+ +L G GM GGQM+D + D V +Q++KTGAL+ ++ AIMA
Sbjct: 148 RIELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMA 207
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ RL + ++G+ FQ+ADDLLD E D
Sbjct: 208 LIPPEGRMRLHGYARDIGLAFQIADDLLDVEGDA 241
>gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 291
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-LFNV 67
QE +++ L+D + Q L A+ Y++ GGK+IR FL+ E L V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLQVV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IRPAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
Length = 317
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 15/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ ++ID L + + +D+L +A ++ L GGK+IR +L L +
Sbjct: 5 KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLAVVTYMLKKDD 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AA+E IH Y+LIHDD+ D+ RRGKPTVH+ + E AI+AG+ L AF
Sbjct: 56 IEEVLPAAAAVELIHNYTLIHDDIMDHDDE--RRGKPTVHVVFGEPMAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S K K + +++ + ++ ++ + + + + KTGAL
Sbjct: 114 EAVSKIKDNKKAHEVLKILSKACVEV---CEGQAMDMEFENYYPTMDEYLEMIRKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GA+MA ++ E+ L+ + + +G+ FQ+ DD+LD D K
Sbjct: 171 LEASVEIGAVMADCNEEERNALKEYAKRIGLTFQIQDDVLDLIGDEKK 218
>gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
30120]
gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
30120]
Length = 323
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + E+ ++ + L + + Y + GG K+IR +
Sbjct: 1 MNLESIVELTAEDMSAVNEAILSQLNSDVALINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ ++V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILAGRSLGYSEHKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S+ + LQ M D I E
Sbjct: 111 VGDFIYTRSFQMMTDLDSMRVLKLMSEATNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + AI+A+A+ +++ L+ +G +G FQL DDLLD + D L
Sbjct: 165 QVIYSKTARLFEAASHASAILANATPEQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 313
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 20/251 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + L+ QT S + Q L A++Y+L GGK++R LV
Sbjct: 4 SSFSAIFHAYRVTFENFLN---SQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L +G+++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+
Sbjct: 61 FGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDE------ 174
L ++AF IS + +D + +L + G GM+ GQ+ D+Q E +
Sbjct: 121 ALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSK 180
Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLL 228
+ + ++ ++ ++ + + + ++ L +GE+LG++FQ+ DD+L
Sbjct: 181 SEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDIL 240
Query: 229 DCEE---DLPK 236
D E L K
Sbjct: 241 DVEGTQESLGK 251
>gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS]
gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS]
Length = 324
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
+ + +L++ +R T+L N + RY L GK+IR LV
Sbjct: 6 VTFSVTEELKQFQERYKTVLHS------------SNSLVDKVTRYVLRQQGKQIRPTLVI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + H R +E +H +LIHDD+ +D +RRG P+++ + +++
Sbjct: 54 LAAKVCGGVHDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVLI 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ K ++ S+ + ++ LQ + I E
Sbjct: 112 GDYLLSKGLLYSLENKDYRSLHLVSEAVRRMSEGEILQI------QKTRSLDITEEDYLS 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG+L+ +C GA + S++E L+ +GE LG+ FQ+ DDLLD D K
Sbjct: 166 VIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGEFLGLAFQIRDDLLDYTGDSKK 222
>gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 319
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 15/226 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ ++++ K+ID L + + ++ D + L GGK++R LV A L
Sbjct: 6 AFVKDDMKKIDDFLLSNIKTNSPTIKKAVEDLV-------LSGGKRVRPLLVIAIARLGE 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N + + A+IE +H +L+HDD+ +D+ +RRG+ +V +Y + TA+ G+ L +
Sbjct: 59 YNEDKIIPIAASIEIMHMATLVHDDI--IDDSKMRRGRESVQSKYGKETAVFTGDFLFSQ 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF +I+ ++ + ++ + ++ Q + + I + KT
Sbjct: 117 AFNVIADIISKENLKLIARGVKAICEGEIEQF------DNRYNLDISVLRYLKRIYRKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L +CESGA A S+ +R FG N+G+ FQ+ADD+LD E
Sbjct: 171 LLFAISCESGATQAGLSKELTRAMRRFGLNVGMAFQIADDILDYEG 216
>gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
Length = 290
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 85/220 (38%), Positives = 128/220 (58%), Gaps = 10/220 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+I+ L++ L ++AS + L A+RYA+ GGK++R L + + L
Sbjct: 13 QIEHTLENELAKSASVAE------LQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYL 66
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V +AIE IH YSLIHDDLP+MD+ +RRGKPT H + E TAI+AG+ L AFE ++
Sbjct: 67 KVASAIELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTD 126
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMC 190
L D R QL++++ G GM+ GQ+LDI+ + I KTGAL+
Sbjct: 127 LDQPLNDAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQAIHYHKTGALIA 186
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+A ++GAIMA+A+++ + L FG G+ FQ+ DD+ D
Sbjct: 187 YALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDY 226
>gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5]
Length = 324
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
+ +L + A +RL + I Y+L GGK++R L+ +F AL
Sbjct: 6 EQLLLAIENYLAQTEFPAEPERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPA 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E H ++L+HDD+ MDN +RRGKP+V+ ++ AI++G+ ++ A+ ++S
Sbjct: 66 AAAVEVFHNFTLLHDDI--MDNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVP 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192
+ T N + GQ D+ E + + + ++KT L+ +
Sbjct: 124 A------ELLPRILGTFNTMALEVCEGQQYDMDFESKRKVSVVEYMHMIELKTSVLLAGS 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
GA++ AS+ + +LR F LG+ FQL DDLLD D L K
Sbjct: 178 ITIGAMLGGASEEDCRKLRRFAIELGLAFQLQDDLLDSYGDDRLGK 223
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
L + RI++ +++ + L A++Y LLGGK+IR FLV
Sbjct: 3 DFQQNLCQVQHRINSFMENQFNDINTF-----GSPLADAMKYGLLLGGKRIRPFLVYATG 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + AAIE IH YSLIHDDLP+MDN +RRGKPT HI +D TAI+AG+
Sbjct: 58 DMLGADLNALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDA 117
Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T+AFEII+ + ++ LS + + L + + + ++ +I
Sbjct: 118 LQTFAFEIITKSTALCAEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIH 177
Query: 182 KMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTGAL+ A G I + A+ RL+ + + +G+ FQ+ DD+LD E
Sbjct: 178 RNKTGALLTAALMMGFICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEG 230
>gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase
[Gordonibacter pamelaeae 7-10-1-b]
Length = 349
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 9/240 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L + ++ T+++ + Q + + L + Y+ GGK+ R +
Sbjct: 16 ETFEEYLTRYAAQVGTLVNSYIPQGSH---PDMDRYLYEPLNAYSQNGGKRHRPLICFAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A AAIE H +LIHDD+ + +
Sbjct: 73 CRAVGGDMARATSAAAAIEHFHTAALIHDDIADEAELRRGEPCLHLTEGMGLAINMGDLA 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +I+ P +R L ++G + + +++
Sbjct: 133 LSLVNGT-VINDPLLDDATKVRVVNELIEMTRRTIEGQALDIGWARDGRYDITPEDYLVM 191
Query: 182 --KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GAI+ ++ E E LR +G + G+ FQ+ DDLL+ KK
Sbjct: 192 ATHKTAHYSGAVPLAIGAIIGGGTEAEIEALRNYGLDTGLAFQIQDDLLNLIGSEESTKK 251
>gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
Length = 313
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 84/254 (33%), Positives = 125/254 (49%), Gaps = 21/254 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + L+ QT S + Q L A++Y+L GGK++R L
Sbjct: 1 MNSSSFSKIFHSYKSTFENFLN---SQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLA 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L +GA++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+
Sbjct: 58 LAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAIL 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ L ++AF IS + + D+ + +L + G GM+ GQ+ D+Q E + +
Sbjct: 118 AGDALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKEN 177
Query: 178 FMI------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
++KTGAL+ A G + + + L +GE+LG++FQ+ D
Sbjct: 178 DSTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITD 237
Query: 226 DLLDCEE---DLPK 236
D+LD E L K
Sbjct: 238 DILDVEGTQESLGK 251
>gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 290
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LAFPFKAAALVTEQTITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
Length = 342
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++ I+ D + + Q L++A GGK++R L A
Sbjct: 22 DDLTALVAEDLSAVNQIILDRMQSQVEMIP-QLAGYLIAA------GGKRLRPVLTLAAA 74
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L + A +E IH +L+HDD+ +D +RRG + + + +++ G+
Sbjct: 75 NLCGYQGEHHRLLAAVVEFIHSATLLHDDV--VDESDLRRGMASANAVFGNKASVLVGDF 132
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFE++ ++ I S + LQ D E + K
Sbjct: 133 LFSRAFEMMVEVQSLDVLRILSGASAIIAEGEVLQL------RTTNDTETSEQAYLEVIK 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L AC GA++A+ Q E+ L +G NLGI FQL DD+LD K
Sbjct: 187 GKTAELFAAACRVGAVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSALQAK 240
>gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel]
gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel]
Length = 290
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 1 MNGGLPSKLQENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M + + ++++ + L+Q AS + L A+ Y + GK IRSF
Sbjct: 1 MTPFMRHSYSDIRQKVEDFSCLVRKELVQIASTKAECPSTVLYEALSYTISNPGKCIRSF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + A +F V+ LR+GAAIE +H YSL+HDDLPSMDN RRG+ + H ++ E A
Sbjct: 61 LASTSARVFGVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSPTRRGRESCHTKFGEAVA 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ LLT FE++S+ + +LS G GM+ GQ LDI+ +
Sbjct: 121 VLTGDALLTLTFELLSTMDEGCAVRCKIIELLSK--ACGRCGMVAGQALDIEAHSSTSFE 178
Query: 177 -VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V I ++KT L ACE+GA++ AS E+ L +G LG FQ DDL D ED
Sbjct: 179 GVRRIHELKTARLFSAACEAGAVLGGASTKERAALAEYGSALGCAFQAKDDLNDAGEDSE 238
>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
Length = 300
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
Q + LL A++Y LLGGK+ R FL + + AA+ECIH YSLIHD
Sbjct: 29 QPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHD 88
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLS 149
DLP+MD+ RRG+PT HI +DE AI+AG+ L T AF+I++S + + R ++
Sbjct: 89 DLPAMDDDAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSE 148
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQ-NE 206
L G GM GQ LD+ E Q+ +I + KTGAL+ A GA+ A
Sbjct: 149 LAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAI 208
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235
+L + E +G+ FQ+ DD+LD D
Sbjct: 209 LPQLDKYSEAIGLAFQVQDDILDVISDTE 237
>gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Microscilla marina ATCC 23134]
gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Microscilla marina ATCC 23134]
Length = 323
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+H L IRY + LGGK++R LV SLF+ NH A+ ++E H ++L+HDD+
Sbjct: 21 EHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMNAALSVEVFHNFTLVHDDI 80
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
MD +RRGKPT+H +++ T I++G+ +L A+E++ + + +
Sbjct: 81 --MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDIDSAHLKRVIGKFNRCAAE 138
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
Q + M + + E + ++KT L+ ++ E G I+A+A++ + L
Sbjct: 139 VCEGQQL---DMNFEHIDAVPEADYLNMIRLKTAVLLGYSLELGGIVANANKVAADLLNG 195
Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
FG N+G+ FQL DDLLD D K
Sbjct: 196 FGVNIGVGFQLMDDLLDVYADAAK 219
>gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 313
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 20/251 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + L+ QT S + Q L A++Y+L GGK++R LV
Sbjct: 4 SSFSAIFHSYRVTFENFLN---SQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L +G+++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+ G+
Sbjct: 61 FGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDE------ 174
L ++AF IS + +D + +L + G GM+ GQ+ D+Q E +
Sbjct: 121 ALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSK 180
Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLL 228
+ + ++ ++ ++ + + + ++ L +GE+LG++FQ+ DD+L
Sbjct: 181 SEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDIL 240
Query: 229 DCEE---DLPK 236
D E L K
Sbjct: 241 DVEGTQESLGK 251
>gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
Length = 344
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ ++ + LD +L + L +A+RYA+ GG K++R L L + +
Sbjct: 56 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 110
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF
Sbjct: 111 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 170
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+S L + L+ + L +D T++ + +MKTGAL
Sbjct: 171 LALSEAPLPLDVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTGAL 230
Query: 189 MCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ A G + E + +GE LG+ +Q+ DD+LD L K
Sbjct: 231 IRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGK 285
>gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
3043]
gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
3043]
Length = 337
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 44 RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
RY + GGK++R LV A N + + IE +H +L+HDD+ +D ++RR
Sbjct: 52 RYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTSTLLHDDV--VDESHLRR 109
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
GK T + + +++ G+ L + +F+++ + I S + LQ G
Sbjct: 110 GKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGSMRVMEILSGATCVIAEGEVLQLTNIG 169
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ + D + KT L A SGA++A A+ ++E L+ +G LG+ FQ
Sbjct: 170 NPDIDEAAYFDT------IQGKTAMLFEAASHSGAVLAEATPAQEEALKLYGRYLGLAFQ 223
Query: 223 LADDLLDCEEDL 234
L DDLLD + D
Sbjct: 224 LVDDLLDYQGDA 235
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
N L + I+ LD+ + +H + A+RY++L G K+ +
Sbjct: 33 NFDLRTYWTTLITEINQKLDE-------AIPVKHPAGIYEAMRYSVLAQGAKRASPVMCV 85
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
LF + L A A+E +H SLIHDDLP MD+ +RRGKP+ H Y A++A
Sbjct: 86 AACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLA 145
Query: 120 GNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ L F I S +++ + +G GM GQ +D++ +
Sbjct: 146 GDALFPLGFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPS-- 203
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+Q+ K GA+ + G ++ A+++E E LR +G +G+++Q DD+
Sbjct: 204 -FVQEKKFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDI 252
>gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
Length = 321
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 15/226 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++L I+ L + H + A GGK++R L A L
Sbjct: 4 LKARLALELPPINKALSRA-AEGLPHPVRPIARHIFEA------GGKRLRPLLTILMARL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + +E +H +L+HDD+ +DN RRGKP H ++ + I+AG+ +L
Sbjct: 57 LGYDKKDIYDLAVTMEMLHAATLLHDDV--LDNADTRRGKPAAHTIFNATSTILAGDAML 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+A +++ S+ L+ + I + K
Sbjct: 115 AHANALVAQCGDPRLCLCFSEATSRTAAGEILEI------AAQHQVETTAEEYEEIIRGK 168
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T L+ +C+ GA+ A A + E +GEN+G+ FQ+ DD LD
Sbjct: 169 TAWLIRASCQLGALRAGADEALVEAAAAYGENIGMAFQIVDDALDF 214
>gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 332
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L + ++ ++ D + + + L+ A GGK++R L A +
Sbjct: 14 LAAALSDEMDAVNVLITDRMASKHAPRIPEVTAHLVGA------GGKRLRPMLTLAAAKM 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYSGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+++ + +I + ++ LQ + + + I + K
Sbjct: 126 ARSFQLMVETGSLRVLDILANASATIAEGEVLQLTAASDLATTEAIY------LQIVRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL A E G ++A E L +G+ LGI FQ+ DDLLD
Sbjct: 180 TAALFSAAMEVGGVIAGQDAALVEALYDYGDALGIGFQIVDDLLDYAG 227
>gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Atcc 13032
gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Complexed With Calcium
And Isoprenyl Diphosphate
Length = 360
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ + +++ +L L + + GGK+ R
Sbjct: 33 DPELTARINDAMVQVEELLHTELSSGEDFLVDI-------VMHLTRAGGKRFRPMFALLA 85
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A + I + ++ MD +RRG P+ + ++D AI+AG+
Sbjct: 86 SEFGEKPLSENVIKAAVVVEITHLATLY-HDDVMDEASMRRGVPSANARWDNSVAILAGD 144
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T G + + +
Sbjct: 145 ILLAHASGLMSQLGTDTV--------AHFAETFGELVTGQMRETVGPRDTDPIEHYTNVI 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ DD++D + K
Sbjct: 197 REKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGK 254
>gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R]
gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 350
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ + +++ +L L + + GGK+ R
Sbjct: 31 DPELTARINDAMVQVEELLHTELSSGEDFLVDI-------VMHLTRAGGKRFRPMFALLA 83
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A + I + ++ MD +RRG P+ + ++D AI+AG+
Sbjct: 84 SEFGEKPLSENVIKAAVVVEITHLATLY-HDDVMDEASMRRGVPSANARWDNSVAILAGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T G + + +
Sbjct: 143 ILLAHASGLMSQLGTDTV--------AHFAETFGELVTGQMRETVGPRDTDPIEHYTNVI 194
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ DD++D + K
Sbjct: 195 REKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGK 252
>gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum
ATCC 13032]
gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium
glutamicum ATCC 13032]
Length = 350
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ + +++ +L L + + GGK+ R
Sbjct: 31 DPELTARINDAMVQVEELLHTELSSGEDFLVDI-------VMHLTRAGGKRFRPMFALLA 83
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A + I + ++ MD +RRG P+ + ++D AI+AG+
Sbjct: 84 SEFGEKPLSENVIKAAVVVEITHLATLY-HDDVMDEASMRRGVPSANARWDNSVAILAGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T G + + +
Sbjct: 143 ILLAHASGLMSQLGTDTV--------AHFAETFGELVTGQMRETVGPRDTDPIEHYTNVI 194
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTG L+ A GA+ A A+ + L+ FG +G+IFQ+ DD++D + K
Sbjct: 195 REKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSETHESGK 252
>gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2150]
gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2150]
Length = 287
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 16/236 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L + + + LD ++ + +A+ +A+ GGK++R FLV E ASL
Sbjct: 2 FQKRLSDAATLVQARLDAVIADFGDF-------PVAAAMAHAVTGGKRLRGFLVLEGASL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V AL AA+E +H YSL+HDDLP MD+ +RRG+PTVH+++D TA++AG+ L
Sbjct: 55 HGVAANDALNAAAAVEALHAYSLVHDDLPCMDDDDLRRGQPTVHVKWDYATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AF++++ T + + + L+ + G GM+ GQ +DI E + +
Sbjct: 115 TLAFDLLA--DTPVSADRQISLIKGMAVASGAAGMVLGQAMDIAAETAETPLDLNAITLL 172
Query: 185 TGA----LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ ++ E+G I+A + + LG+ FQ+ADD+LD E D K
Sbjct: 173 QANKTGALIRWSAEAGPILAGDDP---TPMCDYATALGLAFQIADDILDIEGDAAK 225
>gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
Length = 325
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
+++ L + A+ Q + L+ A GGK++R L A L + +
Sbjct: 17 KVNETLHSYMQSDAAPRIRQVSAHLIDA------GGKRLRPMLTVAAARLCGYDGPHHIH 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A +E IH +L+HDD+ +D+ RRG+PT ++ +D +++++ G+ L + AF++++
Sbjct: 71 LAATVEFIHTATLLHDDV--VDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTIT 128
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + ++ LQ +D I + KT AL A
Sbjct: 129 GSMPILAALADASATIAEGEVLQL------STARDLSATPETYIRIARGKTAALFSAATR 182
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A + + +G+ LGI FQ+ADDLLD
Sbjct: 183 VGAMLAEPGDAIVQAMHDYGDALGIAFQIADDLLDYTG 220
>gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
Length = 323
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 ATVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRGLS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEGELSPRHRRLAEITEMIHTASLVHDDVVDEAGTRRGVETVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ D KT
Sbjct: 122 QASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLF------RYDTGQTFETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ ++ + E L +G LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
Length = 293
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 125/234 (53%), Gaps = 8/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + E + I+ LD ++ + N +L +++Y+L GGK+IR LV
Sbjct: 2 LKKSMNELIEIINNNLDGIIKS------SPLNTKLEESMQYSLDAGGKRIRPVLVLLTLE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N N+ L+ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ L
Sbjct: 56 VLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDAL 115
Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LT +FE+I++ K + ++ L+ +D ++ I+ + I K
Sbjct: 116 LTKSFELIANDKNLDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIHK 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ F+ S A +A+ ++ L CF E+LG++FQ+ DDLLD D K
Sbjct: 176 AKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 229
>gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54]
gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 336
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 9/217 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ + + + ++ L + Y LL GGK+IR LV A L N L R+
Sbjct: 18 VNRYIAEDIALLRGSMEPLLCDILEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLATG 77
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
E +H +L HDD+ +D+ +RRG+ ++ ++ AI+AG+ L T A +
Sbjct: 78 FEYLHAATLFHDDI--IDHSDLRRGQESIAKKFGMEAAILAGDFLHTRAMIFVGEMVGAE 135
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ ++ LQ + Q+ I E + KTG L+ ACE GA+
Sbjct: 136 GLRRFGKATSAMVDGEFLQL------RNAQEYNISELDYYRAVMGKTGVLIAAACELGAL 189
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S+ E LR +GE LG FQ+ DDLLD + D
Sbjct: 190 YGGGSEAEIAALRSYGEKLGSAFQIVDDLLDYQGDTA 226
>gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 332
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDAVIRRRLASDVMLIN-QIADHIISA------GGKRLRPMLVILAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + A +++L +G LG FQ+ADD+LD +L K
Sbjct: 179 RKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGK 235
>gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct]
Length = 323
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D I+ L ++ D ++SA GGK++R LV
Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F
Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I SQ + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMRIISQATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A + A + + E LR FG+ LGI FQL DDLLD D L K
Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGK 225
>gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
Length = 296
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
++E + + +L QT RL+ A+RY+LLGG K+IR L ++
Sbjct: 1 MKERVSHFEWFAEKMLPQT-----GIGAKRLVGAMRYSLLGGGKRIRPLLCYAAGAVSGA 55
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
R A+E IH YSL+HDD+PSMDN +RRG+ T H++Y E A++AG+ L T A
Sbjct: 56 PEEVLDRAALALEMIHSYSLVHDDMPSMDNDTLRRGRATTHVRYGEAMAMLAGDALQTEA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++SSP + R L+ + L++ + ++ +Q MKTGA
Sbjct: 116 FTVLSSPSVPPEAAQRLVQTLARAAGVWGMCGGQALDLEMVGQKPGAAELSRMQAMKTGA 175
Query: 188 LMCFACESGA---IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ A GA I K L + + LG+ FQ+ DD+LDC +D L K
Sbjct: 176 MIMAAVLMGAQSGIWTALGDQAKAGLAAYADALGVAFQVVDDILDCTQDTMTLGK 230
>gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
Length = 349
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 9/240 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61
L + R+ +++ + + + L + Y+ GGK+ R +
Sbjct: 16 ESFEQYLTSYADRVGDLVNSFIPK---GTHADMDRYLYQPLMAYSQNGGKRHRPLICFAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A AAIE H +LIHDD+ +
Sbjct: 73 CRAVGGDMARATSAAAAIEHFHTAALIHDDIADEAELRRGEPCMHLTEGMGLAINAGDLA 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++S +R L ++G + + +++
Sbjct: 133 LSLVNGT-VVSDENLDDATKVRVITELIDMTRRTIEGQALDIGWARDGRYDITPEDYLVM 191
Query: 182 --KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GAI+ ++ E E LR +G + G+ FQ+ DDLL+ KK
Sbjct: 192 ATHKTAHYSGAVPLAIGAIIGGGTEVEVEALRNYGLDTGLAFQIQDDLLNLVGSEESTKK 251
>gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
Length = 323
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S + E + ++T L+ LL S + H +A GGK++R +V + +
Sbjct: 2 STVTELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH ++D A++AG+ L
Sbjct: 62 EQGELSPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTAQTF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ +C + +++ + + + L FG LG+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSCRAAGVLSGCAPTQLDSLYQFGRQLGLAFQVVDDILDFTGNDQQLGK 229
>gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
Geranyltranstransferase (farnesyldiphosphate synthase)
or Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 336
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L D + +A L GGK+ R LV
Sbjct: 13 DQALEADVQTGLAAVEAGLLDATKSDVPFITE-------AAQHLVLAGGKRFRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++ A++ G+
Sbjct: 66 AQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSIAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++ + +T I + Q+ +
Sbjct: 124 FLFARASHTLADLGPEAVRIQSEAFERLVTGQI-------LETAGPQEGRDPVDHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+MA A ++ + L +GE LG+ FQLADD+LD D
Sbjct: 177 GGKTGSLVAVSCRFGAMMAGADESVVDILTQYGERLGVAFQLADDVLDIASDS 229
>gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + I+ + +L + + + L GGK++R L A
Sbjct: 2 EALHTYFGLHRPAIEDHIQSVLGELDPLIVPVASHVLG-------AGGKRLRPILCVLTA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A+E +H +LIHDD+ +D +RRG+P+ H+ + ++AG+
Sbjct: 55 EAFGYRDKEVYPLATALELLHSATLIHDDI--LDGAALRRGQPSAHLAFGVQETVLAGDA 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A + I+ I S+ +++ + ++ + + F I
Sbjct: 113 LLAMANKCIAGYGQPELMRIASEAIMATANGEIMEIAQLREPRLSE------EDYFQIIT 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +CE GA++A A +++ + G NLGI FQL DD LD D K
Sbjct: 167 GKTAVLIQASCECGAVLAGAKGPQRQAAQDLGRNLGIAFQLVDDALDYTSAVEDSGK 223
>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
Length = 262
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 11/224 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
+++ ++I+ L+++L + + + L+ A++Y L GK+IR AS
Sbjct: 2 ERIETWKEKIEKRLNEIL-------KPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASAL 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N A+ VG+ IE IH YSLIHDDLP MDN RRG PT HI++ E A++AG+ LLT
Sbjct: 55 GGNEDDAITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLT 114
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
Y FE++S + + + +L + I + G + + ++ + KT
Sbjct: 115 YTFEVLSQRENYKTLSC--EEILEINKIIAQKAGSNGMVGGQVLDIKGYEDLYEVSVKKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
GAL GA++A + KE + G +G++FQ+ DD LD
Sbjct: 173 GALFEACFMCGAVVAKRREKLKE-MESIGRKVGLLFQMVDDYLD 215
>gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis I19]
Length = 339
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N L + R++ +L L + + L +A GGK+ R
Sbjct: 20 NPALNEDISAGMTRVEELLQKELCVGEDFI-VEKVKHLANA------GGKRFRPMFALLA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A + + + ++ MD RRG + + +++ AI+AG+
Sbjct: 73 SQYGDHPVSEDVIKAAVVVEMTHLATLY-HDDVMDEAAKRRGVESANARWNNSVAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + +++ T S+ L + + G+ I+ +
Sbjct: 132 ILLAHVSRLMADLGTDTV-RHFSETFGDLVTGQMRETIGVGEGDPIEHYMA-------VI 183
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + A+ + E LR +G +G++FQ+ DD++D D
Sbjct: 184 REKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSE 237
>gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis C231]
Length = 339
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N L + R++ +L L + + L +A GGK+ R
Sbjct: 20 NPALNEDISAGMTRVEELLQKELCVGEDFI-VEKVKHLANA------GGKRFRPMFALLA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A + + + ++ MD RRG + + +++ AI+AG+
Sbjct: 73 SQYGDHPVSEDVIKAAVVVEMTHLATLY-HDDVMDEAAKRRGVESANARWNNSVAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + +++ T S+ L + + G+ I+ +
Sbjct: 132 ILLAHVSRLMADLGTDTV-RHFSETFGDLVTGQMRETIGVGEGDPIEHYMA-------VI 183
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + A+ + E LR +G +G++FQ+ DD++D D
Sbjct: 184 REKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSE 237
>gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
Length = 280
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAA 78
+++ + + A+ Y+L+G GK++R L+ A + ++ A
Sbjct: 2 MNEFEAFLQRQCRLLKRSEVSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGA 61
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H YSLIHDDLP+MDN RRG+ T H Q++E TAI+AG+GLLT AF + ++
Sbjct: 62 LEMMHTYSLIHDDLPAMDNDDYRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSSDDP 121
Query: 139 KDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ L S G+ + + + Q+ + KTG L GA
Sbjct: 122 VKALKIVKELASAGGAEGMILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLVMGA 181
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I+A + R G +G+ FQ+ DD+LD
Sbjct: 182 ILAGQDAA-IPQWRRIGALMGLAFQIQDDILDVT 214
>gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2]
gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1]
gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D I+ L ++ D ++SA GGK++R LV
Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F
Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I SQ + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMRIISQATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A + A + + E LR FG+ LGI FQL DDLLD D L K
Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGK 225
>gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 319
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMKILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + AS+ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564]
gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564]
Length = 291
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E +V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LS ++ + + + ++ I KTG
Sbjct: 118 YVMIAQADLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 336
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L + S + L GGK++R LV
Sbjct: 13 DQALEADVQAGMAAVEAGLLEATKSEVSFITDAAQHLLK-------AGGKRLRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + G +E H +L HDD+ MD +RRG P+ + ++D A++ G+
Sbjct: 66 AQFGDPDAPGIVPSGVVVELTHLATLYHDDV--MDEAEVRRGVPSANARWDNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + +T I + +
Sbjct: 124 FLFARASHILADLGPEAVRVQAEAFERLVTGQIMETAGPRDGRDPVDHY-------LDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 177 GGKTGSLIAVAGRFGAMMSGADERVVDILTQYGERLGVAFQLADDVLDIASDS 229
>gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
Length = 345
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + +D ++ L T + +Q + ++SA GGK++R L+
Sbjct: 26 TATVLDLIAGDMVEVDRVIAQRL-DTGVPLVSQVSKYIISA------GGKRLRPALLLLM 78
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A +E IH +L+HDD+ +D +RRG+PT + + +++ G+
Sbjct: 79 SGALGYTGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANESFGNPASVLVGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AF+++ I ++ + LQ M D +DE+ +
Sbjct: 137 FLYSRAFQMMLDANNMRIMQILAEATNVIAEGEVLQLMNM------HDATLDESAYLRVI 190
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L + A++A A+ +E +G+ LG FQ+ DD+LD D K
Sbjct: 191 RSKTAKLFEASTRLAAVLAGATPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGK 248
>gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 5701]
gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 5701]
Length = 323
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK+IR +V + +
Sbjct: 2 ATVAELLQPVENDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PDGELSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFNNRLAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLAVVKLLSRVIMDLADGEVRQGLYRYDTGQSF------ETYLDKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ +++ + + E L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSAKASGVLSGLADDRLEDLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae OXC141]
Length = 291
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVGLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98]
gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9]
gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210]
gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ ++ + LD +L + L +A+RYA+ GG K++R L L + +
Sbjct: 34 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF
Sbjct: 89 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+S L + L+ + L +D T++ + +MKTGAL
Sbjct: 149 LALSEAPLPLDVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTGAL 208
Query: 189 MCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ A G + E + +GE LG+ +Q+ DD+LD L K
Sbjct: 209 IRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGK 263
>gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
Length = 298
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + + + + + + YALL GGK++R FL+
Sbjct: 1 MNSDFKVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N + ++ +E IH YSL+HDDLP++DN RRGK T H + E AI+
Sbjct: 55 TTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114
Query: 120 GNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ LLTYAF ++S + + ++ + G+ GM+GGQM+DI+ E
Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITNIISKTSAYSGINGMIGGQMIDIESENKKINLET 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E D
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 320
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 7/238 (2%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
G +L + ++T L DLL T + RL+ A+R+A+LGG K++R FL E
Sbjct: 17 TGDFTHRLAGVADTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + AL GA +E +HCYSL+HDDLP+MD+ +RRGKPTVH YDE TAI+ G
Sbjct: 77 TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ------MLDIQDEFIDE 174
+ L T AFE+ + P+ Q IR++L+L L GL GM+GGQ +D
Sbjct: 137 DALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPADMDI 196
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+Q MKTGA++ F+ E+GA++ A E+ L +G+ LG FQ+ADD+LD E
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRYGKALGQAFQVADDILDREA 254
>gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
Length = 291
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 293
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 5/226 (2%)
Query: 15 RIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+++ +++ + +Q+ L +++Y+L GGK+IR ++ + N ++
Sbjct: 5 QMNKLINIINTSLNKSIQSSPLKTNLEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQG 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LLT AFE++S
Sbjct: 65 LNSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVS 124
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMC 190
+ T +++ ++ L+ G GM+GGQ ++ + + I + I + KTGAL+
Sbjct: 125 NDTTIED-SVKVSIIKRLSKASGHLGMVGGQALDMESEGKSIRLETLESIHETKTGALLN 183
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F+ + +A QN + L F +LG++FQ+ DDLLD D K
Sbjct: 184 FSVMAAVDIAQVEQNIAKNLDEFSHHLGMMFQIKDDLLDVYGDESK 229
>gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
Length = 320
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L+E+ R++ + ++ L A + L GGK++R L CA
Sbjct: 7 DLREDLARVEEEIRRVVA--------GAPPPLREAALHLLAAGGKRLRPALALLCAHFGR 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ L + AA+E IH +L+HDD+ +D +RRG PTVH ++ TAI G+ L
Sbjct: 59 YSLERVLPLAAAVELIHMATLVHDDV--IDGAEMRRGIPTVHARWGPETAIKVGDVLFAQ 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A E++SS + + LS+ Q + + KT
Sbjct: 117 AIELVSSYEDSAVARKLAATCLSMCTGEFAQERESYSPQQSVWRYFRR------IRRKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ ACE GA + A + LR +G LG+ FQ+ DD+LD + L K
Sbjct: 171 LFIGAACELGARVCEAPLVVCQALRQYGLALGMAFQVVDDVLDLVAEERVLGK 223
>gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 299
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 13/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L L+ ++ ++T ++ + + + A+ YA+ GGK +R FLV E
Sbjct: 11 MADALKDALKHAAQIVETTIEAAVRPVETVVP--------DAMMYAVRGGKALRGFLVLE 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L V A + AIE +H YSLIHDDLP MD+ +RRGKPTVH ++D TA++ G
Sbjct: 63 GARLHGVEERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDVRRGKPTVHRKWDAATAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ L AFE+I S + + + ML++ + G + D + ++
Sbjct: 123 DALQALAFELIMSADIKPEAKVVLAHMLAIDAGERGMVGGQAADIAAETADAPLTLREIE 182
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+Q KTGAL+ +AC +G +A A + +R +G+ LG FQ+ADD+LD D
Sbjct: 183 SLQAKKTGALIEWACAAGPRIAGADE---MPMRHYGQALGRAFQIADDILDVTGDA 235
>gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
Length = 324
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 10/230 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
++E + + L+ + +++ N + +RY L GK++R LV A +
Sbjct: 2 DIKEVTVSVSQELETFRQRYKVALKS-DNSLIDKVMRYILKQQGKQVRPLLVMLGAKVCG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ R +E +H +L+HDD+ +D +RRG +++ + A++ G+ +L+
Sbjct: 61 GVADASYRAAIMVELLHSATLVHDDV--VDGAEMRRGLASINAVWKNKIAVLIGDYMLSK 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
K ++ S + ++ LQ + I E + KT
Sbjct: 119 GLLYSLDHKDYRSLHMVSDAVRRMSEGEILQI------QKTRSLDISEEDYLKVISDKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+L+ +C G + + E LR +GE LG+ FQ+ DDLLD D K
Sbjct: 173 SLLSTSCAMGGASVTDDEEKIEALRNYGEFLGLAFQIRDDLLDYTGDSNK 222
>gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 294
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 87/244 (35%), Positives = 127/244 (52%), Gaps = 17/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
MN S Q NS ++ L+ L + L+ A++Y+LL GK++R FLV
Sbjct: 1 MNEVFTSLKQRNSLELEKWLETL---------GHPDLSLVQAMKYSLLSEGKRVRPFLVY 51
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AAIECIH YSLIHDDLP+MD+ +RRG PT H+Q+DE TAI+A
Sbjct: 52 ATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAILA 111
Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
G+ L T AF I+S K + + R +++ L + G +GM GQ L+ + + + Q
Sbjct: 112 GDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLNQ 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ I KTG L+ A + GA+ + L + E +G+ FQ+ DD+LD D
Sbjct: 172 LEAIHVNKTGELIKAAVKLGALSCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSDTD 231
Query: 234 -LPK 236
L K
Sbjct: 232 TLGK 235
>gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ + + E++K +D ++ L + Y + GGK++R V
Sbjct: 1 MDLSRIRQPVAEDTKAVDALILRRLQSDVVLINQIG--------HYIVNSGGKRLRPLSV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A +E IH +L+HDD+ +D +RR + T ++ + +++
Sbjct: 53 LLAARACGYTGERHIDLAAIVEFIHTSTLLHDDV--VDGSELRRNRETANVVWGNDASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + +FE++ + + + LQ + + +
Sbjct: 111 VGDFLYSRSFEMMVDVGNMRVMEVLAHATNRIAEGEVLQLLNERDPDTDE------ARYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
+ KT L GA++A + +E +R +G LGI FQL DD LD +L
Sbjct: 165 EVISRKTATLFEAGTRLGAVIAESPPEIEEAIREYGLRLGIAFQLVDDALDYSVDNAELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMKILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + AS+ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ +D I+ L ++T D ++SA GGK++R LV C +
Sbjct: 10 VADDFSAVDGIIRKQLTSRVPLVETIG-DYIISA------GGKRLRPLLVLLCGNALGKC 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AAIE +H +L+HDD+ +D+ +RRG+ T + + +++ G+ L F
Sbjct: 63 DERMRLLAAAIEFLHTSTLLHDDV--VDDSELRRGRSTSNALWGNAPSVLVGDFLYARCF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I SQ + LQ ++D E + + KT L
Sbjct: 121 EMLVELASMPVMRIMSQATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A +A A+ + E LRCFG++LG+ FQL DDLLD D
Sbjct: 175 FEAASHGAASLAGATSEQAEALRCFGDSLGVAFQLVDDLLDYRGDAE 221
>gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 326
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 22/242 (9%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + + L+ I+ + L R+ Y GGK+IR LV
Sbjct: 1 MNIADVYALLKPQVAEIEQEIQSNLTSRVR--------RVQEVGEYIFQSGGKRIRPLLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ L + A+++G IE IH +L+HDD+ +D +RRG+ + + ++ I+
Sbjct: 53 LLTSKLCGGDERRAIKIGGIIEYIHTATLLHDDV--IDEACVRRGRDSANFKFGNEMVIL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AF+++ + S + ++ Q + F
Sbjct: 111 VGDYLYSKAFQVLVADGDPRVQKTLSDVTTLMSEGEVFQLVKSFDFSVTL------EDYF 164
Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
I + KT L+ + G A S+ + L FG N+G+ FQL DD+LD D L
Sbjct: 165 QIIEHKTAILIAACAKCGGYTAPDLSEEMADALWDFGYNIGMAFQLIDDILDYMGDASTL 224
Query: 235 PK 236
K
Sbjct: 225 GK 226
>gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
Max13]
gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
K40]
gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
T1]
gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 322
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMKILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + AS+ + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
Length = 287
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 13/237 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M LQ+ + I L+ ++ A+ L + +A+LGGK +R FLV E
Sbjct: 1 MAVQFTVALQQAQQEISARLNTIIPVGAT---------LGKPMLHAVLGGKMLRGFLVLE 51
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L V+ AL AIECIH YSL+HDDLP MD+ +RRG PT+H ++DE TA++ G
Sbjct: 52 SARLHGVDAEAALDAAVAIECIHAYSLVHDDLPCMDDDDLRRGLPTIHKKWDEATAVLTG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFM 179
+ L T AF++++ K +L+ G+ QG + + + Q+
Sbjct: 112 DALQTLAFDLLADSKFGPNALELIRLLARAAGRSGMVQGQMLDIDAETASTPLTLEQITR 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+Q KTG L+ ++ G ++A ++ L + LG+ FQ+ADD+LD E D K
Sbjct: 172 LQDRKTGCLINWSATVGPVIAG---DDSRALWQYATALGLAFQIADDILDIEGDAEK 225
>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
Length = 291
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 19/242 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L + + ++ L ++L + Q ND + + IR+A+L GGK++R+FLV
Sbjct: 3 NFNVQLNDTASIVEIALKEMLQK-------QGNDLMSAPIRHAVLNGGKRLRAFLVIHSC 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++F V TA++ AIEC+H YSL+HDDLP MD+ +RRGKPTVH+++DE TA + G+
Sbjct: 56 NIFEVQKDTAIQAAIAIECLHAYSLVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDA 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVF 178
L AFE+I+S I +L+ L G+QGM+ GQ DIQ + ++ +
Sbjct: 116 LQALAFELIASLPNTDAIRI-VELLKKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDIT 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+Q+ KTGAL+ ++ SGAI+++ +L + +++G+ FQ+ DD+LD E D
Sbjct: 175 SLQQNKTGALIEWSAISGAILSNHDD---RKLLDYAKSIGLAFQIQDDILDIEGDAVLAG 231
Query: 236 KK 237
K+
Sbjct: 232 KR 233
>gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
Length = 321
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L ++T + ++SA GGK+IR ++ +
Sbjct: 10 ISEDMSAVDKVIRSRLNSEVVLIRTIG-EYIISA------GGKRIRPAMLLMMSKALGYE 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE IH +L+HDD+ +D +RRG T + + +++ G+ L + +F
Sbjct: 63 GSLHHLMAAVIEFIHTSTLLHDDV--VDESDMRRGSATANAVFGNAASVLVGDYLYSRSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I S+ + LQ + ++ D +D + + K KT L
Sbjct: 121 EMMVEADSMRIMQIMSEATTVIAEGEVLQLL------NVHDPNVDFDRYMDVIKSKTAKL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A A++A A +++ +G ++G FQ+ DD+LD DL K
Sbjct: 175 FEAATRVAAVLAGADDAVEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGK 225
>gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA41317]
Length = 291
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L +
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 322
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN L ++ ++++ L + L A + + GGK++R V
Sbjct: 1 MNSLDLFRDIEPQLEKVEQELVRAITTEI--------SLLKEASVHLVKAGGKRLRPAFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
S ++ + + + A+E +H +L+HDD+ +DN + RRG+ TV + ++
Sbjct: 53 LLSGSFYSSSLDGLIPLAVALELVHMATLVHDDV--IDNSFTRRGQKTVKACWGNRVSLY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+GN +L + +I++ + +I + + + + +Q + +
Sbjct: 111 SGNYILAKSLSLIAAYERPDIIDILATVSMKVCEGEIIQMLSCFDVGQGY------KDYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT LM +C++GA++ A ++ LR FG LG+ FQ+ DD+LD
Sbjct: 165 RRIERKTALLMSLSCQTGALVGGAPADKVTVLRRFGYYLGMAFQITDDVLDFVASEE 221
>gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 332
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + +D ++ L + Q D ++SA GGK++R LV
Sbjct: 14 PQIQSLAAPDMAAVDALIRRRLASDVVLIN-QIADHIISA------GGKRLRPMLVMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 HAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I + + LQ + + + DE + +
Sbjct: 125 LYSRSFQLMVELDRMEVMQILADTTNRIAEGEVLQLLH------VHNPDTDEAAYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L GA+ + A +++L +G LG FQ+ADD+LD +L K
Sbjct: 179 RKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAAELGK 235
>gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
Length = 328
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ GL +L + R++ ++++ + + + L GGK+ R L
Sbjct: 8 VSAGLQERLTDGLARVEALIEERIDHDDPFIAEANVHLLR-------AGGKRFRPMLTIL 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + + AA+E H SL HDD+ MD +RRG PT + Y TAI+ G
Sbjct: 61 AAELGEGVNDAVVTAAAAVELTHLASLYHDDV--MDEADLRRGTPTANAAYGNSTAILIG 118
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L +A +++ + + T I +
Sbjct: 119 DLLFGHASALVAELGAEAVRIQAETFIRLCTGQIR-------DDRQAPAGEDSGAYYLRV 171
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KTG L+ A GA+ A + E +R +GE LG+ FQLADDL+D E +L K
Sbjct: 172 LEDKTGVLIATAARYGAMFAGCEDDVIETMRVYGERLGMAFQLADDLIDIESSAEELGK 230
>gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1]
gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1]
Length = 349
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 76/240 (31%), Gaps = 9/240 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61
L + + R+ +++ + + + L I Y+ GGK+ R +
Sbjct: 16 ESFEQYLTQYADRVGDLVNSFIPK---GTHADMDRYLYDPLISYSQNGGKRHRPLICFAA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A AAIE H +LIHDD+ +
Sbjct: 73 CRAVGGDMARATSAAAAIEHFHTAALIHDDIADEAELRRGEPCMHLTEGMGLAINAGDLA 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++S +R L ++G + + +++
Sbjct: 133 LSLVNGT-VVSDKSLDDATKVRVITELIDMTRRTIEGQALDIGWARDGRYDITPEDYLVM 191
Query: 182 --KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GAI+ ++ E E LR +G + G+ FQ+ DDLL+ KK
Sbjct: 192 ATHKTAHYSGAVPLAIGAIIGGGTEIEIEALRNYGLDTGLAFQIQDDLLNLVGSEESTKK 251
>gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
Length = 279
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 9/217 (4%)
Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHC 84
H + +L +A Y L GK++R+ LV E A++ + V AIE +H
Sbjct: 5 EPHSIPCPDPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHS 64
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
YSL+HDDLP+MDN +RRG+PTVH +DE TAI+ G+G AFEII+ + R
Sbjct: 65 YSLVHDDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIARDSSL-SAEQRV 123
Query: 145 QLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+L L+ +G +GM+GGQ + + + ++ + ++KTGAL+ A GAI+A A
Sbjct: 124 ELFALLSQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGA 183
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++ +RL F NLG+ FQ+ DD+LD DL K
Sbjct: 184 NRETLDRLATFAMNLGLAFQVIDDVLDVTACSDDLGK 220
>gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanohalophilus mahii DSM 5219]
gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanohalophilus mahii DSM 5219]
Length = 321
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
L +L++ S +D + + L H + L A RY GGK++R ++ A
Sbjct: 2 DLIDELKKRSTLVDESIQEFL-------PIDHPEELYRATRYLPDAGGKRLRPAVLMLSA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + L A+E IH ++LIHDD+ D+ G P +H+++ AI+AG+
Sbjct: 55 EAVGGDSDSVLPAAVALELIHNFTLIHDDIMDRDDIRR--GMPALHVKWGTAGAILAGDT 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFEIIS + ++ +LS T +G + +D + + +
Sbjct: 113 LYSRAFEIISKMDADPQKLLKCVALLSRTCTKICEGQWLDVDFEKRDIVDV-DEYLEMIE 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L A + GAI+ AS + + FG GI FQ+ DD++D
Sbjct: 172 NKTSVLYGAAAKVGAILGGASDEVADAMYEFGRLTGISFQIHDDVIDL 219
>gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
Length = 289
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
E +I+ + S++ +Q L+ +I Y++ GGK+IR + E FN+
Sbjct: 2 EKLTKINQTISHF--YQKSNLVSQD---LIDSIIYSVDSGGKRIRPLFLLESLEAFNITL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V AA+E +H SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F
Sbjct: 57 TEDHFKVAAALEMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQFDEATAILAGDSLFIDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + LS + +D+ + ++ I KTG L
Sbjct: 117 SLIAETNFLPQVKVDLIAQLSNAAGTFGMVGGQMLDMRAEDQKLGIEELQGIHSHKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + + AI+A + L GE +G FQ+ DD+LD DL K
Sbjct: 177 LAYPFMAAAIIAQLPADMISDLTRAGELIGHAFQVRDDILDITAKFEDLGK 227
>gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 332
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + L+ QT S + Q L A++Y+L GGK++R L
Sbjct: 22 SSSFSKIFHSYKSTFENFLN---SQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALA 78
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L +GA++ECIH YSLIHDDLPSMDN RRG PT+H ++ E TAI+AG
Sbjct: 79 AFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAG 138
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQV-- 177
+ L ++AF IS + + D+ + +L + G GM+ GQ+ D+Q E + +
Sbjct: 139 DALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDL 198
Query: 178 ------FMIQKMKTGALMCFACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDL 227
+ ++ +S ++ + + + ++ L +GE+LG++FQ+ DD+
Sbjct: 199 TNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDI 258
Query: 228 LDCEE---DLPK 236
LD E L K
Sbjct: 259 LDVEGTQESLGK 270
>gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1873-00]
gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC3059-06]
gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669]
gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae JJA]
gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1873-00]
gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC3059-06]
gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC
700669]
gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae JJA]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ +I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQIIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4]
gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4]
Length = 344
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 15/238 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + L+ ++ +L L + A+ GGK+ R +
Sbjct: 21 DADLAAALRGRLDEVEKLLVSRLESGEDFLSEV-------ALHLVTAGGKRFRPIVTLLA 73
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ V AA+ C + MD +RRG + + ++D TAI+AG+
Sbjct: 74 GEI-GPEPDHERLVKAAVVCEMIHLATLYHDDVMDEASMRRGVESANSRWDNSTAILAGD 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++ +++ + + + Q + +
Sbjct: 133 FLFAHSSMLLADLGPAAVQ----LIAQTFAELVTGQMRETVGPGVGGRDEDAAQHYLRVI 188
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ A + G + A+ + RLR FG+ +GI FQ+ADD++D + K
Sbjct: 189 WEKTGSLIAAAAQFGGEYSGATGEQIARLRRFGDAVGIAFQIADDIIDIASPSAESGK 246
>gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified
eubacterium SCB49]
gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified
eubacterium SCB49]
Length = 324
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ L Y L LGGK++R L A F A+ A+E H +
Sbjct: 15 LEQAIPVNEPIGLYGPAAYILELGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNF 74
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SLIHDD+ MD+ +RRGK TVH ++D T I++G+ +I + +
Sbjct: 75 SLIHDDI--MDDAPLRRGKVTVHEKWDLNTGILSGD------AMLILAYQLFEGYEAEKF 126
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHA 202
L+ + + GQ D+ E D+ + + KT L+ A + GAI+A A
Sbjct: 127 QQLAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEA 186
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S K+ + FG NLGI FQL DD LD D
Sbjct: 187 SDACKDNIYEFGRNLGIAFQLQDDYLDAFGDPE 219
>gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae
TIGR4]
gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae MLV-016]
gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Taiwan19F-14]
gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae MLV-016]
gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Taiwan19F-14]
gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200]
gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
AP200]
gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA04375]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L +
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae 70585]
gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae 70585]
gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA17545]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L +
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6]
gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39]
gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Hungary19A-6]
gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae P1031]
gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6]
gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39]
gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae Hungary19A-6]
gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae P1031]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 337
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +Q + ++ L + + + T L+ A GGK+ R LV
Sbjct: 13 DRDLTRDVQAGMEAVEAALIEAVKSDVPFI-TVTASHLIEA------GGKRFRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG P+ + ++D AI+ G+
Sbjct: 66 AQFGDPTAPGVVPSAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWDNSVAILTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A +++S T+ +T I + + E +
Sbjct: 124 FLFSRASQVLSDLGTEAVRIQSDAFERLVTGQI-------LETAGPRPEDDPLRHYLDVI 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG+L+ AC G++MA A + + L +GE +G FQLADD+LD D K
Sbjct: 177 SGKTGSLIAVACRFGSLMAGAERWIVDLLTQYGERIGTAFQLADDVLDIASDGHESGK 234
>gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
Length = 322
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D I+ L ++ D ++SA GGK++R LV
Sbjct: 10 VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L +F
Sbjct: 63 GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I SQ + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMRIISQATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A + A + + E LR FG+ LGI FQL DDLLD D L K
Sbjct: 175 FEASTHSAAALCRAGEEQAEALRRFGDYLGIAFQLVDDLLDYRGDAATLGK 225
>gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium
eBACmed86H08]
Length = 287
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 85/233 (36%), Positives = 136/233 (58%), Gaps = 11/233 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ K+ + K I+ L + L + L++++ Y L GGKKIRS ++ +
Sbjct: 1 MEKKINKIGKDINKFLKNFLKKQKR-------TELITSMNYGLFPGGKKIRSKIIIDVGK 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F+V + +RVGAA+ECIH YSLIHDDLP MDN +RRGK + H ++ E TA++AGN L
Sbjct: 54 IFSVPYHHLIRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQ 181
LT AFEI+S ++ + +++L+ SL++ G G+ GGQ LD+ E + ++ +Q
Sbjct: 114 LTLAFEILSEKNFKINETKKNKLINSLSNTSGHLGIAGGQYLDLNFEKKRVSKKKIIDMQ 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG L F+ + I+A+ S + + G ++G++FQ+ DD LD
Sbjct: 174 LNKTGKLFSFSTIAPLIIANKSAK-INQFKRIGLDIGLLFQIVDDFLDYSGSE 225
>gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
marginale str. St. Maries]
gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Florida]
gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
marginale str. St. Maries]
gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Florida]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ K+++ + + L ++ + A L A+ Y + GK IRSFL +
Sbjct: 11 SDIQQKVEDFASLVQKELAQVVHEKAECPSAA----LHEALGYVISNPGKCIRSFLASTS 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A +F V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN
Sbjct: 67 AQVFGVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGN 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMI 180
LLT FE++S+ +LS G GM+ GQMLD++ + V I
Sbjct: 127 ALLTLTFELLSTMNEGCAVRCEIIELLSK--ACGRCGMIAGQMLDMEAHSSTSFEGVRRI 184
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++KT L ACE+GA++ AS E+ L +G LG FQ DDL D ED
Sbjct: 185 HELKTARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 237
>gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
11568]
Length = 367
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 16/230 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ +D ++ + + + L+SA GGK++R L A
Sbjct: 52 KDDMAAVDALIIARMQSDVPVIP-LLAEHLVSA------GGKRLRPLLTVAAARAIGQTG 104
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A ++ +D +RRGK H+ + ++++ G+ L AFE
Sbjct: 105 AIDGPKKLAASVEFIHTATLLHDDIVDGSEMRRGKVAAHLIWGSASSVLVGDFLFARAFE 164
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ D +D I + KT L
Sbjct: 165 LMVETDSLRALGILARASAVIAEGEVLQL------TRAHDLNLDLDTYLQIIRAKTAELF 218
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A ESGA+ A A+ + LR +G LGI FQLADD LD E L K
Sbjct: 219 AAAAESGAVGAGATDEQVAALRDYGMALGIAFQLADDALDYGGATETLGK 268
>gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae INV104]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMG 18311]
gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus CNRZ1066]
gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMG 18311]
gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus CNRZ1066]
Length = 290
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
K+ID + D + + + L+ AI Y++ GGK+IR + + F +
Sbjct: 3 KLKKIDAAIRDFYQKKTPPVSSD----LIIAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ V A++E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F
Sbjct: 59 PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + ++ LS + + +D +Q+ I + KTG L+
Sbjct: 119 LVAQTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
F + I+A E L+ G +G+ FQ+ DD+LD D
Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224
>gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L++ + Q L A+ Y++ GGK+IR FL+ E +V
Sbjct: 4 QEKLALVESALENF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLHVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IRPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YSLIAQADLPSQIKVNLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 323
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLEQITTLTAQDMAAVNNVILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S +I+A A+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
Length = 290
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L+E ++ID L+ + L S++ Y++ GGK++R L +F
Sbjct: 3 ELKELKEQIDQFLEQQMPS------DIDQPTLASSMEYSVNAGGKRLRPALTLTTVQIFG 56
Query: 67 VNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ AIE +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT
Sbjct: 57 GQLNQNVMKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLT 116
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+ ++ + + L L+ + ++ + + + Q+ + + KT
Sbjct: 117 MAFQWLTDNQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLHRQKT 176
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G L+ +A +G I+ K L FG G+ FQ+ DDL+D
Sbjct: 177 GDLLSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVG 223
>gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
SP9-BS68]
gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae SP195]
gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
SP9-BS68]
gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae SP195]
gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA17570]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE ++++L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESVLEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIASLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5]
gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5]
Length = 337
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M+ + +L E +D +++ LL+ AS A+ Y + GGK++R L
Sbjct: 1 MSARVLERLGEIGALVDPVMEKYLLRGAS-------PEFQDAVLYQVRMGGKRVRPALTI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
AL AA+E H YSLI DD+ +D+ +RRGKPTV +Y TAI+
Sbjct: 54 ASTLAVGGKEENALPAAAAVELAHNYSLILDDI--IDHSELRRGKPTVWKKYGISTAILI 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--------LGGQMLDIQDEF 171
E ++ + + L + + +++ +
Sbjct: 112 AVHYRESITEALNDTPEPPVFHAIMAETIKLLTDGERLDILFEQSGRSDEPYVVEQRYRA 171
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + KT L+ +C GA+ A E LR +G NLG+ FQ+ DD++D
Sbjct: 172 VRLDDYLRMIERKTAKLIETSCVFGALSAGQRGEILEALREYGYNLGMAFQVGDDIIDIF 231
Query: 232 EDLPK 236
+ K
Sbjct: 232 GEEEK 236
>gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688]
gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688]
Length = 295
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ + R++ +LDD+L RL A+RYA+LGG K++R+ L
Sbjct: 2 DFNAWSLDIQTRMERVLDDILPA-----ANIIPSRLHGAMRYAVLGGGKRVRALLAHAAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AA+E IH YSL+HDD+P MD+ +RRGKP+ H QYD+ TA++ G+
Sbjct: 57 EFCQAPISAVEQSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
L AF++++ P + ++ L G +GM GGQ +D+ + +T++ +
Sbjct: 117 LQALAFKVLAEPGLLRDAARQMHMVHILAVASGSRGMAGGQAIDLASVGLDLTQTELEQM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL+ A GA A + + + + + +G+ FQ+ DD+LD E D L K
Sbjct: 177 HIHKTGALIRAAALLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEADTTTLGK 236
>gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
Length = 320
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L++ ++D ++D + L GGK++R ++ A
Sbjct: 2 ELIEYLEKVGNQVDRLIDRYFGDPVGELNKASAHLL-------TAGGKRLRPAVMMLAAD 54
Query: 64 L-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+E H ++LIHDD+ MD +RRG PTV+ ++DE TAI+AG+
Sbjct: 55 AVRKGSSDDLMPAAIALELTHSFTLIHDDI--MDGDEVRRGVPTVNKKWDEPTAILAGDV 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF I +R+ ML++T G + +D+ + + +
Sbjct: 113 LYARAFAFICQALAMDAAKLRAVSMLAVTCEEICAGQHLDMAFEDRDDVSE-EEYLEMVG 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTGAL + G ++A SQ + + L +G N+G+ FQ+ DDL+D
Sbjct: 172 KKTGALYAASTAMGGVLAGGSQPQVDALYRYGMNIGVAFQIQDDLIDL 219
>gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
Length = 291
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1]
gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase) [Halobacterium salinarum R1]
gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1]
gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Halobacterium salinarum R1]
Length = 347
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 25/248 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL- 64
+ ++E ++++ +DD L +RL A RY L GGK++R ++ A
Sbjct: 12 AAVRERRQQVNDAIDDDL-------PVAEPERLYEASRYILEAGGKRLRPAVLLLTAEAL 64
Query: 65 ---FNVNHLTALRVGAAIECIHCY---------SLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ S MD+ +RRG P VH +YD
Sbjct: 65 ADTSDTPPYREFPDCIGGHVDVMSAAVSIEVIQSFTLIHDDIMDDDDLRRGSPAVHREYD 124
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
TAI+AG+ L + AFEI+ + +R+ L+ T +G + +
Sbjct: 125 TETAILAGDTLYSKAFEIMLETGAPPERGLRAMRTLAETCTHICEGQAMDIDFET-RGDV 183
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE- 231
+ + ++KT L A ++ A + E L +G +G FQ+ DD+LD
Sbjct: 184 VTDEYLEMVELKTAVLYAAAATLPGLLLSADEETVEALYNYGLRVGQAFQIQDDVLDLTV 243
Query: 232 --EDLPKK 237
+L K+
Sbjct: 244 PSAELGKQ 251
>gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 322
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ I L ++ LQ +Q+ + Y L GGK+IR LV A L
Sbjct: 1 MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLAARLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ + + +E IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 DGSRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + + + LQ + + + + + KT
Sbjct: 118 FSLMVTDGDLGILKVLADATTMIAEGEVLQLVCTSDLDITV------ERYIEVVRSKTAI 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ ACE GAI+ A ++ + +G +LGI FQL DD LD
Sbjct: 172 LLSAACEVGAILGGAEPGLRQAVADYGMDLGIAFQLMDDTLDYTASQE 219
>gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
Length = 323
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + ++T L+ LL + + H +A GGK+IR +V + +
Sbjct: 6 ELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAADGE 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
R E ++ +D RRG TVH ++D A++AG+ L A
Sbjct: 66 LTQRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + S++++ L QG+ + + +++ KT +L+
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTSQSFETYFEKSYC------KTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +++ + + + L FG LG+ FQ+ DD+LD L K
Sbjct: 180 ANSSRAAGVLSECNPQQLDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
Length = 291
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVV 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
coahuilensis m4-4]
Length = 320
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 20/234 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
S L ++ I+ L + ++ L A + L GGK+IR V
Sbjct: 8 SFLHQDINIIEEELQQAISSSSQ--------TLNEASLHLLQAGGKRIRPVFVLLGGKFG 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N V ++E IH SL+ DD+ +D+ IRRG PTV Q+D A+ G+ +
Sbjct: 60 EYNIDVVKNVAVSLELIHMASLVLDDV--IDDAEIRRGIPTVKSQWDNKVAMYTGDYIFA 117
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + + + I S ++ + Q D K KT
Sbjct: 118 RSLDYMLNIPNPEAHKILSDAIVEVCKGEIAQI------KDKYLFEQSLRDYLRRIKRKT 171
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ +C+ GAI++ A + ERL FG +G+ FQ+ DD+LD +L K
Sbjct: 172 ALLIAVSCQLGAIVSGAPREVHERLYRFGYYVGMSFQIIDDILDFTATADELGK 225
>gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +LQE +D L L L ++ Y+LL GGK++R L A
Sbjct: 1 MARQLQELVAVVDDYLATHLA------GACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAE 54
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L +R A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+G
Sbjct: 55 LLGKTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AFE +S + + +R L+ + + + Q+ + +
Sbjct: 115 LLTLAFEWVSDNQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHR 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KTGAL+ +A +G ++A + L FGE G+ FQ+ DD+LD ++ K
Sbjct: 175 QKTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTATTAEMGK 231
>gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396]
gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396]
gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
Length = 290
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
++ID + D + + + L++AI Y++ GGK+IR + + F +
Sbjct: 3 KREKIDAAIRDYYQKKNLPVSSD----LITAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ V A++E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L F
Sbjct: 59 PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + ++ LS + +D +D +Q+ I + KTG L+
Sbjct: 119 LVAQTELSAEIRVQLIQALSYASGTFGMVGGQMLDMKGEDLELDLSQLAKIHENKTGKLL 178
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
F + I++ E L+ G +G+ FQ+ DD+LD D
Sbjct: 179 TFPFVAAGIVSQQEDRVMENLKEAGRLIGLAFQVRDDILDVTADFE 224
>gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
Length = 291
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E ++ID + D + + +D L+ +I Y++ GGK+IR L+ E F +
Sbjct: 4 EEKIRQIDQTIIDY------YSKKAVSDSLVESILYSVQAGGKRIRPLLLLELVEAFGLP 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LQSAHFQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + + + LS ++ + +D ++ I KTG
Sbjct: 118 YGLIAVAELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELQAIHAHKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ F + ++ + + +LR GE +G+ FQ+ DD+LD +L K
Sbjct: 178 LLAFPFVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDVTASFEELGK 229
>gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 336
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLAAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++ A++ G
Sbjct: 65 AARFGDPYAPGLVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSANARWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + D +
Sbjct: 123 DFLFARASHILADLGPEAVRVQAEAFERLVTGQI-------LETAGPMDGRDPVEHYLEV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTGAL+ AC GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LSGKTGALVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / decaprenyl diphosphate synthase
[Syntrophus aciditrophicus SB]
gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / decaprenyl diphosphate synthase
[Syntrophus aciditrophicus SB]
Length = 324
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
KR++ ++ L + + L S GGK+ R L+ A LF
Sbjct: 14 LKRVEEEMEFHLRSEVAIIPEIVTHLLGS-------GGKRFRPLLLLISADLFGYQGRRC 66
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH SL HDD+ +D RRGK + + + ++ G+ L + A+++++
Sbjct: 67 HTLSAVLEFIHTASLFHDDV--IDKAESRRGKVSANNIWGNAAVVLVGDFLYSKAYQLMA 124
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ S ++ Q + G++ + I + KT L+ A
Sbjct: 125 EDGSMEIMHLISTTSNVMSEGEVFQLIKCGEVNLTE------EDYLKIIEKKTAILISAA 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
C G + A ++ E L+ FG LG FQ+ DD LD EED K
Sbjct: 179 CALGGYLGGAEVHQIEALKQFGLRLGSAFQMTDDTLDYVAREEDFGK 225
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
L++ +RI L L + + L +A+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTALAAFS------IPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125
Query: 127 AFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFEI++ + + L M+ GQ L + + +D+T++ I
Sbjct: 126 AFEILASRLFDEQGQGTDAAIVLKQVQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185
Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ A +LR FG+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITASTE 240
>gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Mississippi]
gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Puerto Rico]
gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
[Anaplasma marginale str. Virginia]
Length = 286
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 124/233 (53%), Gaps = 8/233 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ K+++ + + L ++ + A L A+ Y + GK IRSFL +
Sbjct: 6 SDIQQKVEDFASLVQKELAQVVHEKAECPSAA----LHEALGYVISNPGKCIRSFLASTS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A +F V+ LR+ AAIE +H YSL+HDDLPSMDN IRRGK + HI++ E A++ GN
Sbjct: 62 AQVFGVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGN 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMI 180
LLT FE++S+ +LS G GM+ GQMLD++ + V I
Sbjct: 122 ALLTLTFELLSTMNEGCAVRCEIIELLSK--ACGRCGMIAGQMLDMEAHSSTSFEGVRRI 179
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++KT L ACE+GA++ AS E+ L +G LG FQ DDL D ED
Sbjct: 180 HELKTARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 232
>gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
Length = 323
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + ++T L+ LL + + H +A GGK+IR +V + +
Sbjct: 6 ELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAADGE 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
R E ++ +D RRG TVH ++D A++AG+ L A
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + S++++ L QG+ + + +++ KT +L+
Sbjct: 126 HLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTSQSFETYFEKSYC------KTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +++ + E + L FG LG+ FQ+ DD+LD L K
Sbjct: 180 ANSSRAAGVLSECNPQELDSLYQFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
Length = 271
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 35 HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ + L A++YA++ GGK+IR L+ LF + + A+E IHCYSL+HDDLP
Sbjct: 7 YPEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHDDLP 66
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
+MDN RRGK T H++Y E TAI+ G+ LLT AF +I+ + + LS
Sbjct: 67 AMDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKTDDTAKAKIIAKLSEYA 126
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ + + + I KTG L+ A E I ++++E+L
Sbjct: 127 GFYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKREKLVG 186
Query: 213 FGENLGIIFQLADDLLDCEE---DLPKK 237
+ E +G FQ+ DD+LD E + K+
Sbjct: 187 YSELIGTAFQIKDDILDIEGKFEETGKQ 214
>gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
Length = 332
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +Q + + +D ++ L ++T + + S GGK++R +V A
Sbjct: 13 ESLRQLVQNDIEAVDALIVKELSSHVPLIETITHHIIQS-------GGKRLRPLVVLLTA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + +D RRG+ T + + +++ G+
Sbjct: 66 RACGYEQDVEHQELATVIEFIHTATLL-HDDVVDKSTQRRGQKTANALWGNSASVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+I++ I + ++ Q M + D IDE + + +
Sbjct: 125 LYSRAFQILARRSNVPIMKILATTTNQISEGEVWQLM------NQNDPDIDEVTYYEVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D
Sbjct: 179 RKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDAS 231
>gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15]
gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15]
Length = 322
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L + + ++ K ++ L ++ L S GGK+IR L+
Sbjct: 1 MHSAL-ALVGDDLKNVEAQFKKDLESDVYLIRKVGEYVLAS-------GGKRIRPTLLLL 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + + + IE IH +L+HDD+ +DN +RRG + + + +++ G
Sbjct: 53 AAKLCGYTGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASANEVWGNEASVLVG 110
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + +F ++ + S + LQ + + + + +
Sbjct: 111 DFLFSKSFSLMVQAGDLRVLKVISDATTIIAEGEVLQLLCTSDLD------MTLERYIEV 164
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K KT L+ ACE+GAI+ A+ ++ LR FG +LGI FQL DD LD
Sbjct: 165 VKSKTAVLLSAACEAGAILGKATPEQELALRDFGMDLGIAFQLMDDTLDYTASEE 219
>gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
NaphS2]
gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
NaphS2]
Length = 325
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57
M G +P + + + +RI+ L+ + + YALLG GK++R +
Sbjct: 1 MTGEIPTLALFEAHFERINRELNKVFDSRVPLAK--------EIGTYALLGEGKRLRPLI 52
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L + E IH SL+HDD+ +DN IRR KP+ + + A+
Sbjct: 53 FVLSCQLCGYGGEDLYPLSTVFEYIHTSSLLHDDV--LDNAEIRRRKPSSNQIWGNQAAV 110
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L + A I S + + ++ + ++ L+ + + +
Sbjct: 111 LEGDFLFSKALSIAVSANSVPFISSLTKATMRMSEGQILELVHTDDLETGR------DTY 164
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L+ AC GAI++ +S + L FG ++GI FQL DDLLD
Sbjct: 165 MQIINAKTAVLISAACGCGAIVSGSSPEIEASLTRFGRSVGIAFQLVDDLLDYTSSEE 222
>gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1087-00]
gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC0288-04]
gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC1087-00]
gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CDC0288-04]
Length = 291
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
3043]
gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
3043]
Length = 285
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ R + +L ++ + A + L +A+RY++LGG K++R LV
Sbjct: 1 MTTARARTEQVLAGIVERAAP-----VSGELDAAMRYSVLGGGKRLRPILVYAAGHALGA 55
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AA+E IH YSL+HDDLP+MD+ +RRG+PTVH Y E AI+AG+ L T A
Sbjct: 56 EDKALDAPAAAVELIHAYSLVHDDLPAMDDDDMRRGRPTVHRAYSEAMAILAGDALQTLA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE+++ + + L + G +D + KTGA
Sbjct: 116 FEVLAETRHPRLGAMVRALANASGREGMAAGQALDLSAVGGRLDVDALAT--MHGYKTGA 173
Query: 188 LMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ A GA +A A +++ L + +G+ FQ+ DD+LD D L K
Sbjct: 174 LIRAAVRLGA-LAAADEDDPRVAALDTYAAAIGLAFQIQDDILDVAGDAATLGK 226
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
Length = 303
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQAIGLAFQVQDDILDITSSTE 240
>gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 336
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L D + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLAAVEAGLLDATKSEVPF--------ITEAAQHLVSAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 ASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYMD-------V 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+MA A ++ + L +GE LGI FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSGRFGALMAGADESVVDILTQYGERLGIAFQLADDVLDIASDS 229
>gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
Length = 324
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 18/238 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
MN + S + E K +L N + RY L GK+IR LV
Sbjct: 1 MNINEVTSSVAEELKLFQERYKTVLHS--------SNTLVDKVTRYVLRQQGKQIRPTLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + R +E +H +LIHDD+ +D +RRG P+++ + +++
Sbjct: 53 ILGAKVCGGVGDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL+ ++ S+ + ++ LQ + I E
Sbjct: 111 IGDYLLSKGLLYSLENSDYRSLHLVSEAVRRMSEGEILQI------QKTRSLDITEEDYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KTG+L+ +C GA A S+ E RL+ +GE LG+ FQ+ DDLLD D K
Sbjct: 165 SVIADKTGSLIATSCAIGAASATDSEEEIARLKHYGEFLGLAFQIRDDLLDYTGDSKK 222
>gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
Length = 312
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ A+RYA+ GGK +R+FLV E A L V A AIE +H YSL+HDD+P MD+
Sbjct: 54 VAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDD 113
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGL 156
+RRG+PTVH+++DE TA++AG+ L T AFE++++ + + L+ +
Sbjct: 114 ALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDAERVALVTGLARAAGVRGMV 173
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
G + + + Q+ +Q KTGAL+ +A +G +MA ++ LR + N
Sbjct: 174 GGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAG---DDAAALRSYARN 230
Query: 217 LGIIFQLADDLLDCEEDLP 235
LG+ FQ+ADD+LD E D
Sbjct: 231 LGLAFQIADDILDVEGDAA 249
>gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase
gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius]
gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
Length = 330
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECAS 63
+ E ++ I+ + + +L A GGK++R ++T +
Sbjct: 4 FDNYFNEIVNSVNDIIKSYI--------SGDVPKLYEASYHLFTSGGKRLRPLILTISSD 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF A GAAIE +H ++L+HDD+ MD IRRG PTVH++Y AI+AG+ L
Sbjct: 56 LFGGQRERAYYAGAAIEVLHTFTLVHDDI--MDQDNIRRGLPTVHVKYGLPLAILAGDLL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQK 182
AF++++ L + T +I + ++ +D + + +
Sbjct: 114 HAKAFQLLTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL + GA++A A+ N+ + FG NLGI FQ+ DD+L D L K
Sbjct: 174 RKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGK 230
>gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 334
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 8/231 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + ++ + I+ L + A +A GGK++R L C
Sbjct: 6 NEQYHAAMRVLAAYIEQQLPAINDFLARETDKLDPLVRPAAAHVLAAGGKRLRPVLAILC 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + ++E +H +L+HDD+ +D +RRGK HI + A++AG+
Sbjct: 66 ARALGHKGEAIYPLACSLEFLHSATLLHDDI--LDGAVLRRGKAAAHIVFSRTEAVLAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A ++++S S+ ++ + + +M I
Sbjct: 124 VLLALANQLVASYGDPRLTTCLSEAIMRTVAGEVAEIVNTREMDSSL------ETYLHII 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ +C GA++A S + FG N+GI FQ+ DD +D
Sbjct: 178 TGKTAYLLEASCVVGALLAGVSDELIKAASVFGLNMGIAFQIVDDAMDYTS 228
>gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
Length = 331
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
++++ ++ + L + ++ Y GG K++R L+ A F+
Sbjct: 20 IRDDLAGVEVAIRRAL--------DGPDPHIVELATYLQRGGGKRLRPALLLLTARNFHY 71
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L V AA+E IH +L+HDD+ +D RRG PTV++++ TA++ G+ L A
Sbjct: 72 DRERLLPVAAAVELIHMATLVHDDI--VDGATSRRGLPTVNVRWGTGTAVLTGDFLFARA 129
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++++ + ++ + ++ Q ++ + KT
Sbjct: 130 FSLLAADGDNRVVRVMAEAVYEMSTGEIEQQAQLFDPAAGEEGYYRR------IYKKTAH 183
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ C G +M A + + E LR +G +G+ FQ+ DD+LD + L K
Sbjct: 184 FISHCCLMGGLMGGAPERQVEALRRYGYGIGMGFQVIDDILDLTGNPEQLGK 235
>gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum
brasilense]
Length = 338
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + ++ ++ I+ + + + Q L++A GGK++R L A
Sbjct: 18 DDLTALVADDLSAVNEIIVQRMHSSVDMIP-QLAGYLIAA------GGKRLRPVLTLAAA 70
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A +E IH +L+HDD+ +D +RRG + + + +++ G+
Sbjct: 71 ELCGYKGEDHKMLAAVVEFIHTATLLHDDV--VDESDLRRGLASANAVFGNKASVLVGDF 128
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ + I S+ + LQ D E + K
Sbjct: 129 LFSRSFELMVEVGSLDVLRILSKASAVIAEGEVLQL------RTTNDTETSEQAYLEVIK 182
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L AC GA++A Q E+ L +G NLGI FQL DD+LD K
Sbjct: 183 AKTAELFAAACRVGAVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAK 236
>gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
Length = 353
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 7/236 (2%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
L ++ + +++D + + +D L + + Y+ GGK+ R +
Sbjct: 20 ETFEEYLSSYAQVVGDLVNDFIPSGSH---DGMDDYLYAPLLGYSRNGGKRHRPLICLAA 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A+ AAIE H +LIHDD+ + +
Sbjct: 77 CVAVGGDVRRAVSSAAAIEHFHTAALIHDDIADEATLRRGEPCLHLTQGLGLAINMGDLG 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++ P + +R L ++G + + + +++
Sbjct: 137 LSLVNGT-VVRDPLLEDGVKVRVIAELIEMTRRTIEGQALDLGWARDERYDITPEDYLVM 195
Query: 182 --KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+ S+ E E LR +G + G+ FQ+ DDLL+ E D
Sbjct: 196 ATHKTAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDTGLAFQIQDDLLNIEGDPA 251
>gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
rimae ATCC 49626]
gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
rimae ATCC 49626]
Length = 365
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 76/247 (30%), Gaps = 15/247 (6%)
Query: 4 GLPSKLQENSKRIDTILD-------------DLLLQTASHMQTQHNDRLLSAIR-YALLG 49
L R++ LD + + + N L +R ++ G
Sbjct: 2 DFIDYLTSVRPRVEKELDAGLPIPVSQKHLQEAEPAACNSVVADLNTYLYQPLRGFSATG 61
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK++R LV + + AL V AIE +LIHDD+ +
Sbjct: 62 GKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDIADKSELRRGEPCLYRRL 121
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + T + + ++S+ + L
Sbjct: 122 GTGLAINVGDAALVHTIGRICHGNTYDEATRLRLIDALISMQEHTLEGQALDLGWTQENR 181
Query: 170 EFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
I + + + GAI+ + ++ L+ FG G+ FQL DDLL
Sbjct: 182 WDITPDEYLFMATSKTAYYSAAYPLLCGAIVGGGTAEQRSALKAFGLKAGLAFQLQDDLL 241
Query: 229 DCEEDLP 235
+ D
Sbjct: 242 NLVGDAK 248
>gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus]
Length = 360
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 18/247 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E + ++ +L + + Q + + + + + + L GGK+IR+ L
Sbjct: 10 AYLEEVRQPVNAVLREFIEQQQNSIPPDVDIGPAVRALGDFVLHGGKRIRAALCYWGWRG 69
Query: 65 FNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII--- 118
+ +A R AA+E HC+ LIHDD+ R + A
Sbjct: 70 AGGGDEDLTSAYRAAAALEVCHCFGLIHDDIIDGTATRRGRPSLHCQLASLHEQAGWHGD 129
Query: 119 ----------AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
L + + + + + + +L S + G + ++
Sbjct: 130 AAAFGRSSALLMGDLCLFWADELLTTACSEERLVEVRLEYSGMRVAEVCGQMLEMIVQAS 189
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+F + + + + G +A +S ++ FG LG FQL DD+L
Sbjct: 190 RDFDVSSGMTVAHYKTAKYATERPLQIGGRLAGSSAELRKSYAAFGLPLGEAFQLRDDIL 249
Query: 229 DCEEDLP 235
D
Sbjct: 250 GVFGDPA 256
>gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278]
gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
Length = 316
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 6/234 (2%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
++L RI + + + T L + + +A L GGK+ R LV
Sbjct: 10 TAAFETQLDRWRGRIGEAVAEAMA-----FGTTVPAPLQAGMSHAVLAGGKRYRGMLVLA 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
S V L AIE IH SL+ DDLP MD+ RR +P H+ + E TAI++
Sbjct: 65 LGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPCMDDARRRRSQPATHVAFGEATAILSS 124
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L+ A E+++ + + S + G + E +
Sbjct: 125 IALIARAMEVVARDRQLSPASRSSIVDTLSHAIGPQALCGGQYDDLYPPYYATEQDLIHR 184
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT AL A A++A R+ G+ LG+ FQ+ DDLLD D
Sbjct: 185 YQRKTSALFVAAFRCPALLAEVDPETLLRIARAGQRLGVAFQIFDDLLDLTGDA 238
>gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 308
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 9/235 (3%)
Query: 1 MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L
Sbjct: 13 MNKQLLTEFESKWRPQINQYLDEQLQACS------DQSTLTDAMRYSVLAGGKRLRPLLT 66
Query: 59 TECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
F++ A + +E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI
Sbjct: 67 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 126
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L FE I+ L L+ + + + +
Sbjct: 127 LAGDALQPLTFEWIADSGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALPAL 186
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD
Sbjct: 187 QQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 241
>gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
Length = 280
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 17/232 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
L R++ L+ L L A+RY+ L GK++R+ L+ A F++
Sbjct: 3 LNNYRDRVEHALERALPH--------DESLLTKAMRYSTLNAGKRLRAALIYAVAEDFSL 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A+ECIH YSLIHDDLP+MDN +RRGK + H +DE TAI+AG+ L T A
Sbjct: 55 PLSLVDNAACALECIHAYSLIHDDLPAMDNDDLRRGKASCHKAFDEATAILAGDALNTLA 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +++ + + L+ G + ID ++ +I + KTGA
Sbjct: 115 FALLAR-----DEKNGLAQIRCLSAAAGAMVCGQSLDMIYTGTAIDVQKLQIIHQKKTGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ A GA+ + + + +L GE++GI +Q+ DD+LD D L K
Sbjct: 170 LLTAALHLGALPSPDYAHYQTQLTAIGEHIGIAYQIIDDMLDATSDSQTLGK 221
>gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 349
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 21/244 (8%)
Query: 2 NGGLPSKLQENSKRID--TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
+P+ L + +R D + D+ Q + ++ L +A Y + GGK++R+ LV
Sbjct: 22 TRTMPTGLGDILRRADLLNDMADVERQMLARTISRAP-LLTAAGTYTVAAGGKRLRAALV 80
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
CA L + AL AIE +H SLIHDDL +D+ RRG TVH ++D A++
Sbjct: 81 LLCARLGMYDPSRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVHSRWDADVALL 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ A +++ + + Q M+ G++ + V
Sbjct: 139 LGDYFFALAANELAAEPDP---------RIIAFYTSAAQTMVEGELNPVTQIEPLAIAVE 189
Query: 179 MIQKMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ AC++G +A + E L FG +LG+ FQ+ DD+LD D
Sbjct: 190 QYYRKIGCKTAVLFEAACKAGIAVAGGDDAQIETLGRFGYDLGLAFQIVDDVLDYTGDET 249
Query: 234 -LPK 236
L K
Sbjct: 250 ALGK 253
>gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
Length = 297
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ +I+ +++ + AIR GGK++R ++ E + +
Sbjct: 4 KDSLSKIEKLIESFFYNEDELNKNVIKAS-NEAIR---NGGKRLRPLIMFETYKAISGDE 59
Query: 70 LTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + IE IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L
Sbjct: 60 YSEEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSVQ 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN----IGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
AFEIIS + D + M + G GM+GGQ +D++ T+ M
Sbjct: 120 AFEIISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKYT 179
Query: 183 M--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + G I+A AS+ E L+ G +G FQ+ DD LD D
Sbjct: 180 YALKTGALLAASFVVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVADEK 234
>gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 296
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 9/235 (3%)
Query: 1 MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L
Sbjct: 1 MNKQLLTEFESKWRPQINQYLDEQLQACS------DQSTLTDAMRYSVLAGGKRLRPLLT 54
Query: 59 TECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
F++ A + +E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI
Sbjct: 55 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L FE I+ L L+ + + + +
Sbjct: 115 LAGDALQPLTFEWIADSGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALPAL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD
Sbjct: 175 QQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 229
>gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 263
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 125/212 (58%), Gaps = 9/212 (4%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE
Sbjct: 10 LIVEVNRLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT ++ +
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLT-----LAFEVLSSLNE 124
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
R +++ L+ IG++GM+GGQ LDI +F + I MKT L +CE GAI+ +
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDIGADFNKIKE---IHLMKTAKLFAASCEIGAIIGN 181
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A +++ L +G NLG+IFQ DD+ D E+D
Sbjct: 182 AIDKQRKALYNYGINLGLIFQAKDDIEDYEQD 213
>gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
Length = 332
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +Q + + +D ++ L ++T + + S GGK++R +V A
Sbjct: 13 ESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQS-------GGKRLRPLVVLLTA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + +D RRG+ T + + +++ G+
Sbjct: 66 RACGYEQDVEHQELATVIEFIHTATLL-HDDVVDKSTQRRGQKTANALWGNSASVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+I++ I + ++ Q M + D IDE + + +
Sbjct: 125 LYSRAFQILARRSNVPIMKILATTTNQISEGEVWQLM------NQNDPDIDEVTYYEVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D
Sbjct: 179 RKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDAS 231
>gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 295
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 11/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+ S +++D+ L L Q N RL A+++ L+GGK+IR +L+ A
Sbjct: 2 TINSLTAATREQVDSFLKQALAQL------TLNPRLNQAMQHGVLMGGKRIRPYLLVTVA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N AL+ AA+E IH YSLIHDDLP+MD+ +RRG+PT HI YDE TAI+AG+
Sbjct: 56 DICGANKNDALQAAAAVELIHAYSLIHDDLPAMDDDDLRRGQPTCHIAYDEATAILAGDA 115
Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
L T AFE+++ + QL + QL+ L G +GM GQ +D+Q T+
Sbjct: 116 LQTLAFEVLTENRMEQLPSERQLQLVQVLAKASGARGMCAGQAIDLQATAKIVTEDALEQ 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A G + + + + +E+ F LG+ FQ+ DD+LD +
Sbjct: 176 MHLSKTGALITAAATMGVLCGNDNAQQWREKFEQFAHYLGLAFQVQDDILDVTGNTE 232
>gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668]
gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668]
Length = 322
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ ++ + LD +L + L +A+RYA+ GG K++R L L + +
Sbjct: 34 KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V A IE IH +SLI DDLP+MDN +R G+ T+H QYD TA++A +GL++ AF
Sbjct: 89 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+S L + L+ + L +D T++ + +MKTGAL
Sbjct: 149 LALSEAPLPLDVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTGAL 208
Query: 189 MCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ A G + E + +GE LG+ +Q+ DD+LD L K
Sbjct: 209 IRAAVRMGVLCGTVPGVELGAAWRAVSEYGERLGLAYQVVDDILDSTAATSVLGK 263
>gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300]
gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300]
Length = 291
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD +
Sbjct: 178 LLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTANFE 225
>gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
NAS-14.1]
gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
NAS-14.1]
Length = 301
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ A+RYA+ GGK +R+FLV E A L V A AIE +H YSL+HDD+P MD+
Sbjct: 43 VAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDD 102
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGL 156
+RRG+PTVH+++DE TA++AG+ L T AFE++++ + + L+ +
Sbjct: 103 ALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAATGCGDAERVALVTGLARAAGVRGMV 162
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
G + + + Q+ +Q KTGAL+ +A +G +MA ++ LR + N
Sbjct: 163 GGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMAG---DDAAALRSYARN 219
Query: 217 LGIIFQLADDLLDCEEDLP 235
LG+ FQ+ADD+LD E D
Sbjct: 220 LGLAFQIADDILDVEGDAA 238
>gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 327
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 20/234 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+ + ++ + +D ++ L + RY + GGK++R L+ +
Sbjct: 13 ALIADDMQEVDKVIASRLQSAV--------PLVGEVARYIISAGGKRLRPALLLLMSGAL 64
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T
Sbjct: 65 GYTGSQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANENFGNPASVLVGDFLYT 122
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ + I ++ + Q M + D + E+ + + KT
Sbjct: 123 RAFQMMVETSSLRVMEILAEATNVIAEGEVQQLM------NTHDASLSESGYLNVIRSKT 176
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L + A++A + + +G+ LG FQ+ DD+LD + ++ K
Sbjct: 177 AKLFEASARLAAVLAASPPEIEHACASYGQALGTAFQVIDDVLDYDGNAHEMGK 230
>gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
Length = 291
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVV 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQAIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 307
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L
Sbjct: 4 MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57
Query: 60 ECASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
FN ++ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A +
Sbjct: 58 ATLITFNQTITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GL AF+ + + L L+ ++ + + ++
Sbjct: 118 AGDGLQALAFQWVVDNDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHELQ 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D
Sbjct: 178 KLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234
>gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
Length = 337
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 18/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S QE K++D + L + A GGK++R L +
Sbjct: 17 EEIKSAYQEQLKKVDDHIKLKLSSHVELVGEM-------ATHLMSTGGKRLRPLLTICSS 69
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+FN + + A +E IH +L+HDD+ +D RRG T + + ++I+AG+
Sbjct: 70 EIFNYKGNRHINLAACVELIHNATLLHDDV--IDKSESRRGFKTTNAIWGNKSSILAGDY 127
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL+ FE++ +Q I S + + +Q Q+ ++ + I
Sbjct: 128 LLSRCFEMMVDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMVEKNY------LDIIS 181
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KT +L + G + S EKE L +G NLGI FQ+ DD+LD KK
Sbjct: 182 AKTASLFGASMRVGGCINDRSNKEKEALESYGRNLGICFQITDDILDYSSKEQVFGKK 239
>gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
Length = 346
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
++ + I + L + A + ++H + GK++R LV C
Sbjct: 26 RIADFLAPIASELAEAERIFAQELGSRHPFVQQLVDHCSAFRGKRLRPALVLLCGQAVGR 85
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D +RR T++ ++ TA++ G+ L T+A
Sbjct: 86 LTPDHPVLAAVVEMIHTATLVHDDI--LDESLVRRHAATINAEWGNETAVLLGDYLFTHA 143
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F + +S ++ L + + Q D +DE+ I + KT
Sbjct: 144 FHLAASLESTLACRWIGRATNLVCEGEMNQV------HHRGDLDLDESTYLDIIQGKTAE 197
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L+ +C+ GA A A ERL FG +LG FQ+ADD+LD +
Sbjct: 198 LIAVSCKLGAHYAGADVETTERLERFGRDLGSAFQIADDVLDLWGEE 244
>gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
Length = 288
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L +++ I D +L + A+ YA GGK++R FLV E A L
Sbjct: 2 FSERLAQDAALIQAQFDLVLGALDDV-------DVTRAMAYATQGGKRLRGFLVLESARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ IE +H YSL+HDDLP MD+ +RRG+PTVH Q++E A++AG+ L
Sbjct: 55 HGMDETCAIWPATGIEALHAYSLVHDDLPCMDDDDLRRGRPTVHKQWNEGIAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
AFE+ + IR+ L L+L G +GM+ GQ LDI E + + +
Sbjct: 115 ALAFELCA-RPEVGPAEIRADLALTLAQAAGARGMVLGQALDIAAETAQQPLSLEDITRL 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
Q KTGAL+ ++ +GA +A + R+R + LG+ FQ+ADD+LD E D+ K
Sbjct: 174 QAGKTGALIEWSGCAGARLAGENPE---RMRLYSRALGLAFQIADDILDVEGDVQK 226
>gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 322
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMRILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A + + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
Length = 303
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQAIGLAFQVQDDILDITSSTE 240
>gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CCRI 1974]
gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Streptococcus pneumoniae CCRI 1974M2]
gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
Length = 291
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPKMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
Length = 351
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA--- 62
+++ + ++ +++ + +RL A RY L GGK++R ++ A
Sbjct: 15 QTVEQRRELVNAAIEE-------ELPIVEPERLYEASRYLLDAGGKRLRPTVLLLVADAL 67
Query: 63 -----------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
++ + AA+ S MD+ +RRG P+VH Y
Sbjct: 68 ADVEPMSEAYRKFPALDGTELDVMAAAVSIEVIQSFTLIHDDIMDDDDLRRGVPSVHRAY 127
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
D TAI+AG+ L + AFEI+ + + +L+ T +G + + +
Sbjct: 128 DTETAILAGDTLYSKAFEIMLETDATPDRCVTALDVLASTCTRICEGQALDVAFEERPDV 187
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + + KT L A + A++ A + E L +G ++G FQ+ DD+LD
Sbjct: 188 LP-DEYLEMIENKTAVLYGAAAKVPAVLLGADEETTEALYRYGIDVGRAFQIQDDVLDLT 246
Query: 232 --ED-LPKK 237
D L K+
Sbjct: 247 VPSDKLGKQ 255
>gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
Length = 336
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L + LQ+ R+D +L ++ + + L A GGK+ R L
Sbjct: 16 TPELMAHLQDGLARVDALLRTVVDHEDPFIAA-ASSHLAQA------GGKRFRPLLTLLS 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L +R A +E H SL HDD+ MD +RRG P+ + YD TAI+ G+
Sbjct: 69 AELGEGVTDDVVRAAAGVELTHLASLYHDDV--MDEAEVRRGVPSANAVYDNSTAILVGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A E+I+ + + + I + +
Sbjct: 127 LLFGKASELIAGLGAEAVLIQAQTFVRLCSGQIR-------DDRPCPPDVDPIDYYLGVL 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L AC GA+ + S E +R +GE +G+ FQLADDL+D D
Sbjct: 180 ADKTGSLTATACRYGAMFSGGSPELVETMRSYGEKVGMTFQLADDLIDIASDSE 233
>gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 322
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMRILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A + + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
Length = 296
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 9/235 (3%)
Query: 1 MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
MN L ++ + + +I+ LD+ L + L A+RY+ L GGK++R L
Sbjct: 1 MNKQLLTEFESKWRPQINQYLDEQLQACS------DQSTLTDAMRYSVLAGGKRLRPLLT 54
Query: 59 TECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
F++ A + +E +H YSLIHDDLP+MDN +RRG+PT H+++ E AI
Sbjct: 55 LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L FE I+ L L+ + + + +
Sbjct: 115 LAGDALQPLTFEWIADSGLPASIVANQTLALAQATGPRGMVAGQVADVLGAGQHLALPAL 174
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KTGAL+ +A ++G I A +E L + + G+ FQ+ DD+LD
Sbjct: 175 QQLHREKTGALIHYAVQAGLIQAQVQPTVQELLLQYADAYGLAFQIYDDILDVTS 229
>gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901]
Length = 291
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
GA41301]
Length = 291
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
Length = 329
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ + +D I+ + + + + + L++A GGK+IR LV A
Sbjct: 20 DLEAVDRIIRQQMHSDIA-LVGRIAEYLINA------GGKRIRPVLVLLMAKALGYQGKQ 72
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ A IE IH +L+HDD+ +D +RRG P+ + + ++++ G+ L T AF+++
Sbjct: 73 HQTLAATIEFIHTATLLHDDV--VDESELRRGIPSANALFGNASSVLVGDFLYTRAFQMM 130
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + ++ + +Q M +D ++ + KT L
Sbjct: 131 VSVGNMRILEVLAEATNLIAEGEVMQLMNARNAAIDEDGYMK------VIYAKTAKLFEA 184
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++AH S+ + FG +G+ FQL DD+LD D
Sbjct: 185 SSVLGALVAHVSEEKIGAAARFGRAVGMAFQLIDDMLDYAGDTG 228
>gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 325
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 20 LDDLLLQ-TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L + + S + Q + IRY L L GK++R L A LF + + A
Sbjct: 7 LSRYVQEALTSAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAA 66
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+ MD +RRG+ TVH ++++ AI++G+GLL A+E ++ +
Sbjct: 67 LAIEYFHNFSLI-HDDIMDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKE 125
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + T Q + Q + + ++KT L+ A GA
Sbjct: 126 NLLDLLTTFNKVATEVCEGQQLDMDFESLDQVTE---DEYLHMIRLKTSVLLGGALRMGA 182
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+A AS ++E + FG N+GI FQL DD+LD D
Sbjct: 183 IIAQASLEQQEFIYDFGVNVGIAFQLQDDILDVYGDPE 220
>gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 322
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 18/232 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ + + + ++ ++ + + L + + Y + GGK++R LV
Sbjct: 1 MDLDQIRALVADDMNAVNDRIRERLQSSVVLINQLG--------HYIINSGGKRLRPLLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 53 LLSARACGAGDRRHIDLAAIIEFIHTATLLHDDV--VDASELRRGRETANALFGNEASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + +FE++ + I + ++ LQ + D E +
Sbjct: 111 VGDFLYSRSFEMMVEIGSMRVMEILAHTTNTIAEGEVLQLLNC------HDADTPEERYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + KT L A GA++ ++ ++ + +G +LG FQL DD+LD
Sbjct: 165 EVIQSKTAKLFEAAARIGAVLGGQPESVEQAMAAYGMHLGTAFQLIDDVLDY 216
>gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 323
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLEQITALTAQDMAAVNNVILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S +I+A A+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
Length = 349
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++E +R++ + + + Q +RL A RY L GGK++R ++ A
Sbjct: 13 EAVRERRERVNEAIPE-------ELPIQRPERLYEASRYLLDAGGKRLRPTVLLTVAESL 65
Query: 66 ----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
N N + + ++E I ++LI MD+ +RRG P VH
Sbjct: 66 LDVEPLSTDYREFPTLNGNRIDIMDAAVSVEVIQSFTLI--HDDIMDDDDLRRGVPAVHK 123
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+YD TAI+AG+ L + AFEI+ + ++ + +L+ T +G + +
Sbjct: 124 EYDLETAILAGDTLYSKAFEIMLETGAKPDRSVEALNVLATTCTKICEGQSLDVTFEERA 183
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + KT L + AI+ A + + L +G ++G FQ+ DD+LD
Sbjct: 184 DVSP-EEYLEMVEQKTAVLYAASACLPAILLGADEETIDALYGYGLDIGRAFQIQDDVLD 242
Query: 230 CE 231
Sbjct: 243 LT 244
>gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 318
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 20/231 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
++++ ++ L +L + T+ + L A GGK++R L A +N +
Sbjct: 8 VRDDLDIVERELYAVLKSNNQLL-TESSSHLFRA------GGKRLRPALALLSAKFYNYD 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L + A+E +H +L+HDD+ +D +RRG PTV ++ ++ G+ LL A
Sbjct: 61 LQKVLPLAMALELVHLATLVHDDV--VDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAM 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++S ++ + + + + + +Q D K KT L
Sbjct: 119 ILVSVYRSPVIIGVLAHSCVKMCEGEIIQF--------AGLNQCDLRDYLRRIKYKTALL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ AC+ GA+ A + + L FG LG+ FQ+ DD+LD D L K
Sbjct: 171 IQAACQLGAVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVADQKRLGK 221
>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
Length = 303
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQAIGLAFQVQDDILDITSSTE 240
>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
Length = 288
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/235 (37%), Positives = 125/235 (53%), Gaps = 14/235 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L + +ID +L + L + RL A+RY++L GGK+IR L+
Sbjct: 3 YLNKY--KIDEMLXNYLAKETGEC-----TRLQEAMRYSVLQGGKRIRPILMRLAYEAVG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
AIE +H YSLIHDDLP+MDN +RRG PT H+++DE TAI+AG+GLLT
Sbjct: 56 GTGN-IAPYMCAIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTL 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
AFEI+ D ++ L G GM+ GQM D+ + I + IQ K
Sbjct: 115 AFEIMLQDLVSDMDPAKAIAANILATGAGASGMVLGQMYDMFYEGKEISIEMLEKIQLNK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
TGAL+ A + GA++ + S++E L +G LG +FQ+ DD+LD +L K
Sbjct: 175 TGALIKSALKMGAVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGK 229
>gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori
str. 301020]
Length = 322
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMRILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A + + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides
T2-87]
Length = 282
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 6/221 (2%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ + + R A+ Y+L+ GGK++R L+ + ++ AI
Sbjct: 5 NEFETYLKETVLEKLPSRTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPKDGFACACAI 64
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG-LLTYAFEIISSPKTQL 138
E IH YSLIHDDLP+MDN RRGKP+ H YDE AI+AG+G L ++ +P +
Sbjct: 65 EMIHTYSLIHDDLPAMDNDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEVVLRTPCSDT 124
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + S + G+ + D + I + KT L+ AI
Sbjct: 125 NKVKLVEALSSYSGIDGMIYGQELDIQSENDPHATLDTLLKIDEYKTAKLLTLPLVCAAI 184
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+A+ + E ++ G +LG+ FQ+ DD+LD E+L K
Sbjct: 185 IANK-HEDIEIMKKIGYDLGVQFQIQDDILDVTKTSEELGK 224
>gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus]
Length = 357
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 14/238 (5%)
Query: 10 QENSKRIDTILDD---LLLQTASHMQTQHND--------RLLSAIRYAL-LGGKKIRSFL 57
+E S ID +L + + HM + ++ + + YAL GK IR +
Sbjct: 15 EEASVSIDAVLKEMHGYVANARRHMTSAFDELAESWQTSPVRDVVHYALDEPGKMIRPTI 74
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ RV A IE H SL+HDDL +D RR P+V + +A+
Sbjct: 75 TLAACQAVGGDPEMFGRVAAGIEYGHLASLMHDDL--IDEDATRRRIPSVWNAFGVPSAV 132
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
IAG+ LL AF ++ + + I + +M + I
Sbjct: 133 IAGDLLLFTAFHALACQQGVPAERIVRTFEAVTRSGVDACFGTSLEMALAGNISISTETY 192
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGA++ E GA++ S + LR +GE+LG+ FQ+ DD+L E D
Sbjct: 193 LKMAAGKTGAVLRGCSEGGAVIGGGSPRQIASLRDYGEDLGVAFQIIDDVLPYESDEE 250
>gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54]
gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54]
Length = 291
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L +
Sbjct: 58 IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQXLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A S + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
Length = 322
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + ++ + ++ L +++ + L GGK++R L
Sbjct: 1 MTKTTMFALVEADLLAVEQALSEIIHSPVDQLTQVGRHLLQ-------AGGKRLRPALYL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
CA V + L + AIE IH +L+HDD+ +DN RRG PT + ++ ++++
Sbjct: 54 LCAKSRQVETASLLPIAVAIEMIHMATLVHDDV--IDNAATRRGLPTANSRWGNHVSVLS 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AF ++ T I + ++ S+ LQ + +
Sbjct: 112 GDFLFAKAFSTVAKHATPAMLRILTDVVCSMCEGEILQIRDTFSAEQSE------EDYLV 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT + +CE G + A + +E LR +G +G+ FQ+ DD+LD
Sbjct: 166 RIAKKTADFIAASCELGGLSAGLAPDEVAALRRYGHAVGMAFQITDDILDITASSA 221
>gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
Length = 367
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 22/234 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + N R++ L + + + + + L+ A GGK+IR L C
Sbjct: 45 DPELGPAITTNLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLALLC 97
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + ++ +E H +L HDD+ MD+ RRG PT H + A++ G+
Sbjct: 98 AHLGDASRPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGD 155
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
+ A ++S + + GQ+ + + +
Sbjct: 156 LIFARASILVS----------ELGSRALGIQARTFERLCLGQLHETVGPRPDEDPVEHYL 205
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG+L+ + + GAI A A + + L +GE +G+ FQLADD++D
Sbjct: 206 SVIADKTGSLVAASGQLGAIFAGADEAYEPLLVEYGEKIGVAFQLADDVIDVTG 259
>gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
proteobacterium HIMB114]
gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
proteobacterium HIMB114]
Length = 292
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+L+ + +++ L ++ ++RL A+ Y L GGK IRS+LV
Sbjct: 2 SNFQQELKLTADKVNAFLKSYFKNQSA------DNRLYEAMEYGLFSGGKMIRSYLVQST 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+F+++ + + AA+EC+H YSLIHDDLPSMDN RRGK + H Y E TAI+AG+
Sbjct: 56 CKIFDIDEKKYIPIAAAVECVHSYSLIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGS 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LLT AFE+IS PK ++ ++I+++++ +L+ + G G+ GGQ D ++ +D+ +
Sbjct: 116 SLLTLAFEMISDPKFEIDEDIKTKIIHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIID 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q KTGALM F E +++H + + + G +G++FQ+ DD LD
Sbjct: 176 MQNKKTGALMGFCTEVAPLLSHK-KELAKTFKDLGIKIGLLFQIVDDFLDKYGKSE 230
>gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis
HTCC2601]
gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601]
Length = 289
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 129/235 (54%), Gaps = 14/235 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L+ ++ + D +L A +L A+RYA GGK +R +LV E A L
Sbjct: 2 FRDSLEAGARAVAAHFDHVLSDAADL-------PVLHAMRYATTGGKGLRGWLVLEGARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+V AL AIE IH YSL+HDDLP MD+ +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 HDVAPERALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM----I 180
FE+++ P+ +R+ L LSL G +GM+ GQ LD+ E D +
Sbjct: 115 ALGFEMVADPRCHPDPLVRADLTLSLARAAGARGMVLGQALDMAAERADAPLDLQQITAL 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q KTGAL+ ++ E+GA +AHA L + E LG+ FQ+ADD+LD E D
Sbjct: 175 QAGKTGALIAWSAEAGARLAHAD---LAPLTAYAERLGLAFQIADDILDVEGDAE 226
>gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Paenibacillus polymyxa SC2]
gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)
[Paenibacillus polymyxa SC2]
Length = 795
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+ ++ +I+ L T ++L+ A Y+L G GK+IR L
Sbjct: 503 EDFMNTVKTVRDQINNQLK----ITKPSGIEAMKEQLIDAANYSLEGDGKRIRPILTWVM 558
Query: 62 A-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + ++ L + + ++E +H SLI DDLPS DN RRG+ T+H ++ TA + G
Sbjct: 559 GVNEYGLDALAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHQVHNSATAELTG 618
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L+ A +S + + + + S + M LD + + + Q+ M+
Sbjct: 619 LYLIQKAIGEQASLSQFNAETVLALIQYSARKAEDM-CMGQAMDLDSKGKALTLEQLNMM 677
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG A++A ++E L+ F ++GI FQ+ DDLLD E D L K
Sbjct: 678 CFYKTGVAFEACLVMPAMLAQTEESEIAALQKFAYHMGIAFQIKDDLLDVEGDTHLLGK 736
>gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 288
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 121/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 1 MNKLIDEVNNELSVAINKSVLDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 61 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 120
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 121 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224
>gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
Length = 290
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+++ I D + + Q N +L+ A++Y L GGKKIRS ++ + S+ ++++ T +
Sbjct: 4 KLNKIAKDTNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLI 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+GAA+ECIH Y+LIHDDLP MD+ IRRGKP+ HI++ E TAI+AGN L T A EI++S
Sbjct: 64 AIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMACEILTS 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCF 191
K ++ D I+ +L+ L+ G G+ GGQ LD+ E + ++ ++ KTG L F
Sbjct: 124 SKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKTGKLFSF 183
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
C + AI+ E + G +G++FQ+ADDL+D +
Sbjct: 184 CCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLIDFHGNSK 227
>gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
Length = 332
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +Q + + +D ++ L ++T + + S GGK++R +V A
Sbjct: 13 ESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQS-------GGKRLRPLVVLLTA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + +D RRG+ T + + +++ G+
Sbjct: 66 RACGYEQDVEHQELATVIEFIHTATLL-HDDVVDKSTQRRGQKTANALWGNSASVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+I++ I + ++ Q M + D IDE + + +
Sbjct: 125 LYSRAFQILARRSNVPIMKILATTTNQISEGEVWQLM------NQNDPDIDEVTYYEVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D
Sbjct: 179 RKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDAS 231
>gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 339
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + ++++ ++++ + D + + A GGK++R L A
Sbjct: 19 DALVALVKDDLEKVNRAIVDRMHSPVELIPQL-------AGHIIAAGGKRLRPVLTLASA 71
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+
Sbjct: 72 KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ + I S + LQ + + + +
Sbjct: 130 LFSRSFELMVEDGSLSVLAILSHASSVIAEGEVLQLITANDTETSE------DSYLEVIR 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL AC GA++A + E+E L +G NLGI FQL DD+LD
Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233
>gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
Length = 323
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 85/221 (38%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+D L LL + + + L +A + GGK+IR LV + ++
Sbjct: 9 APVDKDL-RLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPALVLLVSRATMLDQDIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ QG+ KT +LM
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEIQQGINLFDTGITL------EAYLEKSYYKTASLMAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ A+++ + E L +G LG+ FQ+ DD+LD
Sbjct: 182 SAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVDDILDFTS 222
>gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
Length = 269
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
+E K I+ L DL + ND++ A++Y L+ G K++R L +FN
Sbjct: 4 KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + +IE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+
Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++S D + + ++ + G+ L D I E + I KT
Sbjct: 115 FEVLSESIKNEVDAMCANYIVKKSGCFGM----IRGQLLDIDSKISEDNIIEIYDKKTCN 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
L+ + S I++ +L + NLG+ FQ+ DD++D E D + KK
Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKIEKK 222
>gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2]
gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2]
Length = 280
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+ D + + T + R+ A++Y+L GGK+IR L+ + V AA
Sbjct: 1 MSDFESYLSHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAA 60
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MDN +RRG PT H+++ E AI+AG+ LLT AF ++ +
Sbjct: 61 IEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACTCRA 120
Query: 139 KDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + +L + G+ + + ID + +I KTG L+ A
Sbjct: 121 EVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAA 180
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++A + + G + G+ FQ+ DD+LD +L K
Sbjct: 181 LLAGH-REDAAVWERIGADTGLSFQIQDDILDVTSTVEELGK 221
>gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
LSR1]
gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
LSR1]
Length = 327
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
+ ++ ++ +++ + + + Y + GGK+IR +
Sbjct: 9 DEVKELTAKDMATVNDTIEEQMRSDVA--------LITEISHYIINNGGKRIRPMIAILV 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + IE IH +L+HDD+ +DN +RRGK TV+ Q+ +++ G+
Sbjct: 61 AQALGYKGNQHITIAVLIEFIHTATLLHDDV--VDNSDLRRGKATVNAQFGNAASVLVGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ T AF++++ + + S + Q + ++ + +
Sbjct: 119 FIYTRAFQMMTQLGSMRVLEVMSTATNMIAKGEVQQLINCKDPRITEENY------LSVI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPKK 237
KT L A +S AI+A A++ ++ L+ +G ++GI FQL DDLLD E KK
Sbjct: 173 GSKTAKLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDLLDYSPENSTGKK 230
>gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
Length = 335
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + L+++ ++T++ + + + L+ A GGK+IR L CA L
Sbjct: 14 LSAALKDDLTAVNTLIRARMASKHAPRIPEVTAHLVEA------GGKRIRPMLTLACARL 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +++ A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L
Sbjct: 68 CGYSGDDHVKLAATVEFIHTATLLHDDV--VDESEQRRGRPTANLLWDNQSSVLVGDYLF 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF+++ P +I S ++ LQ + E + + K
Sbjct: 126 ARAFQLMVEPGNLRVLDILSNAAATIAEGEVLQL------TVASNIETPEETYLQVIRGK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL ACE G ++A + L +G+ LG+ FQ+ADDLLD
Sbjct: 180 TAALFEAACEVGGVIAGRDTFIIQALATYGDGLGVAFQMADDLLDWGG 227
>gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 8102]
gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. WH 8102]
Length = 323
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + ++T L+ LL S + H +A GGK++R +V + + +
Sbjct: 6 ELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALSADGQ 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
R E ++ +D RRG TVH ++D A++AG+ L A
Sbjct: 66 LTPRHRRLAEITEMIHTASLVHDDVVDEASTRRGVDTVHSRFDARVAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + S++++ L QG+ KT +L+
Sbjct: 126 HLANLDDLEVVKLLSRVIMDLADGEVKQGLFRFDTAQSF------ETYLEKSYCKTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +++ S +E + L FG LG+ FQ+ DD+LD L K
Sbjct: 180 ANSARAAGVLSDCSPSELDGLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2]
gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
Length = 293
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
Length = 325
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 16/236 (6%)
Query: 1 MNGGLPSKLQE-NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M +L + R++T++ L + + Q + ++ A GGK+ R ++
Sbjct: 4 MTVDQIRELAAPDMARVNTVIQAKLASDVALIN-QLSQYIIGA------GGKRFRPMVLM 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A ++ A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 57 LAAQALGGTSPWAAQMAAVVELIHTATLLHDDV--VDESTLRRGRDTANALFGNAASVLT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AFE++ + I +Q + LQ M G + +
Sbjct: 115 GDFLYSRAFEMMVEVQEPRVMAILAQATNRIAEGEVLQLMNMGDADVSE------DRYVD 168
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A + A++ + + L +G +LG FQL DD+LD D
Sbjct: 169 VIVRKTATLFAAATQLAAVLEGQPEEVEAALTAYGLHLGTAFQLIDDVLDYTGDEA 224
>gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
ATCC 6940]
gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
ATCC 6940]
Length = 334
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 90/234 (38%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ ++ +L + + ++ + + + GGK+ R +
Sbjct: 15 DPQLSERISAGIAAVEELLHHEIDRGQDFVKEKVS-------HLSSAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A + + + ++ MD RRG + + ++ AI+AG+
Sbjct: 68 SEFGARPGSPEVVKAATVVEMVHVATLY-HDDVMDEAERRRGVESANFRWTNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T S+ L + + G+ ++ +
Sbjct: 127 VLLAHASRLMSQLDTHTV-EHFSETFEELVTGQMRETIGAGEANAVEHYMA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L+ A GA A A+ + LR G +G+IFQ+ DD++D D
Sbjct: 179 REKTAVLIASAGYLGAYHAGATPEQAAALRQIGGAIGMIFQIVDDIIDIFSDSK 232
>gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
Length = 288
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
KL ++ RI D +L + A+ YA GGK++R FLV E A L
Sbjct: 2 FRKKLALDATRIQEQFDLVLDALGDL-------DITRAMAYATAGGKRLRGFLVLESARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ IE +H YSL+HDDLP MD+ +RRG+PTVH+++DE TA++AG+ L
Sbjct: 55 HEIDLARAIWPATGIEALHAYSLVHDDLPCMDDDDLRRGRPTVHVKWDEGTAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQDEFIDETQVFMI 180
T AFE + + +R++L L+L G QGM+ GQ + + ++ +
Sbjct: 115 TLAFE-LCTRPEVGDAGVRAELALTLAQASGAQGMVLGQALDIAAETAATPLTLPEITRL 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
Q KTGAL+ ++ +GA MA A + LR + LG+ FQ+ADD+LD E D K
Sbjct: 174 QSGKTGALIEWSACAGARMAQADP---DPLRQYARALGLAFQIADDILDVEGDADK 226
>gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
Length = 322
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ + L ++ LQ +++ + Y L GGK+IR L+ A L
Sbjct: 1 MHAALSLVGDDLKNVELQFRKDLESDVY-LIRKVGEYVLASGGKRIRPMLLLLSAKLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + IE IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 QGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASANEVWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + S + LQ + + + + + + K KT
Sbjct: 118 FSLMVEAGDLRILKVISGATTIIAEGEVLQLLCTSDLE------MTQERYIEVVKSKTAV 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ ACE+GAI+ +S ++E LR FG +LGI FQL DD LD
Sbjct: 172 LLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEE 219
>gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8]
Length = 328
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 21/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASL-- 64
++ ++ + L + + TQ + L +A RYA+ GGK++R L +
Sbjct: 21 AKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKRVRPLLALSTFLMLI 80
Query: 65 FNVNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+H R A+E IH YSLIHDDLP MD+ +RRG+PT HI Y E
Sbjct: 81 QTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGE 140
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI- 172
A++AG+ L + AFE++S + + L+ + + M+ GQMLDI+ E
Sbjct: 141 DIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDIKGENQV 200
Query: 173 -DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ I + KTGAL+ + GA+ A A L+ + +G+ FQ+ DD+LD
Sbjct: 201 LTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQDDVLDIT 260
Query: 232 ED---LPK 236
D L K
Sbjct: 261 TDTITLGK 268
>gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60]
gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus CGS00]
Length = 293
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ N +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMNTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
Length = 286
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 16/238 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
++ E + + LD L + A+R+A GGK++R+FLV E A+L
Sbjct: 2 FDRRIAEVAATVSGRLDLALRDM--------PGEVGEAMRHATSGGKRLRAFLVCEGAAL 53
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V AL AAIE +H YSL+HDDLP+MD+ +RRG+PTVH++++E TAI+ G+ L
Sbjct: 54 HGVAPGPALDAAAAIEAMHAYSLVHDDLPAMDDDDLRRGQPTVHVKWNEATAILVGDALQ 113
Query: 125 TYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ AF+++S + + + + + G + E + Q+ +Q
Sbjct: 114 SLAFDLLSHAALPADRVVTLTAGMARAAGGMGMVHGQALDIAAETAPEPLSLPQITELQA 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTGAL+ ++ ++G IMA A + + LG+ FQ+ADD+LD E D K+
Sbjct: 174 RKTGALIEWSAQAGPIMADADPG---PMGAYARALGLAFQIADDILDVEGDEAETGKR 228
>gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 296
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLEQITALTTQDMAAVNNVILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S +I+A A+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 322
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMRILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A + + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides]
Length = 256
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 85/198 (42%), Positives = 122/198 (61%), Gaps = 8/198 (4%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
+RYA+ GGK++R FLV E A L + A+ A+IE +H YSL+HDD+P MD+ +RR
Sbjct: 1 MRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRR 60
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
G PTVH ++DE TA++AG+ L T AFE+++ P +R +L+ SL G +GM+ G
Sbjct: 61 GLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLG 119
Query: 163 QMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
Q LDI E Q+ +Q KTGAL+ ++ E+GAI+ A + LR + LG
Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALG 176
Query: 219 IIFQLADDLLDCEEDLPK 236
+ FQ+ADD+LD E D K
Sbjct: 177 LAFQIADDILDVEGDAEK 194
>gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 282
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+L+ + ID LD++L ++ + A+RY++ GGK++R L+
Sbjct: 2 DFNQQLKHKIEIIDKNLDNMLPPADTY-----PPVIHEAMRYSVFSGGKRLRPVLLISAY 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF+ + + + AIE IH YSLIHDDLP+MD+ RRGK T H + E A++ G+
Sbjct: 57 ELFDEHVDDCMPLACAIEFIHTYSLIHDDLPAMDDDDTRRGKATCHKVFGEGIAVLTGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL +AFE++ + +I + + ++ IG L +++ +D+ + I +
Sbjct: 117 LLNHAFEVMLDDIARNPHHIAAAIAIAKAAGIGGMIGGQVMDLLYENKPVDDGVLQYIHQ 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KT AL+C A ++GA+ A A + + +G LG+ FQ++DD+LD D K
Sbjct: 177 HKTAALICAAVKAGALAAGADEVYVRAIEQYGLALGMAFQISDDILDV--DEGGK 229
>gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo]
gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str.
Manfredo]
Length = 290
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + +Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQSLSLSQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 317
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 111/239 (46%), Gaps = 26/239 (10%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA----- 72
IL +LL + + A+ Y+LL GGK++R L+ E LF+
Sbjct: 19 ILMELLPKEEGL-----EREVTEAMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRP 73
Query: 73 --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A +E IH +SL HDDLP MD RRG+ + +Y E +AG+GL YAF++
Sbjct: 74 LLYAFMAGMEMIHSFSLCHDDLPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQL 133
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNI--------GLQGMLGGQMLDIQDEFIDETQVFM--I 180
+S + S + G+ GMLGGQ D++ + + + I
Sbjct: 134 VSKTAAEGFLKPGFSRYASDVNEAVRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLI 193
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ KT AL+ A GA++A AS LR + LG+ FQ+ DD+LD E +L K
Sbjct: 194 YERKTAALISGALSIGALLAGASAESIALLREISKALGLAFQIRDDILDESGAEAELGK 252
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +LQE +D L L L ++ Y+LL GGK++R L A
Sbjct: 1 MARQLQELVAVVDDYLATHLA------GACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAE 54
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L +R A+E IH YSLIHDDLP+MDN +RRGKPT H Y A +AG+G
Sbjct: 55 LLGKTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AFE +S + + +R L+ + + + Q+ + +
Sbjct: 115 LLTLAFEWVSDNQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHR 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KTGAL+ +A +G ++A + L FGE G+ FQ+ DD+LD ++ K
Sbjct: 175 QKTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTATTAEMGK 231
>gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
Length = 345
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++ + +D ++ L + Y + GGK++R +V A F
Sbjct: 33 VADDMQAVDALIQQRLHSDVVLINQLG--------HYIINSGGKRLRPMVVLLSARAFGY 84
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + A
Sbjct: 85 QGSYHIDIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRA 142
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + I ++ ++ +Q + + E I + KT
Sbjct: 143 FEMMVGVDSMRVMEILARTTNTIAEGEVMQLLNC------HEPDTTEECYLEIIRSKTAK 196
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A + GA++ H E++ + +G +LG FQL DD+LD DL K
Sbjct: 197 LFEAATQLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 248
>gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
Length = 346
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 5/226 (2%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNVNH 69
E + RI I+D+ ++ T + L A + Y GGK++R +V A + +
Sbjct: 20 EYASRISKIVDEFIMNTIRGI----PSTLYEAALHYLRAGGKRLRPLIVVLGARIVGGDE 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+ A++E +H ++L+HDD+ D D +Y
Sbjct: 76 DIAIPGAASVEVLHTFTLVHDDIIDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRCL 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ + + + + + + I + ML + + + K KT AL
Sbjct: 136 LRALERGVPVERVNKAIDILTDAAITVAEGQALDMLLPSMQNVSINDYIEMVKKKTAALF 195
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA +A + L+ N GI FQ+ DD+L D
Sbjct: 196 ASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDILGLIGDEK 241
>gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR]
gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR]
Length = 323
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+++ + ++ L + + ++ + LL+A GGK++R F
Sbjct: 9 EIRHDLVLVEKELKKIANLPEEKLLSETSGHLLNA------GGKRLRPAFALLAGKTFQY 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L + A+E IH +L+HDD+ +D RRG PTV ++ ++ G+ + +
Sbjct: 63 DLEKLLPLAVALELIHMATLVHDDV--VDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I+ I + + + ++ +Q D K KT
Sbjct: 121 LIQIARCNNTKIAEILADVSVKMSEGEIVQL------RTTFDPKQSLRDYLFRIKRKTAL 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ +CE GA+ A A +N LR +G LG+ FQ+ DD+LD +L K
Sbjct: 175 LISASCELGALAAGAPENFIRALRWYGYYLGMAFQITDDILDLIAEEKELGK 226
>gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 325
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 6/218 (2%)
Query: 20 LDDLLLQ-TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L + + + + Q + IRY L L GK++R L A LF + + A
Sbjct: 7 LSRYVQEALTAAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAA 66
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+ MD +RRG+ TVH ++D+ AI++G+GLL A+E ++ +
Sbjct: 67 LAIEYFHNFSLI-HDDIMDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKE 125
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + T Q + Q Q + ++KT L+ A GA
Sbjct: 126 NLLDLLTTFNKVATEVCEGQQLDMDFESLNQVTE---AQYLHMIRLKTSVLLGGALRMGA 182
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+ AS ++E + FG N+GI FQL DD+LD D
Sbjct: 183 IIGQASVEQQELIYDFGVNVGIAFQLQDDILDVYGDPE 220
>gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
Length = 307
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L ++E + RI+ +L+ + Q +L ++ Y++ GGK++R L
Sbjct: 4 MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57
Query: 60 ECASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
FN ++ A+E +H YSLIHDDLP+MDN +RRGKPT H Y A +
Sbjct: 58 ATLITFNQAITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GL AF+ + + L L+ ++ + + ++
Sbjct: 118 AGDGLQALAFQWVVDNDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHELQ 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ +A +G IMA +++K+ L F N G FQ+ DD+LD D
Sbjct: 178 KLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234
>gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
14600]
gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
14600]
Length = 305
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 11/240 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + +L+E + + I+ L + + +T ++ A+ YAL+ GK++R L+ E
Sbjct: 8 DMDVRRELEERTLEAEGIIRRFLPREEGYQKT-----IMEAMSYALMSPGKRLRPILMRE 62
Query: 61 CASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
CA+ F+ AL A IE IH YSL+HDDLP+MDN +RRGKPT H ++ E ++A
Sbjct: 63 CAACFDQTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLA 122
Query: 120 G----NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G N A + + + T + L+ G+ G + + +D+
Sbjct: 123 GDALLNYAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKH 182
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ I ++KTGAL+ A GA++ A +++ + +G+ FQ+ DD+LD D
Sbjct: 183 RLDFIHELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGDEK 242
>gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str.
'morsitans']
gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str.
'morsitans']
Length = 323
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++T + + L + + Y + GG K+IR +
Sbjct: 1 MNIEQITELTAQDMAEVNTAIREQLNSEVALINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALHYQGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF+++++ ++ + S+ + + LQ M D ++
Sbjct: 111 VGDFIYTRAFQMMTALESLRVLELMSEAVNIIAEGEVLQLMNCNDPDITIDNYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI+A A ++ LR +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAASQSSAILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122]
gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635]
gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122]
gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635]
Length = 293
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + I+ + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 288
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 1 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 61 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 120
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 121 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224
>gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus
N315]
gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu3]
gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781]
gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763]
gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719]
gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299]
gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115]
gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300]
gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224]
gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937]
gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117]
gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102]
gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819]
gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1]
gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796]
gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315]
gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781]
gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763]
gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719]
gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299]
gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115]
gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300]
gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224]
gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937]
gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102]
gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117]
gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus aureus 04-02981]
gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819]
gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796]
gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172]
gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193]
Length = 293
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGV 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus
donghaensis MPA1U2]
gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus
donghaensis MPA1U2]
Length = 324
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S L+ + I+ L+ + + + +++ GGK+IR V
Sbjct: 9 LYSDLKPELEMIEKELEQAVDSKSLLLND-------ASLHLLQAGGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N N +V +E IH SL+HDD+ +D+ IRRG+PTV Q++ A+ G+ +L
Sbjct: 62 GNYNVDVMKQVAVPLELIHMASLVHDDV--IDDSEIRRGQPTVKAQWNNSVAMYTGDFIL 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E I+ ++ I S+ ++ + +Q ++ ++ K K
Sbjct: 120 ARALEHITEIESPRVHEILSKTLIEVCRGEIIQIQDKYRLDQNLRDYFRR------IKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +CE GA+++ + LR FG +G+ FQ+ DD+LD +L K
Sbjct: 174 TALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQIIDDILDFTSTDEELGK 228
>gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
DFL-43]
gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
DFL-43]
Length = 338
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ ++ + + N + S GGK++R L A++F +
Sbjct: 27 DMERVNQLILSKAGSDVAMIPEVANHLISS-------GGKRLRPMLTLASATMFGYSGDF 79
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ ++E +H +L+HDD+ +D +RRG+ T + + +++ G+ LL AF+++
Sbjct: 80 HIKLATSVEFMHTATLLHDDV--VDESDLRRGRSTARMIWGNQASVLVGDFLLGQAFKMM 137
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S + LQ ++ E + + KT AL
Sbjct: 138 VEVGSLEALDVLSTAAAVIAEGEVLQL------SVAKNMETTEDDYLSVIRAKTAALFSA 191
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
ACE G I+A S+ E+ LR +G NLG+ FQL DD+LD DL K
Sbjct: 192 ACEVGPIIAETSKAERSALRSYGINLGLAFQLIDDVLDYGGSANDLGK 239
>gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
Length = 323
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ L++ LL + + ++ L I+ GGK+IR LV A N ++ +
Sbjct: 15 SCLEEELLSSIKTNEPFLSEPLERTIK---AGGKRIRPALVYLSARFGNYDYEKIKPLAV 71
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E +H +LIHDD+ +D+ +RRG TV + A+ AG+ +L F+I+
Sbjct: 72 AVELVHTATLIHDDI--VDDSPLRRGISTVQAAIGKDAAVYAGDYVLARTFKILVDHGDF 129
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
S ++ + Q + ++ + KT L +CE GA
Sbjct: 130 DILKSVSSVLYRVCEGEVRQKREAFDITISFLDYARR------IRKKTALLFALSCELGA 183
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A L+ +G LG+ FQ+ DD+LD ED
Sbjct: 184 RGAKADPRTISALKKYGILLGMAFQVMDDILDLTEDES 221
>gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus
licheniformis ATCC 14580]
gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
licheniformis ATCC 14580]
gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2]
gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus
licheniformis ATCC 14580]
gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580]
gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2]
Length = 320
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 20/237 (8%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
S L ++ + I+ L+ + L A + L GGK+IR V
Sbjct: 5 TFYSFLNDDIELIEKELEKTVHS--------DYPLLSEASLHLLQAGGKRIRPVFVLLSG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ V ++E IH SL+HDD+ +D+ +RRG+PT+ ++D A+ G+
Sbjct: 57 MFGEYDISKIKNVAVSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNRIAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + E ++ I S+ ++ + Q D + + +
Sbjct: 115 LFARSLEAMTKINEPKAHEILSKAIVEVCLGEIEQI------KDKYNMEQNLRTYLRRIR 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +C+ GAI A A +N + L FG +G+ +Q+ DD+LD +L K
Sbjct: 169 RKTALLIASSCQLGAIAAGAGENIHKTLYWFGYYVGMSYQIIDDILDFTSSEKELGK 225
>gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8]
gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8]
Length = 325
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L+ +++ID +++ + L GGK++R +V A
Sbjct: 6 SDLSAYLKSVAQQIDGMIEKNFTHAGGELDRASAHLLS-------AGGKRLRPAVVMLSA 58
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ + + + A+E H ++LIHDD+ MD +RRG PTVH ++D T I+AG+
Sbjct: 59 DAIRHGSSKDVMPAALALEVTHTFTLIHDDI--MDGDSLRRGVPTVHTKWDMPTGILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AFE I K +++ +L+ +G + E + +
Sbjct: 117 VLYARAFEFICQSKADEGPKVQAVALLARACADICEGQHQDMSF-EHRADVTEEEYMAMV 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L A G +A + + L FG N GI FQ+ DDL+D K
Sbjct: 176 AKKTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLIDLLTPTEK 230
>gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
Length = 323
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARAMGYKGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 112 GDFIYTRAFQMMTSMGSLRILALMSEAVNVIAEGEVLQLM------NVNDPDITEESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A A+ E++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAASQASAILAEATPEEEKALQDYGRYLGTAFQLIDDLLDYSADGETLGK 225
>gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia
stuttgartiensis]
Length = 323
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ I+ ++D++ + +Q Q+N + + GK++R L +
Sbjct: 4 EDIFASIEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTA 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + +E +H +L+HDD+ +D +RR +++ ++ +I+ G+ L + F
Sbjct: 64 PQHIDLAVVVEMVHTATLVHDDI--IDEAAMRRHVESMNSKWGREISILFGDYLFSRGFT 121
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+S + + +L + Q+ D + E I + KT +L
Sbjct: 122 ILS------ALDSQIATLLLSQTVNTMCEGELIQLKRRYDVGLSEEDYIDIIEKKTASLC 175
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+C GA A A+ E + +G +G FQ+ DD LD D
Sbjct: 176 ATSCRLGATFAGANHKLSEMMSNYGLKIGTAFQIIDDCLDFMGDE 220
>gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
43049]
gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
43049]
Length = 346
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 20/247 (8%)
Query: 9 LQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ E ++++ + D + + Q D L A RY L GGK++R ++ A
Sbjct: 1 MSERHQQVEDAIVARRDRVNDALPEDLPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAE 60
Query: 64 --------------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
+ A + AA+ + MD+ +RRG P VH
Sbjct: 61 SLLDVDPLTADYRDFPTLEGGQADMMSAALAIEVIQTFTLIHDDIMDDDALRRGVPAVHK 120
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+YD TAI+AG+ L + AFE + + + + L+ T +G Q
Sbjct: 121 EYDLSTAILAGDTLYSKAFEFLLETGAAHERTVDANKRLATTCTRICEGQSLDIEF-EQR 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + ++KT L A A + A + + L +G ++G FQ+ DDLLD
Sbjct: 180 DVVTPEEYLEMVELKTAVLYGAAASIPATLLGADEQTVDALYNYGLDVGRAFQIQDDLLD 239
Query: 230 CEEDLPK 236
K
Sbjct: 240 LTTPSEK 246
>gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
Synthase
gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
Synthase
Length = 301
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
Length = 327
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 13/225 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN---VNHL 70
++T + + S ++++ L+ I Y ++ GGK++R LV A ++
Sbjct: 10 VNTEFNLVNDHILSQLKSEIP--LIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNY 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
V A ++ +D +RRGK T + ++ +++ G+ L + AF+I
Sbjct: 68 QDNMVKMATIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQI 127
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + I ++ ++ Q + G + + + KT L
Sbjct: 128 MVEVGSMQCMQILAETTNIISEGEVQQLINCGDPSTSE------ESYLKVIQYKTAKLFE 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GAI+A+A++ +++ L +G +G FQL DD++D
Sbjct: 182 GAALCGAIVANANKEQQQALADYGTYVGTAFQLIDDVMDYTSTAE 226
>gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6]
gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6]
Length = 319
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ + S+ I+ + + L + + L +A R+ + GGK++R + A
Sbjct: 2 SIKEEVLKRSEIINRAISEYL-------PVKEPEGLYNAARHLINAGGKRLRPVMCLISA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + AIE IH ++LIHDD+ MD +RRG PTVH+ YDE TAI+AG+
Sbjct: 55 EAVGGDVESVIPAAVAIETIHNFTLIHDDI--MDRDELRRGVPTVHVAYDEPTAILAGDT 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF+I+SS + ++ +++ ML+ +G + +++ + ++ + +
Sbjct: 113 LFAEAFKILSSCNVEAENLVKASRMLADVCIEICEGQYLDMSFEKREKISE-SEYLEMVR 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ AC A++ + L FG GI FQ+ DD+LD
Sbjct: 172 KKTAVLIASACAMPAVLFGMDS-YAKALWNFGIYSGIGFQIHDDVLDITG 220
>gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
Length = 323
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL E K I+ +D + + M++ L Y + GK+IR V A++
Sbjct: 3 KLDEIKKPIEKEIDAFEEKFKASMKSSVP-LLDRITHYIVKRKGKQIRPMFVFFSANISG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +E +H +L+HDD+ +DN + RRG +V+ + A++ G+ LL
Sbjct: 62 GITESTYHAATFVELLHTATLVHDDV--VDNSFERRGFFSVNALWKNKIAVLVGDYLLAK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + + I S + L+ LQ +M ++ + + + + KT
Sbjct: 120 GLLLSVDHQEFKQLKIVSDAVQQLSEGELLQMEKVRRMDISEEVYYE------VIRKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
+L+ C +G+ A A+ +++ FGE +GI FQ+ DDL D +D+ K
Sbjct: 174 SLIASCCAAGSTSAGATDEIVKKMHDFGEKIGIAFQIKDDLFDFGTDDIGK 224
>gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM
1740]
gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes]
Length = 286
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 5/224 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV 67
L+ + + L++ +N+ L +R GGK+ R L+ ++L +
Sbjct: 3 LESVMEGFERFLEE-EAPLFEGFHPHYNEYLWEMVR---NGGKRFRPRLLLGVVSALAPL 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+A A+E +H YSLIHDDLP+MDN RRG PT+H++YDE +A++AG+ L T+A
Sbjct: 59 LVKSAYAPALALEILHTYSLIHDDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHA 118
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +++ + L+ G + + + ++ ++ I KTG
Sbjct: 119 FYLLAQAPLGSDTKVALVRELASAGGAGGMVLGQALDCYFEHQKLEIEKLRFIHLHKTGR 178
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ + + GAI+A S+ E+ RL G LG++FQ+ DD++D
Sbjct: 179 LIAASLKMGAIIAALSKEEQARLEEIGLKLGLLFQVQDDIIDAT 222
>gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 290
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LAFPFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
Length = 323
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E ++ LD LL S + H +A GGK++R +V +
Sbjct: 2 ATVAELLHPVEADLDTLLADLRSLIGAGHPILQAAAEHLFAAGGKRLRPGIVLLLSRAVA 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PDGELTPRHRRLAEITEMIHTASLVHDDVVDEAATRRGVDTVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLFRYDTTQSF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ + L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSARAAGVLSGLPAPRLDDLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS]
gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
pyogenes MGAS5005]
gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes M1 GAS]
gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
pyogenes MGAS5005]
gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 290
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LAFPFKAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Paulinella chromatophora]
gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Paulinella chromatophora]
Length = 323
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + +++ L+ LL + + H +A GGK+IR +V + +
Sbjct: 6 KLLQPVESDLETLLSDLRNLIGADHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSPTGD 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ R E ++ +D RRG TVH +++ A++AG+ L A
Sbjct: 66 LSPRHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + S++++ L QG+ + +I+++ KT +L+
Sbjct: 126 HLANLDNLEVVKLLSRVIMDLADGEVKQGLFRYNTRQSFETYIEKSYC------KTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + ++A ++ +L FG LG+ FQ+ DD+LD L K
Sbjct: 180 ANSARAAGVLADLNEEHLVQLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
Length = 293
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 10/235 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
L + S+ +DD L T + Q + L +A+ Y+L GGK++R L ASLF
Sbjct: 3 LNDFSQYARRRVDDYL--TLNLGQYEPATHLQNAMAYSLFNGGKRVRPMLTYAAASLFGE 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ AAIE IH YSLIHDDLP+MD+ +RRGKPT HIQYDE TAI+AG+ L T+A
Sbjct: 61 ANNLTDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQTFA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
FE++S ++ QL+ L H G GM+ GQM+D I+ ++ + + KT
Sbjct: 121 FELLS-NPKHQSTKVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQHKT 179
Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GAL+ + GAI A S+ + L + +G+ FQ+ DD++D D L K
Sbjct: 180 GALIRASIRMGAISTGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSDTTTLGK 234
>gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Arthrobacter aurescens TC1]
gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Arthrobacter aurescens TC1]
Length = 367
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + N R++ L + + + + + L+ A GGK+IR L C
Sbjct: 45 DAELGPAITTNLARVEKKLREAISNSDP-LADATSRHLVEA------GGKRIRPLLTLLC 97
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + ++ +E H +L HDD+ MD+ RRG PT H + AI+ G+
Sbjct: 98 AHLGDASRPEVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAILTGD 155
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
+ A ++S + + GQ+ + +++
Sbjct: 156 LIFARASILVS----------ELGSRALGIQARTFERLCLGQLHETVGPREDEDPVEHYL 205
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG+L+ + + GAI A A ++ ++ L +GE +G+ FQLADD++D
Sbjct: 206 SVIADKTGSLVAASGQLGAIFAGADESYEDLLVEYGEKVGVAFQLADDVIDVTG 259
>gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 322
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + ++ G+ L
Sbjct: 58 ALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPRVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I S+ + LQ I+D E + +
Sbjct: 116 YSRSFEMMVELGSMEVMRILSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A + +A + + E LR FG++LG+ FQL DDLLD D
Sbjct: 170 KTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 221
>gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(GGPS) [Includes: Dimethylallyltranstransferase ;
Geranyltranstransferase ; Farnesyltranstransferase ]
[uncultured archaeon]
Length = 357
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 20/255 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M + + + +I+ L D ++ AS + + +++ Y L GGK++R
Sbjct: 1 MAADIDGVVAQYQAKINERLGWFFDEKIEEASKISDYTQEVVVNIKEYTLRGGKRLRPIF 60
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ +++ A+ + + L+ MD +RRGKPT HI+Y+ + A
Sbjct: 61 LIYGYKCITEDNIDAIIEASISIELMQSYLLI-HDDIMDEDELRRGKPTFHIEYENICAT 119
Query: 118 IAGNGLLTYAFEIIS------------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ G+ E I+ T + + ++ + GQ+L
Sbjct: 120 LFGDDDTRKFGENIAILAGDLLEAYGIDVLTNSRFKEEYITRALQKYAEIVKNVGYGQIL 179
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIF 221
DI E + I ++ + + GAI+A A + + + +G LG+ F
Sbjct: 180 DIMSEKKKDITEAEILRIHKLKTASYTIENPLQIGAILAGAVEADLAVMSNYGLPLGLAF 239
Query: 222 QLADDLLDCEEDLPK 236
Q+ DD+L K
Sbjct: 240 QIQDDILGLFGTEEK 254
>gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948]
gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765]
gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132]
gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754]
gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948]
gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765]
gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754]
gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01]
gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131]
gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189]
Length = 293
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150]
gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150]
Length = 290
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN-HLTA 72
+ID + D + + L+SAI Y++ GG K+IR + + F + +
Sbjct: 6 KIDAAIRDYYQKK----NLPVSHELISAILYSVDGGGKRIRPLIFLDLLEGFGLELTDSH 61
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
V A++E IH SLIHDDLP+MDN RRG T H ++DE TAI+AG+ L F++++
Sbjct: 62 FDVAASLEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDPFDLLA 121
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + LS + + + +D +Q+ I + KTG L+ F
Sbjct: 122 QTELSAEIRVELIQALSHASGTFGMVGGQMLDMKGEGQELDLSQLAQIHEHKTGKLLTFP 181
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I+A + L+ G+ +G+ FQ+ DD+LD D
Sbjct: 182 FVAAGIVAQQGLEVLDNLQEAGQLIGLAFQVRDDILDVTADFE 224
>gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
Length = 349
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ GL +++++ + ++T+L + + T+ + L+ A GGK+ R LV
Sbjct: 29 DAGLRTRVRDGLEAVETLLRQAVRSSGYPFLTETSRHLVEA------GGKRFRPLLVLLA 82
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A +E H +L HDD+ MD +RRG + + ++ AI+ G+
Sbjct: 83 AEYGDPTAPGVVPAAAVVELTHLATLYHDDV--MDEAVVRRGTASANARWSNTIAILTGD 140
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A ++++ + I+++ L + + ++ +
Sbjct: 141 FLFSRASDLLADLGPE-AVRIQARTFERLVQGQIRETL------GPEEGVDPVEHYLRVV 193
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+ + A + + +GE +G FQL+DDLLD D
Sbjct: 194 ADKTGSLIATAARFGAMFSGAPAWIVDVMVTYGERIGTAFQLSDDLLDVMSDS 246
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
L++ +RI L L + + L +A+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTALAAFS------IPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFEI+ + + + L M+ GQ L + + +D+T++ I
Sbjct: 126 AFEILGSRLFDEQGQGIDSQIVLKQMQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185
Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ A +LR FG+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITASTE 240
>gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 288
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 1 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 61 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 120
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 121 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 181 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224
>gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
25486]
gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
25486]
Length = 336
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + ++ ++ L D + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVRTGLSAVEAGLLDATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 AAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +D +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 MAGKTGSLVAVSVRFGAMMSGADERVVDTLTQYGERLGVAFQLADDVLDIASDS 229
>gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella
excrementihominis YIT 11859]
gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella
excrementihominis YIT 11859]
Length = 326
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Query: 9 LQENSKRIDTIL----DDLLLQTASHMQTQHND--RLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + + + I+ +DLL + +D + Y + GGK++R ++
Sbjct: 1 MSQVAAAVQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLI 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+
Sbjct: 61 ARALGYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAPAILTGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + AF+++ + I + + ++ +Q + +I D +DE + F +
Sbjct: 119 FMYSRAFQLMVRTQNLRICEIVAGAVNRVSEGEVIQLL------NIHDTTLDEARYFDVI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG L A +++A AS+ ++++ + LG FQ+ DD+LD
Sbjct: 173 ERKTGVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223
>gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 324
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + ++ + + I+ L+ L ++ + L GGK+IR A
Sbjct: 9 LYADIKSDIEVIENELEQALNSSSHLLNDASVHLLQ-------AGGKRIRPVFTLLSAKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ N + +E IH SL+HDD+ +DN +RRG+ TV Q++ A+ GN +
Sbjct: 62 GDYNIDRMKNIAVPLELIHMGSLVHDDV--IDNSDMRRGRETVKAQWNNRVAMYTGNFIF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + ++S + I ++ M+ L + +Q ++ ++ K K
Sbjct: 120 ARALQYVTSIENPRAHQILAKTMVELVNGEVIQIEDKFRLDQSLKDYFRR------IKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L+ +CE GA+++ A + L+ +G +G+ FQ+ DD+LD
Sbjct: 174 TALLIESSCELGAVVSGADEKTARHLKRYGYFVGMSFQIVDDILDFTA 221
>gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163]
Length = 323
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLEQITKLTTQDMAAVNKVILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALAYDGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S +I+A A+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 329
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 15/240 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
++ + L+ + K I L+ + L + + L GK++R +V
Sbjct: 4 ISTTIKQDLEIHRKAIIQFLE-------TEALEGFPSNLADSTYHIMTLEGKRLRPIMVL 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A F V A+ AIE H ++L+HDD+ MD +RRG TVH +Y AI+
Sbjct: 57 MAAQGFGVTTEAAMSAAIAIEVFHNFTLVHDDI--MDKALVRRGTITVHEKYGVDKAIVT 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L ++ ++ ++ + L + M E + +
Sbjct: 115 GDAMLPHSMGLL---IKGTEEKSAVLMKSFLKMAQEVMEGQQYDMEFETQEIVTVEEYMN 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
+ ++KT L ACE GAI+ +AS ++++L FG G+ FQ+ DD LD D K+
Sbjct: 172 MIRLKTSVLFGCACEIGAILGNASIEDQKKLYDFGLYTGLAFQIMDDYLDTFGDDTFGKR 231
>gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
Length = 289
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 4/227 (1%)
Query: 13 SKRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ I IL D LL A + + H + GGK+ R LV +
Sbjct: 1 MQHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQL 60
Query: 70 LTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +IECIH YSLIHDDLP MDN +RRG PT+H +Y E A++ G+GL TYAF
Sbjct: 61 VKNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + + + L++ IG + + +++ + Q+ I KT L
Sbjct: 121 ALLAQARLDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAKL 180
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + E GAI+A+A ++ L FG LG+ FQL DD++D +D
Sbjct: 181 IATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQDSS 227
>gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus aureus subsp. aureus ST398]
Length = 293
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N H +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTKHELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + I+ + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
ATCC 29083]
gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
ATCC 29083]
Length = 336
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGMTAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 AAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + QD +
Sbjct: 123 DFLFARASHILADLGPEAVRVQSEAFERLVTGQI-------LETAGPQDGRDPVEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADERVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus
P2]
Length = 332
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L E ++ + + + ++ ++ GGK++R ++
Sbjct: 3 SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH+++ E AI+AG+
Sbjct: 56 SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMI 180
L AFE ++ L N + +I + + ++ + E + +
Sbjct: 114 YLHAKAFESLNESLKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQM 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K KT L + G I+ A+ + ++L +G NLGI FQ+ DD+L D L K
Sbjct: 174 IKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGK 232
>gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
Length = 337
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + + + ++ ++ D + + A GGK++R L C L
Sbjct: 19 MMTLVAADMNEVNAVILDRMQSEVPLIPEL-------AGHLIAGGGKRMRPMLTLACGRL 71
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ ++ AA+E IH +L+HDD+ +D +RRG+ T ++ + +++ G+ L
Sbjct: 72 LDYPGRRHCKLAAAVEFIHTATLLHDDV--VDKSDLRRGRKTANVIWGNSASVLVGDFLF 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AFE++ + I S+ + Q + E Q I K
Sbjct: 130 SRAFEVMVEDGSLKVLKILSRASAVIAEGEVNQL------SAQRRIETSEDQYLAIINAK 183
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L AC+ A++A + + L +G NLGI FQL DD +D D
Sbjct: 184 TAELFAAACKIAAVVAERDEATEAALDAYGRNLGIAFQLVDDAIDYVSDAE 234
>gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
pyogenes MGAS10270]
gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10270]
Length = 290
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
Length = 332
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +Q + +D ++ L ++T + + S GGK++R +V A
Sbjct: 13 ESLRQPVQNDIAAVDALIVKELSSHVPLIETITHHIIQS-------GGKRLRPLVVLLTA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + +D RRG+ T + + +++ G+
Sbjct: 66 RACGYEQDVEHQELATVIEFIHTATLL-HDDVVDKSTQRRGQKTANALWGNSASVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+I++ I + ++ Q M + D IDE + + +
Sbjct: 125 LYSRAFQILARRSNVPIMKILATTTNQISEGEVWQLM------NQNDPDIDEVTYYEVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D
Sbjct: 179 RKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKDAS 231
>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 309
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
L+ + D L+ LL + ++RY++ GGK++R L E +
Sbjct: 10 ELLKSGAAATDAALERLLP-----GSEIAPHSIHRSMRYSVFAGGKRLRPILCMEAGRMV 64
Query: 66 -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+G+A+E +H YSLIHDDLPS D+ +RRGKPT HI + E AI+ G+ L
Sbjct: 65 AGKLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQ 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----------EFID 173
T+A+E +S + ++ +++ G+ G +
Sbjct: 125 TFAYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPT 184
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE- 232
QV I + KTGAL+ + +G I A AS E LR FG+ G+ FQ+ DD+LD +
Sbjct: 185 AEQVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQS 244
Query: 233 --DLPK 236
DL K
Sbjct: 245 SEDLGK 250
>gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
Length = 323
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + E+ ++ ++ L + + + GGK+IR +
Sbjct: 1 MNLESIIELTNEDMSAVNKVILSQLNSDVALINQLGYYIISG-------GGKRIRPMIAI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S+ + LQ M ++ ++
Sbjct: 112 GDFIYTRSFQMMTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A + AI+A+A+ +++ L+ +G +G FQL DDLLD + D L K
Sbjct: 166 VIYSKTARLFEAASHASAILANATPAQEKALQDYGRYIGTAFQLVDDLLDYDADNTQLGK 225
>gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
Length = 309
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
+ +D ++ L + Y + GG K++R LV A F +
Sbjct: 1 MQAVDAVIRKSLHSDVVLIN--------QVAEYIINGGGKRLRPALVLLSAGAFGEVNAR 52
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ + + AF+++
Sbjct: 53 HHELAAVVEFIHTATLLHDDV--VDESAMRRGRATANTLFGNAASVLVGDFIYSRAFQMM 110
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + ++ + LQ + ++ D I + + KT L
Sbjct: 111 VGVESMRVMEVLAEATNIIAEGEVLQLL------NVHDADITDEAYLKVIHYKTAKLFEA 164
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A GAI+ AS+ +++ + +G LG FQL DD+LD D
Sbjct: 165 ATRLGAIICSASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGDS 207
>gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 322
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + ++ +D I+ + + +QT D ++SA GGK++R LV
Sbjct: 5 SMRALVADDFIAVDEIIRQQIQSKVALVQTIG-DYIISA------GGKRLRPLLVLLGGR 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A IE +H +L+HDD+ +D +RRG+ T + Q+ +++ G+ L
Sbjct: 58 AVGYHKEDLRILAATIELLHTATLLHDDV--VDKSGLRRGRATANAQWGNAPSVLVGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ I SQ + LQ ++D E I +
Sbjct: 116 YSRSFEMMVGLGNMPVMKILSQATRIMAEGEALQL------SRVRDVSTSEETYMQIIRS 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L+ + S A++A A+ E+ LR FGE+LGI FQL DD+LD D L K
Sbjct: 170 KTSVLLEASSHSAAVLASATDYERHALRGFGEHLGIAFQLIDDVLDFRGDSQALGK 225
>gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
87.22]
Length = 336
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + +Q A ++ L GGK+ R LV
Sbjct: 13 DQALEADVQAGMAAVEEGLLEATKSEVPFIQ--------EAAQHLLRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++D A++ G
Sbjct: 65 AAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVPSANARWDNSLAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +++ +T I + +D +
Sbjct: 123 DFLFARASHVLADLGPDAVRIQAEAFERLVTGQI-------LETAGPRDGRDPIDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+MA A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVAGRLGALMAGADETVVDVLTQYGERLGVAFQLADDVLDVASDS 229
>gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
Length = 347
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 8/230 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
L + L+ + + MQ+ A GGK++R LV A L
Sbjct: 23 EDALTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLC 82
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ L
Sbjct: 83 GYRGQRHVGLAACVEFIHTATLLHDDV--VDESDLRRGQASANAIFGNKASVLVGDFLFA 140
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++++ + +I ++ LQ ++ + Q + + KT
Sbjct: 141 RAFQLMTADGSLEVLDILCGASATIAEGEVLQLVIQNDTSSTE------AQYLEVIEGKT 194
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL A GA++A + E + L +G N GI FQL DD LD +
Sbjct: 195 AALFAAATRVGAVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQE 244
>gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
Length = 327
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 16/224 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+R++ +L++ + L A Y L GGK++R +V F T
Sbjct: 14 LRRVEDLLEEEVASREPA--------LQEASLYLLRAGGKRLRPLVVLVSGR-FGPRRDT 64
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
V AA + +D RRG+PTV + + A+ G+ L A E++
Sbjct: 65 EALVRAAAALEMIHMATLVHDDVIDRSDTRRGRPTVKAAWGDQLALYTGDFLFARALELL 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + + + + + QM D+ + + + KT LM
Sbjct: 125 SEMEDRRLHEVTAWAIARMCQGE------LEQMHDLYRIDQPLFRYYRRIRQKTALLMAV 178
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+C GA A A + L FG +LG+ FQ+ DD+LD D
Sbjct: 179 SCLVGARAAEADEETARALWRFGGHLGMAFQIVDDVLDLVGDEA 222
>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AB900]
Length = 303
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 14/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185
Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD +
Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSNTE 240
>gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 11/229 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HL 70
++I+ L L L A+ Y+L GGK++R L + +
Sbjct: 9 KEQIENYLSKSLAA------DVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTLND 62
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
LR +A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT AF+
Sbjct: 63 DLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQW 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + L L+ + ++ + + + Q+ + + KTG L+
Sbjct: 123 VADNHLPANIRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIR 182
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+A +G IM S K+ L FGEN G+ FQ+ DDL+D E++ K
Sbjct: 183 YAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231
>gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 319
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
++E+ K+ID + + + ++ +D + L GGK+IR LV A +
Sbjct: 6 EFVKEDMKKIDEFILANVKTNSPTIKKAIDDLV-------LSGGKRIRPLLVIAIARMGE 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + + A+IE +H +LIHDD+ +D+ +RRG+ +V +Y + TA+ G+ L +
Sbjct: 59 YSEEKIIPIAASIEIMHMATLIHDDI--IDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQ 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF +I+ ++ + ++ + ++ Q + + + + KT
Sbjct: 117 AFNLIADIISKENLKLIAKGVKAICEGEIEQF------DNRYNLDLSIKKYLKRIYRKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L +CESGA A + +R FG +G FQ+ DD+LD E
Sbjct: 171 LLFAISCESGASQAGLPKEMIRAMRHFGLEIGTAFQIVDDILDYEG 216
>gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
Length = 269
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
+E K I+ L DL + ND++ A++Y L+ G K++R L +FN
Sbjct: 4 KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + +IE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+
Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++S D + + ++ + G+ L D I E + I KT
Sbjct: 115 FEVLSESIKNEVDAMCANYIVKKSGCFGM----IRGQLLDIDSKISEDNIIEIYDKKTCN 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
L+ + S I++ +L + NLG+ FQ+ DD++D E D+ KK
Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKINKK 222
>gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
Length = 318
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++++ ++ ++ + L + ++L A R+ + GGK++R L
Sbjct: 4 EEIKKRAEIVNDEIKKFL-------PVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAI 56
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
++ L AIE +H ++LIHDD+ MD +RRG TVH Y TAI+AG+ L
Sbjct: 57 ERDYRKILPAAVAIEVVHNFTLIHDDI--MDEDELRRGVKTVHTIYGVPTAILAGDTLFA 114
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+I+S + + ++ + L+ +G + ++ + + + + KT
Sbjct: 115 EAFKIMSYCEVESENLVNGMRKLAEVCVEICEGQQMDIEFEEREFVSE-EEYLEMVRKKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L+ + AI+ + ++ L +G N GI FQ+ DD+LD
Sbjct: 174 SVLIALSSSIPAILFG-EKKYEKALWNYGINAGIAFQIKDDILDLLG 219
>gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11]
gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46]
Length = 288
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 1 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 61 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 120
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 121 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224
>gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126]
gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ID + D + + L++AI Y++ GGK+IR + + F +
Sbjct: 2 SKLNKIDAAIRDYYQKR----NIPVSSDLITAILYSVDSGGKRIRPLIFLDLLEGFGLEL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A++E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 58 TPSHFDVAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ + ++ +LS + + + + +D +Q+ I + KTG L
Sbjct: 118 DLLAQTDLSAEIRVQLIQVLSHSSGTFGMVGGQMLDMKGEGQELDLSQLAKIHEHKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ F + I+A Q E L+ G +G+ FQ+ DD+LD D L K
Sbjct: 178 LTFPFVAAGIVAQKDQQVLENLQEAGHLIGLAFQVRDDILDVTADFEELGK 228
>gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
Length = 336
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + L E + ++ L A + + + L +A GGK++R L
Sbjct: 12 DEKLATALTEELQHVEEHLRSA-TSHADTVVNEASQHLANA------GGKRLRPLLTLLA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + +E H SL HDD+ MD+ +RRG P+ H + AI+ G+
Sbjct: 65 AHVGQGVNDDVRQAALVVELTHLASLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++++ + + + + ++D +
Sbjct: 123 LLFARASRLVANLGPEAVHIQAVTFERLCLGQLH-------ETMGVRDGDDPVEHYIGVL 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +L+ + GA A A ++ L +GEN+G+ FQLADD++D D K
Sbjct: 176 ADKTASLLATSALLGAKFAGADHGIQQALARYGENVGVAFQLADDIIDLTSDGDVTGK 233
>gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
Length = 397
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 73/230 (31%), Gaps = 15/230 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
E+ +D L L + L+ +R+ LGGK++R L+ + + +
Sbjct: 73 ESLAAVDARLHRELQSRY--------EALVPVLRHGTQLGGKRLRPALLLLSGAAMHADR 124
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + ++ + M + +
Sbjct: 125 TSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTSI 184
Query: 130 IISSPKTQLKD------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
++ L + Q+L IDE I +
Sbjct: 185 LLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIRG 244
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT L +C+ GA ++ +++ E FG +LGI FQ+ADD LD D
Sbjct: 245 KTAELTRVSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGD 294
>gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 788
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 12/239 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
K++E KRI+ +L + M + + A Y+L GGK++R +
Sbjct: 498 EDFRYKVEEVQKRINNVLR--IEDKDLLMG----EPVREAANYSLAAGGKRLRPVIAWFV 551
Query: 62 A-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + + ++E +H SLI DDLP+ DN RRGK VH Y A ++G
Sbjct: 552 GVEAYGMEETALMPLLRSLEYMHTASLIFDDLPAQDNAPSRRGKAAVHEVYGTAAAELSG 611
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L A E +S + + +L+ + L+ + + + ++ +
Sbjct: 612 LYLTQKAMEDQASLTSSTP-DAVLELIRYTARSTAEMCRGQAMDLEAKGKALTAGELDAL 670
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG + AI+A A Q+E + L+ F + GI FQ+ DDLLD E D L K
Sbjct: 671 CFYKTGIAFEASIIMPAILAGAEQDEIDVLKKFARHAGIAFQIRDDLLDVEGDPMLLGK 729
>gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10750]
gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS10750]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 339
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + ++++ ++++ + D + + A GGK++R L A
Sbjct: 19 DALVALVKDDLQKVNHAIVDRMHSPVEMIPQL-------AGHIIAAGGKRLRPVLTLASA 71
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L +++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+
Sbjct: 72 KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ + I S+ + LQ + + + +
Sbjct: 130 LFSRSFELMVEDGSLSVLAILSRASSVIAEGEVLQLITANDTETSE------DSYLEVIR 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL AC GA++A + E+E L +G NLGI FQL DD+LD
Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233
>gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus P2]
gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus 98/2]
gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase
gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
solfataricus P2]
gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2]
Length = 332
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L E ++ + + + ++ ++ GGK++R ++
Sbjct: 3 SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + A + AA+E +H ++L+HDD+ MDN +RRG PTVH+++ E AI+AG+
Sbjct: 56 SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMI 180
L AFE ++ L N + +I + + ++ + E + +
Sbjct: 114 YLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQM 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
K KT L + G I+ A+ + ++L +G NLGI FQ+ DD+L D L K
Sbjct: 174 IKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGK 232
>gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 322
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++ + +D ++ L + Y + GGK++R +V A F
Sbjct: 10 VADDMQAVDALIQQRLHSDVVLINQLG--------HYIINSGGKRLRPMVVLLSARAFGY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + A
Sbjct: 62 QGSYHIDIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + I ++ ++ +Q + + E I + KT
Sbjct: 120 FEMMVGVDSMRVMEILARTTNTIAEGEVMQLLNC------HEPDTTEECYLEIIRSKTAK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A + GA++ H E++ + +G +LG FQL DD+LD DL K
Sbjct: 174 LFEAATQLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 225
>gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii SDF]
gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii]
Length = 303
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 14/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185
Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ + + +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE 240
>gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ E +K ++ LD + + + + A+RY+LL GGK+I + L
Sbjct: 1 MLEKAKSVNQALD-------TAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGG 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
TA+ V A+E +H SL+ DDLP MDN IRRGKP+ H + E + A
Sbjct: 54 QESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESELARSIGSQGLVA 113
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + L + IGL+G+ I K G
Sbjct: 114 GQFL-------------DLSSEGSPEIGLEGL------------------ESIHINKAGP 142
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ + GA++ S + E LR FG +G+++Q+ DD+LD ++L K
Sbjct: 143 LLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGK 194
>gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
Length = 323
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
++++ I+ L ++ + T LL A GGK+IR V A L
Sbjct: 10 IEKDMDMINHELKQAIISAEAETTTASALHLLEA------GGKRIRPLFVCLTARLTEKP 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ ++ A + + +DN +RRG+ T+ ++ A+ G+ L +
Sbjct: 64 DQSKMKYAAVAVELI-HMASIVHDDVVDNASLRRGRETIKSRWGNHIAMYTGDYLFAKSL 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +++ K + + + + L Q D K KT L
Sbjct: 123 DYMTNIKEIEAHEMLASVTVELATGEIEQL------KSKYDVTQSIRTYLRRIKRKTALL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C GA+++ ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 177 IAVSCGLGAVISGQDAATTKKLYQFGYYVGMAFQIQDDVLDFVGSQKELGK 227
>gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes SSI-1]
gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
[Streptococcus pyogenes SSI-1]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTDQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
pyogenes MGAS2096]
gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
pyogenes MGAS2096]
Length = 290
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes serotype 4b str. F2365]
gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes serotype 4b str. F2365]
gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 220]
Length = 321
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +DN +RRG+ T+ ++ A+ G+ L
Sbjct: 60 APNADFDAVKNASVAIELI-HMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces
viridochromogenes DSM 40736]
gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces
viridochromogenes DSM 40736]
Length = 336
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLAAVEEGLFEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVASANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++ + +T I + QD +
Sbjct: 123 DFLFARASHTLADLGPEAVRVQAEAFERLVTGQI-------LETAGPQDGRDPVEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LAGKTGSLVAVSCRFGAMMSGADETTVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
Length = 348
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + + I ++ + T+ S +RYAL GK+ R L A + +
Sbjct: 29 LSDIQRLIANEMEQTERVMQREIYTEVA-LAQSVMRYALQAKGKRFRPMLHLLSAGVCDY 87
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A IE IH +L+HDD+ +D+ IRRG+ + HI + +I+ G+ L T A
Sbjct: 88 RGDFAPTAAAFIEFIHNATLLHDDV--VDSSDIRRGQASAHIIFSNAASILVGDFLYTRA 145
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ S + + +Q ++ + IDET + + ++KT
Sbjct: 146 FQLMVSSGNAAVLKTMADATNLIAAGEVMQL------ANMHNPDIDETCYYRVIELKTAV 199
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L AC+ A +A S+ + L +G+ LG+ FQ+ DD+LD D K
Sbjct: 200 LFSAACKIAAQLAGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESK 248
>gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 336
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L + + +A GGK+ R LV
Sbjct: 13 DQALEADVQSGLAAVEAGLLEATKSDVPFITD-------AAQHLVRAGGKRFRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + + +E H +L HDD+ MD +RRG P+ + ++ A++ G+
Sbjct: 66 SQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSANTRWGNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + +T I + +D +
Sbjct: 124 FLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVDHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A + + L +GE LGI FQLADD+LD D
Sbjct: 177 SGKTGSLVAVSGRFGAMMSGADERTVDILTQYGERLGIAFQLADDVLDIASDS 229
>gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB]
gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB]
Length = 317
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ +ID+ L++ + + + L +A ++ L GGK+IR +L L +
Sbjct: 5 RAILSKIDSELENYVEK---------DTNLYNASKHLLFAGGKRIRPYLSVLTYLLKRDD 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L ++E IH Y+LIHDD+ MDN RRGKPTVHI Y E TAI+AG+ L AF
Sbjct: 56 ISEVLAPAISVELIHNYTLIHDDI--MDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S +++ L+ ++ ++EF + + KTGAL
Sbjct: 114 EALS---NIGDSKKALEVLKVLSKACVEVCEGQTDDMEFENEFPTLEEYLSMISKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GAIMA S E+E L + + +G+ FQ+ DD+LD D
Sbjct: 171 IVAPIEIGAIMAECSSEEREALYNYAKRIGMTFQIQDDVLDLIGDQK 217
>gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
Length = 290
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
++I+ L L L A+ Y+L GGK++R L +
Sbjct: 9 KEQIENYLSKSLAA------DVDQATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTIND 62
Query: 72 AL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L R +A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT AF+
Sbjct: 63 DLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQW 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + L L+ + ++ + + + Q+ + + KTG L+
Sbjct: 123 VADNHLPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIR 182
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+A +G IM S K+ L FGEN G+ FQ+ DDL+D E++ K
Sbjct: 183 YAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDILSTTEEMGK 231
>gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
266]
gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
266]
Length = 324
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
++ + + N + RY L GK+IR LV A + + + R +E
Sbjct: 15 EIFQERYKSVLHSKNTLVDKVTRYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVE 74
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H +LIHDD+ +D +RRG +++ + +++ G+ LL+ K
Sbjct: 75 LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSL 132
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+I S+ + ++ LQ + I E + KT +L+ +C GA A
Sbjct: 133 HIVSEAVRRMSEGEILQI------QKTRSLDISEEDYLSVISDKTASLIASSCAMGAASA 186
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +++ +GE LG+ FQ+ DDLLD D K
Sbjct: 187 TEDEAAIAKMKNYGEYLGLAFQIRDDLLDYTGDSNK 222
>gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 358
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 87/238 (36%), Gaps = 18/238 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L L ++ + + + + + + A GGK++R L A
Sbjct: 35 DLSDYLGDDMAACNRAIVERMDSPVALIPQL-------AAHLVAAGGKRLRPLLTLAAAR 87
Query: 64 LFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + V A ++ +D +RRG + + + +++ G+
Sbjct: 88 LCDYPAGPEHQRHVSLAACVEFIHTATLLHDDVVDESLLRRGLASANAVFGNKASVLVGD 147
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +F++++ + I S ++ LQ D Q +
Sbjct: 148 FLFARSFQLMTDDGSLKVMAILSSASATIAEGEVLQM------STQNDLSTSVEQYLEVI 201
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL AC GA++A + E+ L FG NLG+ FQL DD LD D L K
Sbjct: 202 HGKTAALFAAACRVGAVVAERPEAEELALESFGTNLGMAFQLVDDALDYAADQAVLGK 259
>gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
Length = 321
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 10/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+QE RI A+ + T H A GGK++R L A
Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ ++E +H +L+HDD+ +D+ +RRG H + ++AG+ LL A
Sbjct: 61 DDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAHTVFGSTATVLAGDALLALAN 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I++ S+ ++ ++ + I KT +
Sbjct: 119 LIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR------DTYIDIITGKTAWM 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ +CE GA+ A AS+ FG +LGI FQ+ DD LD D K
Sbjct: 173 LRASCELGALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDFADRADTGK 222
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 12/224 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
T++ D+ + + ++ +++ A+RY++L G K+ + LF N L A
Sbjct: 49 TLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPT 108
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SLIHDDLP MD+ RRG P H + AI+AG+ L F+ I S
Sbjct: 109 ACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHT 168
Query: 136 TQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ +++ + +G GM GQ LD++ V +Q+ K G + +
Sbjct: 169 PSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEGGP---NAVDFVQEKKYGEMGECSA 225
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
GA++A AS E + +R +G +G+++++ DD+L KK
Sbjct: 226 VCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDIL-----EAKK 264
>gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
Length = 291
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ ++ + Q + L A+ Y++ GGK+IR +L+ E V
Sbjct: 4 QEKLTLVESAIEKF------YGDKQVSSSLREAVLYSVHAGGKRIRPYLLLEVLESLQVP 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 ITIAHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + I LSL+ ++ + + ++ ++ I KTG
Sbjct: 118 YALIAQADLPNEIKIDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELTPELQAKLKTVGELVGLAFQVRDDVLDVTASFE 225
>gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232]
gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232]
gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
Length = 290
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + +Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLSQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
L + +I+ LD+ + Q ++ A+RY++L G K+ +
Sbjct: 48 FDLKTYCANLMVQINQKLDE-------AIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCIS 100
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
LF + L A A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG
Sbjct: 101 ACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAG 160
Query: 121 NGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ L F I S ++ +++ + ++G GM GQ LD++
Sbjct: 161 DALFPLGFRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVG--- 217
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEED 233
IQ+ K G + + G +A A +E ERLR +G +G+++ + DD+++ E D
Sbjct: 218 FIQEKKFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGD 276
>gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 321
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 17/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L +++ + + ++ L ++ QT + + T+ + LL+A GGK++R L A
Sbjct: 3 ELFDEIKGDLQVVEEELRAVV-QTQNPLLTETSTHLLNA------GGKRLRPALCLFGAK 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+N N L + A+E IH +L+HDD+ +D RRG PTV ++ + G L
Sbjct: 56 FYNYNLEKVLPLAVALELIHMATLVHDDV--VDASMTRRGIPTVKAKWGNSISTHVGTYL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ ++S + + +Q + + + K+
Sbjct: 114 FAKSLILLSKYEKTPIIARVLSSISVKMCEGEIQQIS-----SSFNICQSIKEYLHRIKL 168
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L+ + + GA A + LR +G N+G+ FQ+ DD+LD E L K
Sbjct: 169 KTALLIAASIQLGAAACGAPVSIHLPLRRYGHNIGMAFQITDDILDMVAEESQLGK 224
>gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate
Synthase From Rhodobacter Capsulatus
gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate
Synthase From Rhodobacter Capsulatus
Length = 297
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L +L+E ++T A+ + L A YA GGK++R+FL E A+
Sbjct: 2 SLSERLKEVQDAVETA-------XAAAIGRLPAGDLRDAXAYAAQGGKRLRAFLAIESAA 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ A A+E +H YSL+HDD P DN +RRG PTVH ++D+ TA++AG+ L
Sbjct: 55 IHGISXAQAXPAALAVEALHAYSLVHDDXPCXDNDDLRRGLPTVHKKWDDATAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T AFE+ + P +N + + + + G + + + I ++
Sbjct: 115 QTLAFELCTDPVLGSAENRVALVAALAQASGAEGXVYGQALDIAAETAAVPLTLDEIIRL 174
Query: 184 KTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ G FA ++GAI+A A + L + LG+ FQ+ADD+LD E + K+
Sbjct: 175 QAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEGNEEAAGKR 231
>gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 4b H7858]
gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes Clip81459]
gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J2-064]
gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J1-175]
gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes FSL N1-017]
gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 4b H7858]
gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
R2-503]
gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J1-194]
gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes FSL N1-017]
Length = 321
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +DN +RRG+ T+ ++ A+ G+ L
Sbjct: 60 APNADFDAVKNASVAIELI-HMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204]
gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204]
Length = 278
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+I+ +L++ + SA+ Y+L GGK+IR L+ ++V+
Sbjct: 2 QIELLLENYIKSLPDSTTK-------SAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGN 54
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E IH YSLIHDDLP+MDN +RRG PT H Q++E TAI+AG+GLLTYAFEI +
Sbjct: 55 PFACALEMIHTYSLIHDDLPAMDNDDLRRGLPTCHKQFNEATAILAGDGLLTYAFEIAAG 114
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ +LS L+ + + ID + I + KTG L+
Sbjct: 115 SNENSGTVLKCISILSKMAGPSGMVYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPL 174
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+A + + + G +LG+ FQ+ DD+LD E
Sbjct: 175 LIACTLAKH-EEDISAWKKIGFSLGLAFQIQDDILDIE 211
>gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
1942]
gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
1942]
Length = 320
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 1 MKFKMAYSFLNDDIDIIEKELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
N + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 53 LLSGMFGNYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 111 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 165 RRIKRKTAILIAVSCQLGAIASGADEKVHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
Length = 320
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L+ + ++ +D + ++ ++T H + SA R L GGK+IR V A
Sbjct: 2 SLKRLYRHMNREIDQIDQFLSTRVRTDHP-VIESASRQLLDAGGKRIRPAFVLLSAGFGE 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +V +++E IH SL+HDD+ +D+ +RRGKPTV +YDE A+ GN L
Sbjct: 61 TKDIRLTKVASSLELIHMASLVHDDV--IDDAMLRRGKPTVMERYDETVAMYTGNTLFGE 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A ++S + I + M + Q D + + KT
Sbjct: 119 AIRLVSEIDSPEVMRIMADTMERICVGEINQI------QDQYEWGQSPKRYLDRIARKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L+ +C +GA+++ AS ++L FG ++G+ FQ+ DDLLD
Sbjct: 173 LLIETSCAAGAVISGASPQTVKQLSLFGYDIGMAFQMTDDLLDFTA 218
>gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Thiomonas sp. 3As]
Length = 336
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ E+ +R+D + L + + T Y + GG K++R L+ +
Sbjct: 24 ITEDMERVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLVSQALGF 75
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + A
Sbjct: 76 RGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGDFLYSRA 133
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ S + +I + + LQ + D +DE + + + KT
Sbjct: 134 FQMMVSVGSMRILDILADATNVIAEGEVLQLLNM------HDPEVDEQRYLQVIRFKTAK 187
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A GA++A A N +E + G + G FQL DDLLD +L K
Sbjct: 188 LFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 239
>gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 334
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 10/230 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
+ +Q+N I+T L L+ H +TQ ++ L + + YA GG K++R LV A ++
Sbjct: 7 TTIQDNLSYIETELQTLVA----HCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMY 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ ++ A+E H ++L+HDD+ MD+ +RR +P+V Q+ AI+ G+ +L+
Sbjct: 63 GKDRADFIKAALALEIYHNFTLLHDDV--MDHSEMRRNRPSVPAQFGIAQAILTGDAMLS 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A+++ L+ I + Q M + + + KT
Sbjct: 121 LAYKLTQEYPLALQPAIMGVFNRMSQDIMVGQQMDMDFETRSDVTL---AEYERMIRKKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A E GA +A ++ L G N G+ FQL DD LD D
Sbjct: 178 AVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGDEA 227
>gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 1816]
Length = 312
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 1 MQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLAPNA 54
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A++ + + + +DN +RRG+ T+ ++ A+ G+ L +
Sbjct: 55 DFDAVKNASVAIELI-HMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ K + S + + L+ Q D + K KT L
Sbjct: 114 EYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALL 167
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 168 IAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 218
>gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330]
Length = 291
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEQLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ + + ++A A Q +++LR GE LG+ FQ+ DD+LD K
Sbjct: 178 LLTYPFVAAGLIAEAEQPVQDKLRRIGELLGLAFQVRDDILDVTASFEK 226
>gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 322
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 14/233 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+L E I +++ L + T A GGK++R L A
Sbjct: 2 QELLEYLGAIQPKVNETLAAETGTLNTMVQPV---ATHVLSAGGKRLRPLLAILFARALG 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++E +H +L+HDD+ +D+ +RRG P H + I+AG+ LL
Sbjct: 59 RGGDDIYPLACSVELLHSATLLHDDI--IDDAALRRGLPAAHTLFGSTRTILAGDALLAL 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A I+S ++ ++ + + I K KT
Sbjct: 117 ANLIVSRYGDTRLTECIARAIIETATGEIAEIEYLRSTG------HPQETYIEIIKGKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
++ +C+ GAI A A+ +++ FG NLGI FQ+ DD LD + K
Sbjct: 171 WMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGK 223
>gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus
pyogenes M49 591]
Length = 290
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F ++ A++ + +++L G +G FQ+ DD+LD DL K
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228
>gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
Length = 324
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 15/223 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
++ D + T+ L + I Y L LGGK++R L +F+V+ +L
Sbjct: 8 QELISDYFSELH---LTKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVDCKKSLAA 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H +SL+HDD+ MD+ +RRG TVH +++ T I++G+ +I + +
Sbjct: 65 ATAIEIFHNFSLVHDDI--MDDAPLRRGNETVHEKWNINTGILSGD------AMLILAYQ 116
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192
+ + L+ + + GQ D+ E D+ + + + KT L+ A
Sbjct: 117 HFEEYEPKIFRDLAKLFSKTALEVCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVGAA 176
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GAI+A S + FG NLGI FQL DD LD +
Sbjct: 177 MKMGAIVAQTSTENANLIYDFGLNLGIAFQLQDDYLDAFGNPE 219
>gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 324
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S+ +++ I+ L+ + ++ +++ Y GGK+IR V
Sbjct: 5 DIYSRKKKDIAFIEKSLERSIDVDLPTLRD-------ASLLYLKAGGKRIRPVFVLLAGE 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + +E IH SL+HDD+ +D+ RRGK TV ++D A+ G+ +
Sbjct: 58 FGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAETRRGKATVRSKWDNRIAMYTGDYV 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +++ K I S+ M+ ++ Q + K
Sbjct: 116 YAKALTLVTELKNPAIHQIMSKAMIEMSIGEMEQI------RLFFEHGQTLRDYLRRIKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KT L+ +C+ GA+ A AS+N +RL FG +G+ FQ+ DD+LD K+
Sbjct: 170 KTALLIAVSCQLGAMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVG-TEKQ 222
>gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 330
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + +D ++ L T + +Q + ++SA GGK++R L+
Sbjct: 11 TATVLDLIAGDMVEVDRVIARRL-DTGVPLVSQVSQYIISA------GGKRLRPALLLLM 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 64 SGALGYTGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRATANESFGNPASVLVGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AF+++ I ++ + LQ M D +DET +
Sbjct: 122 FLYSRAFQMMLDANNIRVMEILAEATNVIAEGEVLQLMNM------HDASLDETAYLRVI 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L + A++A + +E +G+ LG FQ+ DD+LD D K
Sbjct: 176 RSKTAKLFEASTRLAAVLAGVTPEVEEACATYGQALGTAFQVIDDVLDYAGDAHETGK 233
>gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
Length = 298
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 122/243 (50%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L+E + + + + + + YALL GGK++R FL+
Sbjct: 1 MNSDFQVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N + ++ IE IH YSL+HDDLP++DN RRGK T H + E AI+
Sbjct: 55 TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114
Query: 120 GNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
G+ LLTYAF ++S L + ++ + G+ GM+GGQM+DI+ E
Sbjct: 115 GDALLTYAFYMLSQKNLNLLSFEQITNIISKTSAYAGINGMIGGQMIDIESENKKINLET 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ I K KTG L+ E I+A S++++ L + E +G+ FQ+ DD+LD E +
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEE 234
Query: 234 LPK 236
L K
Sbjct: 235 LGK 237
>gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott
A]
Length = 324
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +DN +RRG+ T+ ++ A+ G+ L
Sbjct: 63 APNADFDAVKNASVAIELI-HMASIVHDDVVDNADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246]
Length = 348
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + S + E + I D L L+ +R+ GK++R L+
Sbjct: 33 MFGPIASDIAEA----ERIFDRTLAPHKGPFGP-----LVEHLRHYR--GKRLRPALLLL 81
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + AA+E IH +L+HDD+ +D +RR PT + +I+ G
Sbjct: 82 TAEACGGVAPAHHTLAAAMEMIHTATLVHDDV--LDEADVRRHAPTFRAGWGNKVSILLG 139
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L T+AF + S+ + ++ + Q+ + + + E F +
Sbjct: 140 DMLFTHAFHLTSTVDGR-------ACQITGEVTNRVCAGELRQVTERGNLELSEADYFAV 192
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL GA+ A AS+ ++ +G ++G+ FQ+ADDLLD
Sbjct: 193 IDGKTAALTECCGRLGALYAGASEEVAAKMASYGRSVGLAFQIADDLLDLTGTEE 247
>gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1]
Length = 321
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 10/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+QE RI A+ + T H A GGK++R L A
Sbjct: 1 MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ ++E +H +L+HDD+ +D+ +RRG H + ++AG+ LL A
Sbjct: 61 DDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAHTVFGSTATVLAGDALLALAN 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I++ S+ ++ ++ + I KT +
Sbjct: 119 LIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR------DTYIDIITGKTAWM 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ +CE GA+ A AS+ FG +LGI FQ+ DD LD D K
Sbjct: 173 LRASCELGALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDFADRADTGK 222
>gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
Length = 322
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ L + + L GGK++R L A + +
Sbjct: 14 AINRYLESATETLNPMVQPVVR---HVLLAGGKRLRPLLTILTARAMGYRADDVYPLACS 70
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H +L+HDD+ +D +RRG+ + H+++ I+AG+ LL A +++
Sbjct: 71 LEFLHSATLLHDDI--LDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRLVAEYDNPE 128
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ S+ +L L+ + F I KT L+ +C+ GA+
Sbjct: 129 LTKLLSEALLQTATGEILEIAHLRDVDLPL------DTYFSIITGKTAYLIQASCQCGAV 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A AS + G ++G+ FQL DD LD
Sbjct: 183 LAGASPRLIQAAADLGHHIGVAFQLVDDALDYTS 216
>gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum
SCRI1043]
gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum
SCRI1043]
Length = 323
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLEQITTLTTQDMAAVNKVILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALAYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S +I+A A+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
Length = 275
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALR 74
+ L ++ +++ + +D + I YAL GK++R L A+ NV + + +
Sbjct: 8 NRYLPEINNDLSNYFADRDDD-IFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIE 66
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E +H YSL+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+
Sbjct: 67 AATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL 126
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+R L+L L QD+ + I MKTGALM +A
Sbjct: 127 SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAAT 186
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
+G I+A S ++ L +G NLGI FQ+ DDL D ++D KK
Sbjct: 187 AGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 231
>gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
Length = 332
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +Q + + +D ++ L ++T + + S GGK++R +V A
Sbjct: 13 ESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQS-------GGKRLRPLVVLLTA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + +D RRG+ T + + +++ G+
Sbjct: 66 RACGYEQDVEHQELATVIEFIHTATLL-HDDVVDKSTQRRGQKTANALWGNSASVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+I++ I + ++ Q M + D IDE + + +
Sbjct: 125 LYSRAFQILARRSNVPIMKILATTTNQISEGEVWQLM------NQNDPDIDEVTYYEVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A E GAI+A ++ ++ + FG +LG+ +Q+ DDLLD +D
Sbjct: 179 RKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDAS 231
>gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 339
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 16/237 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + R++T + + + N + S GGK++R L CA
Sbjct: 17 NDLVALVADGMARVNTTILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACA 69
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L T V A ++ +D +RRG+ I++ +++ G+
Sbjct: 70 QLCGYAGATEGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNEASVLVGDF 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q + ++ DE + +
Sbjct: 130 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TNAKNLETDEAAYLAVIR 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L ACE G ++A + E+ R +G NLGI FQL DD+LD +L K
Sbjct: 184 GKTAELFAAACEVGPVLAGRPEAEQAAARSYGMNLGIAFQLIDDVLDYGGTSAELGK 240
>gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
Length = 323
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A N
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAILVARALNYQGN 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + S + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A+AS+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLANASEEQEVALQNYGRYLGTAFQLIDDLLDYSSDGVTLGK 225
>gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105]
gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105]
Length = 300
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 115/237 (48%), Gaps = 13/237 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
+ E + +L D L Q + L +A+ YALL GGK++R+ LV
Sbjct: 10 NWFDETRAGFEAVLADKLKQFEGP-----SSELNAAMEYALLDGGKRLRAMLVFAAGYAV 64
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+IE +H YSL+HDDLPSMDN +RRGKPT H+++ E A++AG+ L T
Sbjct: 65 ETPTSQLNDAACSIEAMHAYSLVHDDLPSMDNDVLRRGKPTCHVKFGEAFALLAGDALQT 124
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM 183
AF+ ++ Q +R Q + +L GLQGM GQ +D+ +
Sbjct: 125 AAFQWLA-ESNQGSVQVRMQQIAALASAAGLQGMAAGQAIDLAHVGKPMDLQSLATMHAR 183
Query: 184 KTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDC--EED-LPK 236
KTG L+ + G + A S EK L + LG+ +Q+ DD+LD D L K
Sbjct: 184 KTGDLITASVRMGYVSNATLSAVEKNGLEAYAHCLGLAYQVIDDILDVESTSDVLGK 240
>gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133]
Length = 293
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+ KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
grylli]
gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
grylli]
Length = 322
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + + ++++ +D +++ L + + S GGK++R +
Sbjct: 1 MNLAPIVALVKKDLDEVDALINRCLYADIPLIPQLAKHLINS-------GGKRLRPLIAL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A F R+ A++E IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKAFGYQGKEHRRLAASLELIHGATLLHDDV--IDGSVLRRGKKTANSLWGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L + AF++IS + +L + LQ + + +
Sbjct: 112 GDFLYSRAFQLISQINNSRVLTSLADATNTLAQSEVLQLINCYNVDVDEAYC------LK 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KTG L A E A++ + E + +G +LGI FQL DD LD D L K
Sbjct: 166 VIQGKTGVLFSIAAEQPAMLTERPEAEISAMAHYGMHLGIAFQLIDDSLDYSGDPQQLGK 225
>gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
NSW150]
Length = 322
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++ ++ ++ + + + + + S GGK++R LV +
Sbjct: 4 DSIRALINDDFNAVNNLIINKIESQIGLIDKMSHHMIES-------GGKRLRPLLVLLTS 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A +E H +L+HDD+ +D +RRG+ T + + +I+ G+
Sbjct: 57 NACGYQGQDHIDLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANNIWGSKASILVGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T + E++ + ++ L ++ Q + + + + F + +
Sbjct: 115 LFTQSIELMVDINNPEVLKLFARTALEISCGEVKQL------TNRHNPALTFEEYFDVIR 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A G I++++S+ + L +G +LG FQL DD LD D
Sbjct: 169 AKTALLFAAAACIGPILSNSSKEMQNALYAYGLHLGNAFQLIDDALDYCSDAK 221
>gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)]
gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor
A3(2)]
gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 336
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLVAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++D A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
7420]
Length = 323
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 88/224 (39%), Gaps = 9/224 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
++ L LL + ++ + L +A + GGK++R +V A ++
Sbjct: 9 APVEADLY-LLTENLKNLVGARHPILYAAAEHLFGAGGKRVRPAIVLLIARATVLDSDIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ ++ A++AG+ L + +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDESSVRRNVPTVNSMFNNRVAVLAGDFLFGQSAWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + SQ++ + QG+ + KT +L+
Sbjct: 128 ANLNNLEVVKLLSQVIKDMAEGEIQQGLTRFEASTTI------DTYLEKTYKKTASLIAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +S +++ S E L +G +LG+ FQ+ DD+LD
Sbjct: 182 SSKSAGLLSGVSAEVAENLYRYGNHLGLAFQIVDDILDFTASTE 225
>gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321]
gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321]
Length = 291
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLALEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 287
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 10/227 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
+ R++ L L RL SA+ Y+LL GGK++R L A + ++ ++
Sbjct: 3 AARVEGYLATCLA------GRGIPPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMS 56
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AAIE IH YSLIHDDLP+MD+ +RRG+P+ H Q+DE TAI+AG+GLLT AF+++
Sbjct: 57 VMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLM 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGAL 188
+S + + ++ G GM+GGQ LD+ D+ + + MKTGAL
Sbjct: 117 ASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGAL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +C +GA++ A + E++ +G +G FQ+ DD+LD D
Sbjct: 177 IRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEA 223
>gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
Length = 327
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ ++++ S+ I+ ++D L + L A + + GGK++R L
Sbjct: 9 DEILKEIKKRSEVINKAMEDFLD-------LGEPEELYKASYHLIKAGGKRLRPVLTLLS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L AIE IH ++LIHDD+ MD RRG PTVH + E TAI+AG+
Sbjct: 62 CEAIGRDWKPILPSAIAIELIHNFTLIHDDI--MDKDEYRRGVPTVHRLFGEATAILAGD 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AFEI+S + ++ IR+ +++ +G + +D+ +
Sbjct: 120 TLFAKAFEILSKCNVEAENVIRAVEVIADVCVKICEGQYMDMEFEKRDDVSV-EDYLKMV 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG L+ +C A++ + + L FG N GI FQ+ DD+LD
Sbjct: 179 EKKTGVLIACSCSIPAVLYG-EEKYVKPLWDFGLNCGIGFQIHDDVLDLVG 228
>gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330]
Length = 324
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK++R L + + A +E IH +L+HDD+ +D +RRG+ T
Sbjct: 44 AGGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTA 101
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ + A++ G+ L T AF+++ + + + + +Q M G +
Sbjct: 102 NNLFGNAAAVLVGDFLYTRAFQLMVGSGSLKILEVMADATNIIAEGEVMQLMNIGNVDIT 161
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ Q + + KT L A + GAI+A A+ +++ L+ FG ++G FQ+ DD+
Sbjct: 162 E------AQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTAFQIIDDV 215
Query: 228 LDCEE 232
LD
Sbjct: 216 LDYSG 220
>gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
Length = 336
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALETDVQAGLAAVEAGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 ASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVESANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +D +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVAHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A ++ + L +GE LG FQLADD+LD D
Sbjct: 176 IAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLADDVLDIASDS 229
>gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
Length = 327
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 13/234 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
L L E +D + ++L L A R+ GGK++R LV
Sbjct: 2 ETLTRYLSEFRPLVDKKIMEVLE--------GSPKELYEAARHLPSKGGKRLRPALVLLV 53
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
AL AA+E +H ++L+HDD+ MD +RRG PTVH+ Y E AI+AG+
Sbjct: 54 NKALGGEVEGALPAAAAVELLHNFTLVHDDI--MDRDELRRGVPTVHVLYGESMAILAGD 111
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A+E + +L+ + +G + + + + + +
Sbjct: 112 LLYAKAYEALLQSPQPPDLVKEMTEVLTWSAVTVAEGQAMDMEFEKRWDVTE-EEYLEMI 170
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL + GA+ A+ + K+ ++ FG LG FQ+ DD+L D
Sbjct: 171 EKKTGALFGASAALGALTANK-REVKDLMKEFGLILGKAFQIKDDVLSLLGDEK 223
>gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
Length = 323
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 9/219 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GGK+IR +V + ++ R
Sbjct: 11 VENDLH-LLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDLEITSR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RR PTV+ +D A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ QG+ KT +LM +
Sbjct: 130 LDNLQVVKLLSEVIRDFAEGEIFQGINRFDTSLTL------EAYLDKSYYKTASLMANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+S AI++ AS + L +G+ LG+ FQ+ DD+LD
Sbjct: 184 KSAAILSDASAEVIDSLYNYGKYLGLAFQIVDDILDFTS 222
>gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens]
Length = 336
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLVAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++ A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEASVRRGVPSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
pseudotuberculosis 1002]
Length = 339
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N L + ++ +L L + + L +A GGK+ R
Sbjct: 20 NPALNEDISAGMTCVEELLQKELCVGEDFI-VEKVKHLANA------GGKRFRPMFALLA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A + + + ++ MD RRG + + +++ AI+AG+
Sbjct: 73 SQYGDHPVSEDVIKAAVVVEMTHLATLY-HDDVMDEAAKRRGVESANARWNNSVAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + +++ T S+ L + + G+ I+ +
Sbjct: 132 ILLAHVSRLMADLGTDTV-RHFSETFGDLVTGQMRETIGVGEGDPIEHYMA-------VI 183
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + A+ + E LR +G +G++FQ+ DD++D D
Sbjct: 184 REKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIFSDSE 237
>gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
44728]
gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
44728]
Length = 322
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ L + + + I+ L +++ + L A + L GGK+ R L
Sbjct: 4 VDPELEASVSRRLEVIEKRLQEVIDSGDAF--------LTEAASHVLKAGGKRFRPMLSV 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + +E H +L HDD+ MD +RRG P+ + ++ AI++
Sbjct: 56 TAAHFGDPDAHGVIESSLVMELTHLATLYHDDV--MDEAAMRRGAPSANSRWSNSIAILS 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L A E+++ ++ + I + + +
Sbjct: 114 GDYLFAVASELVAELGSETVREQARTFSRLVHGQI-------AETVGPPEGVDPVDWYLR 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTG+L+ A GA A A + + + +GE +G+ FQL+DDLLD D K
Sbjct: 167 VLTDKTGSLIATAARLGAQFAGAPTSVVDAVAEYGETIGVAFQLSDDLLDIASDGDTSGK 226
>gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + L S + Y + GG K+IR +
Sbjct: 1 MNLEQITELTAQDMADVNATILQQLNSEVSLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLSARALNYTGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ + S+ + LQ M ++ ++
Sbjct: 111 VGDFIYTRSFQMMTSLQSLRVLELMSEATNVIAEGEVLQLMNVNDPNITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI+A A+ ++ L+ +G LG FQL DDLLD + D L
Sbjct: 166 -VIYSKTARLFEAAAQSSAILAGATHEQEIALQDYGRYLGTAFQLIDDLLDYDADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 799
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
+Q K +D IL + TAS + T+ L+ Y+L G GK++R L
Sbjct: 506 EAFVELVQTARKHVDAILP--ITSTASSLITEDP-LLVDTANYSLEGSGKRLRPILAWVM 562
Query: 62 A-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++ ++ + A+E +H SLI DDLPS DN RRGKPT+H ++ A + G
Sbjct: 563 GVQVYGLDPAALSPLFRALEYMHTASLIFDDLPSQDNSPSRRGKPTLHEVHNSAIAELTG 622
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L+ A E +S K +++ + L G M L+ + + + ++ I
Sbjct: 623 IFLIQKAVEEQASLKGFDNESVLALLQYLSRKA-GEICMGQAMDLNAKGKVLTVEELDRI 681
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG + AI+A A++ E L+ F + GI FQ+ DDLLD E D L K
Sbjct: 682 CFYKTGIAFEACLVAPAILARANETEIAVLKNFAYHTGIAFQIKDDLLDGEGDPRLLGK 740
>gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
Length = 336
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQAVEADVQAGLAAVEEGLLEATKSEVPF--------ITEAAQHLVKAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 AAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
Length = 309
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
+D ++ L + + Q + +++A GGK++R L+
Sbjct: 3 EVDHVIAQRLTSSVP-LVAQISQYIIAA------GGKRLRPALLLLICGALGYRGNHRFS 55
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F+++
Sbjct: 56 LAAVVELIHTATLLHDDV--VDASTLRRGRATANQTFGNPASVLVGDFLHTRSFQMMVEA 113
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S+ + LQ M D +DE + + KT L +
Sbjct: 114 GNMRIMEVLSEATNVIAEGEVLQLMNM------HDASLDEAGYLQVIRSKTAKLFEASAR 167
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + +E +G+ LG FQ+ DD+LD + +
Sbjct: 168 LGAILAESPPQIEEACATYGQALGTAFQIIDDVLDYDGNTA 208
>gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.]
Length = 326
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 4 GLPSKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
L +L ++ I+ L D L + L GGK++R L+
Sbjct: 3 DLKQELLSIVGKDLAEIEVALTDNLTPYLDIVSDVAKHILF-------AGGKRLRPLLMV 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + N E +H +L+HDD+ +D +RRGKP + + T ++
Sbjct: 56 LSARICNYKGGYDKVFSTIFEYLHAATLLHDDV--IDGAELRRGKPVANSIWKNSTVVLT 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL I ++ + I +++ +++ Q + G + + +
Sbjct: 114 GDFLLARGLSIAAATEKPSVIKIVAEITENMSQGEIEQLLRKGDINLTE------EEYRK 167
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L AC A +A+AS+ E++ + +G NLG+ FQ+ADDLLD D
Sbjct: 168 IIWRKTAVLFQGACRISARLANASKREEKAVSNYGYNLGMAFQMADDLLDYTLDTK 223
>gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 342
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + ++ + I+ I+ D + + + + S GGK++R L A L
Sbjct: 24 LLALVADDLEAINRIILDKAVSDVEMIPELAHHLIDS-------GGKRLRPMLALASAKL 76
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+R +A+E +H +L+HDD+ +D RRG+ T + + +++ G+ LL
Sbjct: 77 CGYGGNGHIRTASAVEFMHTATLLHDDV--VDESATRRGRKTARMIWGNQASVLVGDFLL 134
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF++ + I S ++ +Q ++ E I K
Sbjct: 135 GQAFKMFVDVGSLPVLRIMSNAAATIAEGEVMQL------AAAKNTSTTEDDYLAIINAK 188
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T AL A ESGA + E+ LR +G+NLG+ FQL DD LD D L K
Sbjct: 189 TAALFSAAAESGAALTQRPPEEQSALRSYGKNLGLAFQLVDDALDYAGDSSRLGK 243
>gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
Length = 336
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L D + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLAAVEAGLLDATKSEVPF--------ITEAAQHLVSAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 ASQFGDPDAPGVVPAAVVVELTHLATLYHDDV--MDEADVRRGVESANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQILETAGPRDGRDPVDHYMD-------V 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+MA A ++ + L +GE LGI FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVAGRFGAMMAGADESVVDILTQYGERLGIAFQLADDVLDIASDS 229
>gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47]
Length = 326
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 73/230 (31%), Gaps = 15/230 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
E+ +D L L + L+ +R+ LGGK++R L+ + + +
Sbjct: 2 ESLAAVDARLHRELQSRY--------EALVPVLRHGTQLGGKRLRPALLLLSGAAMHADR 53
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + ++ + M + +
Sbjct: 54 TSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDVLDKAATRRHVPTINARWNDDTSI 113
Query: 130 IISSPKTQLKD------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
++ L + Q+L IDE I +
Sbjct: 114 LLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEGELRQVLGRDWLDIDEETYLDIIRG 173
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT L +C+ GA ++ +++ E FG +LGI FQ+ADD LD D
Sbjct: 174 KTAELTRVSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGD 223
>gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus
curdlanolyticus YK9]
gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus
curdlanolyticus YK9]
Length = 325
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
K++ + I+ L+ + + M L GGK+IR V
Sbjct: 9 KMKGDLNEIEAELERAITSDHTLMTETSVHLLK-------AGGKRIRPIFVLLSGKFGQY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +E IH SL+HDD+ +DN RRG+ TV ++D A+ G+ + A
Sbjct: 62 RLDVMKNIAVPLELIHMASLVHDDV--IDNAETRRGQLTVKSKWDNRIAMYTGDYIHGKA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I S+ M+ + Q D + Q + + KT
Sbjct: 120 LTVATKLDNPRIHQILSKAMVEMCIGEMEQI------RDFFNTEQSVRQYLLRIRRKTAL 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L+ +C+ GA+ A + RL FG N+G+ FQ+ DD+LD K+
Sbjct: 174 LIAISCQLGALAAETDEKYANRLYRFGYNVGMAFQIRDDVLDLCG-TEKQ 222
>gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 336
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALETDVQAGLAAVEAGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 ASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVASANARWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +D +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A ++ + L +GE LG FQLADD+LD D
Sbjct: 176 IAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLADDVLDIASDS 229
>gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 292
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL--FNVN 68
K+I+ +L S + + L ++RY+L GGK+IR L+ E + N +
Sbjct: 5 IIKQINELL------LQSIPLSPLDTNLEESMRYSLEAGGKRIRPLLLIETLKMLSNNSD 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ L+ A+E +H YSLIHDDLP+MDN RRGK T H Y E A++AG+ LLT AF
Sbjct: 59 YSKGLQTALALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGA 187
+IS+ + + + L + G + + + I K KTGA
Sbjct: 119 HLISTDSLLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGA 178
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ +A + + + L + E+LG+IFQ+ DDLLD D L K
Sbjct: 179 LLTYAIMAAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGDEKNLGK 230
>gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 323
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + L +A + GGK+IR +V + ++ R
Sbjct: 11 VEADL-RILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLDQGITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH + AI+AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ + +I+++ KT +L+ +
Sbjct: 130 LDNLQVVKLLSEVIMDLATGEIQQGLNRFDASISIETYIEKS------YYKTASLVANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
++ +++ S E L +G +LGI FQ+ DD+LD D L K
Sbjct: 184 KAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTSTTDTLGK 229
>gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
Length = 326
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Query: 9 LQENSKRIDTIL----DDLLLQTASHMQTQHND--RLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + + + I+ +DLL + +D + Y + GGK++R ++
Sbjct: 1 MSQVAAAVQRIIAPISEDLLAVDREVIDDLQSDIPLIKKISDYIVTAGGKRMRPIVLMLI 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + IE +H SL+HDD+ +D +RRGKPT ++ AI+ G+
Sbjct: 61 ARALGYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAAAILTGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + AF+++ + I + + ++ +Q + +I D +DE + F +
Sbjct: 119 FMYSRAFQLMVRTQNLRICEIVAGAVNRVSEGEVIQLL------NIHDTTLDEARYFDVI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG L A +++A AS+ ++++ + LG FQ+ DD+LD
Sbjct: 173 ERKTGVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223
>gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
Length = 318
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 9/220 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D+ L I Y L GGK++R LV +F + T AIE
Sbjct: 4 DIENSIRRIDWHIDPVSLYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIE 63
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
H ++L+HDDL MD+ RR KPTVH++++ TAI++G+ +L A+E ++ +
Sbjct: 64 IFHNFTLLHDDL--MDDSPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKYWA 121
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ + Q M + + + F + ++KT L+ + ++GAI+A
Sbjct: 122 KVLPVFTQTALEVCEGQQ---FDMDFETKDNVTIDEYFRMIRLKTAVLLACSLKTGAIIA 178
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
AS+ ++ + G +G+ FQL DD LD L K+
Sbjct: 179 DASERDQRLIYDLGIAIGMAFQLKDDYLDTYGTFETLGKR 218
>gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39]
Length = 323
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 9/222 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GK++R +V + +H +
Sbjct: 11 VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ SQ+++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQGLNRFDTSLSI------EAYLEKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ +++ S E L +G N+G+ FQ+ DD+LD
Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDILDFTGSTE 225
>gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
Length = 320
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 16/228 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVN 68
+E K I+ L + + N L S GGK++R LV + L N
Sbjct: 6 REVLKEIEERLSKYMDSEVEFILKIGNYILDS-------GGKRLRPVLVLTFSKLLKGEN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+E +H SL+HDD+ +D RRGK + + T ++ G+ + A
Sbjct: 59 EERDYPIAVAMEYLHTASLLHDDV--VDGAETRRGKAAANRVFGNDTTVLTGDYMYANAL 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ S S + ++ L+ G + + E F I + KT L
Sbjct: 117 YLFSVYGDIDMIRNVSDAVKKMSEGQLLELKKIGDID------MREEDYFRILEGKTAVL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G + S +K+ +G ++GI FQL DDLLD D K
Sbjct: 171 FGSCCYVGTALGGGSDKQKKSAYNYGLSIGIAFQLIDDLLDYIADEKK 218
>gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
98-5491]
Length = 288
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 12/240 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L S E + L+ + + + H + L GGK+ R L+
Sbjct: 1 MTEKLHSLFSEF--------ESYLISQSPKVPSFHPYYEKALWEMVLSGGKRFRPKLLLS 52
Query: 61 CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A+E +H YSLIHDDLP+MDN +RRG PT+H +YDE AI+
Sbjct: 53 VVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRGVPTLHHKYDECGAILV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GL T++F I+ K + K + +LS I + + + + ++
Sbjct: 113 GDGLNTHSFYCIAKSKLKPKIKNKLIEILSYNGGIHGMVLGQALDCYFEKQTLPLEKLRT 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
I KT L+ A + G I+A + ++L G +LG+ FQ+ DD++D ++ K
Sbjct: 173 IHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQIRDDIIDATQSSQEAGK 232
>gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061]
gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus nematophila ATCC 19061]
Length = 315
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
L + ++ L + + L +A+++ A+LGGK++R FLV
Sbjct: 19 FEEMLCTCQQHVNDKLMTVFSSL-----PFLDSPLGTAMQHGAVLGGKRLRPFLVYSVGE 73
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F ++ + A+ECIH YSLIHDDLP+MDN +RRG+PT HI++ E AI+AG+ L
Sbjct: 74 MFGLSRKSLDAAALALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESQAILAGDAL 133
Query: 124 LTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
+ AFE+++ + + R ++ L G GM GGQ L+ + + ID + I
Sbjct: 134 QSLAFELLAHYDMPDVALSDRLAMVAELASASGFAGMCGGQSLDLEAEGKQIDLASLEQI 193
Query: 181 QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PK 236
+ KTGAL+ A GA A + L + + +G+ FQ+ DD+LD + K
Sbjct: 194 HRHKTGALIRAAARLGAYSAGQRGREVIPLLDQYTQAIGLAFQVHDDILDVIGNTEIIGK 253
Query: 237 K 237
+
Sbjct: 254 R 254
>gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
Length = 269
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
+E K I+ L +L + ND++ A++Y L+ G K++R L +FN
Sbjct: 4 KEIVKLINNSLKEL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + +IE IH YSL+HDDL MD+ RRGK TVH +Y E A++ G+ LL Y+
Sbjct: 55 SISEPMNYALSIELIHNYSLVHDDLECMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++S D + + ++ + G+ L D I E + I KT
Sbjct: 115 FEVLSESIKNEVDAMCANYIVKKSGCFGM----IRGQLLDIDSEISEDNIIEIYDKKTCN 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
L+ + S I++ +L + NLG+ FQ+ DDL+D E D + KK
Sbjct: 171 LLKASTVSAGILSKVDDETLLKLENYAFNLGMAFQIIDDLMDYENDIKIEKK 222
>gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
Length = 323
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+ +D + + + H+ + + Y + GGK++R + CA
Sbjct: 2 DFKAIYAVVDDDFEAVNQFISHHLDSNVP-LIREVGDYIIQSGGKRLRPLIAILCARAAG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ V A IE +H +L+HDD+ +D +RRG+PTV+ + +++ G+ L++
Sbjct: 61 YQGDRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +++ + + +I SQ +++ LQ + ++ ++ + KT
Sbjct: 119 ALQLMVALRHPRLLDIFSQSTNTISEGEVLQLINVRDPNTSEENYMR------VIHHKTA 172
Query: 187 ALMCFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A E+GA++ A + + + +G +LGI FQL DD+LD + D L K
Sbjct: 173 KMFESAAETGAVL-GADEVSDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGK 226
>gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
Length = 264
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 43 IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ Y ALLGGK++R FLV + + AAIECIH YSLIHDDLP+MDN +R
Sbjct: 1 MEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGML 160
RG+PT HI++ E +AI+AG+ L T AF I++ R ++ L G+ GM
Sbjct: 61 RGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMC 120
Query: 161 GGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
GGQ L + + + ++ I + KTGAL+ A GA+ A S + L F +
Sbjct: 121 GGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAI 180
Query: 218 GIIFQLADDLLDCEEDLP 235
G+ FQ+ DD+LD D
Sbjct: 181 GLAFQVQDDILDVTGDTE 198
>gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase (opp synthetase) [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase (opp synthetase) [Photorhabdus asymbiotica]
Length = 323
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 1 MNGGLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSF 56
MN L S ++ ++ ++ + L + + Y + GG K+IR
Sbjct: 1 MN--LESIIKLTADDMAAVNEAILSQLNSDVALINQLGY--------YIISGGGKRIRPI 50
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A + V A IE IH +L+HDD+ +D +RRGK T + + +
Sbjct: 51 IAILAARALGYQSDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANATFGNAAS 108
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ + T +F+++++ + + S+ + LQ M +
Sbjct: 109 VLVGDFIYTRSFQMMTTLNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISE------DD 162
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ KT L A S AI+++A+ ++ L+ +G LG FQL DDLLD + D
Sbjct: 163 YMRVIYSKTARLFEVAAHSSAIISNATPEQETALQDYGRYLGTAFQLIDDLLDYDADSNT 222
Query: 234 LPK 236
L K
Sbjct: 223 LGK 225
>gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
Length = 323
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 9/224 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLT 71
++ L LL T + + L +A + GGK++R +V + +T
Sbjct: 9 APVEADL-QLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQEIT 67
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A ++ +D +RRG PTVH + A++AG+ L A +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASWHL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + SQ+++ L LQG+ + + KT +L+
Sbjct: 128 AHLDSLTVVKLLSQVIMDLAEGEILQGLNRFDSSLSIEVY------LDKSYYKTASLLAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + +++ +S+ + L +G +LG+ FQ+ DD+LD
Sbjct: 182 SARAAGVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTGSEE 225
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 14/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L +A+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTALAAFS------LPEPLKAAVHHAVMLGGKRVRPALCYAAASLQAN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 QNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEIISSPKTQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
AFEI+ S + I + M L L + + + + ++ I
Sbjct: 126 AFEILGSRLFDDQAQGTDAAIVLKQMQILATASSKMVCGQVLDLQAEGKHVAQDELENIH 185
Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA+ + + +LR FG+++G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIYSGTDQAIPKLRQFGQSIGLAFQVQDDILDITASTE 240
>gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
Length = 323
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 18/238 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + + +++ ++ L L + + Y GGK++R +
Sbjct: 1 MNISDITALVKDKLALLEEELKKNLDSDV--------EMVNEVAYYVFESGGKRLRPIFM 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ L + + +E IH +L+HDD+ +D RRG+P+ + + ++
Sbjct: 53 FLSSGLGGYTGNRDVILSGVVEYIHTATLLHDDV--IDGAKFRRGRPSANQAFGNDITVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AF + I + +++ Q + +
Sbjct: 111 CGDFLYSRAFVNLVKDGDPKVQMILANAAKTMSEGEVFQLVKTANFNLSF------EEYN 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT L CE GA++A + + FG+ +G+ FQ++DD+LD D K
Sbjct: 165 KIIFSKTAVLFSACCEIGAMLAGFDGERVKMMAEFGKIVGLSFQMSDDILDYLGDPAK 222
>gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 337
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + + ++ ++ D + + A GGK++R L+ C+ L
Sbjct: 23 VASDMQAVNQVILDRMQSEVPLIPEL-------AGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + + Q++ DE + I KT L
Sbjct: 134 EMMVESGSLRALE------ILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVL 187
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+C A+MA S+++++ L +G+ LGI FQL DD +D D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDS 233
>gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
oeni ATCC BAA-1163]
gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
oeni ATCC BAA-1163]
Length = 278
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALR 74
+ L ++ +++ + +D + I YAL GK++R L A+ NV + + +
Sbjct: 11 NRYLPEINNDLSNYFADRDDD-IFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIE 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E +H YSL+HDDLP MD+ RR + + ++ A++ G+GLLT AF+ IS+
Sbjct: 70 AATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+R L+L L QD+ + I MKTGALM +A
Sbjct: 130 SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAAT 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
+G I+A S ++ L +G NLGI FQ+ DDL D ++D KK
Sbjct: 190 AGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 234
>gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase ) [Natronomonas pharaonis DSM
2160]
gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Natronomonas pharaonis DSM
2160]
Length = 341
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 28/257 (10%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
M + S + E + ++ + + L Q +RL SA RY L GGK++R +
Sbjct: 1 MTSADHVESAIAERREIVNEAVSEQL-------PVQKPERLYSASRYLLDAGGKRLRPTI 53
Query: 58 VTECASLFNVNHLTALRVGAAIECI--------------HCYSLIHDDLPSMDNGYIRRG 103
+ A + S MD+ +RRG
Sbjct: 54 LLLAAESLADVEPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRG 113
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
P VH +YD TAI+AG+ L + AFE + + ++ + L+ T +G
Sbjct: 114 VPAVHREYDLETAILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDV 173
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ + + + KT L A AI+ + E L +G ++G FQ+
Sbjct: 174 DF-ENRSDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQI 232
Query: 224 ADDLLDCEE---DLPKK 237
DDLLD +L K+
Sbjct: 233 QDDLLDLTAPSDELGKQ 249
>gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617]
Length = 324
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 18/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIING-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N ++ + A ++ +D +RRGK T + + +++
Sbjct: 54 LAARAIN-DYAGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 113 GDFIYTRAFQMMTSLGSLKVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYMR 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI+A AS+ E++ L+ +G +G FQL DDLLD D L K
Sbjct: 167 VIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGK 226
>gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163]
Length = 324
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 18/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIING-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N ++ + A ++ +D +RRGK T + + +++
Sbjct: 54 LAARAIN-DYAGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 113 GDFIYTRAFQMMTSLGSLKVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYMR 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI+A AS+ E++ L+ +G +G FQL DDLLD D L K
Sbjct: 167 VIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGK 226
>gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP]
gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP]
Length = 342
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61
L ++E +K +D ++ + + + L A Y L GGK++R F+V
Sbjct: 5 DALFRSIKEKAKVVDDVI-------FELLPEKEPEELYEATRHYPLAGGKRVRPFVVLTA 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AL AAIE +H Y+LIHDD+ MD RRG+ TVH + AI+AG+
Sbjct: 58 AEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDET--RRGRATVHKVWGINMAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + F+ + + + ++ +G + +D + +
Sbjct: 116 LMYSVVFDAATKAPVSAEKIVEIVRAIARAGIEICEGQALDLEFETRDTVTI-EEYLKMI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT AL + + G I+ +Q + L +G N+G+ FQ+ DD+LD D K
Sbjct: 175 DGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGMAFQIWDDVLDLIADEKK 229
>gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143]
gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143]
Length = 291
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L++ + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALENF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLKELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon
RC-I]
gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon
RC-I]
Length = 314
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 16/229 (6%)
Query: 16 IDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
I+ +L+ M L +RYAL GKKIR+ L+T N
Sbjct: 8 IEKVLESRATLIDKEMGLLSFVIEPPELAEVVRYALCQKGKKIRASLLTIACEAVGGNIA 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ A +E IH SL+ DD+ +DN RRG+ T++ ++ A+IA + LL
Sbjct: 68 QAMVPAAVVEMIHNTSLVLDDV--IDNAETRRGRSTINHRWGNNMALIACDALLALTIRQ 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
S + + + + + G+ L++ + + I + KT +L
Sbjct: 126 ASKSSVNMTNA------IIECAANSMLSLAEGEALELVGKDYTLKDYYKIAERKTASLFS 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ E GA++ + E + LR +G ++GI FQ+ DD+LD L K
Sbjct: 180 ASAEIGALVGGGTSKEVKSLREYGTSIGIAFQIRDDILDVTSSNDSLGK 228
>gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
Length = 267
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
+RI+ L +L Q RL A+ YA+ GGK+IR F V+
Sbjct: 7 YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPA 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AIE +HCYSL+HDDLP+MD+ RRGKP+ H +DE TAI+ G+ L AFE+
Sbjct: 62 QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ N+ + SL G Q L+ +++ Q+ ++ ++KTGAL
Sbjct: 122 LARDNNTRLINVLANACGSLGMAGGQQ-----LDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA+ A + ++LR G +G+IFQ DDL D + K
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEK 223
>gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 337
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + + ++ ++ D + + A GGK++R L+ C+ L
Sbjct: 23 VASDMQAVNQVILDRMQSEVPLIPEL-------AGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + + Q++ DE + I KT L
Sbjct: 134 EMMVESGSLRALE------ILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVL 187
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+C A+MA S+++++ L +G+ LGI FQL DD +D D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDS 233
>gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307]
gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307]
Length = 323
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 96/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S + + + +++ L+ LL + + H +A GGK++R +V + +
Sbjct: 2 STVAQLLQPVESDLEQLLSDLRALIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALD 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+LR + ++ +D RRG PTVH +++ A++AG+ L
Sbjct: 62 PAGELSLRHRRLAQITEMIHTASLVHDDVVDEANTRRGVPTVHSRFNSRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ +++ + S++++ L QG+ KT
Sbjct: 122 QSSWHLANLDDLEVVKLLSRVIMDLAEGEIRQGLFRYDTGQSL------ETYLEKSYWKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ +++ +++ +L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSAKAAGVLSELERDQLNQLHSFGRQLGLAFQIVDDILDFTGSDDQLGK 229
>gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17]
gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17]
Length = 323
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
K D +L + S + L + I+Y L +GGK+IR L+ +LF +
Sbjct: 1 MKTTDELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEK 60
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A++ +
Sbjct: 61 ILSSACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRM 118
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + L + +R +L G Q + + + E + + ++KT L+
Sbjct: 119 TECDSHLAEVLRLFTETALEIGEGQQMDMEFETRNDVRE----EEYIEMIRLKTSVLLAC 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + GA++A A ++ + L FGE +G+ FQL DD LD D
Sbjct: 175 AMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGDPA 218
>gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 253
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S+ +++ I+ L+ + ++ +++ Y GGK+IR V
Sbjct: 5 DIYSRKKKDIAFIEKSLERSIDVDLPTLRD-------ASLLYLKAGGKRIRPVFVLLAGE 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + +E IH SL+HDD+ +D+ RRGK TV ++D A+ G+ +
Sbjct: 58 FGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAETRRGKATVRSKWDNRIAMYTGDYV 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +++ K I S+ M+ ++ Q + K
Sbjct: 116 YAKALTLVTELKNPAIHQIMSKAMIEMSIGEMEQI------RLFFEHGQTLRDYLRRIKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KT L+ +C+ GA+ A AS+N +RL FG +G+ FQ+ DD+LD K+
Sbjct: 170 KTALLIAVSCQLGAMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVG-TEKQ 222
>gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO2]
gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO2]
Length = 322
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 9 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 62 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 120 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 174 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYSGSAADLGK 223
>gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
Length = 286
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
MN ++ N +++ D + + + D L +I Y+L+ GKKIR
Sbjct: 1 MN-NFKLFIETNKDKLNAFAKDYVEKL------EMPDILKESITYSLVNDGKKIRPLSFL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + AIE +H YSL+HDDLP MDN R GK T H Y + A++
Sbjct: 54 YLLKFYGIEYSKYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKYTNHKVYGQDVAVLT 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +LT AFE++S + +R + + ++ +D +
Sbjct: 114 GDAMLTLAFEVLSDADVKPDLKVRLIKQFANYSGAMGMIAGQIYDVKQKNYDVDADYLRK 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KTG L+ + ++A+ + + ++ FG+ LGI +Q+ DD+LD D K
Sbjct: 174 MHSLKTGRLIELPLDFACLVANK-LEDYDDVKEFGQQLGIAYQIKDDILDYYGDFEK 229
>gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 337
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + + ++ ++ D + + A GGK++R L+ C+ L
Sbjct: 23 VASDMQAVNQVILDRMQSEVPLIPEL-------AGHLISSGGKRMRPMLMLACSRLIGEP 75
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ AAIE IH +L+HDD+ +D+ +RRGK T + + ++ G+ LL+ AF
Sbjct: 76 RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + + Q++ DE + I KT L
Sbjct: 134 EMMVESGSLRALE------ILSNAAAIITQGEVDQLVSQYQVETDEARYLSIIGAKTAVL 187
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+C A+MA S+++++ L +G+ LGI FQL DD +D D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSDS 233
>gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
Length = 291
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E ++
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHIA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YVLIAQADLPSQIKVDLISNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEMQVKLKIVGELIGLAFQVRDDVLDVTASFE 225
>gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
44963]
gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
44963]
Length = 329
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L +DT+ D + A+ T N +++ GK++R+ L
Sbjct: 4 TATLSRLFAGIQADLDTV-DKTFQERATSGLTILNS---ASMHALGAPGKRLRTALTLLA 59
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L L + A E H +LIHDD+ +D RRG PTV+ + + AI+ G+
Sbjct: 60 GKLNTYRFEKLLLLSVAFEMTHLATLIHDDI--VDESSTRRGNPTVNALFGDKIAILLGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+I+ + D++ S + ++ L+ M G + ++ + ++T
Sbjct: 118 YYFAKTAGLIADIEDPRIDHLFSDTVATVCEGTILEMMTAGNIDLSKETYYEKT------ 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT LM + GAI++ A+ E E L +G +LG FQ+ DD+LD +D
Sbjct: 172 RSKTACLMAACSKGGAIISGATPEEIELLYAYGMHLGTAFQIIDDILDYTQDQS 225
>gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2]
gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
Length = 321
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 92/241 (38%), Gaps = 22/241 (9%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + +Q++ + D ++ L + Y + GGK++R LV
Sbjct: 1 MTLSQIRKLIQDDIEATDQLILSKLSSDVVLINQIG--------HYIINSGGKRLRPLLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + L + A IE IH +L+HDD+ +D RRG T + + +++
Sbjct: 53 LLSAHACDYKGKDHLTLAAVIEFIHTSTLLHDDV--VDESETRRGNQTANEVWGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + +FE++ P + S+ + LQ + D +
Sbjct: 111 VGDFLYSRSFEMMVEPGIMRVMEVMSETTNVIAEGEVLQLLNC------HDADTTSQRYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A G I+ + +G +LG FQL DD LD D L
Sbjct: 165 EVIHRKTAKLFEAATLLGPIL-GKKPELESAFSSYGRHLGAAFQLIDDALDYTADADELG 223
Query: 236 K 236
K
Sbjct: 224 K 224
>gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
DSM 44702]
Length = 338
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 15/235 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + E R+++ L D L S + + AL GGK+ R
Sbjct: 16 DAALNDFIAEGMTRVESTLQDSLSTGESFLTDKVQ-------HLALAGGKRFRPMFALLA 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A V A + L MD RRG + + ++D AI+AG
Sbjct: 69 SRYGSTPETAAQTVVNAAVVVELTHLATLYHDDVMDEADRRRGSESANARWDNSVAILAG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + A I++ + ++ L + + + D D ++ +
Sbjct: 129 DFIFAVASSIMADLGPETV-RHFAETFGELVTGQMRETVGCPEGEDPVDHYMT------V 181
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A G++ A +++ L FG +LG +FQ+ DD++D D
Sbjct: 182 IQEKTGVLIASAGFLGSMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSDPE 236
>gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
Length = 280
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M + ++++ S + L L+ + L+ AI Y L GK +R+FL +
Sbjct: 2 MRCHIKERVKDFSNLVGKELTKLIETQVTGGPAAG---LVDAIGYCILPPGKCLRAFLAS 58
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A F V+ L + AIE +H YSL+HDDLPSMDN RRGK + HI++ E A++
Sbjct: 59 SVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLT 118
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LLT FE++SS + ++ G +GM+ GQ LD+ + V
Sbjct: 119 GDALLTLTFELLSSMDESCTVKCAI--IRVISDACGHRGMVAGQALDMGNLEPSLEAVKQ 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I K+KT L ACESGAI+A S ++ L +GE LG FQ DDL D ED
Sbjct: 177 IHKLKTARLFSAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINED 230
>gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 338
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 8/234 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + ++ + D + H+ + D L A + GK +R L
Sbjct: 9 AIEAAMRAAFPQADERVARFYAMQEYHLGWRDED-LQPA---SFAPGKLLRPRLCLLSCR 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + AL + AAI+ +H +SLIHDD+ D RRG+PTV + I G+G+
Sbjct: 65 VVGGDPRDALPLAAAIQLLHDFSLIHDDIQ--DQSDTRRGRPTVWKLWGLAQGINTGDGM 122
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQ 181
T A + +L L G + + + + +
Sbjct: 123 FTIAHLALHRLSLTGVPPATVLDVLRRFDETILTICEGQFLDLSYEGNLQIDESAYLAMI 182
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT AL+ + E GA++ A + + L FG LG+ FQ+ DD+L D
Sbjct: 183 ERKTAALIAASAELGALVGGADEETIQALFDFGRALGLAFQIEDDVLGIWGDPA 236
>gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 324
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
++ Q + N + RY L GK+IR +V A L + ++ R +E
Sbjct: 15 EIFQQRYKVVLQGQNTLVDKVTRYVLKQQGKQIRPAMVLLAAQLCGGVNESSYRAAIMVE 74
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H +LIHDD+ +D +RRG +++ + +++ G+ LL+ K
Sbjct: 75 LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLEYKDYGFL 132
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
++ S+ + ++ Q + I E + KT +L+ AC GA+ A
Sbjct: 133 HMVSEAVRRMSEGEIFQI------QKTRSLDISEADYLSVIADKTASLISSACAMGAMSA 186
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ L+ +GE LG+ FQ+ DDLLD D K
Sbjct: 187 TTDEVRIAALKSYGEYLGLAFQIRDDLLDYTGDSKK 222
>gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
Length = 267
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
+RI+ L +L Q RL A+ YA++ GGK+IR F V+
Sbjct: 7 YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AIE +HCYSL+HDDLP+MD+ RRGKP+ H +DE TAI+ G+ L AFE+
Sbjct: 62 QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ N+ + SL G Q L+ +++ Q+ ++ ++KTGAL
Sbjct: 122 LARDNNTRLINVLANACGSLGMAGGQQ-----LDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA+ A + ++LR G +G+IFQ DDL D + K
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEK 223
>gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
Length = 331
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 14/234 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S ++++ +R + ++ + L + + L S GGK++R L A
Sbjct: 10 ARLRSLVEQDLQRTNEVILEQLNSPVELITQVGDHLLNS-------GGKRLRPILTLVTA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
LF + AA+ + + +D RRG+ T + + I+ G+
Sbjct: 63 KLFGYQKADVHALLAAVVEFIHTATLL-HDDVVDKSNTRRGQATANSVWGNKAPILVGDF 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+I+ I S ++ +Q + D DE + + +
Sbjct: 122 LFSRSFQIMVEHGDLRVLRIVSDCCAIISEGEVMQLV------ASNDLATDEERYLDVIR 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT +L A + GA++A S +R+ +G LG +Q+ DDLLD + K
Sbjct: 176 HKTASLFASASQLGAVVADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEK 229
>gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1]
gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1]
Length = 338
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ R++ ++ + A GGK++R + A +F +
Sbjct: 25 KDDMARVNDLILSKAGSDVELIPQL-------ARHLISSGGKRLRPMITLAAAQMFGYSG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF
Sbjct: 78 EGHVKLATSVEFMHTATLLHDDV--VDESDMRRGKKTARTIWGNQASVLVGDYLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + +Q ++ E + + K KT AL
Sbjct: 136 MMVDVGSLEALDVLSSAASIIAEGEVMQL------GVSKNLETTEDEYLSVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A AS+N++ LR FG NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPIIAEASRNDRAALRSFGINLGLAFQLVDDALDYGGSSRDLGK 239
>gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 18/236 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + + ++ + ++ + + L + Y + GG KKIR +
Sbjct: 1 MNLESIINLTAKDMEAVNKAILNQLNSDVHLINQLG--------HYIISGGGKKIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILVGRALGYEGKKHINVAALIEFIHTATLLHDDV--VDESTLRRGKKTANAVFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + Q + + I E+
Sbjct: 111 VGDFIYTRSFQMMTELDSMPILKLMSDATNVIAEGEVSQLINC------NNPDITESTYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
I KT L A + AI++ A++ +++ LR +G LG FQL DDLLD + D
Sbjct: 165 QIIYSKTARLFEAATHASAIVSGANETQQQALRDYGRYLGTAFQLIDDLLDYDADS 220
>gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 296
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E K+ID+I++ + AI+ GGK++R ++ E
Sbjct: 3 KEKIKKIDSIIESFFYAEDGLNKKVITAS-NEAIK---NGGKRLRPLIMFEIYRAVAGEE 58
Query: 70 LTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ IE IH +SLIHDDLP+MDN +RRGKPT + Y E AI+AG+ L
Sbjct: 59 YREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCVQ 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN----IGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFEIIS + D + M + G GM+GGQ +D++ ++
Sbjct: 119 AFEIISKKMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLRYT 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++KTGAL+ + G I+A A+ E L+ G +G FQ+ DD LD D
Sbjct: 179 YELKTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVADEK 233
>gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
Length = 282
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ LQ K ID + +L + S + + Y LLGGK+IR ++ A+
Sbjct: 1 MEIYLQNIRKDIDKSIRKVLKKHKSI------KEIDDMLEYGVLLGGKRIRPSIMYILAN 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ + +IE IH YSLIHDDLP MDN RRG TVH +Y E A++ G+ L
Sbjct: 55 VYKKDKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNLTVHKKYGEANAVLVGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
LT AF +++ +++ + + + + G+ +L+ I+ ++ I
Sbjct: 115 LTLAFSVLA--ESEYSNKYSIVALSYYSGHKGMILGQYLDLLNENKADINFDELMEIHLN 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L+ + E AI + + LR + LG+ +Q+ DD+L+ E K
Sbjct: 173 KTAMLLMASVEIAAISLSINTEARNALRKYILYLGLAYQIQDDILEMESSFEK 225
>gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36]
gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36]
Length = 296
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + + RI+ L + + H+ +L +A+ Y LL GGK+IR +V
Sbjct: 3 LSNSITRYQGRINDYLQQQIN-----LLPTHDTQLAAAMEYGLLQGGKRIRPVIVYAVGE 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ VN AAIE IH YSLIHDDLP+MD+ +RRG+PT HI++D TAI+AG+ L
Sbjct: 58 MLGVNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDAL 117
Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
+AFE++ + R ++ SLT G GM GGQ +D D+ I TQ+ I
Sbjct: 118 QPFAFEMLLDCALAPEAEKNRFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAI 177
Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A + G + + H S L + +G+ FQ+ DD+LD D
Sbjct: 178 HNNKTGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISDTE 233
>gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
Length = 327
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 9/219 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GGK+IR +V + ++ R
Sbjct: 15 VEDDL-RLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDSDITPR 73
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RR PTV+ +D A++AG+ L + +++
Sbjct: 74 HRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 133
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ QG+ KT +L+ +
Sbjct: 134 LDNLEVVKLLSEVIRDFAEGEIFQGINRFDTSLTL------DAYLDKSYYKTASLIANSA 187
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+S AI++ +S + L +G LG+ FQ+ DD+LD
Sbjct: 188 KSAAILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTS 226
>gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
Length = 324
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+++ + + + L + + N + RY L GK+IR +V A+L
Sbjct: 3 IKDVTASVADEI-ALFQEKYRVVLHSRNTLVDKVSRYVLKQQGKQIRPAIVLLSANLCGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ R +E +H +LIHDD+ +D +RRG P+++ + +++ G+ +L
Sbjct: 62 VNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLPSINALWKNKISVLMGDYMLARG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S+ + ++ LQ + I E + KT +
Sbjct: 120 LLYSLDHNDYGFLHMVSEAVRRMSEGEILQI------QKTRSLDITEKDYLSVISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ +C GA+ A ++ L+ +GE LG+ FQ+ DDLLD D
Sbjct: 174 LISSSCAMGAMSATTDESNIAALKNYGEYLGLAFQIRDDLLDYTGDSK 221
>gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus LMD-9]
gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9]
gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase
[Streptococcus thermophilus ND03]
Length = 290
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
K+ID + D + + + L+SAI Y++ GGK+IR + + F +
Sbjct: 3 KLKKIDAAIRDFYQKKTPPVSSD----LISAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + A++E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 59 PSHFDIAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + ++ LS + + +D +Q+ I + KTG L+
Sbjct: 119 LVAQTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
F + I+A E L+ G +G+ FQ+ DD+LD D
Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224
>gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
Length = 336
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQVGLTAVEEGLLEATKSEVAF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 AAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A +++ + +T I + +D +
Sbjct: 123 DFLFSRASHMLADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ AC GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LAGKTGSLVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus
selenitireducens MLS10]
gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus
selenitireducens MLS10]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+++ +I+ L+ ++ +H + ++ GGK+IR V A +
Sbjct: 9 YLKQDISKIEKELE-------MSIEARHPVLVKASSHLLKAGGKRIRPVFVLLSAQFGDY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
V +E IH SL+HDD+ +D+ +RRGK T+ ++D A+ G+ + A
Sbjct: 62 KLDKVKHVAVPLEMIHMGSLVHDDV--IDDAELRRGKKTIKAEWDNRVAMYTGDYMFAKA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
EI S I S M+ ++ Q ++ K KT
Sbjct: 120 IEIASKSGNMKLHEILSDAMVEMSIGEVEQIKEQFNPDQHLRIYLRR------IKRKTAL 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ +CE GA++A A + + +L+ +G G+ FQ+ DD+LD +L K
Sbjct: 174 LISVSCELGALIAGADETTQMKLKRYGYFTGMAFQITDDILDFVGTEKELGK 225
>gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413]
gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + L +A + GGK+IR +V + + R
Sbjct: 11 VEADL-RILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH + AI+AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ + +I+++ KT +L+ +
Sbjct: 130 LDNLQVVKLLSEVIMDLATGEIQQGLNRFDASISIENYIEKS------YYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
++ +++ S E L +G +LGI FQ+ DD+LD D L K
Sbjct: 184 KAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTSTTDTLGK 229
>gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 324
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D + + +D L + L GGK++R V N + + +E
Sbjct: 15 DFIERQLYRSIDGDDDLLSETSLHLLKAGGKRLRPVFVLLGGKFGNYDLQKLQYIAVPLE 74
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH SL+HDD+ +D+ RRGK TV ++D A+ G+ + A +S
Sbjct: 75 LIHSASLVHDDV--IDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQVSELANPYIH 132
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I ++ M+ ++ Q ++ + KT L+ +C+ GA+ A
Sbjct: 133 RILAKAMVQMSIGEMEQIRDFFNTEQSVRNYLLR------IRRKTALLIAISCQLGAMAA 186
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A L +G N+G+ FQ+ DDLLD
Sbjct: 187 DAPAKVSALLYRYGYNVGMAFQIRDDLLDLFG 218
>gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
Length = 319
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E +ID L+ + + ++ L +A ++ L GGK+IR +L T L N
Sbjct: 6 KELLSKIDNELNKYVEK---------DNTLYNASKHLLFAGGKRIRPYLATLTYMLKKDN 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L A+E IH Y+LIHDD+ MDN RRG+ TVH++Y E AI+AG+ L AF
Sbjct: 57 LDEILPPAVAVELIHNYTLIHDDI--MDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAF 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E IS+ K K + + + + + + + I F + KTGAL
Sbjct: 115 EAISNIKDPKKAHEVLKALSKACVEVCEGQAMDMEF--EDRDKISLDDYFEMISKKTGAL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ E GAIMA + E+ L + + +G+ FQ+ DD+LD D K
Sbjct: 173 IIAPIEIGAIMAECTDEERNALYEYAKRIGMTFQIQDDVLDLIGDNKK 220
>gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
Length = 325
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 9/226 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
I+ + + + + + L I+Y + GGK++R L +L+ + AL+
Sbjct: 5 IEQLREVIKAELDKQEYVEEPYSLFEPIKYIMEDGGKRLRPVLTLMAYNLYRDDIGKALK 64
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
IE H Y+L+HDD+ MD+ +RRG+ TVH +++ AI++G+ A++ I +
Sbjct: 65 SAIGIEIFHNYTLLHDDV--MDDAELRRGRQTVHKKWNSNVAILSGDAAAITAYKYIETC 122
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + Q M + + E + + +KT L+ +
Sbjct: 123 EDPYLRRVIDGFNQVAMDVCKGQ---QYDMEFETRDDVTEEEYIQMIYLKTSVLIAGSMR 179
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GA++A A ++E + L FG LG++FQL DD LD D KK
Sbjct: 180 HGALIAGAPEHEYKELYDFGGYLGLVFQLQDDYLDVYGDVEEFGKK 225
>gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8]
gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8]
Length = 297
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 15/245 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M ++ + ++D L + + + +L A+ Y+L GGK++R L+
Sbjct: 1 MTENNKLLMKAYADKVDEQLLKF-----TENKPELQGVVLEAMEYSLTAGGKRLRPMLML 55
Query: 60 ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E + + L++ ++E IH YSLIHDDLP MD+ RRGKP+ H + E A++
Sbjct: 56 EFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMDDDDYRRGKPSCHKAFPENIALL 115
Query: 119 AGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQML--DIQDEFIDE 174
AG+ L T AFE+IS + + L+ L+ IG GM+GGQ++ ++E I
Sbjct: 116 AGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAIGTDGMIGGQVIDLQTENEEISI 175
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
+ +Q KTGAL+ AC G I A + + + +G FQ+ DD+LD
Sbjct: 176 ETLNTLQSCKTGALIEAACVMGVIAAGR-LDLIPAAADYAQAMGRAFQIVDDILDVTGTF 234
Query: 233 -DLPK 236
+L K
Sbjct: 235 EELGK 239
>gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 322
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++++ L + + + + + + L GGK++R LV S+ + +
Sbjct: 10 ISSELRQVEQKLLESVPEEIPELASVVRSLI-------LAGGKRLRPALVFLSGSINSPD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
H L A+E +H +LI ++D +RRG T + + I+ G+ L A
Sbjct: 63 HEKLLNAAVAVELLHTATLI--HDDTIDQADVRRGIATANSIFGPGVVILLGDFLFAKAA 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ +++++ + Q + + E + + KT AL
Sbjct: 121 HYAAMTSDPEAIDLFAKVLMVIVDGELRQSL------GKHNGVPSEEEYYRRIYAKTAAL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E+GAI++ A + + L +G+ LG+ FQ+ DDLLD
Sbjct: 175 FECCTETGAILSKAPEPHRRALTTYGKKLGLAFQIIDDLLDFTS 218
>gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 336
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQSLETDVQLGLAAVEAGLLEATKSDVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + + + +E H +L HDD+ MD +RRG P+ + ++ A++ G
Sbjct: 65 ASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSANTRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +D +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A + + L +GE LGI FQLADD+LD D
Sbjct: 176 LSGKTGSLVAVSGRFGAMMSGADERTVDVLTQYGERLGIAFQLADDVLDIASDS 229
>gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103]
gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103]
gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARAMGYQGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 112 GDFIYTRAFQMMTSMGSLRILALMSEAVNVIAEGEVLQLM------NVNDPDITEESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGK 225
>gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 9/219 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GGK+IR +V + ++ R
Sbjct: 11 VEDDL-RLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDRELTPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RR PTV+ +D A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIRDFAEGEIFQGINRFDTTLTL------DAYLDKSYYKTASLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+S AI++ +S + L +G LG+ FQ+ DD+LD
Sbjct: 184 KSAAILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTS 222
>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
Length = 342
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ D+ + + M + +R+ SA+RYA+L G K+ L L
Sbjct: 48 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A++ + L+++DLP + G RRG P+ Y A++AG+ L A+
Sbjct: 108 APVPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTH 167
Query: 131 ISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTG 186
+ + + + +++ L +G GM GQ + E +V + K G
Sbjct: 168 VIAQNPSPEPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA++ A +E+ LR +G +G+++QL DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268
>gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
Length = 291
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVV 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ + ++ AI+ + + +L+ GE +G+ FQ+ DD+LD E++ K
Sbjct: 178 LLAYPFQAAAIITELAPEIQAKLKTVGELIGLAFQVRDDVLDVSASFEEIGK 229
>gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218]
Length = 396
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +++ + L S + Y + GG K++R L
Sbjct: 74 MDFKAIQTLTANDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 125
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE H +L+HDD+ +D +RRGK T + + +++
Sbjct: 126 VLSAKALGYQGQGHTLAAAFIEFTHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 183
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++ + + S+ + + Q M +
Sbjct: 184 VGDYIYTRSFQMMVELGSMKILQLMSEAVNVIAEGEVQQLMNCNDPDTTE------ASYM 237
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GAI+A AS + L+ +G+ LG FQL DD++D D K+
Sbjct: 238 QVIYSKTARLFEAATQIGAILADASPEIETALQNYGKYLGTAFQLIDDVMDYTAD-GKE 295
>gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
Length = 325
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ + +D ++ L + Q + ++SA GGK++R ++ A+
Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLIN-QIGEYIISA------GGKRLRPVILLLVANALGYK 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 66 GEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLYSRAF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 124 QMMVQANSMRIMQILADATNIISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A +E +G +G FQ+ DDLLD
Sbjct: 178 FEAAAQIGAVLSGADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221
>gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2]
gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2]
Length = 309
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 111/242 (45%), Gaps = 18/242 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
S + D L L +M + RL AI +A++ GGK++R LV
Sbjct: 9 TVTFQSWQSDFQTAFDIRLKQRL----GNMLGESPQRLKDAIGHAVIDGGKRLRPILVVL 64
Query: 61 CASL----------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
ASL + AIE IH YSLIHDDLPSMDN +RRGKPTVH
Sbjct: 65 GASLDSTPGSLPDPNDPRLEQLWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRV 124
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+DE TAI+AG+ L + AF +++ Q R + L+ L+ +
Sbjct: 125 FDEATAILAGDALQSLAFSLLA-DAPQTDVKTRLNWVSLLSTGANRMVFGQQLDLNPPAQ 183
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ + ++KTGAL+ A GA +S ++ L F LG+ FQ+ DD+LD
Sbjct: 184 IPALAELTRMHELKTGALLYAALMMGA--NQSSAEDRAALEAFIRPLGLAFQIQDDILDA 241
Query: 231 EE 232
Sbjct: 242 TG 243
>gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 331
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ + + I +DLL + ++ + Y GG K++R L+ A L
Sbjct: 9 KSVKEVFELISEDLLAIEREFGRDTVSNVAAITEIGEYLRNGGGKRLRPALLLLSAKLMA 68
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L A+R+GA +E IH +L+HDD+ +D+ IRRG+P+ + Q+ ++AG+ L
Sbjct: 69 YRGLGAVRLGAVVEIIHTATLVHDDI--IDDAEIRRGRPSANTQWGNSKCVLAGDWLYMQ 126
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++ + + + +L + LQ G+++ +Q + F + KT
Sbjct: 127 AFKVAVAERNFAVLDTLIELTQKMVEGELLQIEKLGKLISLQ-------EHFDLIDRKTA 179
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L G I+ A+ + E+L +G +G+ FQ+ DD+LD
Sbjct: 180 CLFSVCMRLGGILGGATAEQIEKLGEYGHCVGMAFQIVDDVLDLTASEE 228
>gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4]
Length = 322
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
++ I L ++ LQ +Q+ + Y L GGK+IR L+ A L
Sbjct: 1 MEAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALLLLSAKLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + + IE IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 HGDRHVPLASVIEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + S + LQ + + + + K KT
Sbjct: 118 FSLMVADGDLNVLKVLSGATTIIAEGEVLQLVCTSDLDVTT------ERYIEVVKSKTAI 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ AC+SGAI+ AS + L+ FG LGI FQL DD LD
Sbjct: 172 LLSAACQSGAILGKASSEREVALQNFGMELGIAFQLVDDTLDYVASEE 219
>gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + L + + + GGK+IR +
Sbjct: 1 MNLEQITELTAQDMADVNARILHQLNSDVALINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARALGYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S ++ + S+ + Q M ++ ++
Sbjct: 112 GDFIYTRAFQMMTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A + AI+A A +++ L+ +G LG FQL DDLLD + D L K
Sbjct: 166 VIYSKTARLFEAAAQCSAILAGADTAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGK 225
>gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium
meliloti 1021]
gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti
1021]
gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
Length = 338
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ +R++ ++ + N + S GGK++R L AS+F
Sbjct: 26 SDMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASMFGYEGD 78
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF +
Sbjct: 79 GHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRM 136
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ S + LQ ++ E + + KT AL
Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALFA 190
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E G I+A S+ ++ L+ +G NLG+ FQL DD+LD DL K
Sbjct: 191 AASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGK 239
>gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
Length = 340
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 27 RADMARVNELILSRAASDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 79
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 80 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 137
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 138 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 191
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 192 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 241
>gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146]
gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + L + + + GGK+IR +
Sbjct: 1 MNLEQITELTAQDMADVNAKILHQLNSDVALINQLGYYIISG-------GGKRIRPMIAI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARTLGYQGDHHLTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S ++ + S+ + Q M ++ ++
Sbjct: 112 GDFIYTRAFQMMTSLESLRILALMSEATNVIAEGEVQQLMNVNDPDISEENYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A + AI+A A +++ L+ +G LG FQL DDLLD + D L K
Sbjct: 166 VIYSKTARLFEAAAQCSAILAGADPAQEQALQDYGRYLGTAFQLIDDLLDYDADGKTLGK 225
>gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
Length = 327
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 22/241 (9%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
M L + ++ + + +D + L + Y + GG K+IR
Sbjct: 1 MTTQLSLEQILTLVKADMQAVDQAILAQLNSDVVLINQLG--------HYIISGGGKRIR 52
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ A+ + A +E IH +L+HDD+ +D +RRG+ T + ++
Sbjct: 53 PLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETANARFGNA 110
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+++ G+ + T AF++++S + + S + Q M + ++
Sbjct: 111 ASVLVGDFIYTRAFQMMASLCSLDVLQVMSDATNVIAEGEVQQLMNVNNPETTEANYMQ- 169
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L A + AI++ A Q +R +G LG FQL DD+LD +
Sbjct: 170 -----VIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANA 224
Query: 235 P 235
Sbjct: 225 E 225
>gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
Length = 338
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 18/236 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L L ++ ++ ++ D + + + + Y GGK+IR L +
Sbjct: 16 LSKFLDKDMSEVNNVILDCISSSQEQL-------IYEVGTYFFNAGGKRIRPMLTIIISK 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LFN + L+ + AA+E IH +L+HDD+ +D +RR PTVH+++D T+I+ G+ L
Sbjct: 69 LFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFL 126
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +F+++ ++IR+ SL+ N + G + + I E + F + +
Sbjct: 127 FSQSFKLM-----IKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQA 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L +CE AI+++ S ++ FG LG+IFQ+ DD+LD + L K
Sbjct: 182 KTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGK 237
>gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 317
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
+ K+I+ L+ + +D++L A + L GGK++R V +
Sbjct: 6 INSEIKKIEKRLEQSIKS---------HDKVLEAASHHLFSSGGKRVRPAFVILSSQFGK 56
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ RV +E IH +L+HDD+ +D RRG T+ ++D+ TAI+ GN LL
Sbjct: 57 EMNEDVYRVAVTLELIHMATLVHDDV--IDKSDKRRGSLTISKKWDQNTAILTGNFLLAR 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
E IS+ + + S+ ++ + Q ++ KT
Sbjct: 115 GLEHISNIEANRVHAVISRAIVEVCMGELYQFQDQFNGHQTITNYLRR------INRKTA 168
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ + E GAI + A L+ G +G+ FQ+ DD+LD K
Sbjct: 169 LLIQLSTEVGAITSGADAKTVHNLKMIGHYIGMSFQIVDDILDFTSTEKK 218
>gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
Length = 323
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + L ++ ++ + D L + N + GGK+IR +
Sbjct: 1 MNLEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LTARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + ++ S + + LQ M D I E
Sbjct: 112 GDFIYTRAFQMMTSLASLRVMSVMSDAVNVIAEGEVLQLMNC------NDPDITEDSYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI++ AS ++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAAAQASAILSGASSEQELALQDYGRYLGTAFQLIDDLLDYSADGKTLGK 225
>gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988]
Length = 388
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 13/234 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALR 74
ID L+ L + H L+ +R + GGK+IR L T
Sbjct: 52 IDERLNAFLDAKSGRDTDVHLVSLIEHLRDFLAAGGKRIRPLLCMVGWHAAGGYGETEPI 111
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------QYDEVTAIIAGNG 122
+GAA ++ MD RRG+PT+H ++ +AI+ G+
Sbjct: 112 IGAAASLELFHAFTLIHDDVMDASDTRRGRPTLHRTLETGANGTTAERFGTNSAILLGDL 171
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
++ ++ E++ S + + + +L + G + Q E + +I+
Sbjct: 172 VMVWSDELLYSSGLDQQQLVAVRPLLDAMRTEVMIGQYRDLLSTGQPTADVERSLAVIRY 231
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ GA +A A Q+ + + +G FQL DDLL D K
Sbjct: 232 KTAKYTVERPLHIGAALAGADQSLLDVCTAYALPIGEAFQLRDDLLGVFGDPSK 285
>gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 267
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
+RI+ L +L Q RL A+ YA++ GGK+IR F V+
Sbjct: 7 YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AIE +HCYSL+HDDLP+MD+ RRGKP+ H +DE TAI+ G+ L AFE+
Sbjct: 62 QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ N+ + SL G Q L+ +++ Q+ ++ ++KTGAL
Sbjct: 122 LARDNNTRLINVLANACGSLGMAGGQQ-----LDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA+ A + ++LR G +G+IFQ DDL D + K
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEK 223
>gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330]
gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686]
gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330]
gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
Length = 340
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 27 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 79
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 80 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 137
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 138 MMVDVGSFDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 191
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 192 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 241
>gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces
melanosporofaciens]
Length = 359
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 82/240 (34%), Gaps = 16/240 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--NH 69
K +D +L+D L A H L ++ L GGK+IR L +
Sbjct: 16 VRKSVDVVLEDFLTAKAHTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDT 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQYDEVT 115
RV A +E H ++LIHDD+ + +P ++
Sbjct: 76 EPVFRVAACLEMFHAFALIHDDVMDDSDTRRGRPTIHRTLAALCATDRRPEQIERFGVSG 135
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ G+ LT++ E++ S +LS + G + E
Sbjct: 136 AVLLGDLALTWSDELLHSAGLTPVQFDAVLPLLSEMRTEVMLGQYLDLQATGELTDDVEA 195
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + + GA +A A E + LG FQL DDLL D
Sbjct: 196 TLTVNRYKTAKYTIERPLHVGAAIAGAGPEAMEAFTAYALPLGEAFQLRDDLLGVYGDPE 255
>gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
Length = 370
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 48 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 99
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 100 VLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 157
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 158 VGDFIYTRAFQMMTSLGSLKVLEVMSKAVNVIAEGEVLQLMNVNDPDITEENYMR----- 212
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A S+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 213 -VIYSKTARLFEAAAQCSGILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 271
Query: 236 K 236
K
Sbjct: 272 K 272
>gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
str. F0108]
gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
str. F0108]
Length = 325
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L I T L D + + T + L A+ + GGK++R L+ F
Sbjct: 3 YLSTIRTPIHTELKDFIALFDESL-THKDGLLGQALEHVRAKGGKRMRPILILLMTKSFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+
Sbjct: 62 KVTSVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A I+ ++L +L++ LQ +I + E F + + KT
Sbjct: 120 ALLNIARTNDCDIVCDLAELGRTLSNGEILQL------TNIANTNFSEEVYFEVIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
AL GA A + E R FG N+G+IFQ+ DD+ D DL K
Sbjct: 174 ALFEACAVIGAKAGGADRQAVEAARAFGRNVGVIFQIRDDIFDYYQSADLGK 225
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group]
Length = 349
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ D+ + + M + +R+ SA+RYA+L G K+ L L
Sbjct: 55 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 114
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+
Sbjct: 115 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 174
Query: 131 ISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTG 186
+ + + +++ L +G GM GQ + E +V + K G
Sbjct: 175 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 234
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA++ A +E+ LR +G +G+++QL DD+
Sbjct: 235 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 275
>gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 332
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
++ ++ L +L Y + GG K++R L+ + L
Sbjct: 19 RDQMAAVEEKLHAILTGIVPLAS--------EMTSYVVSGGGKRLRPLLMVISSRLSGAE 70
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A +E IH +L+HDD+ +DN +RRGK H ++ AI+ G+ L +
Sbjct: 71 GPEPILLAAVVEMIHTATLLHDDV--VDNADVRRGKKAAHQRWGNQPAILVGDFLYANSL 128
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + ++ + ++ L+ L G + + Q + + KT L
Sbjct: 129 WLAMGLHSHEVNDSLTLACKKMSEGEILELFLDGNLEATE------DQYYNVAACKTATL 182
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G I+ S EKE L FG +G+ FQ+ADD LD K
Sbjct: 183 TASTCRLGGILGGLSDEEKEALDRFGYYVGMAFQVADDALDYMASEEK 230
>gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334]
gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334]
Length = 291
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE + + L+D + Q L ++ Y++ GGK+IR FL+ E V
Sbjct: 4 QEKLALVQSALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + + + ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + +E+L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEMQEKLKTVGELIGLAFQVRDDVLDVTASFE 225
>gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
Length = 326
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
++ + K I+ L ++ + ++ D GGK++R LV F+
Sbjct: 14 QISKEMKLIENELMRVIEEGDESIRGILKD--------FFAGGKRLRPKLVLLSGLCFSP 65
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A E IH SLIHDD+ +D RR +PT++ Y TA++AG+ + A
Sbjct: 66 VNTKMIYSAVAAELIHTASLIHDDV--IDRSDYRRNRPTINYVYGNHTAVLAGDYIFAKA 123
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + + + +Q + D +DE + F + KT +
Sbjct: 124 FEVLCRQNLNRCMGYLVEAIQEMCTGEIIQA------RESPDLTVDEDRYFRTIEKKTAS 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ C+SGA A + + E++ FG LG FQ+ DD+LD D
Sbjct: 178 LIAACCKSGADCGKADEVQIEKMGLFGLYLGYAFQIVDDILDITGDTS 225
>gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
NBRC 100599]
gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
NBRC 100599]
Length = 321
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 16/230 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
K++++ + I+ L+ + + L GGK+IR V N
Sbjct: 9 KMKKDVQYIEDELEKAIDTPVRELYLSSTHLLK-------AGGKRIRPVFVLLGGKWGNY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ V +E IH SL+HDD+ +D+ RRGK TV +++D A+ AG+ + A
Sbjct: 62 DVKKLKHVAVPLELIHMASLVHDDV--IDDADKRRGKDTVRMKWDNKVAMYAGDYIFARA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I S I S ++ + Q D+ + + K KT
Sbjct: 120 LAIASQLPIPQLHQILSNAIVEVCKGEIQQV------KDLNNWDQNFRTYLRRIKRKTAL 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L+ +C+ GA+ + AS + ++ +G N+G+ FQ+ DD+LD K+
Sbjct: 174 LIAISCQLGAVASGASADMIRKMYWYGYNVGMAFQITDDILDFTG-TEKQ 222
>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
Length = 302
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 13/237 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
L++ +RI L L + + L SA+ +A+ LGGK++R L A+L
Sbjct: 9 AEILKQAQERIQQDLLSALEAFS------LPEPLKSAVYHAVMLGGKRVRPALCYATAAL 62
Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
N N R AIE IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L
Sbjct: 63 QPNSNFAAVRRAAVAIEMIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDIL 122
Query: 124 LTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ AFE++ S + + M L L + + +D++Q+
Sbjct: 123 QSMAFEVLGSRLFDQGVAVDQAVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQLEN 182
Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KTGAL+ A A+ + + + +LR +G+ +G+ FQ+ DD+LD +
Sbjct: 183 IHRNKTGALIQAAIMMAAVTIFNGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETE 239
>gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
Length = 324
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+ E + + L+ + + Q N + RY L GK+IR +V A++
Sbjct: 3 INEVTASVADELEIFRKKYRELLHAQ-NTLVDKVTRYVLRQQGKQIRPAMVLLSAAVSGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
R +E +H +LIHDD+ +D +RRG P+++ + +++ G+ LL+
Sbjct: 62 VTDATYRAAIMVELLHSATLIHDDV--VDGAEMRRGLPSINAIWKNKISVLIGDYLLSRG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ S + ++ LQ + I E + KT +
Sbjct: 120 LLYSLDSGDYGFLHQVSDAVRRMSEGEILQI------QKTRSLDITEEDYLSVISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ +C GA+ A + + ++ +GE+LG+ FQ+ DDLLD D K
Sbjct: 174 LIASSCAMGALSATSDEKSILAMKRYGEHLGLAFQIRDDLLDYTGDSKK 222
>gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 335
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + ++ + +R++ + + + N + S GGK++R L CA
Sbjct: 15 EALVALVKADMERVNATILARTGSDVAMIPEVANHLISS-------GGKRLRPMLTLACA 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
SL +++ A++E +H +L+HDD+ +D +RRGK + +++ G+
Sbjct: 68 SLSGYRGDGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNEASVLVGDF 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF+++ + +I + + +Q + + +
Sbjct: 126 LLGQAFKMMVEVGSMTCLDILATAACVIAEGEVMQLAAAKNTATSE------DDYLAVIR 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE GA++ + E+ R +G NLGI FQL DD LD K
Sbjct: 180 GKTAELFAAACEVGAVLGQRPKAEQAACRSYGMNLGIAFQLVDDALDYGGSQAK 233
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRV 75
T++ ++ + + Q+ + + A+RY++L K+ + LF N L A
Sbjct: 20 TLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPT 79
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S
Sbjct: 80 ACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNT 139
Query: 136 TQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ +++ + +G GM GQ LD++ +Q+ K G + +
Sbjct: 140 PSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGSL---NSAEFVQEKKYGEMGECSA 196
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G ++A A +E +RLR +G +G+++++ DD+L+ +
Sbjct: 197 VCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAKS 235
>gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum
JL354]
Length = 340
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++T++ D + + + A GGK++R L A L N
Sbjct: 30 MNAVNTVILDRMQSEIPLIPSL-------AGHLISGGGKRLRPMLTLAGAELVGYNGTRH 82
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ AA+E IH +L+HDD+ +D +RRGK +I + ++ G+ L + AFE+++
Sbjct: 83 HKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFELMT 140
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + Q + E + I KT AL A
Sbjct: 141 EDGSLKVLKILSSASAIIAEGEVAQL------TSQRKITTSEQRYLDIIGSKTAALFAAA 194
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++A S E++ L +G NLGI FQL DD LD D
Sbjct: 195 SRIAAVVAECSDAEEQALDDYGRNLGIAFQLVDDALDYSSDAA 237
>gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
Length = 323
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + + L +A + GGK+IR +V + + R
Sbjct: 11 VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATMLEKDITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESNVRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLDVVKLLSEVIMDLAAGEIQQGLNRFDTNLST------ETYLKKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ +++ SQ E L +G++LG+ FQ+ DD+LD L K
Sbjct: 184 KAAGLLSEVSQKSAENLYNYGKHLGLAFQIVDDILDFTGSTDTLGK 229
>gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
Length = 366
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + N R++ L + + + + + L+ A GGK+IR L C
Sbjct: 44 DPELGPAITNNLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLTLLC 96
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + ++ +E H +L HDD+ MD+ RRG PT H + A++ G+
Sbjct: 97 AHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGD 154
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
+ A ++S + + GQ+ + + +
Sbjct: 155 LIFARASILVS----------ELGGRALGIQARTFERLCLGQLHETVGPRPDEDPIEHYL 204
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG+L+ + + GAI + A + ++ L +GE +G+ FQLADD++D
Sbjct: 205 SVIADKTGSLVAASGQFGAIFSGADEAYEDVLVEYGEKVGVAFQLADDVIDVTG 258
>gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
Length = 338
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q + +R++ ++ + N + S GGK++R L AS+F
Sbjct: 25 QSDMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASMFGYEG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF
Sbjct: 78 DGHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E G I+A AS+ ++ L+ +G NLG+ FQL DD+LD DL K
Sbjct: 190 AAASEVGPIVASASKADRNALKSYGTNLGLAFQLVDDVLDYGGSSSDLGK 239
>gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
Length = 326
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 12/227 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70
+I ++ + Q ++ +Q + L+ I Y ++ GGK++R LV A
Sbjct: 5 QIHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASAELDK 64
Query: 71 TALRVGAAIECI--HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L + I ++ +D +RRGK T + ++ +++ G+ L + AF
Sbjct: 65 PKLDQAIQMATIIEFIHTSTLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + ++ ++ + Q + G + + + KT L
Sbjct: 125 QIMVDVGSMQCMSVLAKTTNIIAEGEVQQLINCGDPDTTE------ESYLKVIQYKTAKL 178
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA++A AS+ +E LR FG +G FQL DD++D
Sbjct: 179 FEGAALCGAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAE 225
>gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
Length = 323
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + + L +A + GK+IR +V + + R
Sbjct: 11 VEADL-CVLTENLKALIGAQHAVLSAAAEHLFAASGKRIRPAIVFLVSRATLPDQGITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTV+ + AI AG+ L A ++
Sbjct: 70 HCRLAEITEMIHTASLFHDDVVDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASWYLAD 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ SQ++ QG + D I + KT +L+ +
Sbjct: 130 LDNLQVVKLLSQVIKDFAEGEIRQG------FNRFDTSITLDDYLLKTYYKTASLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++ A+++ A E + +G+NLG+ FQ+ DD+LD +L K
Sbjct: 184 KAAAVLSEAPPETIEAMYTYGKNLGLAFQIVDDILDFTRSTAELGK 229
>gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678]
gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059]
Length = 291
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIAGVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 356
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 75/247 (30%), Gaps = 22/247 (8%)
Query: 11 ENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ +K +D+ L L + M+ + + + L GGK++R
Sbjct: 9 DLAKHVDSALAAYLADRRALGERMERSFTEAVDGLTDFVLSGGKRVRPTFAWWGWRAAGG 68
Query: 68 NHLT---------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ + + S P++ + RR + +
Sbjct: 69 DPDQESAGRVLTAVSSLELIQACALIHDDLMDASETRRGRPTIHVQFARRHRENSWLSSP 128
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
E + A + A + LSL ML GQ LD+ +
Sbjct: 129 EQFGLAAAVLIGDVALAWADDMLFAAGLPTDALQRLSLPWRDMRTEMLAGQYLDVLTQAR 188
Query: 173 DETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ ++ + GA + S E LR FG ++G+ FQL DDLL
Sbjct: 189 GDASADAALRIDRLKTAAYTVERPLHMGAAIGGGSAELIEGLRAFGRDIGVAFQLRDDLL 248
Query: 229 DCEEDLP 235
D
Sbjct: 249 GVFGDPA 255
>gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
K84]
gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
K84]
Length = 455
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + + S GGK++R L A+L+N
Sbjct: 142 KADMERVNQLILSKAGSDVQMIPEVAEHLISS-------GGKRLRPMLTIASAALYNYQG 194
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 195 DNHIKLATSVEFLHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 252
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 253 MMVEVGSLEALDVLSSAACVIAEGEVLQL------SVSKNMETTEDDYLSVIRAKTAALF 306
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A+A + E+ L+ +G NLG+ FQL DD LD DL K
Sbjct: 307 SAAAEVGPIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGK 356
>gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 295
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ K++ ++ ++ +L + + ++ N L ++RY+L GGK+IR L+
Sbjct: 2 MNKKMEHLTEEVNQLLSETIP------NSKLNTNLEESMRYSLEAGGKRIRPVLLLLTLE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+E IH YSLIHDDLP MDN RRGK T H + E AI+AG+ L
Sbjct: 56 MLTDQYKKGFSSALALEMIHTYSLIHDDLPPMDNDDYRRGKLTNHKVFGEWKAILAGDAL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
LT AF++I + + + H + G + + ID + I
Sbjct: 116 LTKAFDMIVNDDSLNDVAKVKLIKRLSFASGHLGMVGGQTLDMQSEGAETNIDLDTLEKI 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL+ FA + +A L + E+LG++FQ+ DDLLD D K
Sbjct: 176 HNAKTGALLKFAVMAAVDIAEPENEVSNALESYSEHLGLMFQIKDDLLDIYGDEAK 231
>gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
Length = 334
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 78/241 (32%), Gaps = 19/241 (7%)
Query: 1 MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
M+ L +K L+ + + L L+ + + L + IRY L G K++R L
Sbjct: 1 MSHSLEAKDLKAYRQIVQDTLQSLM------LDKRTPQALYAPIRYTLEQEGAKRVRPVL 54
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + + +
Sbjct: 55 ALLM-------QAYLRPEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSVYAKYG 107
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDE 174
+ L A I++ + L N ++ GQ Q +++ +
Sbjct: 108 LTPAILSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIMEGQQLDLEYEQLDYVSK 167
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q + KT L+ A GAI++ S E E FG NLG+ FQL DD LD D
Sbjct: 168 EQYLEMIGYKTAVLIATATRFGAILSKGSATELESSYAFGWNLGLAFQLQDDYLDLYGDS 227
Query: 235 P 235
Sbjct: 228 E 228
>gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 342
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 18/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++ ++++T L + + + L++A GGK++R L A
Sbjct: 22 SALERRVLRGLEQVETRLLECAGEAEDPRLAEVAGHLIAA------GGKRLRPLLTLLGA 75
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+V + E IH SL HDD+ MD +R G +V+ ++ A+ +GN
Sbjct: 76 EFGDVRGEGGVEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVNARWGNTVAVRSGN- 132
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+++ + L + L +++ + F +
Sbjct: 133 ------WLLARAARLSASLAPEAIPLQAEASERLVRGQLRELVGPDGAERRLSHYFAVIS 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
K+ +L+ + GA+ A A E L +GE+LG+ FQ++DDLLD DL K+
Sbjct: 187 DKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSADLGKE 244
>gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 336
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 23/245 (9%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M L +L +++I+ ++ D L N RL + + +ALL GGK+IR L
Sbjct: 1 MTPEVLKQQLAAAAEQINQVIKDDLA-------AVTNPRLAAILEHALLAGGKRIRPLLT 53
Query: 59 TECASLFNVNHLTALRVGAA--------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
A L + T I + ++ +D+ +RRG+ TV+ +
Sbjct: 54 LLAAQLVQGHKGTENPQAGTATPWQQLAISFEYLHTASLLHDDVIDHAALRRGRETVNTR 113
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+D +AI+AG+ L A + + ++ + +Q ++
Sbjct: 114 WDNGSAILAGDFLHARALLLAGRAGGVPCLELIGTATQAMVDSEFIQQEAAASRDWREET 173
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + G + A + ++ L +G NLG FQ+ DDLLD
Sbjct: 174 YFAVLDGKTAALIAAACEA------GGVAAGGNPAQRRALHTYGGNLGRAFQIIDDLLDY 227
Query: 231 EEDLP 235
+
Sbjct: 228 LGEPG 232
>gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
Length = 322
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 16/221 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++D L + A + N + ++ L GGK+IR A L + A
Sbjct: 15 INDFLDREADQL----NGLVRDVAKHILGSGGKRIRPLFTLLFARALGYAKDDYLAIACA 70
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H +L+HDD +D+ +RRG+ H+ + I+AG+ LL A E+ +
Sbjct: 71 LELLHSATLLHDDY--LDDAELRRGRAASHLVFGRTETILAGDALLALANEMGARYGNPR 128
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ ++ ++ + + I KT L+ AC GA
Sbjct: 129 LSWLLAKGIMETATGEIEEIEFSRAPSLNR------ETYMRIIVGKTARLIECACRCGAA 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+A A+ +++ FG N+GI FQL DD LD + K
Sbjct: 183 LAGATPEQEDAAGEFGLNVGIAFQLVDDALDYASPTSETGK 223
>gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
Length = 271
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN + L++ ID L++L+ T + +R+++ +Y + GGK++R LV
Sbjct: 1 MN-EIQRALEKWRNIIDKELEELIKNT-------YEERVINVAKYIVNGGKRLRGALVML 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N AL A+E +H SL DD+ +D ++RRG+P+ + ++
Sbjct: 53 VNEALGGNPEDALPAALALELVHASSLSIDDI--IDLDFVRRGRPSAWVAKGVANTVMVS 110
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
N L+ +A ++ + D + + + E I
Sbjct: 111 NLLIPHAIMLVKRYGKRAIDKVVEVWWEVSKGEVW--------DVHGPPEGKGVEAYEAI 162
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT ++ + G + A + E L +G LG +Q+ADDL D E D
Sbjct: 163 IEAKTASMFALSAYLGGLAAG-EEERLEGLWRYGFLLGKAYQIADDLKDVEGDAS 216
>gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116]
Length = 323
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A +N + L+ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 323
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 15/223 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
++++++ K ++ L ++ + + L GGK++R +N
Sbjct: 9 NEIKDDLKIVEQELYQVVQTPDALLTETSVHLLN-------AGGKRLRPAFCLLGGKFYN 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ L + A+E IH SL+HDD+ +D RRG PTV ++ ++ G+ L
Sbjct: 62 YDIKKLLPLAVALELIHMASLVHDDV--VDASMTRRGMPTVKAKWGNRISVHVGDYLFAK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ +IS + ++ + Q+ + F K KT
Sbjct: 120 SLILIS------SYKEPLITRVLSDTSVKMSEGEIQQISTSFNVNQYLKDYFYRIKRKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L+ +C+ GA+ A + L +G +G+ FQ+ DD+LD
Sbjct: 174 LLISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILD 216
>gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 323
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + I+ L+ LL + H +A GGK+IR +V + +
Sbjct: 2 ATVTELLQPIEIDLEHLLKDLRDLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISKALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + E ++ +D RRG TVH ++D A++AG+ L
Sbjct: 62 AEGELSSKHRRLAEITEMIHTASLVHDDVLDEASTRRGVDTVHNRFDHKVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ D +++++ KT
Sbjct: 122 QASWHLANLDNLDVVKLLSRVIMDLAEGEVKQGIYRFDPNQSLDVYLEKSYC------KT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ ++++ S + L FG+ LG+ FQ+ DD+LD D L K
Sbjct: 176 ASLIANSAQAVGVLSNESDYHLKCLYNFGKQLGLAFQVVDDILDFTSDDKQLGK 229
>gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 323
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN S+L +++ + +++ + L + + ++Y + GGK+IR +
Sbjct: 1 MNIDQISELTEQDMEDVNSEIRTRLASEITLINKL--------VQYIVDSGGKRIRPMIT 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + IE IH +L+HDD+ +D ++RRG+ T +I + +++
Sbjct: 53 LLTARALCYKKTQHVTIATLIEFIHTATLLHDDV--VDKSHMRRGRKTTNIIFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ ++ + + + LQ D I
Sbjct: 111 VGDFIYTRAFQMMTELESLRILSLMADAVNIIAAGEILQL------THCNDPTITIDSYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
I KT L A +S AI+A A+ +++ LR +G +GI FQL DD+LD
Sbjct: 165 KIIYSKTARLFEVASQSSAILADANTCQEKALRNYGRYMGIAFQLVDDVLDYSASE 220
>gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 321
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 86/231 (37%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+QE+ ++ L++ ++ + + GGK++R L A +
Sbjct: 5 IQEDLAALEPALEEAIVSETPLITDVG-------MHLVSSGGKRLRPALFLLAAR-GGAS 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + A+ ++ +D RRG T + ++ AI++G+ + AF
Sbjct: 57 FDRARAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQIAILSGDYIFARAF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ + L Q + E + + KT
Sbjct: 117 KLVAEEGYDSS-----VYVKLAHLVCTLSEGEILQDHTVYQIPTGEDAYYERIRKKTADF 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ CE G + S + ++ +G ++G+ FQ+ DDLLD ED+ K
Sbjct: 172 LEICCELGGFIGGMSPADTAQMAEYGRDIGMAFQITDDLLDFRRSSEDIGK 222
>gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684]
gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684]
Length = 296
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + + ++++ L + +T D L A+RY+LL GGK+IR L
Sbjct: 1 MTAD--AYPDDLRRQVEEYLAAI---RFVAAETAGADGLEEAMRYSLLAGGKRIRPVLAL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + AL + AA+E IH YSLIHDDLP+MD+ +RRG+PT H + E AI+A
Sbjct: 56 ATARAIERDPAEALPIAAALELIHTYSLIHDDLPAMDDDDLRRGRPTCHKAFGENVAILA 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GL AF + + I + + + + G + D +
Sbjct: 116 GDGLYAEAFRHVLERQAGEPAAILAAVRELASATGVNGMVGGQYLDVTDSAPRDAAGLRH 175
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE-D--LP 235
+ +KTG L+ + ++A + + R F LG++FQ+ DD+LD D L
Sbjct: 176 LHSLKTGRLIGASIMCPLLLAPDQPRATIDSFRSFASELGVLFQIVDDILDVVGTDDALG 235
Query: 236 K 236
K
Sbjct: 236 K 236
>gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 337
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L L ++ IL ++ S ++ A R+ + GGK+ R
Sbjct: 19 DEELLRTLVVGLNEVEEILREVARSEVSAIE--------EAARHLVDAGGKRFRPMFTLL 70
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + AA + + ++ MD +RRG P+V+ ++D AI+ G
Sbjct: 71 AAQFGTGGRRDDVITAAAAVELVHLATLY-HDDVMDEATMRRGAPSVNARWDNSVAILTG 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L +A +++ T I ++ L + + G D +
Sbjct: 130 DYLFAHASRLVADLGTD-AARIIAETFGELVTGQMRETVGPGADDD------HVEHYLSV 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ A G + + AS E LR FG+ +G FQ++DD++D
Sbjct: 183 IAQKTGSLIATAGRFGGMFSGASPEHVEALRRFGDIIGTAFQISDDIIDITS 234
>gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
Length = 267
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
+RI+ L +L Q RL A+ YA++ GGK+IR F V+
Sbjct: 7 YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AIE +HCYSL+HDDLP+MD+ RRGKP+ H +DE TAI+ G+ L AFE+
Sbjct: 62 QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ K N+ + SL G Q L+ +++ Q+ ++ ++KTGAL
Sbjct: 122 LARDKNTRLINVLANACGSLGMAGGQQ-----LDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA+ A + ++LR G +G+IFQ DDL D + K
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEK 223
>gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032]
gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032]
Length = 338
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
R++ + L + + L + YAL GGK+IR L C+ +
Sbjct: 21 ARVEAAMRHDLTTALA----GCDPLLGEIVHYALFNGGKRIRPLLTVLCSRCCGRDDAEL 76
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ AA E +H +L+HDD+ +D RRG PTV ++ AI+AG+ L ++ +I
Sbjct: 77 YQLAAAFEYLHVATLVHDDV--IDRAEQRRGTPTVVARHGLTAAILAGDWLHAHSMHLIG 134
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I Q S+ + Q L G + + Q F + + KTG L+
Sbjct: 135 KLAGGRGLEIFCQATASMVNGEFAQLRLIGDITGTEQ------QYFEVIRQKTGNLIRST 188
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C GA+ A A + + L +G+ +G FQ+ DDLLD
Sbjct: 189 CSIGALFAGADEARRTALATYGDRIGAAFQVVDDLLDFLG 228
>gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
Boryong]
gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
Boryong]
Length = 338
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 18/236 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L + L ++ ++ ++ + + + + + Y GGK+IR L +
Sbjct: 16 LSNFLDKDMSEVNNVILNCISSSQEQL-------IYEVGTYFFNAGGKRIRPMLTIIISK 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LFN + L+ + AA+E IH +L+HDD+ +D +RR PTVH+++D T+I+ G+ L
Sbjct: 69 LFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFL 126
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +F+++ ++IR+ SL+ N + G + + I E + F + +
Sbjct: 127 FSQSFKLM-----IKSNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQA 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L +CE AI+++ S ++ FG LG+IFQ+ DD+LD + L K
Sbjct: 182 KTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFGNSDSLGK 237
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ D+ + + M + +R+ SA+RYA+L G K+ L L
Sbjct: 50 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 109
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+
Sbjct: 110 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 169
Query: 131 ISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTG 186
+ + + +++ L +G GM GQ + E +V + K G
Sbjct: 170 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 229
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA++ A +E+ LR +G +G+++QL DD+
Sbjct: 230 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 270
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ D+ + + M + +R+ SA+RYA+L G K+ L L
Sbjct: 48 SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL A+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+
Sbjct: 108 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167
Query: 131 ISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTG 186
+ + + +++ L +G GM GQ + E +V + K G
Sbjct: 168 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA++ A +E+ LR +G +G+++QL DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268
>gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 337
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 17/236 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + E ++ + LL +Q + GGK++R+ L A L
Sbjct: 18 LKDSVDEKLVLVEEKIKSKLLSDVDLVQKMTEYHID-------TGGKRLRALLTLGSAKL 70
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
AA + + + +D G IRRGK T++ + ++++ G+ LL
Sbjct: 71 CGYTKGGRDINLAACVEMIHGATLM-HDDVIDLGNIRRGKKTLNSIWGNHSSVLIGDYLL 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ FE++ + S + LQ G++ + E F I K
Sbjct: 130 SRCFEMMVDDGNIEVLKLLSSTSSKIAQGEVLQLQHKGEVD------MLEETYFKIITAK 183
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
T L A + GAI+++ EKE L +G+NLG+ FQ+ADD LD DL KK
Sbjct: 184 TAELFSAATKVGAILSNKETKEKEALEFYGKNLGLTFQIADDTLDYNSDLKFFGKK 239
>gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 330
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 16/239 (6%)
Query: 1 MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M+ L+ + I+ L ++ + Q A + A+ GK++R L
Sbjct: 1 MDKT--QALKVPFELINAQLYSVEERIRQQARAFDPAVEGYVAYAVE---SHGKRLRPAL 55
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ L + +E IH +L+HDD+ +D RRG+PT + ++ ++
Sbjct: 56 ALLAGGATGNICPSHLDLAVILELIHAATLVHDDI--LDGADKRRGQPTANAKWGNAISV 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L +A ++ +S + + +Q +
Sbjct: 114 LLGDCLFAHALKLSTSFPNGEISRRIAHAASEVCSGEIIQTQRRFDLKLSV------PDY 167
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I +MKT AL ACE GA++ A+ + LR FG LG +Q+ DD+LD D K
Sbjct: 168 YKIIEMKTAALFAAACELGALINEAAPEVIDALRIFGLQLGTAYQIYDDVLDLAGDEAK 226
>gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQTIGLAFQVLDDILDITSSTE 240
>gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
orientalis CIP 102891]
Length = 345
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K+IR L
Sbjct: 23 MDFKAIQALTADDMAKVNETIHAQLNSDVSLINQLGF--------YIVSGGGKRIRPLLA 74
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 75 VLSARALGYQGEAHTTSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 132
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M + E
Sbjct: 133 VGDFIYTRSFQMMTELGSLKILKLMSDAVNVIAEGEVQQLMNC------NNPDTTEESYM 186
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++D D
Sbjct: 187 QVIYSKTARLFEAATQIGAILNDAPEDVELALQNYGKYLGTAFQLIDDVMDYTSD 241
>gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
Length = 332
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ ++ D + + Q L+ A GGK++R L A + + + +
Sbjct: 25 VNAMIRDRMASEHAPRIPQVTAHLVEA------GGKRLRPMLTLAAARMCGYDGPYHIHL 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++
Sbjct: 79 AATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETG 136
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ +I + ++ LQ + +D + + + KT AL A E
Sbjct: 137 SLRVLDILANASATIAEGEVLQLTAAADLATTEDIY------IKVVRGKTAALFSAAMEV 190
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G +A K+ L +G+ LGI FQ+ DDLLD
Sbjct: 191 GGEIAGQDPAIKQALFDYGDALGISFQIVDDLLDYGG 227
>gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 9/224 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLT 71
++ L LL T + + L +A + GGK++R +V + +T
Sbjct: 9 APVEADL-QLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQEIT 67
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A ++ +D +RRG PTVH + A++AG+ L A +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASWHL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + SQ+++ L LQG+ + + KT +L+
Sbjct: 128 AHLDSLTVVKLLSQVIMDLAEGEILQGLNRFDSSLSIEVY------LDKSYYKTASLLAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + ++++ +S+ + L +G +LG+ FQ+ DD+LD
Sbjct: 182 SARAASVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTGSEE 225
>gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 289
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 12/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+ I+ + D L T ++ +++Y+L GGK++R L S+FN +
Sbjct: 4 NRYEELIN--IIDQNLYTNIPTTDDFQKKIYESMKYSLSTGGKRVRPILALVSYSIFNDD 61
Query: 69 HLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+E IH YSLIHDDLP+MDN IRRGKPT H Y+E AI+AG+GLL
Sbjct: 62 SKNFSEIIPFAVALEYIHTYSLIHDDLPAMDNDDIRRGKPTNHKVYNEAIAILAGDGLLN 121
Query: 126 YAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
A E+++ +K + + + G+QGM+GGQ +DI + +V
Sbjct: 122 LAAEVVAKELEGITDPIKLKRAIKSFRYIFSSSGIQGMVGGQTIDIDLSVDEMSLEEVET 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ K+KTGAL+ GAIM A+ E + + E LG+ +Q+ DD+LD E+DL
Sbjct: 182 MYKLKTGALIKAPLAVGAIMGGATPEELISIEGYAEQLGLQYQIKDDILDYEDDL 236
>gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
Length = 498
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 176 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 227
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 228 VLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 286 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 340
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A S +++ L+ +G LG FQL DDLLD D L
Sbjct: 341 -VIYSKTARLFEAAAQCSGILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 399
Query: 236 K 236
K
Sbjct: 400 K 400
>gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ +++ + L S + + GGK+IR L
Sbjct: 1 MDFKAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRIRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARALGYQGQAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEVQQLMNCNDPDTTE------ESYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A + L+ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILNDAPSEVETALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH]
gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH]
Length = 281
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG-AA 78
++D + + + H + L GGK+ R L+ + + + A
Sbjct: 1 MEDFIKKNLIKAPSFHPYYEKALNEMLLAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYA 60
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MDN +RRG PT+H+ YDE+TA++AG+ L TYAFE++S
Sbjct: 61 IELIHTYSLIHDDLPTMDNADLRRGHPTLHVTYDEITALLAGDALNTYAFEVLSKSPFSS 120
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I +LS G + +++ ++ ++ + KT L+ + + GA+
Sbjct: 121 DVKIELIKILSENAGAGGMVLGQAIDCYFENKKLNLDELKFLHLNKTAKLIAASLQMGAV 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + +E+L FG +LGI+FQ+ DD+LD
Sbjct: 181 IVNLDKKLQEKLYNFGIDLGILFQVQDDILDVT 213
>gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Paenibacillus polymyxa E681]
gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Paenibacillus polymyxa E681]
Length = 324
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 15/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+++ I+ L + T + L GGK++R V +
Sbjct: 10 LKKDMNFIEEELYRSIDSTEPLINDTSLHLLK-------AGGKRLRPVFVLLGGKFGEYD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
R+ +E IH SL+HDD+ +D+ +RRG+PTV ++D A+ G+ + A
Sbjct: 63 LDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARAL 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I + + S+ ++ ++ Q + ++ + KT L
Sbjct: 121 SIAAGLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLR------IRRKTALL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +C+ GA+ A A ++ L +G N+G+ FQ+ DDLLD K
Sbjct: 175 IAVSCQLGAMAAGARESVNSLLYSYGYNVGMAFQIQDDLLDLCGTEKK 222
>gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A N
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALNYQGN 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + + + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMAAATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A AS+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
Length = 326
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I++ L D + S + + L + + GGK++R L+ A F
Sbjct: 4 LSLIKQPIESELSDFIELFNSSLH-HDDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQ 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SLIHDD+ +D RRG+ +V+ Y+ A++ G+ +L+ A
Sbjct: 63 ISSVTQHAAVGLELLHTASLIHDDV--VDESSQRRGQASVNASYNNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S L ++L +L+ LQ +IQ E I E I KT
Sbjct: 121 LLQVSYTNANLIVRYLAELGQTLSDGEILQL------SNIQREQITEEAYLQIIARKTAI 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L GA A AS+++ R FG++LG+IFQ+ DD+ D D K+
Sbjct: 175 LFEICAAIGAESAGASKDDVALARAFGKDLGMIFQIRDDIFDYF-DSEKE 223
>gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 7/220 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
D +L + S + L + I+Y L +GGK+IR L+ +LF + L
Sbjct: 5 DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H Y+L+HDDL MDN +RRG+PTVH +++ A+++G+ +L A++ ++
Sbjct: 65 ACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECD 122
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ L + +R +L G Q + + + E + + ++KT L+ A +
Sbjct: 123 SHLAEVLRLFTETALEIGEGQQMDMEFETRNDVRE----EEYIEMIRLKTSVLLACAMKI 178
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A A ++ + L FGE +G+ FQL DD LD D
Sbjct: 179 GALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGDPA 218
>gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ ++D + L S + Y + GG K++R L
Sbjct: 1 MDFKAIQALTADDMAKVDKTILAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSAKALGYQGEGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANATFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + LQ M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILKLMSHSVNIIAEGEVLQLMNCNDPETTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GA++ AS + ++ +G+ LG FQL DD++D D K+
Sbjct: 165 QVIYSKTARLFEAATQIGAMLCDASPEVERAMQNYGKYLGTAFQLIDDVMDYTAD-GKE 222
>gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 343
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++L E ++ L D + A + L++A GGK++R FL
Sbjct: 19 DPALAARLAERMAVVEQSLADAVAN-ADRLADDVAHHLVAA------GGKRLRPFLTLLA 71
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + +E H SL HDD+ MD+ +RRG P+VH + AI+ G+
Sbjct: 72 GELGDGARTELVDAAVVVELTHLASLYHDDV--MDSAPLRRGAPSVHSVWGNSVAILVGD 129
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++ + + + + +
Sbjct: 130 LLFARASARVAGLGPEAVRLQAETFERLCLGQLH-------ETTGPAEGEDPAQHYLQVL 182
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT +L+ + GA+ A + E + +GE +G+ FQ+ADD+LD + K
Sbjct: 183 ADKTASLLATSARLGAMFGGAPAEQVEVVAAYGEKVGVAFQIADDVLDLASTGSESGK 240
>gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
Length = 322
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 17/230 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
S + + + +++ + L + Y + GGK++R LV L
Sbjct: 8 STVSSDFEAVNSTIHRYLASDV--------PMVEKVAEYIIDSGGKRMRPLLVLLAGQLN 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 60 GQLTDRHHLLAAIIEFLHTATLLHDDV--VDKSDMRRGRATANANWGNAPSVLVGDFLYA 117
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+FE++ SQ + +Q M + Q + K KT
Sbjct: 118 RSFEMLVELGNFDVMQSLSQATRVIAEGEVMQLMNVKNPDITE------AQYMEVIKGKT 171
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + E+ +++ + L +G NLG+ FQL DD LD D
Sbjct: 172 AILFKASAETSGLISGYDRTSVNALADYGLNLGLAFQLIDDALDYAGDAE 221
>gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b]
gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARALNYQGSQHITNAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 112 GDFIYTRAFQMMTSMGSLKILALMSEAVNVIAEGEVLQLMNVNDPDITEENYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A A+ +++ L+ +G +G FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYIGTAFQLIDDLLDYSADGETLGK 225
>gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 324
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 11 ENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ K + + ++LL + + + + +L A Y L GGK++R L L
Sbjct: 2 KIFKPFEVVREELLSVEEFSRELLSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVEA 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ V +E +H +L+HDD+ +D +RRG+P+V+ + A++ G+ + A
Sbjct: 62 PLDRLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+++ ++ + + LQ G + + + F I KT +
Sbjct: 120 IYVLAVYGGPEVLKTAAKTVQDMAEGELLQLEKIGDINLTE------EEYFDIIYRKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ CE GAI+ AS+ E++ L+ +G +G FQL DD D D
Sbjct: 174 LLSTCCECGAIVGGASEKERKALKDYGTYIGYAFQLVDDAFDYISDEK 221
>gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
Length = 301
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ A+ YA+ GGK +R FLV E A L V A + AIE +H YSLIHDDLP
Sbjct: 38 PVKTPIPEAMMYAVRGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLP 97
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT-- 151
MD+ +RRGKPTVH ++DE TA++ G+ L AFE+I + + ML++
Sbjct: 98 CMDDDDLRRGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKVVLAHMLAVDAG 157
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ G + + ++ +Q KTGAL+ +AC +G +A A + +R
Sbjct: 158 ERGMVGGQAADIAAESAAAALTLGEIESLQAKKTGALVEWACAAGPRIAGADE---MPMR 214
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
+G LG FQ+ADD+LD D
Sbjct: 215 QYGRALGRAFQIADDILDVTGDAE 238
>gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 29 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 80
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 81 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 139 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 193 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
9-941]
gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19]
gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str.
Tulya]
gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str.
86/8/59]
gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis
M163/99/10]
gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94]
gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1]
gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1]
gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis
M292/94/1]
gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33]
gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94]
gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str.
C68]
gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99]
gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. NF 2653]
gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO1]
gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
9-941]
gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19]
gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. BO1]
gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella sp. NF 2653]
gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28]
gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 338
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 25 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 78 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 136 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 239
>gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
Length = 300
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 17/239 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+RI+ L L T ++ +L+ A+RY LL GGK++R +L + +
Sbjct: 8 AHYQERINDFLAAKLEGL-----TINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSAD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V A+ECIH YSL+HDDLP+MD+ +RRGKPT H +DE TAI+AG+ L T AF
Sbjct: 63 LNDIDAVAGALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAF 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNI-----GLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
+I+++ + + + G QGM GGQ L + I ++ ++
Sbjct: 123 DILANHTFSMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLH 182
Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTGAL+ + A+ + ++ K L + + +G+ +Q+ DD++D +L K
Sbjct: 183 SLKTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGK 241
>gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
Length = 355
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 11/233 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L ++L + L D + A+ + + A + L LGGK +R V
Sbjct: 29 PDLAARLAALQSWVQRDLRDFEAELATLPKGARA--VQKAAHHLLELGGKHLRPMCVALA 86
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + ++ A+E +H +L+HDD+ + + RRG PT Y ++ AG+
Sbjct: 87 AKMGTGFDAHGRQLAMAVELVHTATLLHDDVVDIGDS--RRGVPTARTIYGNAASVFAGD 144
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A I + ++ + LQ G + D ++ + +
Sbjct: 145 WLLVDALRRIRQTGLSDLLDRMLAIIEEMILAESLQLERRGSLGDSEEVYFQ------VV 198
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT AL +A +G ++ L +G +LG+ FQ+ DDLLD D
Sbjct: 199 EGKTAALFRWAMYAGGRAGGLDEDACLALERYGRHLGVAFQVVDDLLDFSGDE 251
>gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
Length = 323
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
L E + D +Q+ + Y + GGK++R L+ A N
Sbjct: 4 LDEIRDLVADEFDTTNQIIIDRLQSDVV-LVNQVGHYIVAAGGKRLRPMLLLLAAKSLNY 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +
Sbjct: 63 QGKFHPNLAAVIELIHTATLLHDDV--VDESDLRRGRQTANAMFGNQASVLVGDYLYSRS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + S+ + LQ M ++ D +DE + + + KT
Sbjct: 121 FQMMVEVGEMRVMEVLSETTNEVAAGEVLQLM------NVNDPDVDEASYYQVIERKTAI 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L A + AI+A AS++ +E LR +G LG FQL DD LD D
Sbjct: 175 LFAAATQLAAILAGASKDVEEGLREYGLQLGNAFQLVDDALDYAADTE 222
>gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128]
Length = 336
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLVAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + ++++D A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASANVRWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADETVVHVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 296
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ ++ I+ IL L +Q ++ A+ Y+L GGK++R L+ E
Sbjct: 2 NFRDEKRKKTEEIEQILKAYLP-----VQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETF 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+AG+
Sbjct: 57 QMFGGAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDA 116
Query: 123 --LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+ + + + + + L G+ GM+GGQ++D+ + T+
Sbjct: 117 LLNYAFETACTAFEEAPEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILS 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A GAI+A A + E + + +GI FQ+ DD+LD
Sbjct: 177 FIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTSTEE 233
>gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513]
Length = 338
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 25 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 78 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 136 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 239
>gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457]
gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str.
870]
gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13]
gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str.
292]
gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str.
Ether]
gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1]
gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
Length = 340
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 27 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 79
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 80 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 137
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 138 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 191
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 192 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 241
>gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus]
Length = 336
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLVAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++D A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A + E L +GE LG+ FQLADD+LD D
Sbjct: 176 LSGKTGSLVAVSSRFGAMMSGADETVVEVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
Length = 340
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 27 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 79
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 80 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 137
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 138 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 191
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 192 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 241
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 303
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKKITQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQTIGLAFQVLDDILDITSSTE 240
>gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
Length = 324
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+++ + + + +L Q + N + RY L GK+IR LV A +
Sbjct: 3 IKDVTASVADEI-ELFQQKYKAVLHSSNTLVDKVTRYVLRQQGKQIRPALVLLSAKICGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
R +E +H +LIHDD+ +D +RRG +++ + +++ G+ LL+
Sbjct: 62 VTEVTYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
K + S + ++ LQ + I E + KT +
Sbjct: 120 LLYSLDHKDYASLHTVSDAVRRMSEGEILQI------QKTRSLDISEEDYISVISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ +C GA A ++ +GE LG+ FQ+ DDLLD D K
Sbjct: 174 LIASSCAMGAASATDDDTMIAGMKRYGEYLGLAFQIRDDLLDYTGDSKK 222
>gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
Length = 340
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 27 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 79
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 80 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 137
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 138 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 191
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 192 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 241
>gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
Length = 324
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 10/222 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74
+ L + + ++T+ N + +RY L GK+IR LV A + R
Sbjct: 10 VSEELKSFRQKYKTALETE-NSLIDKVVRYILKQQGKQIRPLLVMLGAKVCGGVEEKTYR 68
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
E +H +LIHDD+ +D +RRG +++ + +++ G+ +L+
Sbjct: 69 AAIMAELLHSATLIHDDV--VDGAEMRRGIASINAVWKNKISVLIGDYMLSKGLLF---- 122
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L + L + T + Q+ + I E + KT +L+ +
Sbjct: 123 --SLDNKDYLFLHMVSTAVRRMSEGEILQIQKTRSLDITEEDYLRVISDKTASLLSTSSA 180
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA + + L+ +GE LG+ FQ+ DDLLD D K
Sbjct: 181 MGAASVTDDEVKINALKSYGEYLGLAFQIRDDLLDYTGDSKK 222
>gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
Length = 323
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ +++ + L S + + GGK+IR L
Sbjct: 1 MDFKAIQALTADDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRIRPMLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ESYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILNDAPEDVERALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 29 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 80
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 81 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q + +
Sbjct: 139 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KGKYNMEQNLRTYL 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 193 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493]
Length = 267
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
+RI+ L +L Q RL A+ YA++ GGK+IR F V+
Sbjct: 7 YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AIE +HCYSL+HDDLP+MD+ RRGKP+ H +DE TAI+ G+ L AFE+
Sbjct: 62 QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ K N+ + SL G Q L+ +++ Q+ ++ ++KTGAL
Sbjct: 122 LARDKNIRLINVLANACGSLGMAGGQQ-----LDLEFKNKEATPEQIEIVHRLKTGALFS 176
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA+ A + ++LR G +G+IFQ DDL D + K
Sbjct: 177 TAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEK 223
>gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
Length = 323
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 111 VGDFIYTRAFQMMTSLGSIKVLEVMSEAVNVIAEGEVLQLM------NVNDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A AS+ ++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
Length = 322
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++ + +D ++ L + Y + GGK++R +V A F+
Sbjct: 10 VADDMRSVDALIQQRLHSDVVLINQLG--------HYIINSGGKRLRPMVVLLSARAFDY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + A
Sbjct: 62 QGSYHIDIAAIIEFIHTATLLHDDV--VDSSELRRGRKTANNIWGSEASVLVGDFLYSRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + I ++ ++ +Q + + E I + KT
Sbjct: 120 FEMMVGVDSMRVMEILARTTNTIAEGEVMQLLNC------HEPDTTEECYLEIIRSKTAK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A + GA++ H S E++ + +G +LG FQL DD+LD DL K
Sbjct: 174 LFEAATQLGAVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGK 225
>gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 320
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ S + ++++ ++ D L ++ Y + GGK++R LV A
Sbjct: 3 DIRSAVAAEFEQVNHLIIDQLHSDVDMVENIG--------HYIVDAGGKRLRPLLVLLTA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ F ++ A IE IH +L+HDD+ +D +RRG+PT + ++ +++ G+
Sbjct: 55 AAFGRCGPDQIKFAAVIEFIHTATLLHDDV--VDISSLRRGRPTANAEFGNAPSVLVGDF 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T AF+++ + ++ LQ + G + Q +
Sbjct: 113 LYTRAFQLMVQLGDMDILTHMANTTNTIAEGEVLQLVRAGNADTTEQ------QYLDVIT 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L C A + H + + + FG NLGI FQ+ DD+LD E D
Sbjct: 167 RKTAILFAAGCYGAATLCHQESSVCQGMHSFGLNLGIAFQMIDDILDYEGDPA 219
>gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 334
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 16/237 (6%)
Query: 2 NGGLPSKLQENS---KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
L L + K +D ++ L + + Q + ++ A GGK++R L+
Sbjct: 7 TNDLSQILTPIALDFKALDEVIRQRLASKVALI-DQISTYIIQA------GGKRVRPALL 59
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A T + + ++ +D +RRG+ T + + +++
Sbjct: 60 MLVAKALANGKQTPHILEMSAVVEFIHTATLLHDDVVDESTLRRGRKTANAAFGNAASVL 119
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AF+++ P I S ++ LQ + +
Sbjct: 120 VGDFLYSRAFQMMVDPNDLRVMQILSDATNTIAEGEVLQLLNMNDPEVDE------ESYL 173
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KT L + E GAI+A+A+ ++E+ FG ++G FQL DDLLD +
Sbjct: 174 QVIRYKTAKLFEASTELGAILANATNAQREQAAAFGRHIGTAFQLMDDLLDYTANAA 230
>gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R]
gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316]
gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909]
gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B]
gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515]
gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae
2603V/R]
gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909]
gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515]
gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B]
gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 9/229 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
++ID + QT S + L+ AI Y++ GG K+IR ++ E F V +
Sbjct: 4 IEKIDEAIHRYYKQTHSVVSPD----LIKAILYSVDGGGKRIRPRILLEILEGFGVELID 59
Query: 72 -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
V AA+E IH SLIHDDLP+MDN RRG+ T H ++DE TA++AG+ L F++
Sbjct: 60 GHYDVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDL 119
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + +R +LS++ + +++ + + +I KTG L+
Sbjct: 120 VVKAGFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLA 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + I+A S+ K +L G +G FQ+ DD+LD +L K
Sbjct: 180 YPFVAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228
>gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
Length = 348
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 29 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 80
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 81 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 139 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 193 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
Length = 283
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 9/228 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ + L D L T+ + + L + + GGK+ R L+ +N L +
Sbjct: 1 MQNFEQFLLDNLP-TSKSIHPTYESALQNMLE---AGGKRFRPALLLGVVKAYNPLMLES 56
Query: 73 LRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R A A+E +H YSLIHDDLP+MD+ +RRGKPT+H+ +DEVTAI+ G+ L TY+FE++
Sbjct: 57 ARHAALAVEFLHTYSLIHDDLPAMDDSPLRRGKPTLHVSFDEVTAILVGDALNTYSFEVL 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + ++ L+ + + +++ + + + KT L+
Sbjct: 117 ANAPFSDETRVKLIRELASNGGLNGMVLGQAIDCYFENKPLAVEDIKTLHTNKTAKLIAA 176
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ + GA++ ++L FG LG++FQ+ DD+LD ++ K
Sbjct: 177 SLKMGALIVGRDDA-ADKLYDFGIKLGLLFQIQDDILDVTQSSQEAGK 223
>gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. DR1]
Length = 303
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATATSKMVCGQVLDLQAEAKQIAQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQTIGLAFQVLDDILDITSSTE 240
>gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405]
Length = 291
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQIKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49]
Length = 291
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQIKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 323
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + + L +A + GGK+IR +V + + +L
Sbjct: 11 VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDISLG 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D IRRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIMDLAAGEIQQGLNRFDTNLSI------ETYLKKSYYKTASLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ I+++ S L +G++LG+ FQ+ DD+LD L K
Sbjct: 184 KAAGILSNVSSESANNLYNYGKDLGLAFQIVDDILDFTGSMDTLGK 229
>gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 336
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + + ++ L D + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVHNGLSAVEAGLLDATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++ A++ G
Sbjct: 65 AAQFGDPYSPGVVPAAVVMELTHLATLYHDDV--MDEADVRRGVPSANARWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + ++ +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPREGGDPIEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ + GA+MA A + + L +GE LG+ FQLADD+LD + K
Sbjct: 176 IGGKTGSLIAVSGRIGAMMAGADERIVDTLTQYGERLGVAFQLADDVLDIASHSHESGK 234
>gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 321
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+R + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 VPTADFEMVRDASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSNVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G I++ S+++ E+L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
Length = 291
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE +++ L++ + Q L A+ Y++ GGK+IR +L+ E V
Sbjct: 4 QEKLALVESALEEF------YGDQQLAANLREAVLYSIHAGGKRIRPYLLLEVLESLQVP 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG T H ++ E AI+AG+ L
Sbjct: 58 ITIAHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGSLTNHKKFGEALAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL+ ++ + + ++ ++ I KTG
Sbjct: 118 YALIAQANLPNEIKVDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ F ++ ++A +N + +L+ GE +G+ FQ+ DD+LD
Sbjct: 178 LLAFPFQAAGVIAELDENLQIQLKTVGELIGLAFQVRDDILDVTASFE 225
>gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 325
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 12/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L++ S+ D + + + + ++ L++A GGKKIR L + +
Sbjct: 8 LRKYSEMADERIRESISDITPETLLRASEHLITA------GGKKIRPSLALLSSEAVGGD 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A V AAIE IH +SLIHDD+ MD+ IRRG+P VH+ + E AI+AG+ L + AF
Sbjct: 62 PGDAAGVAAAIELIHTFSLIHDDI--MDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAF 119
Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E +I + +++ + ++ S Q + G + + + KT A
Sbjct: 120 EAVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGFEERLDVTE---EEYMEMIYKKTAA 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++GAIM S E L +G +G+ FQ+ DD LD D
Sbjct: 177 LIAAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEE 224
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Query: 1 MNGG-----LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
MN + +R + L +L RL A+RYA+LGG K++R
Sbjct: 1 MNTDSKLPSFSEWTAQIQQRTEVALAGVLPD-----AAIAPHRLHEAMRYAVLGGGKRVR 55
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
L +L R+ A+E IH YSL+HDDLP MD+ +RRGKPTVH+++DE
Sbjct: 56 PLLAHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEA 115
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID- 173
TA++AG+ L T AF++++ + ++ L G +GM GGQ +D+
Sbjct: 116 TALLAGDALQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRL 175
Query: 174 -ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ + KTGAL+ A GA +E RL + + +G++FQ+ DDLLD E
Sbjct: 176 GREELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAE 235
Query: 232 EDLP 235
D
Sbjct: 236 ADTA 239
>gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
Length = 290
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +KL +K + L ++ Q L++A+ Y L GGKKIRS ++ + +
Sbjct: 1 MQNKLARIAKDTNLFLKQF-------IKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGA 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F +N+ T + +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN L
Sbjct: 54 IFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LT AFEI+ S ++ + I+ L+ L+ G G+ GGQ LD + + + ++++ ++
Sbjct: 114 LTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDME 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L F C I+ S + + G N+G++FQ+ADDL+D +
Sbjct: 174 IKKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224
>gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 498
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 176 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 227
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 228 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 286 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 340
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 341 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLG 399
Query: 236 K 236
K
Sbjct: 400 K 400
>gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
Length = 338
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ +R++ ++ + N + S GGK++R L AS+F
Sbjct: 25 AADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASMFGYEG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF
Sbjct: 78 DAHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E G I+A AS+ ++ L+ +G NLG+ FQL DD+LD DL K
Sbjct: 190 AAAAEVGPIVASASRADRNALKSYGMNLGLAFQLVDDVLDYGGSSSDLGK 239
>gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
Length = 327
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
M L + ++ + + +D + L + Y + GG K+IR
Sbjct: 1 MTTQLSLEQILTLVKADMQAVDQAILAQLNSDVVLINQLG--------HYIISGGGKRIR 52
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ A+ + A +E IH +L+HDD+ +D +RRG+ T + ++
Sbjct: 53 PLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETANARFGNA 110
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+++ G+ + T AF++++S ++ + S + Q M + ++
Sbjct: 111 ASVLVGDFIYTRAFQMMASLRSLDVLQVMSDATNVIAEGEVQQLMNVNDPETTEANYMQ- 169
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L A + AI++ A Q +R +G LG FQL DD+LD +
Sbjct: 170 -----VIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDILDYSANA 224
Query: 235 P 235
Sbjct: 225 E 225
>gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination
protein c3) [Paenibacillus polymyxa SC2]
gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Paenibacillus polymyxa SC2]
Length = 324
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 15/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+++ I+ L + + L GGK++R V +
Sbjct: 10 LKKDMNFIEEELYRSIDSREPLINDTSLHLLK-------AGGKRLRPVFVLLGGKFGEYD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
R+ +E IH SL+HDD+ +D+ +RRG+PTV ++D A+ G+ + A
Sbjct: 63 LDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARAL 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I + + S+ ++ ++ Q + ++ + KT L
Sbjct: 121 SIAAGLPNPDIHRVLSKALVQMSIGEMEQIRDFFNVDQSVRNYLLR------IRRKTALL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +C+ GA+ A A + L +G N+G+ FQ+ DDLLD K
Sbjct: 175 IAVSCQLGAMAAGARERVNSLLYTYGYNVGMAFQIQDDLLDLCGTEKK 222
>gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella melitensis bv. 1 str. 16M]
gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella melitensis bv. 1 str. 16M]
Length = 362
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 49 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 101
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 102 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 159
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 160 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 213
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 214 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 263
>gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment']
Length = 325
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 15/223 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
++++ LLQ S + + IRY L GGK++R L+ A L N +
Sbjct: 15 ALVEERLLQDIS----GDVELISEIIRYVLKSGGKRVRPALLLLSAKLCGYNGGSRHIDL 70
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A + + + +D RRG P+ + + +++AG+ L + +++
Sbjct: 71 AVVAEYMHAATLI-HDDIIDRADKRRGLPSANSTWGSQISVLAGDFLYARSLQMLVIDGD 129
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + + + + G + + I KT AL+ AC +G
Sbjct: 130 LAVMRAFADATVRMIEGQVREVQMAGNLDLTY------DEYLDIITSKTAALISVACRTG 183
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A++A E L FG ++GI FQL DD LD + L K
Sbjct: 184 ALIAGRQPEEVAALTEFGLDVGIAFQLVDDALDFVAEEDRLGK 226
>gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 326
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 8/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
L L + +D L++++ ++ +L AI GGK+IR +V +
Sbjct: 3 LEETLNIPLRTVDRELENMVKYDRDVPRS---SQLAKAIVELIRSGGKRIRPLMVIVGSR 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + A ++ +D+ +RRG+ +HI+ A+ GN +
Sbjct: 60 -FGPDPDEKKVWRLAAAAEFIHAASLIHDDIIDDSPMRRGQKAMHIKLGVSGALHVGNYM 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
E+IS + + + L+ T + + D + + K
Sbjct: 119 SARVIELISVYSAEREKFVYDLSSLATTKLCLGEYQQLSH---LFDYDVTIDEYLEKSKN 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT LM + GA A A E L FGE LG+ FQ+ DD+LD + K
Sbjct: 176 KTAQLMATCLQIGAKAAGADTETAELLYSFGEKLGMSFQIRDDVLDYTQSAEK 228
>gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
Length = 328
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 15 RADMARVNELILSCAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 67
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 68 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 126 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 180 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSATDLGK 229
>gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2;
Short=HEPPP synthase subunit 2; AltName: Full=Spore
germination protein C3
gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis]
gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. SMY]
Length = 348
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 29 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 80
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 81 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 139 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 192
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 193 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 252
Query: 236 K 236
K
Sbjct: 253 K 253
>gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12]
gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12]
Length = 326
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ E+ + +D + L + + T Y + GG K++R L+ +
Sbjct: 14 ITEDMESVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLVSQALGF 65
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + A
Sbjct: 66 RGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGDFLYSRA 123
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ S + NI + + LQ + D +DE + + + KT
Sbjct: 124 FQMMVSVGSMRILNILADATNVIAEGEVLQLLNM------HDPEVDEQRYLQVIRFKTAK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A GA++A A N +E + G + G FQL DDLLD +L K
Sbjct: 178 LFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 229
>gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II
[Paenibacillus sp. HGF5]
gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II
[Paenibacillus sp. HGF5]
Length = 324
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+++ I+ L L ++ + +++ GGK++R V + +
Sbjct: 10 LKKDMDVIEREL--YLS-----VEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V +E IH SL+HDD+ +D+ RRGKPTV ++D A+ G+ + A
Sbjct: 63 IDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKAL 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ + K I ++ M+ ++ Q D + D + + + KT L
Sbjct: 121 QLTTHLKQPEIHQILAKAMVEMSIGEMEQI------RDFFNTEQDVRRYLLRIRRKTSLL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ +C+ GA+ A A + L FG N+G+ FQ+ DDLLD K+
Sbjct: 175 IAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQDDLLDLCG-TEKQ 222
>gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
Length = 324
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+++ I+ L L ++ + +++ GGK++R V + +
Sbjct: 10 LKKDMDVIEREL--YLS-----VEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V +E IH SL+HDD+ +D+ RRGKPTV ++D A+ G+ + A
Sbjct: 63 IDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKAL 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ + K I ++ M+ ++ Q D + D + + + KT L
Sbjct: 121 QLTTHLKQPEIHQILAKAMVEMSIGEMEQI------RDFFNTEQDVRRYLLRIRRKTSLL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ +C+ GA+ A A + L FG N+G+ FQ+ DDLLD K+
Sbjct: 175 IAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQDDLLDLCG-TEKQ 222
>gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
sp. 3_2_53FAA]
gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
sp. 3_2_53FAA]
Length = 340
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 18 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 69
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 70 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 127
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 128 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 182
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 183 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 241
Query: 236 K 236
K
Sbjct: 242 K 242
>gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II
[Streptomyces sp. Tu6071]
gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II
[Streptomyces sp. Tu6071]
Length = 326
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L D + +A L GGK+ R LV
Sbjct: 3 DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++D A++ G+
Sbjct: 56 AQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDSANARWDNSVAVLTGD 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A +I++ + +T I + +D +
Sbjct: 114 FLFSRASQILAGLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVDHYLDVL 166
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+M+ A E L +GE LG+ FQLADD+LD D
Sbjct: 167 SGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASDS 219
>gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
Length = 336
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DRTLEADTQAGLTAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVLL 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + + +E H +L HDD+ MD +RRG + ++++ A++ G
Sbjct: 65 AAQFGDPHAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSANVRWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I++ + +T I + +D +
Sbjct: 123 DFLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVEHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A ++ L +GE LG+ FQLADD+LD D
Sbjct: 176 LAGKTGSLIAVSGRFGAMMSGADESIVSILTQYGERLGMAFQLADDVLDIASDS 229
>gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
SPB78]
gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
SPB78]
Length = 336
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L D + +A L GGK+ R LV
Sbjct: 13 DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++D A++ G+
Sbjct: 66 AQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDSANARWDNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A +I++ + +T I + +D +
Sbjct: 124 FLFSRASQILAGLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGRDPVDHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+M+ A E L +GE LG+ FQLADD+LD D
Sbjct: 177 SGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASDS 229
>gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella ceti str. Cudo]
gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella ceti str. Cudo]
Length = 363
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 50 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 102
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 103 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 160
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 161 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 214
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 215 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 264
>gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158]
Length = 324
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIING-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N ++ + A ++ +D +RRGK T + + +++
Sbjct: 54 LAARAIN-DYAGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 113 GDFIYTRAFQMMTSLGSLKVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYMR 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI+A AS E++ L+ +G +G FQL DDLLD D L K
Sbjct: 167 VIYSKTARLFEAAAQSSAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSADGETLGK 226
>gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703]
Length = 323
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALGYQGT 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + S + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A+++ A++ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 323
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALGYQGT 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + S + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMSDATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A+++ A++ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
Length = 315
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 6 PSKLQE---NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
P++L+E KRI+ L ++L + ++L AI + L GK++R L
Sbjct: 3 PTRLEETTRLQKRIEQRLGEVLPACL-----EGQEQLRDAIATSVLAPGKRLRPLLAVLT 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A N + A+ G AIE IH SL+ DDLP MD+ +RRG+P H+ Y E TA++A
Sbjct: 58 AIDLNGDVEAAIEGGCAIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVI 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+++ AFE++++ + R++ + +L +G G++ GQ D++
Sbjct: 118 AMISRAFELLAAAPSLNP-EQRTRSVAALGKAVGTSGLVAGQFADLKGGSGSTDAAARTN 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+KTGAL A E G I + A + + L F LG+ FQL DDLLD
Sbjct: 177 ALKTGALFLAAVEIGMIGSGAPRETRRELEAFARELGLAFQLLDDLLD 224
>gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 346
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 15 RIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
R++ +LD + + + + + A R+ + GGK+ R LV A + +
Sbjct: 27 RVEASVLGVLDRVETSLRASVASADP-LVTEASRHLVEAGGKRFRPLLVALGAQFGDPDT 85
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +E H +L HDD+ MD +RRG P+ + ++ AI+ G+ L A +
Sbjct: 86 DQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAAD 143
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I++ ++++ L H + + + + KTG+L+
Sbjct: 144 -IAADLGPEAVRLQARTFARLVHGQIAETV-------GPRDTDPVAHYLHVIAEKTGSLI 195
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ G + A+ E L +GE +G+ FQL+DDLLD +
Sbjct: 196 ATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLSDDLLDIASES 240
>gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
Length = 294
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN ++ ++ I+ +L+ + H +L + Y+ GGK++R ++
Sbjct: 1 MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 55
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+
Sbjct: 56 AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT AF+ +++ + L+ Q ++ + Q+
Sbjct: 116 TGDALLTIAFQWLAATGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLK 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ ++KTG ++ F ++ +A + F +N G+ FQ+ DD++D E +L
Sbjct: 176 KLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVELG 235
Query: 236 K 236
K
Sbjct: 236 K 236
>gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Limnobacter sp. MED105]
gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Limnobacter sp. MED105]
Length = 330
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +++D ++ L S + Q +D +++A GGK++R LV A
Sbjct: 15 IAADMQQLDQVIRTSLHSEVSLIN-QISDYIINA------GGKRLRPALVILTARALGAT 67
Query: 69 HLTALRVGAAIECI-HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + ++ +D +RRG+ T + +Y A++ G+ L + +
Sbjct: 68 QQQMQQTIELAAIVEFIHTATLLHDDVVDESDMRRGRLTANAEYGNSAAVLVGDFLYSRS 127
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ ++ S+ ++ LQ + + + + KT
Sbjct: 128 FQMMVKIGLMDVMDVLSEATNTIAEGEVLQLLNCKDPDVTE------ARYMQVIDFKTAK 181
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L +C I+ S+ L FG +G FQL DD+LD +
Sbjct: 182 LFEASCRLAGIVTGQSKEAITNLGRFGAEVGSAFQLIDDVLDYAGESA 229
>gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
Length = 381
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + + Y + GG K+IR +
Sbjct: 59 MNLEQITELTAQDMAAVNATILEQLNSEVTLINQLGY--------YIISGGGKRIRPMIA 110
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 111 VLAARALQYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 168
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M ++ D I E
Sbjct: 169 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLM------NVHDPDITEESYM 222
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI++ A++ +++ L+ +G LG FQL DDLLD D L
Sbjct: 223 RVIYSKTARLFEAAAQSSAILSGATEAQEQGLQDYGRYLGTAFQLIDDLLDYSADGVTLG 282
Query: 236 K 236
K
Sbjct: 283 K 283
>gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
Length = 336
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DQALEADVQAGLTAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGKRFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++D A++ G
Sbjct: 65 SAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASANARWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A I++ + +T I + QD +
Sbjct: 123 DFLFSRASHILADLGPEAVRVQAEAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGTDETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 330
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 16/233 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ + ++++T + L + + + GGK+IR +
Sbjct: 8 MDIKAIQALIEPDMQKVNTEILAQLNSDVALINQLGFYIIQG-------GGKRIRPMIAL 60
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 61 LAARALNYEGEKMPVCAAFIEFIHTASLLHDDV--VDESDMRRGRATANAAFGNAASVLV 118
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++ + I S L Q M ++ ++
Sbjct: 119 GDFIYTRAFQLMAKLNSLKMLTIMSDATNVLAEGEVQQLMNVNDPETTEENYMK------ 172
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L + ++ AIMA+A + + L+ +G LG FQL DD+LD
Sbjct: 173 VIYRKTARLFEVSTQAAAIMANADEKIESALQQYGRYLGTAFQLVDDVLDYSA 225
>gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
Length = 415
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
L E + + + LD L S + Q+ + +A + GGK++R +V +
Sbjct: 92 SLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKRMRPAIVFLVSRATMQ 151
Query: 66 ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N HL R+ E IH SLIHDD+ +D +RRGK TVH Y A++AG+
Sbjct: 152 LARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKETVHQLYGTRIAVLAGD 209
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + +++ + SQ++ Q + D I
Sbjct: 210 FMFAQSSWYLANLDNLEVIKLISQVIKDFASGEIQQA------SSLFDSDITLDNYLDKS 263
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---------- 231
KT +L+ + S AI + A + +++ +G+ LG+ FQ+ DD+LD
Sbjct: 264 YYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILDFTQSTAQLGKPA 323
Query: 232 -EDLPK 236
DL K
Sbjct: 324 GSDLAK 329
>gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470]
gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470]
Length = 287
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 125/227 (55%), Gaps = 12/227 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
+D L+ LL+ + +D L ++++Y+L GGK+IR L + V+ +
Sbjct: 8 VDDALECLLMPSDPA-----HDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYIN 62
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V A+EC+H YSLIHDDLP MDN RRGK H +Y A +AG+GLLTYAFE+++
Sbjct: 63 VACALECVHTYSLIHDDLPGMDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLACE 122
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFA 192
+ + + G GM+GGQ D E + ++ + KTG L+C +
Sbjct: 123 NNISFFKRIALIKILTAAA-GPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICAS 181
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
+ + +A S+N+KE + +G+++G++FQ+ DDLLD +++ K
Sbjct: 182 LDMASEIAGLSKNDKEAIHTYGKHIGLLFQITDDLLDFNGVFQEMGK 228
>gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 296
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ ++ I+ IL L +Q ++ A+ Y+L GGK++R L+ E
Sbjct: 2 NFRDEKRKKTEEIEQILKAYLP-----VQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETF 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F T AAIE IH YSL+HDDLP+MD+ RRG+ T HI Y E I+AG+
Sbjct: 57 QMFGSAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDA 116
Query: 123 --LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
+ + + + + + L G+ GM+GGQ++D+ + T+
Sbjct: 117 LLNYAFETACTAFEEAPEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILS 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I ++KTGAL+ A GAI+A A + E + + +GI FQ+ DD+LD
Sbjct: 177 FIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTSTEE 233
>gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
amyloliquefaciens FZB42]
gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42]
Length = 349
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 30 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 81
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 82 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 139
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I S+ ++ + Q D + +
Sbjct: 140 TGDYMLAGSLEMMTRLDEPKAHRILSKTIVEVCLGEIEQI------RDKYNMEQNLRTYL 193
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 194 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 253
Query: 236 K 236
K
Sbjct: 254 K 254
>gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1]
gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1]
Length = 341
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 8/226 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L + ++ + + MQ+ A GGK++R L CA L +
Sbjct: 19 SLDPIMALVAADMNAVNSVILARMQSDVPLIPELAGHLIAGGGKRMRPMLTLACAKLLDY 78
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ A +E IH +L+HDD+ +D +RRG+ T ++ + +++ G+ L + +
Sbjct: 79 AGERHHKLAATVEFIHTATLLHDDV--VDQSGLRRGRSTANMIWGNAASVLVGDFLFSRS 136
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + I S + Q + E + I KT
Sbjct: 137 FELMVEDGSLRVLRILSNASAVIAEGEVNQL------TAQRRIETSEERYLEIIAAKTAV 190
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
L AC A++A +E L +G LGI FQL DD++D D
Sbjct: 191 LFAAACRIAAVVAEREPAVEEALDQYGRYLGIAFQLVDDVIDYVSD 236
>gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
2210633]
Length = 333
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 11 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 62
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 63 ILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 120
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 121 VGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTE------ESYM 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++D D
Sbjct: 175 QVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSD 229
>gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
Length = 288
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L ++ + +ID L+D L N + Y++ GGK++R L
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEV------DNPIFSKIMSYSVMAGGKRLRPLLFLATL 55
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+
Sbjct: 56 ETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + I+ I + +G Q + + + + + ++
Sbjct: 116 ALLPLGIQWITEGSNSAALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKV-IDQME 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E++ K
Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGK 232
>gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
Length = 299
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 130/236 (55%), Gaps = 9/236 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L+ ID L+ L +H+ D LL+++RY+L GGK++R L+ + FN
Sbjct: 2 DLKSFRHSIDKDLEAAL---IAHLGQDSQDSLLASMRYSLENGGKRLRPSLLLATLASFN 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ L A+E IH YSLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ LLT
Sbjct: 59 YDYHLGLAPACAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTL 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
AFE++S + + ++ +L+ L G GM+ GQ + +++ + ++ + K
Sbjct: 119 AFEVLSQSQEETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDL--PKK 237
TGAL+ FA + A++ Q ++ L + + GI +Q+ +DL + D KK
Sbjct: 179 TGALIHFAIMAAALIMDLDQAAQDSLASYAHHFGIAYQIQNDLQEVMWNDEERGKK 234
>gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter
Crescentus Cb15 Complexed With Calcium And Isoprenyl
Diphosphate
gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter
Crescentus Cb15 Complexed With Calcium And Isoprenyl
Diphosphate
Length = 345
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++ ++ D + + + + L++A GGK++R + A L ++
Sbjct: 32 EADMAGVNRLITDRMQSDVAIIPA-LAEHLIAA------GGKRLRPLMTVAAARLAGADN 84
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L AFE
Sbjct: 85 DHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFE 142
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ M D + + I + KT L
Sbjct: 143 LMVETNSMKALEILARASRVIAEGEVLQLM------RSHDLNLSQAVYLEIIQAKTAELF 196
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E+GA+ A + E LR +G NLG+ FQLADD LD E L K
Sbjct: 197 AAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGK 246
>gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
Length = 336
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L + + +A GGK+ R LV
Sbjct: 13 DQALEADVQAGLTAVEEGLLEATKSEVPLITG-------AAQHLVRAGGKRFRPLLVMLS 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++ A++ G+
Sbjct: 66 AQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASANARWGNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + +T I + QD +
Sbjct: 124 FLFARASHILADLGPEAVRVQAEAFERLVTGQI-------LETAGPQDGRDPVDHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + L +GE LG+ FQLADD+LD D
Sbjct: 177 GGKTGSLVAVSCRFGAMMSGADDTVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
Length = 498
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 176 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 227
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 228 VLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 286 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 340
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + ++A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 341 -VIYSKTARLFEAAAQCSGLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 399
Query: 236 K 236
K
Sbjct: 400 K 400
>gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 320
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 1 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 53 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 111 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 165 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 366
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 22/234 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + N R++ L + + + + + L+ A GGK+IR L C
Sbjct: 44 DAELGPAITNNLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLTLLC 96
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + ++ +E H +L HDD+ MD+ RRG PT H + A++ G+
Sbjct: 97 AHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGD 154
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
+ A ++S + + GQ+ + + +
Sbjct: 155 LIFARASILVS----------ELGSRALGIQARTFERLCLGQLHETVGPRPDEDPIEHYL 204
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTG+L+ + + GAI A A + L +GE +G+ FQLADD++D
Sbjct: 205 SVIADKTGSLVAASGQLGAIFAEADPAFEPVLVEYGEKVGVAFQLADDVIDVTG 258
>gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 330
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + ++ + + L + + + S GGK+IR + A
Sbjct: 11 DDIQKLIHRDMQKTNETILAQLNSDVTLINQLGYYIIQS-------GGKRIRPMIAILAA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + IE IH +L+HDD+ +D +RRG PT + ++ +++ G+
Sbjct: 64 RALGFHGEQPITCATFIEFIHTATLLHDDV--VDESALRRGNPTANAEFGNAASVLVGDF 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T AF++++ + + S + Q M ++ ++ +
Sbjct: 122 IYTRAFQLMTQLDSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQ------VIY 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A AI+AHA++ ++ LR +G LG FQL DD+LD D L K
Sbjct: 176 GKTARLFEAATHCAAILAHATEAQENALREYGCYLGTAFQLVDDILDYSADAQALGK 232
>gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
Length = 415
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
L E + + + LD L S + Q+ + +A + GGK++R +V +
Sbjct: 92 SLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKRMRPAIVFLVSRATMQ 151
Query: 66 ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N HL R+ E IH SLIHDD+ +D +RRGK TVH Y A++AG+
Sbjct: 152 LARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKETVHQLYGTRIAVLAGD 209
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + +++ + SQ++ Q + D I
Sbjct: 210 FMFAQSSWYLANLDNLEVIKLISQVIKDFASGEIQQA------SSLFDSEITLDNYLDKS 263
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---------- 231
KT +L+ + S AI + A + +++ +G+ LG+ FQ+ DD+LD
Sbjct: 264 YYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDDILDFTQSTAQLGKPA 323
Query: 232 -EDLPK 236
DL K
Sbjct: 324 GSDLAK 329
>gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2]
gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2]
Length = 327
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M L ++ E+ I+ L L ++ L S GGK++R
Sbjct: 1 MKDALKQRILASVSEDLTAIEGALATNLRPNLDLVRQIAGHLLFS-------GGKRLRPL 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + L N AL V E +H +L+HDD+ +D +RRG+ T H +
Sbjct: 54 LFLLSSRLCNYGGDLALDVSTLFEYLHAATLLHDDV--VDEAEMRRGRKTAHSTWGAAQV 111
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ LL + + + N+ S + ++ Q G++ + +
Sbjct: 112 VLTGDFLLARSLCLAARTGRPEIINVISGITEEMSQGEIDQLDKKGKLNLSE------AE 165
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KT L+ AC SGAI++ A + ++ L +G +LG+ FQ+ADDLLD D
Sbjct: 166 YMAIIKGKTAVLIQGACRSGAILSRAPADREQALADYGYHLGMAFQMADDLLDYTADAA 224
>gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253]
gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPNITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella abortus str. 2308 A]
gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
[Brucella abortus str. 2308 A]
Length = 363
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 50 RADMARVNELILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLASARMFGYEG 102
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+
Sbjct: 103 DGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFK 160
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 161 MMVDVGSLDALDVLATSASIIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 214
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 215 SAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 264
>gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 321
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDLVEKELKKALSGAAAETTSDTALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 SPDADFGAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G I++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGIVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGSEKELGK 227
>gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
Length = 322
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 63 GNHHHELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLYSRAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 121 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 175 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218
>gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 293
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 126/229 (55%), Gaps = 10/229 (4%)
Query: 17 DTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+T L+ + + + +L A++Y+ GGK+IR+ V FN++
Sbjct: 4 NTSLESFNIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCH 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ AIECIH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + FEII++
Sbjct: 64 KIAFAIECIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCF 191
++ ++ + GL+GM+GGQ +D +++ + + ++ KT +
Sbjct: 124 LDINDIYKLK-KVNIVFAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRA 182
Query: 192 ACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ I++ + +E E L + +G+ FQ+ DD+LD ++L K
Sbjct: 183 SIVLPYIVSKYNNDEFEAILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231
>gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323]
gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
Length = 288
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L ++ + +ID L+D L N + Y++ GGK++R L
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEV------DNPIFSKIMSYSVMAGGKRLRPLLFLATL 55
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+
Sbjct: 56 ETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + I+ I + +G Q + + + + + ++
Sbjct: 116 ALLPLGIQWITEGSNSAALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKV-IDQME 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E++ K
Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGK 232
>gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
Length = 324
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 18/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK+IR +
Sbjct: 1 MNLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIING-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N ++ + A ++ +D +RRGK T + + +++
Sbjct: 54 LAARAIN-DYAGKQHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 113 GDFIYTRAFQMMTSLGSLKVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYMR 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI+A A+ ++++ L+ +G +G FQL DDLLD D L K
Sbjct: 167 VIYSKTARLFEAAAQSSAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSADGDTLGK 226
>gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A S+ +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 338
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ E ++ + +L + L + + AL GGK+ R + C
Sbjct: 19 DAELTARVAEGLEKSEKLLMERLSTGEDFI-------VDKVTHLALAGGKRFRPLVALLC 71
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ F + + V A+ + MD +RRG + + +++ AI+AG+
Sbjct: 72 SE-FGPHPGSDNAVKGAVITELVHLATLYHDDVMDEADMRRGVESANARWNNTVAILAGD 130
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++A ++S I ++ + G + +
Sbjct: 131 ILFSHASLMMS--------EIDTETVRHFADTFGQLVTGQMRESVGARGGDPVQHYLTVI 182
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L+ A G++ A AS + R GE +G+IFQ+ DD++D D
Sbjct: 183 REKTAVLIASAAHLGSLHAGASADVVTRCETIGEAIGMIFQIVDDIIDIFSDSE 236
>gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
FSL N1-067]
Length = 324
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+R + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 63 VPTADFEMVRDASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDVAAHKMLSNVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G I++ S+++ E+L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 335
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 20/238 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ + E+ + ++ + L + Y + GG K+IR +
Sbjct: 12 EQIQALANEDMQAVNAEILAQLNSEVLLINQLG--------HYIIAGGGKRIRPLIAVLA 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + A IE +H +L+HDD+ +D +RRG+PT + + +++ G+
Sbjct: 64 ARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTANAHFGNAASVLVGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 122 FIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VI 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A + AI+A AS+ + L+ +G LG FQL DD+LD L K
Sbjct: 176 YNKTARLFEAATQCVAIVADASEEIETALKNYGCYLGTAFQLIDDILDYSAQSESLGK 233
>gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 370
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 48 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 99
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 100 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 157
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 158 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 212
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 213 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 271
Query: 236 K 236
K
Sbjct: 272 K 272
>gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155]
gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185]
gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195]
gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155]
gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185]
gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195]
gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183]
gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175]
gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678]
Length = 331
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++A A+ ++ L +G+ LG FQL DDLLD D L K
Sbjct: 174 VIYCKTAKLFEAATLLAGVLAGATPEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGK 233
>gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
fusiformis ZC1]
gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
fusiformis ZC1]
Length = 324
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S L+ + + I+ L+ + ++ + +++ GGK+IR V A
Sbjct: 9 LYSDLKSDIEIIEQELEKAVDSSSYLIND-------ASLHLLQAGGKRIRPIFVLLGAKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ +
Sbjct: 62 GDYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKSQWNNRVAMYTGDFIF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E I+ + L I ++ M+ + + +Q ++ ++ K K
Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRR------IKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K
Sbjct: 174 TALLISSSCELGAVAAGVDTKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228
>gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
ATCC BAA-430]
gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
ATCC BAA-430]
Length = 287
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + + L +++ + H + + L GGK+ R L+ + + V ++
Sbjct: 2 KTLDLVFKEFEVYLKESSPKIPNFHPNYENALWEIVLNGGKRFRPKLLLSIVASYKVENV 61
Query: 71 T-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A A+E +H YSLIHDDLP+MDN RRG T+H +YDE AI+AG+GL T AF
Sbjct: 62 KLAFAPALALEILHTYSLIHDDLPAMDNAPFRRGCVTLHKKYDEALAILAGDGLNTQAFY 121
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+I++ K + K I+ LS I + + E + Q+ +I KT L+
Sbjct: 122 LIATSKLKPKIKIKLIESLSYNGGIYGMVLGQALDCHFEGEKLPLEQLRVIHLNKTAKLI 181
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ E GA++A + + L G +LG+ FQ+ DD++D
Sbjct: 182 AASFEMGAMIAECDKKTRRSLYQLGLDLGLFFQIRDDVID 221
>gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
Length = 356
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 43 KADMARVNEMILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLAAARMFGYEG 95
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+
Sbjct: 96 DGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFK 153
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 154 MMVDVGSLDALDVLATSASVIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 207
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ LR +G NLG+ FQL DD LD DL K
Sbjct: 208 SAAGEVGPIIAGARPADRVALRDYGLNLGLAFQLVDDALDYGGSAADLGK 257
>gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + ++ + L +A + GGK++R +V + N R
Sbjct: 11 VEADLY-LLSENLKNLIGASHPILYAAAEHLFGAGGKRLRPAIVLLVSRATITNSKITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RR PTV+ ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVIDESDVRRTVPTVNSLFNNRIAVLAGDFLFGQSAWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ + QG+ + + KT +LM +
Sbjct: 130 LDNLEVVKLLSEVIKDMAEGEIQQGLSRFDTTTTIEGY------LAKTYNKTASLMANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ ++ S E L +G NLG+ FQ+ DD+LD L K
Sbjct: 184 KAAGCLSGVSDQVAENLYHYGRNLGLAFQIVDDILDFTASTDVLGK 229
>gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 334
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ L ++Q+N ++++ +L + + + L A + L GGK+ R+ LV
Sbjct: 15 VDDALAREVQDNLEKVEDLLRESVAS--------SDPLLTEAASHLLAAGGKRFRATLVL 66
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A +E H +L HDD+ MD +RRG+P+ + ++ AI+
Sbjct: 67 LAAHFGDPSVPDLIPAAAVVELTHVATLYHDDV--MDEAELRRGEPSANQRWGNSVAILT 124
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A E+++ T+ + + I + Q+
Sbjct: 125 GDYVFARASEMLADLGTEAVRLQATTFGRLVQGQI-------LETSGPQEGTDPLDHYLR 177
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT +L+ + E G + + + LG+ FQLADDLLD D K
Sbjct: 178 VISDKTASLIASSAEFGGMFGKVDPETIGTVTRACDALGMAFQLADDLLDVASESTDSGK 237
>gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
Length = 338
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++ ++ D + + + + L++A GGK++R + A L ++
Sbjct: 25 EADMAGVNRLITDRMQSDVAIIPA-LAEHLIAA------GGKRLRPLMTVAAARLAGADN 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L AFE
Sbjct: 78 DHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFE 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ M D + + I + KT L
Sbjct: 136 LMVETNSMKALEILARASRVIAEGEVLQLM------RSHDLNLSQAVYLEIIQAKTAELF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E+GA+ A + E LR +G NLG+ FQLADD LD E L K
Sbjct: 190 AAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGK 239
>gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + + L + Y + GG K+IR + A +
Sbjct: 13 DMAAVNTTILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALHYQGT 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ + S+ + LQ M ++ ++ + KT L
Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A+AS+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLANASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 1_1_43]
gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 1_1_43]
Length = 340
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 18 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 69
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 70 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 127
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 128 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 182
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 183 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 241
Query: 236 K 236
K
Sbjct: 242 K 242
>gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS]
gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS]
Length = 337
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 18/232 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ + + + ++ + ++ ++ L + + + Y + GGK++R L+
Sbjct: 2 MDFAAINTLINQDMRAVNVLIQKRLYSEVALVNQIGD--------YIVNSGGKRLRPMLL 53
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A F + + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LLSARAFAYQGTHHIDLAAIVEFIHTATLLHDDV--VDASLLRRGQETANNIWGNEASVL 111
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AF+++ I S+ + LQ + + +
Sbjct: 112 VGDFLYSRAFQMMVDINNMRVMKILSEATNVMAEGEVLQLLNCYEPDTTEM------DYL 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ KT L A + GA+++ ++ + +G +LGI FQL DD LD
Sbjct: 166 RVICAKTAKLFEAAAQLGAVISEQPSEYEKAMAMYGMHLGIAFQLIDDALDY 217
>gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 332
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L++ ++ + +Q L S GGK++R V + N
Sbjct: 19 INNEIKKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNN 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 72 KPSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S + S+ ++ + Q ++ KT L
Sbjct: 132 KHLSEISDTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQLSTQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233
>gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ ++ + L + + Y + GG K++R L
Sbjct: 1 MDFKAIQALTADDMAIVNETILAQLNSDVALINQLGF--------YIVSGGGKRLRPVLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + ++ +++
Sbjct: 53 ILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAEFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S + ++ S+ + + LQ M +
Sbjct: 111 VGDFIYTRSFQMMTSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ +ASQ + L+ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis SK135]
gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis SK135]
gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU144]
gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU045]
gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU028]
Length = 319
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L++ ++ + +Q L S GGK++R V + N
Sbjct: 6 INNEIKKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 59 KPSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S + S+ ++ + Q ++ KT L
Sbjct: 119 KHLSEISDTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 220
>gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus
epidermidis ATCC 12228]
gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus
epidermidis ATCC 12228]
Length = 339
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L++ ++ + +Q L S GGK++R V + N
Sbjct: 26 INNEIKKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNN 78
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 79 KPSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 138
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S + S+ ++ + Q ++ KT L
Sbjct: 139 KHLSEISDTRVHSTISKSIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALL 192
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K
Sbjct: 193 IQLSTQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 240
>gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
18228]
gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
18228]
Length = 324
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 17/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ ++L + I+ L + S +++ + L + Y GK +R LV
Sbjct: 1 MD---KTEL--IKRPIEKELGEFRELFESSLESSNP-LLGEVLSYIRKRNGKMMRPILVM 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LF + + L V ++E +H SL+HDD+ +D RRG+ +V+ Y+ +++
Sbjct: 55 LMAKLFGHINSSTLHVALSLELLHTASLVHDDV--VDESDERRGQSSVNAVYNNKISVLV 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L + + + ++L +L+ +Q +I + E F
Sbjct: 113 GDYMLATSLWHAAHTGKVELVELVARLGQALSEGEIIQL------ANISNRDFSEDIYFD 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
+ + KT AL + ESGA+ A AS+ E R FGE +GI FQ+ DD+ D E +L K
Sbjct: 167 VIRKKTAALFTASAESGALSAGASEEEVSRAADFGEMIGIAFQIKDDIFDYYESPELGK 225
>gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. 168]
gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
BSn5]
gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
subsp. natto BEST195]
gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
BSn5]
Length = 320
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 1 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 53 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I SQ ++ + Q D + +
Sbjct: 111 TGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQI------KDKYNMEQNLRTYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 165 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLM------NVNDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A AS+ ++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLLDYSADGERLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82]
gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG
857C]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNVHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262]
gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262]
Length = 321
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 10 MQKDIDLVEKELKRALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPDA 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A++ + + +D+ +RRG+ T+ ++ A+ G+ L +
Sbjct: 64 DFEAVKNAGVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ K + S + + L+ Q D + K KT L
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 177 IAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 323
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GGK+IR +V + + R
Sbjct: 11 VEADL-RLLADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH + AI+AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESDVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIMDLATGEIQQGLNRFDAGISI------ETYLQKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
++ +++ S+ E L +G + GI FQ+ DD+LD D L K
Sbjct: 184 KAAGLLSEVSRETVEHLYSYGRHFGIAFQIVDDILDFTSTTDTLGK 229
>gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
Length = 288
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L ++ + +ID L+D L N + Y++ GGK++R L
Sbjct: 2 NLKDFQKKYTPQIDKFLEDHLASEV------DNPIFSKIMSYSVMAGGKRLRPLLFLATL 55
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+
Sbjct: 56 ETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + I+ I + G Q + + + + + ++
Sbjct: 116 ALLPLGIQWITEGSNSAALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKENAKV-IDQME 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+KTG L+ + + A+ A AS +E +RL F + G +Q+ DDL+D E++ K
Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGK 232
>gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
Length = 299
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
N L + + ++ +D L Q + L ++ Y++ GGK+IR ++
Sbjct: 3 NSELDNFQAKFLPLLNERMDVYLQQLDTR------KTLHDSMSYSVDAGGKRIRPMIIML 56
Query: 61 CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
F L V A++E +H YSLIHDDLP+MDN +RRGK T H+ + E AI+A
Sbjct: 57 VCDSFKKKIDQDVLDVCASLEFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILA 116
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GLLT AFE + K L+ ++ + + Q+
Sbjct: 117 GDGLLTTAFECLGQTSISAKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQLRN 176
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTGAL+ +A ESG I+A S L+ G G+ FQ+ DD++D
Sbjct: 177 VHAQKTGALLRYAFESGGILAGVSDRALGELKELGNCFGLAFQIYDDIMDVVS 229
>gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 333
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ +++ + L S + + GGK++R L
Sbjct: 11 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 64 LSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + LQ M +
Sbjct: 122 GDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTE------ESYMQ 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A + L+ +G+ LG FQL DD++D D
Sbjct: 176 VIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSD 229
>gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7]
gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7]
Length = 317
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 15/227 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E +ID+ L + + + L SA ++ LL GGK++R +L L +
Sbjct: 5 REILSKIDSELKKYMEK---------DTNLYSASKHLLLAGGKRVRPYLSIITYLLKKDD 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF
Sbjct: 56 INEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S+ K + +++ + ++ ++ F + F + KTGAL
Sbjct: 114 EALSNIGDSKKAHEVLKVLSKACVEV---CEGQTDDMEFEERFPTLDEYFDMISKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GAIMA + E+ L + + +G+ FQ+ DD+LD D
Sbjct: 171 IVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDDVLDLIGDQK 217
>gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1]
gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1]
Length = 290
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT-AL 73
I+ +D+ + + + + L+ AI Y++ GG K+IR ++ E F V +
Sbjct: 4 IEK-IDEAIHRHYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHY 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
V AA+E IH SLIHDDLP+MDN RRG+ T H ++DE TA++AG+ L F+++
Sbjct: 63 DVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVK 122
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ +R +LS++ + +++ + + +I KTG L+ +
Sbjct: 123 AGFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPF 182
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ I+A S+ K +L G +G FQ+ DD+LD +L K
Sbjct: 183 XAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228
>gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H299]
gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H299]
Length = 323
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + T+++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNATSVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Grimontia
hollisae CIP 101886]
Length = 323
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ ++D + L + + Y + GG K++R L
Sbjct: 1 MDFNTIQALTADDMAKVDQKILAQLNSDVALINQLGF--------YIVSGGGKRLRPMLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLSGRALGYQGEGHITAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAMFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ ++ ++ S+ + LQ M +
Sbjct: 111 VGDYIYTRSFQMMTELRSLRILDLMSKATNVIAEGEVLQLMNCNDPNTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDL-P 235
+ KT L A + GAI+A AS+ + ++ +G LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFEAATQIGAILADASEEIETAMQDYGRYLGTAFQLIDDVMDYTSQGDEMG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 355
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S + + ++ + +L L Q AS + + AL GGK++R
Sbjct: 36 DDELNSFVADGMEKCEKLLIRELDQGASFVTDKVK-------HLALAGGKRVRPMFALLA 88
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A + + + ++ MD RRG + + +++ AI+AG+
Sbjct: 89 SRYGERPGCDDVIKAAIVVEMTHLATLY-HDDVMDEAEKRRGADSANFRWNNSVAILAGD 147
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +++ ++ + + + G + + +
Sbjct: 148 FILSAASRLMA--------SLGVKTVKHFSEAFGDLVTGQMRETIGATSGDEIEHYLNVI 199
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ A GA+ A ++ L FGE+LG++FQ+ DD++D D
Sbjct: 200 HEKTAVLIRSAGFLGAMHAGTPAPIQQALATFGEHLGMVFQIVDDMIDIFSDTS 253
>gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863]
gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v]
Length = 323
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A S E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
NA1000]
Length = 336
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++ ++ D + + + + L++A GGK++R + A L ++
Sbjct: 23 EADMAGVNRLITDRMQSDVAIIPA-LAEHLIAA------GGKRLRPLMTVAAARLAGADN 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L AFE
Sbjct: 76 DHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFE 133
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ M D + + I + KT L
Sbjct: 134 LMVETNSMKALEILARASRVIAEGEVLQLM------RSHDLNLSQAVYLEIIQAKTAELF 187
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E+GA+ A + E LR +G NLG+ FQLADD LD E L K
Sbjct: 188 AAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGK 237
>gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101]
gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101]
Length = 301
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ ++L + + L DL H + ++ A+RYA+ GGK +R+FLV E
Sbjct: 8 MQAELT--RRPFEEALGKAADLATGQVLHGLGGVDGQIAEAMRYAVTGGKGLRAFLVIES 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L V A AIE +H YSL+HDD+P MDN +RRG+PTVH+++DEVTA++AG+
Sbjct: 66 ARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDNDDLRRGQPTVHVKWDEVTAVLAGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLDIQDEFIDETQVFM 179
L AFE+ + + L+ + G + + Q+
Sbjct: 126 ALQALAFELAAQTGCSDAGRVALVAGLAHASGVRGMVGGQALDIAAESASVPLTLDQITT 185
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+Q KTGAL+ +A +G +MA L+ + +LG+ FQ+ADD+LD E D
Sbjct: 186 LQAGKTGALIEWAATAGPVMARDDP---RPLQRYARDLGLAFQIADDILDIEGDAE 238
>gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9916]
gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Synechococcus sp. RS9916]
Length = 323
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGKKIR +V + +
Sbjct: 2 TTVTELLQPVELDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKKIRPGIVLLVSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 PEGELTARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTGQSF------ETYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + + +++ + + + L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLIANSARAAGVLSEQTPDRLDSLYRFGRQLGLAFQVVDDILDFTGSDQQLGK 229
>gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum MolK2]
gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum MolK2]
Length = 352
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 40 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 92
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 93 GNHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLYSRAF 150
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 151 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 204
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 205 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248
>gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 324
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ E + + + L+ + M ++ L Y L GK+IR LV A L
Sbjct: 3 INEVIRPVKSELELFRTKFKDAMASEV-GLLNKVASYILKQKGKQIRPALVLLSAKLVGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ R A +E +H +L+HDD+ +D +RRG P V+ + A++ G+ LL
Sbjct: 62 VNEGTYRAAALVELLHTATLVHDDV--VDTADMRRGLPAVNALWKNKVAVLMGDYLLARG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ L NI S + ++ LQ + IDE F I KT +
Sbjct: 120 LLLALQNGDTLFLNIVSDAVRRMSEGELLQIE------KTRHLDIDEETYFKIISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ ACE GA A + ++ LR GE LG+ FQ+ DD+LD + D
Sbjct: 174 LISTACELGAASASTDEKVRQSLRDCGEALGLAFQIRDDILDYQGDTK 221
>gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 321
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+QE+ + + L+ ++ + + + GGK++R L A +
Sbjct: 5 IQEDLEAFEPRLEKAIVSETALITDIG-------MHLVSSGGKRLRPALFLLAAR-GGAS 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + A+ ++ +D RRG T + ++ AI++G+ + AF
Sbjct: 57 FDRARAMPVAVALELIHTASLVHDDVIDEADTRRGAETTNAKWGNQVAILSGDYIFARAF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ + L Q + E + + KT
Sbjct: 117 KLVAEEGYDSS-----VYVKLAHLVCTLSEGEILQDHTVYQIPTSEHAYYERIRKKTADF 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ CE G + S + ++ +G +G+ FQ+ DDLLD ED+ K
Sbjct: 172 LEICCELGGFIGGMSPADTAQMAEYGHAIGMAFQITDDLLDFRRSSEDIGK 222
>gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
Length = 347
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 30/254 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + E +R++ +++ + +RL A RY L GGK++R ++ A
Sbjct: 8 SVTEAVAERRERVNRAIEE-------ELPIARPERLYEASRYLLDAGGKRLRPAVLLLTA 60
Query: 63 SLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
+ + + LR +IE I ++LI MD+ +RRG P+
Sbjct: 61 EALCDVAPLSTDYREFPTLDGDTVDVLRAAVSIETIQSFTLI--HDDIMDDDDLRRGVPS 118
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
VH +YD TAI+AG+ L + AFEI+ ++++ L+ T +G +
Sbjct: 119 VHREYDLETAILAGDTLYSKAFEIMLESGAHPGRSLKALRTLASTCTRICEGQSLDVEFE 178
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+++ + ++ + ++KT L A A + A E L +G ++G FQ+ DD
Sbjct: 179 RREDVSE-SEYLEMIELKTAVLYGSATSVPADLLGADDRTVEALYRYGIDIGKAFQIQDD 237
Query: 227 LLDCE--ED-LPKK 237
+LD D L K+
Sbjct: 238 VLDLTVPSDVLGKQ 251
>gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 356
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + R++ ++ + N + S GGK++R + A +F
Sbjct: 43 KADMARVNEMILSRAGSDVEMIPEVANHLISS-------GGKRLRPMMTLAAARMFGYEG 95
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+R+ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+
Sbjct: 96 DGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFK 153
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ E + + K KT AL
Sbjct: 154 MMVDVGSLDALDVLATSASVIAEGEVMQL------AAAKNMETTEDEYLAVIKAKTAALF 207
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++++ LR +G NLG+ FQL DD LD DL K
Sbjct: 208 SAAGEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDALDYGGSAADLGK 257
>gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L S + Y + GG K+IR +
Sbjct: 1 MNLEQINELTAQDMADVNATILEQLNSEVSLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVNYTGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLGSLRVLALMSEAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI+A A +++ L+ +G +G FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSAILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
epidermidis FRI909]
Length = 319
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L++ ++ + +Q L S GGK++R V + N
Sbjct: 6 INNEIKKVEKRLEEAIISSDQTLQDASFHLLSS-------GGKRVRPAFVILSGQFGSNN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 59 KTSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S S+ ++ + Q ++ KT L
Sbjct: 119 KHLSEISDTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 220
>gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638]
gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ ++ + L + Y + GG K+IR +
Sbjct: 1 MNLDKINELTAQDMAGVNAVILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILAARAVGYQGDAHVNIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A ++ ++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTEAQERGLQDYGRYLGTAFQLIDDLLDYSADGETLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 7/221 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALR 74
++ L+ L + + +H ++A GGK IR +V A + +T
Sbjct: 11 VEADLERLRQNLSRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPQH 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A ++ +D +RRG TV+ +D A++AG+ L A +++
Sbjct: 71 WRLAEITEMIHTASLVHDDVIDTADVRRGIDTVNTLFDNRVAVLAGDYLFGQAAWYLANL 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S++++ L Q + + KT +L+ + +
Sbjct: 131 DNLEVVKLLSKVIMDLPEGEVRQSLTRFDPDVSL------EEYLAKSFYKTASLISGSSK 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +++ S +RL FG +LGI FQ+ DDLLD
Sbjct: 185 AAGLLSGVSPEVADRLFDFGRDLGIAFQIVDDLLDFTASAE 225
>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
Length = 289
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 7/227 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN- 68
+ K+I + Q + + L+ AI Y++ GG K++R + E F V
Sbjct: 2 DKVKKIGQAIHRYYEQ-----KDIVSPDLIEAILYSVDGGGKRVRPLIFLELLEGFGVAL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MDN RRG+ T H +++E TAI+AG+ L +
Sbjct: 57 TDAHYDVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFNEATAILAGDSLFLDPY 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++++ + + + L+ ++ ++ + +++ +I KTG L
Sbjct: 117 DLVANAELSAEVKVALIAELAHASGTYGMVGGQMLDMEGEERKLSLSELQLIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ F + I+A + + LR G +G+ FQ+ DD+LD
Sbjct: 177 LTFPVVAAGIVAGLAGEDINNLRKAGSLIGLAFQVRDDILDVTASFE 223
>gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
Length = 339
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 17/231 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC- 61
L KL E +R++ L + +TA+ T+ L +A GGK++R LV
Sbjct: 9 DALEEKLTEALERVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61
Query: 62 --ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + A + + MD+ +RRG H++++ A++A
Sbjct: 62 QLGKAGGDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMA 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A +I S + ++ L + G D D +
Sbjct: 122 GDLIFARAS-LIVSDFGRKLMKHHARTFQRLCLGQMHDILGPGATDDPIDFY------LH 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD
Sbjct: 175 VLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225
>gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALGYQGT 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + S + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S AI++ A+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAILSDATPEQELTLQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
25986]
gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
25986]
Length = 341
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 4/234 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59
++ S L ++ +I+ L A+ L + + + GK+ R +
Sbjct: 5 VSSPFTSFLAQHFDQINDYLATFFDGQAT--SADIERYLYAPLSTFTANAGKRHRPLICM 62
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A+ + +A AAIE +LIHDD+ + +
Sbjct: 63 LAATAVGGSFESARSAAAAIEHFQSGALIHDDIADNGQLRRGKPCMHLTEGTGLAINCGD 122
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ + + + L + I
Sbjct: 123 LALTMVTKTVLDDPTLESDVKLRVLHELTEMIVRTIEGQALDLGWVRDGRFDISVDDYLD 182
Query: 180 IQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +GAI+ S + E LR FG + G+ FQ+ DDLL+
Sbjct: 183 MATHKTAFYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQIQDDLLNLVG 236
>gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanococcus maripaludis S2]
gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanococcus maripaludis S2]
Length = 317
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 15/227 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E +ID+ L + + + +L A ++ LL GGK++R +L L
Sbjct: 5 REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDE 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF
Sbjct: 56 LTEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S+ + K + +++ + + ++ ++ F + + KTGAL
Sbjct: 114 EALSNIEDSNKAHEVLKVLSKACVEV---CEGQTEDMEFEERFPTLDEYLEMISKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA+MA + E+E L + + +G+ FQ+ DD+LD D
Sbjct: 171 IVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217
>gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Nocardioidaceae bacterium Broad-1]
gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Nocardioidaceae bacterium Broad-1]
Length = 337
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 15/236 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +L+ ++ L +++S T+ LL A GGK+ R LV
Sbjct: 19 DPELEQRLRARLAIVEEKLAGY-ARSSSPFVTEAASHLLEA------GGKRFRPLLVLLA 71
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + L + AA + MD +RRG+ T + ++D AI+ G+
Sbjct: 72 AE-CGPDTLADEVITAACIVELTHQASLYHDDVMDEALLRRGEDTANARFDNHVAILTGD 130
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + + + + + I + + + +
Sbjct: 131 FLFARSSSLTAELGPDAVRIQAATFAKLVEGQI-------LEGVAPAEGVDPVDHHLEVL 183
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KTG L+ + GA+ A A + ++ L +G+ +G+ FQL+DD+LD D K
Sbjct: 184 AGKTGVLIATSALYGALFAGADKEIQDALVAYGDIVGVAFQLSDDILDIASDESGK 239
>gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 346
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Query: 15 RIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
R++ +LD + + + + + A R+ + GGK+ R LV A + +
Sbjct: 27 RVEASVLGVLDRVETNLRASVASADP-LVTEASRHLVEAGGKRFRPLLVALGAQFGDPDT 85
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +E H +L HDD+ MD +RRG P+ + ++ AI+ G+ L A +
Sbjct: 86 DQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAAD 143
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I++ ++++ L H + + + + KTG+L+
Sbjct: 144 -IAADLGPEAVRLQARTFARLVHGQIAETV-------GPRDTDPVAHYLHVIAEKTGSLI 195
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ G + A+ E L +GE +G+ FQL+DDLLD +
Sbjct: 196 ATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLSDDLLDIASES 240
>gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum IPO1609]
gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
protein [Ralstonia solanacearum IPO1609]
Length = 338
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 40 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 92
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 93 GNHHYELAAVVEFIHTAALLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLYSRAF 150
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 151 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 204
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 205 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248
>gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073]
gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
Length = 323
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + + L + Y + GG K+IR + A +
Sbjct: 13 DMAAVNTTILEQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALHYQGS 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S ++ + S+ + LQ M ++ ++ + KT L
Sbjct: 123 MTSLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A AS+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
W23144]
gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
W23144]
Length = 332
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L++ ++ + +Q L S GGK++R V + N
Sbjct: 19 INNEIKKVEKRLEEAIISSDQTLQDASFHLLSS-------GGKRVRPAFVILSGQFGSNN 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 72 KPSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S S+ ++ + Q ++ KT L
Sbjct: 132 KYLSEISDTRVHTTISKSIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + GAI ++AS + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQLSTQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233
>gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536]
gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88]
gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a]
gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA206]
gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536]
gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88]
gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a]
gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034]
gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1]
gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1]
gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1]
gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972]
gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146]
gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3]
gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1]
gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3]
gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252]
gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263]
gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2]
gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1]
gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA206]
Length = 323
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 323
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ +++ + L S + + GGK++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + LQ M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTE------ESYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A + L+ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosaeta concilii GP-6]
gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosaeta concilii GP-6]
Length = 319
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ +L+ + + ++ LL H L A R+ + GGK++R ++ A
Sbjct: 1 MEEELERRAALVTATIEKLL-------PVMHPRGLYEASRHLVDSGGKRLRPSMLLLAAE 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L +IE +H ++LIHDD+ MDN +RRG+P VH + + AI+AG+ L
Sbjct: 54 AAGGEALALAPAAVSIELVHNFTLIHDDI--MDNADVRRGRPAVHKIWGQSGAILAGDTL 111
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ + + + MLS T +G + +D + + + +
Sbjct: 112 YSKAFQVLGMTAASPERILGAMNMLSRTCTAICEGQWLDMEFESKDRVTE-NEYMEMIEK 170
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------E 232
KTG L + G ++A AS L FG G+ FQL DD++D
Sbjct: 171 KTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQDDVIDLLTPEEVSGKRQGG 230
Query: 233 DL--PKK 237
DL KK
Sbjct: 231 DLIEGKK 237
>gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
Length = 297
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+LD+ +L++ +L ++ Y+L GGK+IR L+ NV+ L
Sbjct: 13 VLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAV 72
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH YSLIHDDLP+MDN RRGK T H +DE TAI+AG+ LLT +F +I++
Sbjct: 73 ALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKI 132
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ L+ L+ G GM+ GQ +D + + I+ + I K KTG L+ +A +
Sbjct: 133 QNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFA 192
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
G +A AS L F GI +Q+ +DL +
Sbjct: 193 GGQIAQASSEVATLLDDFAWAYGIAYQIQNDLQEV 227
>gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 289
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 7/224 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ I+ + Q + L+ AI Y++ GGK+IR + E F +
Sbjct: 2 DKLNEINQAIRRYYAQ-----SDVVSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 57 TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ +R LS + ++ ++ +++ MI KTG L
Sbjct: 117 GLVANAALSADTKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQMIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ F + I+A+ + ++ + LR G +G+ FQ+ DD+LD
Sbjct: 177 LTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTA 220
>gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 280
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+++ + ++ A++Y+L GGK+IR ++ + + V AA
Sbjct: 1 MNNFETYLQHICDALQDSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAA 60
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MD+ +RRGKPT H+Q+DE TAI+AG+ LLT AF + +
Sbjct: 61 IEMIHTYSLIHDDLPAMDDDTLRRGKPTCHVQFDEATAILAGDALLTQAFLLGAMASEDA 120
Query: 139 KDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
N LS G+ + E + ++ I KTG L+ A
Sbjct: 121 MVNCAIVKALSRYAGADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAA 180
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ H + + G +LG+ FQ+ DD+LD +L K
Sbjct: 181 YLTHH-EEDIPAWEQIGSDLGLSFQIQDDILDVTSTVEELGK 221
>gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
S4-378]
Length = 321
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ I+ L L A+ + LL A GGK+IR V A L
Sbjct: 10 MQKDIDLIEKELKKALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPDA 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A++ + + +D+ +RRG+ T+ ++ A+ G+ L +
Sbjct: 64 DFEAVKNAGVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ K + S + + L+ Q D + K KT L
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 177 IAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens DSM 7]
gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens DSM 7]
gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens LL3]
Length = 320
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 1 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 53 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I S+ ++ + Q D + +
Sbjct: 111 TGDYMLAGSLEMMTRLDEPKAHRILSKTIVEVCLGEIEQI------RDKYNMEQNLRTYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 165 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
Length = 297
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN ++ ++ I+ +L+ + H +L + Y+ GGK++R ++
Sbjct: 4 MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 58
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+
Sbjct: 59 AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 118
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT AF+ +++ + L+ Q ++ + Q+
Sbjct: 119 TGDALLTIAFQWLAATGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLK 178
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ ++KTG ++ F ++ +A + F +N G+ FQ+ DD++D E +L
Sbjct: 179 KLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVELG 238
Query: 236 K 236
K
Sbjct: 239 K 239
>gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
Length = 336
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 15/225 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R + ++ + + N + GGK++R LV A +
Sbjct: 25 DLERTNQLIIQRTGSDVTTIPEVANHLIS-------AGGKRLRPMLVLATAGMCGYKGDG 77
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L+ A IE +H +L+HDD+ +D +RRGK + + T ++ G+ LL +AF+++
Sbjct: 78 HLKFAAGIEFMHTATLLHDDV--VDESNMRRGKIAARMLWGNQTCVLVGDFLLGHAFKMM 135
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
P + SQ + LQ +D E + + KT L
Sbjct: 136 VEPGMVPPLTVVSQAAAVIAEGEILQL------NAAKDTTTTEDAYMAVIRRKTAELFAA 189
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E G ++A+ + ++ R +G NLGI FQL DD LD K
Sbjct: 190 AAEVGVMLANKPKADEAAARSYGMNLGIAFQLIDDALDYGGSSAK 234
>gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
Length = 338
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 15/225 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ ++ + + N + GGK++R LV A +
Sbjct: 27 DLQRVNQLILQRTGSDVTTIPEVANHLIS-------AGGKRLRPMLVLATAGMCGYRGDG 79
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ A IE +H +L+HDD+ +D +RRGK + + T ++ G+ LL +AF+++
Sbjct: 80 HIKFAAGIEFMHTATLLHDDV--VDESDMRRGKIAARMLWGNETCVLVGDFLLGHAFKMM 137
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
P ++ SQ + LQ +D E + + KT L
Sbjct: 138 VEPGVLPCLSVVSQAAAVIAEGEILQL------NSAKDTQTTEDAYMAVIRSKTAELFAA 191
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E G +++ + ++ R +G NLGI FQL DD LD K
Sbjct: 192 AAEVGPMLSGRPKADEAACRSYGMNLGIAFQLIDDALDYGGQSAK 236
>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
Length = 348
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 74/220 (33%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECA----------SLFNVNHLTALRVGAAIEC 81
+ + L A RYA+ GGK++R LV R A+E
Sbjct: 71 SSLPEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKTGHQTDDLTKKIQMLFRAMMAVEL 130
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP MD+ +RRG+PT HI Y E A++AG+ L + AFE++ + +
Sbjct: 131 IHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSAD 190
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIM 199
L+ + + M+ GQMLDI+ E + ++ I + KTGAL+ A GAI
Sbjct: 191 DAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAIC 250
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A + L+ + +G+ FQ+ DD+LD D L K
Sbjct: 251 ADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 290
>gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 322
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L RI+ L+ L Q ++ L L GGK++R L A
Sbjct: 4 LSDFFSRELPRINATLEQELAQLNPLVKEVGEHIL-------LSGGKRLRPMLTILTARC 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ ++E +H +LIHDD+ +D+ RRG+ H+ + ++AG+ LL
Sbjct: 57 LGYQDQDIYPLACSLEFLHSATLIHDDI--LDSADTRRGQTACHLAFGLHRTVLAGDALL 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + +I + + ++ I+ D T I + K
Sbjct: 115 ALANL------IVARYDIPAMNYCVAQAIMRTATGEVEEIAQIRSPRPDRTAYLEIIQGK 168
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T L+ AC GA++A A Q + FG N+G+ FQL DD LD D L K
Sbjct: 169 TADLIRAACSCGAMLARADQERLDHADSFGFNVGMAFQLVDDALDYAADHELLGK 223
>gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
Length = 340
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 89/238 (37%), Gaps = 19/238 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
++ + ++ ++ L + + Y + GGK+IR +V E A +
Sbjct: 10 EKYGELVNKAIERYLT-------IGVDPSFRETVLYQVATGGKRIRPLMVIESALACGGS 62
Query: 69 HLTALRVGAAIECIHCYSLIHD----------DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+AL A +E IH YSLI+D ++P++ Y V I Y E
Sbjct: 63 LESALPYAAIVELIHNYSLIYDDIIDEADLRRNMPTVRRKYGDYAAILVGIWYREAIEEA 122
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ + +T + +L + + ++ L +
Sbjct: 123 VLDTRNPSEVARVV-AETIKAIDEGERLDILMEYSGRRDPYFIENRLVREITPALRDLYI 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KT AL + G A + E L FG N+G+ FQ+ DD+LD DL K
Sbjct: 182 RMISLKTAALFKTSMWLGGYSAKCGNEQLEALSNFGYNVGVAFQIIDDVLDIFGDLRK 239
>gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
Length = 320
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 32/262 (12%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M+ + L+ + D L+ LL + A+R++ GGK++R L
Sbjct: 1 MDSHTDVKHLLKAGATLTDAALERLLPA-----PDTLPHSIHRAMRHSTFAGGKRLRPIL 55
Query: 58 VTECASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
E A + + A +GAA+E IH YSLIHDDLP++DN +RRG+PT H+ +
Sbjct: 56 ALEAARMVSGGTLTPALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVF 115
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
E TAI+AG+ L T AF+ I++ + +S G+ +
Sbjct: 116 GEATAILAGDALQTLAFQTIANLHAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMI 175
Query: 172 IDETQV-------------FMIQKMKTGALMCFACESGAIMAHASQ-----NEKERLRCF 213
+ I + KTGAL+ + +G ++ Q + RLR F
Sbjct: 176 GGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTF 235
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
G+ G+ FQ+ DD+LD +D
Sbjct: 236 GQKAGLAFQIVDDVLDMTQDSA 257
>gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 321
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ A + L + Y L + GK+IR LF N A+ V A E H
Sbjct: 12 KKIAEISYPKQPKELYEPMIYLLSMKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFH 71
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++L+HDD+ +DN ++RRG+ TVH ++++ A++AG+ +L A++ I+ Q
Sbjct: 72 NFTLMHDDI--IDNAFLRRGQSTVHTKWNKTIALLAGDSMLILAYKYIAKSPLQY---RD 126
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
L L + + ML + + + + ++KT L+ SGAI+ AS
Sbjct: 127 ILLHLFSSIAAKVCEGQAYDMLLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGAS 186
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + L+ FG NLGI FQ+ DD+LD +
Sbjct: 187 GQDAKFLQDFGINLGIAFQIQDDMLDVYGNSS 218
>gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus
amyloliquefaciens TA208]
Length = 320
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGGLP-SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M + S L ++ I+ L+ + L A + L GGK+IR V
Sbjct: 1 MKFKMAYSFLNDDIDVIERELEQTVRS--------DYPLLSEAGLHLLQAGGKRIRPVFV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + V +E IH SL+HDD+ +D+ +RRGKPT+ ++D A+
Sbjct: 53 LLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMY 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L + E+++ I S+ ++ + Q D + +
Sbjct: 111 TGDYMLADSLEMMTRLDEPKAHRILSKTIVEVCLGEIEQI------RDKYNMEQNLRTYL 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
K KT L+ +C+ GAI + A + + L FG +G+ +Q+ DD+LD +L
Sbjct: 165 RRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
Length = 291
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
QE ++ L+D + Q L ++ Y++ GGK+IR FL+ V
Sbjct: 4 QEKLALVELALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLGVLEALQVA 57
Query: 69 HLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL ++ + +++ ++ I KTG
Sbjct: 118 YALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQYLSLEELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ AI+A + + +L+ G +G+ FQ+ DD+LD
Sbjct: 178 LLAYPFQAAAIIAELAPEIQAKLKTVGALIGLAFQVRDDVLDVTASFE 225
>gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
Length = 321
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 APNADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
Length = 296
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 11/225 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ KL ++ ++ L + L + LL ++ Y+L GGK++R LV A
Sbjct: 2 TVKEKLAVHAADVEKYLGECLK------GMGIPENLLESMEYSLMAGGKRLRPVLVLVWA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ V + A++E IH YSLIHDDLP+MD+ +RRGKP+ H ++DE TAI+AG+G
Sbjct: 56 QMLGVKKEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDG 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LLT AF ++ + + + M + G+ G M + + ++ ++
Sbjct: 116 LLTEAFGFMAKADAPAEYVVEAISLMAKSAGSPGMVGGQVVDMSYTGRDGVTLDELKVMH 175
Query: 182 KMKTGALMCFACESGAIM---AHASQNEKERLRCFGENLGIIFQL 223
MKTGAL+ AC+SGAI+ A AS+++ R +G +G+ FQ+
Sbjct: 176 SMKTGALILSACKSGAILAKGAGASEDDVRRAEEYGRLIGVAFQI 220
>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
Length = 291
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 8/230 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L++ R+ L L L +++RY+ GGK++R L
Sbjct: 1 MAESLEQLKDRVTAYLATHLA------NDIDQPTLAASMRYSTMAGGKRLRPTLTLATVE 54
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ +R A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+G
Sbjct: 55 ILGGQLDADVMRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF+ ++ R L L+ + ++ + + Q+ + +
Sbjct: 115 LLTLAFQWVTDNHLPAAVKSRLALELAKAAGPAGMVAGQARDIEGTGQQLSLDQLRYLHR 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGAL+ +A +G I+ + + L FG + G+ FQ+ DDL+D
Sbjct: 175 QKTGALLRYAVLAGGIITAQPEKVQRLLAQFGASYGLAFQIYDDLMDVVG 224
>gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 289
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ I+ + Q+ + + L+ AI Y++ GGK+IR + E F +
Sbjct: 2 DKLNEINQAIRRYYAQSDA-----VSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 57 TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ +R LS + ++ ++ +++ +I KTG L
Sbjct: 117 GLVANAALSADTKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F + I+A+ + ++ + LR G +G+ FQ+ DD+LD ++ K
Sbjct: 177 LTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGK 227
>gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 368
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 77/249 (30%), Gaps = 23/249 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFN 66
++ +R++ L + + + + + + + A+R + L GGK++R
Sbjct: 15 EDVRERVNRTLGEFMAERTALLSGISDQLGPVSDALRDFLLDGGKRLRPAFCYWGWRAAG 74
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE---------VTAI 117
AA + MD RRG P VH +++
Sbjct: 75 GGPDEPGIERAAAALELLQASALVHDDLMDRSDTRRGLPAVHRRFENLHRAGGWRGDREQ 134
Query: 118 IAGNGLLTYAFEIISSPKTQLKD-----------NIRSQLMLSLTHNIGLQGMLGGQMLD 166
+ + ++ + LM + +L D
Sbjct: 135 YGASAAVLLGDLLLIWCDELFQCSGLPTGAVSSAKPVFDLMRTEVMLGQYLDVLEPVAGD 194
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
D + ++ + + GA++A A + + L FG LG FQL DD
Sbjct: 195 STDADALDRARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLRDD 254
Query: 227 LLDCEEDLP 235
LL D
Sbjct: 255 LLGVFGDPA 263
>gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
J1-023]
Length = 321
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 10 MQKDIDLVEKELKKALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPNA 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A++ + + +D+ +RRG+ T+ ++ A+ G+ L +
Sbjct: 64 DFEAVKNAGVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ K + S + + L+ Q D + K KT L
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 177 IAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1]
gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1]
Length = 320
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
Length = 358
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 98/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +Q + ++ + + L + + + S GGK+IR + A
Sbjct: 39 ETIQQLIQLDMQKTNEAILAQLNSNVALINQLGYYIIQS-------GGKRIRPMIAILAA 91
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ IE IH +L+HDD+ +D +RRG PT + ++ +++ G+
Sbjct: 92 RALGYTSDEPITCATFIEFIHTATLLHDDV--VDESELRRGNPTANAEFGNAASVLVGDF 149
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T AF++++ + + S + Q M ++ ++ +
Sbjct: 150 IYTRAFQLMTQLNSLRILKVMSDATNVIAEGEVQQLMNVNDPNTTEENYMQ------VIY 203
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A AI+A A+ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 204 GKTARLFEAATHCSAILAKATAAQEKALQDYGRYLGTAFQLVDDILDYSSNAQTLGK 260
>gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti
R7A]
Length = 324
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q+ ++R++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 28 WMQDGARRVEQALARLLCAED-----DGETELMAAMRYATLHGGKRTRALLCLATGALAD 82
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 83 TPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 142
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S + I L+ + L + + ++ ++ + +MK+G
Sbjct: 143 AFLTLASLDAPGDNRIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKSG 202
Query: 187 ALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ + GA+ A A L + G+ Q+ DD+LD D
Sbjct: 203 ALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATADTA 255
>gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
Length = 323
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K+IR L
Sbjct: 1 MDFKAIQALTADDMAKVNETIHAQLNSDVSLINQLGF--------YIVSGGGKRIRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLSARALGYQGEAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A + L+ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFEAATQIGAILNEAPAEVELALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis
CGDNIH1]
gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis
CGDNIH1]
Length = 353
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 21/240 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
GL + +Q++ + + D + + A GGK++R L A
Sbjct: 27 SGLIALVQDDLTLCNQAIIDRMDSQVPLIPQL-------AAHIVAAGGKRLRPLLTLASA 79
Query: 63 SLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + + + A +E IH +L+HDD+ +D +RRG + + + +
Sbjct: 80 RLCGFDTALAGGVPRHVHLAACVEFIHTATLLHDDV--VDESRMRRGMASANAVFGNNAS 137
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L AF+++ + I S+ ++ LQ D E++
Sbjct: 138 VLVGDFLFARAFQLMVEDGSLQVLAILSKAAATIAEGEVLQL------ATQNDLETPESR 191
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KT +L AC+ GA++A E++ L +G +LGI FQL DD LD D K
Sbjct: 192 YLEVIEGKTASLFAAACQVGAVVAARPAEEEQALYDYGMSLGIAFQLTDDALDYAADQRK 251
>gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 320
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 7/221 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALR 74
++ L+ L + +H ++A GGK IR +V A + +T
Sbjct: 8 VEADLERLRQNLTRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPRH 67
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A ++ +D +RRG TV+ +D A++AG+ L A +++
Sbjct: 68 WRLAEITEMIHTASLVHDDVIDAADVRRGIDTVNTLFDNRIAVLAGDYLFGQAAWYLANL 127
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S++++ L Q + KT +LM + +
Sbjct: 128 DNLEVVKLLSKVIMDLPEGEVRQSLTRFDPDVSM------EDYLAKSFYKTASLMSGSSK 181
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +++ S+ +RL FG +LGI FQ+ DDLLD
Sbjct: 182 AAGLLSGVSEEVADRLFDFGRDLGIAFQIVDDLLDFTASAE 222
>gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2]
gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2]
Length = 320
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 20/236 (8%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ S L + I+ L++ + + L A + L GGK+IR V A
Sbjct: 6 MYSFLNSDLTVIENELEETIKAES--------PLLHQASLHLLQAGGKRIRPVFVLLAAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ V ++E IH SL+HDD+ +D+ +RRG+PT+ ++D A+ G+ +
Sbjct: 58 FGEYDIDKIKNVAVSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNKIAMYTGDYI 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A E+I++ K I S ++ L Q + K
Sbjct: 116 FARALELITNIKNPHAHKILSHTLVELCIGEIEQIKDKYNYDQNIRTYFRR------IKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +C+ G I A+ ++ ++L FG +G+ +Q+ DD+LD +L K
Sbjct: 170 KTAMLIAVSCQLGGIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFVGTEKELGK 225
>gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703]
gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703]
Length = 323
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + L ++ ++ I+ + L + + Y + GG K+IR +
Sbjct: 1 MNLEQITALSAQDMAAVNQIILEQLNSDVALINQLG--------HYIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S + + LQ M D I E
Sbjct: 111 VGDFIYTRAFQMMTSLSSLRVLAVMSDAVNVIAEGEVLQLMNC------NDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI+A A + LR +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSAILADADTTCENALRDYGRYLGTAFQLIDDLLDYNADGKTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
Length = 324
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 1 MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ L ++ + ++ ++ + + + Y + GGK++R L
Sbjct: 1 MDIDQIRALSNDDMQAVNQLIQQQVDSEVALINQLGF--------YIVNSGGKRLRPLLT 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A +++ + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 53 VLSARAMGIDNNEHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETANAIFGNQASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L T +F+++ S K I S+ + LQ M + + F
Sbjct: 111 VGDFLYTRSFQMMVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDAGTTE------ARYF 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A + A++ +++ + ++ +G++LG FQLADD+LD D
Sbjct: 165 DVIYGKTARLFEAATQLAAVLTEQNEHIERAMQEYGKHLGTAFQLADDILDYMADSE 221
>gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
W3110]
gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A]
gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638]
gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11]
gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B]
gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
11128]
gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
CB9615]
gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736]
gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H736]
gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M605]
gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M718]
gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA271]
gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H591]
gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655]
gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr.
W3110]
gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A]
gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638]
gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11]
gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
11368]
gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
11128]
gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1]
gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15]
gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017]
gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042]
gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
CB9615]
gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1]
gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1]
gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1]
gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1]
gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1]
gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1]
gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1]
gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1]
gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1]
gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1]
gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7]
gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1]
gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1]
gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1]
gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7]
gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407]
gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str.
2457T]
gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W]
gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1]
gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1]
gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431]
gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112]
gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905]
gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83]
gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327]
gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B]
gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA
5905]
gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14]
gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G]
gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68]
gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180]
gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357]
gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1]
gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11]
gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520]
gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482]
gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120]
gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007]
gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509]
gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3]
gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167]
gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86]
gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H736]
gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M605]
gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli M718]
gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA271]
gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli H591]
gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82]
gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74]
gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74]
gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9]
gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88]
gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70]
gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671]
gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71]
gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71]
gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6]
gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272]
gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218]
gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304]
gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227]
Length = 323
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
Length = 338
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L AS+F
Sbjct: 25 RADMERVNQLILSRAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASMFGYEG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF
Sbjct: 78 DHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A + + L+ +G NLG+ FQL DD+LD DL K
Sbjct: 190 AAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGK 239
>gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Rothia dentocariosa M567]
gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Rothia dentocariosa M567]
Length = 353
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
RI+ L + + T ++A L GGK++R L A++ +
Sbjct: 42 LARIEERLAEAISYTDKLAD-------VAARHLLLAGGKRVRPLLTLLAAAVDGQINDDV 94
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +E H +L HDD+ MD+ RRG T + AI+ G+ + + A ++S
Sbjct: 95 IEAAVVVELTHLATLYHDDV--MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVS 152
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ ++ Q +G G + + + KTG+L+ A
Sbjct: 153 DLGTRP---MKIQAQTFERLVLGQLYETTGVRENQDILDHY----ISVIEGKTGSLIAAA 205
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E G+++A AS+ + L +GE +G+ FQLADD++D D K
Sbjct: 206 GEYGSLLAGASEEVIQMLATYGELVGVAFQLADDVIDIVSDGASSGK 252
>gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
Length = 326
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I++ L+D + S + + + L + + GGK++R L+ A F
Sbjct: 4 LSIIKRPIESELNDFIDLFNSSLDHE-DGLLTQVLHHIKQRGGKRMRPILILLIAKSFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
T +E +H SLIHDD+ +D RRG+ +V+ Y+ A++ G+ +L+ A
Sbjct: 63 VSPTTQHAAVGLELLHTASLIHDDV--VDESNERRGQASVNASYNNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + ++L +L+ LQ +I+ E I E I KT
Sbjct: 121 LQQVGYTNSNSIVKYLAELGQTLSDGEILQL------SNIKREEITEAAYLEIIARKTAI 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L GA A S+ + R FG+N+G+IFQ+ DD+ D + K+
Sbjct: 175 LFEICAAIGAESAGVSEEDVALARAFGKNIGMIFQIRDDIFDYF-ESEKE 223
>gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
Length = 322
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L I+ L+D + +Q L L GGK++R L A
Sbjct: 2 SDFADILSREVPAINEYLEDAAATLSPLVQPVVRHVL-------LAGGKRLRPLLTVLVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + + ++E +H +L+HDD+ +D +RRG+ + H+++ I+AG+
Sbjct: 55 RAFGHDKDDVYPLACSLEFLHSATLLHDDI--VDGAPLRRGRESAHVRFGATHTILAGDV 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A I++ I S+ +L L+ I
Sbjct: 113 LLALANRIVAEYDVPELTRILSEALLQTATGEILEIAHLRDTDLPL------ETYLSIIT 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ AC GAI+A A + G N GI FQL DD LD
Sbjct: 167 GKTAYLLQAACHCGAILAGADARLCQAAMSLGVNCGIAFQLVDDALDYTS 216
>gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA143]
gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Escherichia
coli TA143]
Length = 323
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
Length = 322
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
K ++ ++ + L + + Y + GGK++R L A
Sbjct: 14 MKAVNALIVERLKSDVALINQLG--------HYIIQSGGKRLRPQLAVLAARAAGYQGED 65
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L++ A IE IH +L+HDD+ +D +RRG+ T + + A++ G+ L + +FE++
Sbjct: 66 HLQIAAIIEFIHTATLLHDDV--VDASELRRGRETANAVFGNEAAVLVGDFLYSRSFEMM 123
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ +I S+ + +Q + D E + + KT L
Sbjct: 124 VELDSMRIMSILSRATNVIAEGEVMQLLNI------HDADTTEARYLEVIHSKTAKLFEA 177
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A GA+++ Q +++ L +G +LG FQL DD+LD D
Sbjct: 178 ATRIGAVLSGLPQEKEQALADYGMHLGTAFQLIDDVLDYSADA 220
>gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6]
gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6]
Length = 317
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E +ID+ L + + + +L A ++ LL GGK++R +L L +
Sbjct: 5 REILSKIDSELKKYVEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF
Sbjct: 56 ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S+ + K + +++ + ++ ++ F + F + KTGAL
Sbjct: 114 EALSNIEDSNKAHEVLKVLSKACVEV---CEGQTDDMEFEERFPTLYEYFDMISKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA+MA + E+E L + + +G+ FQ+ DD+LD D
Sbjct: 171 IVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217
>gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
Length = 320
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
+ D + LL+ + Q N +L A ++ L GGK+IR +L L +
Sbjct: 1 MELFDKTI---LLKIEEELNRQVNKEGKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDDI 57
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L ++E IH YSLIHDD+ MDN RRGKPTVHI Y E AI+AG+ L T AF
Sbjct: 58 DEVLTPAVSVELIHGYSLIHDDI--MDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFN 115
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
IS + + ++S +G + ++ + F + KTGAL+
Sbjct: 116 AISQMENL-EKAHEILKIVSKASVKVCEGQATDMEFEEREVIPTIDEYFDMISKKTGALI 174
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
E GA+MA ++ E++ + + + +G+ FQ+ DD+LD D
Sbjct: 175 VAPIEIGAVMADFTEEERKAICEYAKRIGMTFQIQDDVLDLIGD 218
>gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 338
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 81/233 (34%), Gaps = 6/233 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + ++ D + H+ + ++ L A GK +R L
Sbjct: 9 AIEAAMRAAFPLADERVARFYAMQEYHLGWR-DEELRPA---TFDPGKLLRPRLCLLSCR 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSM-DNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL + AAI+ IH +SLIHDD+ D R + +
Sbjct: 65 AVGGDPRDALPLAAAIQLIHDFSLIHDDIQDQSDTRRGRPTVWKLWGLAQGINTGDGMFT 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + ++ + T +G + E + + +
Sbjct: 125 VAHLSLHRLALTSLPAATILDVLRRFDETILTICEGQFLDLSYEGNLEIDE-AAYLAMIE 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL+ + E GA++ A + + L FG LG+ FQ+ DD+L D
Sbjct: 184 RKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIEDDVLGIWGDPA 236
>gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
Length = 339
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + + ++ + + + + + + S GGK++R L +
Sbjct: 19 AQLQALVAKEMQAVNEFIRERMASDVPMVPELASHLINS-------GGKRLRPMLTIAAS 71
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L N +++ A +E +H +L+HDD+ +D +RRG T + + +++ G+
Sbjct: 72 RLCGYNGTDHIKLAATVEFLHTATLLHDDV--VDESDMRRGAKTARMLWGNQASVLVGDF 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF+++ K+ I + + +Q +D E + +
Sbjct: 130 LLGRAFKLMVETKSLRALEIIADAASVIAEGEVMQL------AAAKDTGTTEDAYLRVIQ 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT AL A E GA+++ + +E L +G NLGI FQL DD LD L K
Sbjct: 184 AKTAALFAAATEIGAVISEKNGSEAAALESYGRNLGIAFQLVDDALDYGGRAASLGK 240
>gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
12009]
gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010]
Length = 323
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces hygroscopicus ATCC 53653]
gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces himastatinicus ATCC 53653]
Length = 335
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 19/234 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + Q ++ L + + A ++ + GGK+ R LV
Sbjct: 13 DRTLEADTQAGLTAVEEGLLEATKSDVPF--------ITEAAQHLVRAGGKRFRPLLVLL 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG + + ++ A++ G
Sbjct: 65 AAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSANARWGNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +++ + +T I G+ +
Sbjct: 123 DFLFARASHVLADLGPEAVRVQAEAFERLVTGQILETAGPRGRDPIEHY--------LDV 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+M+ A ++ L +GE LG+ FQLADD+LD D
Sbjct: 175 LAGKTGSLIAVSGRFGAMMSGADESIVNILTQYGERLGMAFQLADDVLDIASDS 228
>gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
Length = 385
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 77/248 (31%), Gaps = 22/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQT---QHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ ++ L + + + + + + + + L GGK++R
Sbjct: 32 AALAAEVENALREFFTSRQALVDAVGGGYREAVTTLEDFVLRGGKRVRPAFAWTGWLGAG 91
Query: 67 VNHLTA---------------LRVGAAIECIHCYSLIHDDLPSM----DNGYIRRGKPTV 107
+ + I S P++ + +
Sbjct: 92 GDPRGPGAGPVLRACSALELVQACALVHDDIIDASTTRRGFPTVHVEFEEQHRAGRWSGD 151
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ E AI+ G+ L +A ++I + R + S L G ++
Sbjct: 152 SAHFGEGVAILLGDLALAWADDMIRESGITPDQSARISPVWSAMRTEVLGGQFLDISNEV 211
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + + + + + GA +A A + R FG ++GI FQL DDL
Sbjct: 212 RADESIDAAMKVNRYKTAAYTIERPLHLGAALAGADDSLVSAYRRFGTDIGIAFQLRDDL 271
Query: 228 LDCEEDLP 235
L D
Sbjct: 272 LGVFGDPA 279
>gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
E2348/69]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAIGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNIIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
Length = 326
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 8/194 (4%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
+ GGK++R ++ A + + ++E IH ++IHDD+ +D+ IRR
Sbjct: 41 MNMISSGGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDI--VDDSPIRR 98
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
G ++ Q + A+ AG+ + FEI+++ S+ M + Q
Sbjct: 99 GVLSIQSQLGKDVAVYAGDYIFCKVFEILAASTYSNILEQVSKAMSQICEGELKQREDLF 158
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ KT L + + GA ++ A + L +G N+G+ FQ
Sbjct: 159 DTDLTF------KDYLYRIQKKTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQ 212
Query: 223 LADDLLDCEEDLPK 236
+ DDLLD D K
Sbjct: 213 IIDDLLDFTGDYKK 226
>gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
Length = 370
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
RI+ L + + T ++A L GGK++R L A++ +
Sbjct: 59 LARIEERLAEAISYTDKLAD-------VAARHLLLAGGKRVRPLLTLLAAAVDGQINDDV 111
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +E H +L HDD+ MD+ RRG T + AI+ G+ + + A ++S
Sbjct: 112 IEAAVVVELTHLATLYHDDV--MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVS 169
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ ++ Q +G G + + + KTG+L+ A
Sbjct: 170 DLGTRP---MKIQAQTFERLVLGQLYETTGVRENQDILDHY----IAVIEGKTGSLIAAA 222
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E G+++A AS+ + L +GE +G+ FQLADD++D D K
Sbjct: 223 GEYGSLLAGASEEVIQMLATYGELVGVAFQLADDVIDIVSDGASSGK 269
>gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
684]
gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
684]
Length = 322
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 15/227 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+E ++ L + ++ L S GGK++R LV CA L
Sbjct: 8 LEEEMALVEQQFRQDLDSEVTLIRKVGEYVLAS-------GGKRMRPMLVLLCARLAAYQ 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + V + +E IH +L+HDD+ +D+ +RRG + + + +++ G+ L + +F
Sbjct: 61 GESHIGVASVVEFIHTATLLHDDV--VDSADLRRGAASANNVWGNEASVLVGDFLFSKSF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I+ + S ++ LQ + D + E + + + KT L
Sbjct: 119 SIMVRTGSLPILQALSDATTNMAEGEVLQLI------STCDLDLSEERYMQVVRDKTAVL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ AC G I+ S +++ L+ FG LGI FQ DD LD D
Sbjct: 173 IAAACRCGGILGGVSAEQEQALQEFGMELGIAFQFMDDALDYVADQA 219
>gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + L + + Y + GG K+IR +
Sbjct: 1 MNLETIIKLTADDMAAVNETILSQLNSDVTLINQLGY--------YIISGGGKRIRPIIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILASRVLGYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAMFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++++ + + S+ + LQ M +
Sbjct: 111 VGDFIYTRSFQMMTALNSMRVLKLMSEATNVIAEGEVLQLMNCNDPNISE------DDYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A S AI+++A+ ++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEVAAHSSAILSNATPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis
str. Marburg]
gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyl pyrophosphate synthase; Short=FPP
synthase; AltName: Full=Geranyltranstransferase
gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported]
- Methanobacterium thermoautotrophicum
gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanothermobacter thermautotrophicus]
gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
Length = 325
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ D LL A + + GGKKIR L N A V AAIE IH +SLIH
Sbjct: 23 ISDITPDTLLKASEHLITAGGKKIRPSLALLSCEAVGGNPEDAAGVAAAIELIHTFSLIH 82
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ MD+ +RRG+P+VH+ + E AI+AG+ L + AFE + + +++
Sbjct: 83 DDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIRNGDSERVKDALAVVVD 140
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ M + + E + + KT AL+ A ++GAIM AS+ E E
Sbjct: 141 SCVK--ICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAATKAGAIMGGASEREVEA 198
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
L +G+ +G+ FQ+ DD LD D
Sbjct: 199 LEDYGKFIGLAFQIHDDYLDVVSDEE 224
>gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933]
gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4113]
gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4401]
gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4501]
gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4486]
gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4196]
gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4076]
gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC869]
gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC508]
gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
EC4024]
gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4115]
gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
FRIK966]
gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
EDL933]
gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
Sakai]
gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4196]
gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4113]
gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4076]
gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4401]
gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4486]
gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4501]
gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC869]
gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC508]
gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4045]
gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4042]
gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4115]
gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli]
gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
TW14588]
gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
TW14359]
gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC1212]
gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
G5101]
gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str.
493-89]
gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H
2687]
gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
LSU-61]
gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
1125]
gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
1044]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000]
gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthase) protein [Ralstonia solanacearum GMI1000]
Length = 322
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 63 GQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLYSRAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 121 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 175 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218
>gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
Length = 338
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ ++ ++ D + + A GGK++R L A L +
Sbjct: 25 AQGMNAVNQVILDRMQSEVPLIPAL-------AGHLISGGGKRLRPMLTLAGAELVGYSG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D +RRGK +I + ++ G+ L + +FE
Sbjct: 78 TRHHKLAAAVEFIHTATLLHDDV--VDGSDLRRGKAAANIIFGNPATVLVGDFLFSRSFE 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + + + Q+ + E + I + KT AL
Sbjct: 136 LMTEDGSLKVLK------ILSGASAIIAEGEVDQLTAQRKIDTSEQRYLHIIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A++A S+ E++ L +G NLG+ FQL DD LD + D
Sbjct: 190 AAASRIAAVVAECSEEEEQSLDEYGRNLGVAFQLVDDALDYDSDAA 235
>gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
Length = 290
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +KL +K + L ++ Q L++A+ Y L GGKKIRS ++ + +
Sbjct: 1 MQNKLARIAKDTNLFLKQF-------IKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGA 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F +N+ T + +GAA+ECIH YSLIHDDLP MD+ IRRGK + HI++ E TA++AGN L
Sbjct: 54 IFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
LT AFEI+ S +L + I+ L+ L+ G G+ GGQ LD + + + ++++ ++
Sbjct: 114 LTMAFEILVSSSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDME 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L F C I+ S + + G N+G++FQ+ADDL+D +
Sbjct: 174 IKKTGKLFSFCCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224
>gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94]
gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 326
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 16/236 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ R++ +L+ L+ S + T+ L+ A GGK+ R
Sbjct: 9 DPDLSARVAAGLGRVEDLLERELISEFSFV-TEAASHLMHA------GGKRFRPLFTLVA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + V A+ + MD IRRG + + ++D AI+ G+
Sbjct: 62 AGV-GPRPDAEEVVVASAVVELIHLATLYHDDVMDEAQIRRGAKSANARWDNSIAILTGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A +++S I ++ L + + G D D +
Sbjct: 121 FLFAHASRLVASLGED-AVRIIAETFAELVTGQTRETVGPGPDEDPIDHH------LRVL 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
KT +L+ I + A + LR +G +G+ FQ++DD+LD D K
Sbjct: 174 DEKTASLIDTCARYAGIFSGAPEEHVLALRRYGRAVGVAFQISDDILDICSTDSGK 229
>gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 305
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 35/247 (14%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ + + +RL+SA+RY LL K IR FLV + +FNV + + A+EC
Sbjct: 10 LITEINKILPEDSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVEC 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK------ 135
IH YSLIHDDLP MDN RRG+ + H ++D+ TA++AG+ LLT AFEI+SS
Sbjct: 70 IHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSNKR 129
Query: 136 ----------------------------TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
++ + S+ + Q + L
Sbjct: 130 CEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGS 189
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ++++ I MKT L +CE GAI+ A+ ++ L +G NLG+IFQ DD+
Sbjct: 190 CAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDI 249
Query: 228 LDCEEDL 234
D ++D
Sbjct: 250 RDYKQDE 256
>gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9211]
gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9211]
Length = 323
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK+IR +V + +
Sbjct: 2 ATVTELLQPVEIDLEHLLTDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
V+ + R E ++ +D RRG PTVH +++ A++AG+ L
Sbjct: 62 VDGELSSRHRRLAEITEMIHTASLVHDDVVDEASTRRGVPTVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ + KT
Sbjct: 122 QASWHLANLNNLDVVKLLSRVIMDLADGEIKQGLYRFDAGQSF------STYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L+ + ++ ++ + + L FG+ LG+ FQ+ DD+LD + L K
Sbjct: 176 ASLIANSSQAVGVLNDLPKEKLNSLYHFGKQLGLAFQVVDDILDFTGNDKQLGK 229
>gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
NA1000]
Length = 322
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++ ++ D + + + + GGK++R + A L ++
Sbjct: 9 EADMAGVNRLITDRMQSDVAIIPALAEHLIA-------AGGKRLRPLMTVAAARLAGADN 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L AFE
Sbjct: 62 DHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFE 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ M D + + I + KT L
Sbjct: 120 LMVETNSMKALEILARASRVIAEGEVLQLM------RSHDLNLSQAVYLEIIQAKTAELF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E+GA+ A + E LR +G NLG+ FQLADD LD E L K
Sbjct: 174 AAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGK 223
>gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367]
Length = 300
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 17 DTILDDLLLQTASHMQTQHND-RLLSAIRYA-LLGGKKIRSFLVTECASLFNVN--HLTA 72
D + L + +D +L +A+ Y+ L GGK++R L V
Sbjct: 12 DQWVPALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERH 71
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
R A+E +H YSLIHDDLP+MDN +RRG+PT H+++ A +AG+GLLT AF+ ++
Sbjct: 72 WRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLT 131
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ L+ + + + + +Q+ ++ K KTGAL+ +A
Sbjct: 132 ATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYA 191
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++G I+ A + + F + G+ FQ+ DD+LD
Sbjct: 192 VQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS 231
>gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5]
gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5]
Length = 323
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
Length = 323
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A + + + +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFESATQIGAILNDAPEEVEVAFQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
Length = 321
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 16/231 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 10 MQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLAPNA 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L +
Sbjct: 64 DFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSL 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ K + S + + L+ Q D + K KT L
Sbjct: 123 EYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 177 IAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367
gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Isoprenyl Diphosphate And Magnesium
Length = 309
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQ---------HNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
I+ L Q + + +L +A+ Y+ L GGK++R L
Sbjct: 1 MSLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATM 60
Query: 63 SLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
V R A+E +H YSLIHDDLP+MDN +RRG+PT H+++ A +AG
Sbjct: 61 QSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+GLLT AF+ +++ L+ + + + + +Q+ ++
Sbjct: 121 DGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVL 180
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
K KTGAL+ +A ++G I+ A + + F + G+ FQ+ DD+LD
Sbjct: 181 HKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS 232
>gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
11109]
gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
11109]
Length = 325
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+LQ + RI+ L L + + L+S GGK+IR L A +
Sbjct: 10 QRLQPDIDRINLALSGNLATHVRLISEVWDHILIS-------GGKRIRPLLFILAARMCG 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+GA E +H +L+HDD+ +D RRG+ + + + I+ G+ LL+
Sbjct: 63 CRGDHLPDIGAIFEYLHAATLLHDDV--VDAATERRGQSSANTIWGNQAVILVGDFLLSK 120
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A I + + +Q + LQ + G++ + E + F + KT
Sbjct: 121 ALSIAVETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLE------MTEEEYFDVITRKTA 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
LM AC+ GAI+ + + FG NLGI FQL DD+LD
Sbjct: 175 KLMSAACQIGAILGGVDGRLEAAMADFGLNLGITFQLIDDILDFTG 220
>gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 332
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ L + Q D ++SA GGK++R LV ++ A
Sbjct: 30 LIRRRLSSDVVLIN-QIADHIISA------GGKRLRPMLVMLAGRAVGNVGPEHHQLAAI 82
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ +
Sbjct: 83 IEFIHTSTLLHDDV--VDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMS 140
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I + + LQ + + + DE + + KT L GA+
Sbjct: 141 VMQILADATNRIAEGEVLQLLH------VHNPDTDEAAYLRVIERKTAVLFAAGTRLGAL 194
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + ++ L +G +LG FQ+ADD+LD +L K
Sbjct: 195 ASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGK 235
>gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
Length = 336
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ ++ + + N + S GGK++R L A
Sbjct: 16 DQLVELVAADMERVNAVILSRTGSEVTMIPEVANHLISS-------GGKRLRPNLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 69 QLTGYSGEGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G +A + E+ R FG NLGI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPAIAGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAK 234
>gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 342
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 18/235 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L +L + +R++ LD + + + A + + GGK+ R L
Sbjct: 23 SAELSDRLVDGLERVNARLD--------VVVDHDSPLVREASHHLVDAGGKRFRPMLTLL 74
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ L + A +E H SL HDD+ MD IRRG P+ + Y TAI+ G
Sbjct: 75 TSMLGTGISDEVVDAAAGVELTHLASLYHDDV--MDEADIRRGVPSANAVYGNSTAILIG 132
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A E+I+ + + I D +
Sbjct: 133 DLLFGKASELIAHLGPEAVILQARTFVRLCAGQI-------EDERQTPDGADPMEYYLKV 185
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG L+ A + GA+ + + E L +GE +G++FQL+DD+LD +
Sbjct: 186 LADKTGVLIAAAAQYGAMFSGCDERTVEVLGRYGELVGLVFQLSDDILDIASEAE 240
>gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 298
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ A ++ + GGK+ R LV A + + +E H +L HDD+ MD
Sbjct: 4 ITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDE 61
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P+ + ++D A++ G+ L A +I++ + +T I
Sbjct: 62 AAVRRGVPSANTRWDNSVAVLTGDFLFARASQILADLGPEAVRVQALAFERLVTGQI--- 118
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ QD + KTG+L+ +C GA+M+ A + + L +GE L
Sbjct: 119 ----LETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERL 174
Query: 218 GIIFQLADDLLDCEEDL 234
G+ FQLADD+LD D
Sbjct: 175 GVAFQLADDVLDIASDS 191
>gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 323
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L +L + + + L +A + GGK+IR +V + + +L
Sbjct: 11 VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDISLG 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D IRRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIMDLAAGEIQQGLNRFDTSLST------ETYLKKSYYKTASLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+S I+++ S L +G++LG+ FQ+ DD+LD L K
Sbjct: 184 KSAGILSNVSPQSANNLYNYGKDLGLAFQIVDDILDFTGSMDTLGK 229
>gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314]
gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314]
gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
Length = 350
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 85/222 (38%), Gaps = 9/222 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
RID + + + + + + A GGK+ R + +
Sbjct: 36 ARIDNAMQQVEDRLLKELSIGEDFLVDKVTHLARAGGKRFRPMFALLASEFGAKPLSDNV 95
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A + I + ++ MD +RRG P+ + ++D AI+AG+ LL +A I+S
Sbjct: 96 IKAAVVVEITHLATLY-HDDVMDEATMRRGVPSANSRWDNSVAILAGDILLAHASRIMSQ 154
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + +T + G + + KT L+ A
Sbjct: 155 LGMETVAHFAETFGELVTGQMRETVGARGGDPVDHYMK--------VIREKTAVLIASAG 206
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G++ A A+ + L+ FG +G+IFQ+ DD++D +
Sbjct: 207 FLGSMHADATPEHVDALKKFGAAVGMIFQIVDDIIDIFSETA 248
>gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
Length = 322
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 63 GKHHHELAAVVEFIHTATLLHDDV--VDESELRRGRRTANAVFGNAASVLVGDFLYSRAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 121 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 175 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218
>gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
2) (spore germination protein c3) [Staphylococcus
capitis SK14]
gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
caprae C87]
gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
2) (spore germination protein c3) [Staphylococcus
capitis SK14]
gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
caprae C87]
Length = 319
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + T ++ L S GGK++R V +
Sbjct: 6 INNEIKKVEERLERAIQSTDQTLEEASFHLLSS-------GGKRVRPVFVILSSQFGTSE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRG+PT+ ++D+ TAI+ GN LL
Sbjct: 59 GTSEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S K +I S ++ + Q ++ KT L
Sbjct: 119 QHLSEIKDARVHSIISNSIVDVCRGELFQFQDQFNSEQNITNYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ A E GAI + AS+ +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLATEVGAITSGASKETIRKLKLIGHYIGMSFQIIDDVLDFTSSEKK 220
>gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277]
gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277]
Length = 388
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 17 DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTA 72
D +L + +H+ + A+ Y L GGK R+ LV A++ A
Sbjct: 107 DALLAEFKAFLNAHLPSSPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 166
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
V A E +H YSLIHDDLP+MD+ +RRG+P++H+++DEVTAI+AG+ L T+AF I+
Sbjct: 167 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 226
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I+ +LS I + +++ + ++ + KT L+ +
Sbjct: 227 KAPLDADVRIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIAAS 286
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++G ++A + E R+ G +LG+ FQ+ADD++D +
Sbjct: 287 LQAGCVVAGLDEAEAARIYDIGLDLGLAFQIADDIIDATQSAE 329
>gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
Length = 324
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+++ I+ L L ++ + +++ GGK++R V + +
Sbjct: 10 LKKDMDVIEKEL--YLS-----VEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYD 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V +E IH SL+HDD+ +D+ RRGKPTV ++D A+ G+ + A
Sbjct: 63 IDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKAL 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E+ + K I ++ M+ ++ Q D + D + + + KT L
Sbjct: 121 ELTTHLKQPEIHQILAKAMVEMSIGEMEQI------RDFFNTEQDVRRYLLRIRRKTSLL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ +C+ GA+ A A + L FG N+G+ FQ+ DDLLD K+
Sbjct: 175 IAVSCQLGALAADADRQVANSLYRFGYNVGMAFQIQDDLLDLCG-TEKQ 222
>gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS]
gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS]
Length = 323
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVISEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
Length = 293
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTALRVG 76
+ L + H + L GGK+ R L+ + A V
Sbjct: 9 NEFESYLHDNQPEISGFHPHFEKAFWEMVLNGGKRFRPNLLLSVVCAEAKEQAKNAFDVC 68
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+IEC+H YSLIHDDLP+MDN +RR PT+H +YDEV+AI+ G+GL TY+F ++++
Sbjct: 69 LSIECLHTYSLIHDDLPAMDNAALRRNHPTLHCKYDEVSAILIGDGLNTYSFYLLANAHF 128
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L+ IG + + + ++ I KT L+ + + G
Sbjct: 129 APSVVAELISCLAENGGIGGMVLGQALDCYFEHTTLPLDKLQFIHTHKTAKLIAASLKMG 188
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AI+A+ S + ++ L FG LG+ FQ+ DD++D +D
Sbjct: 189 AIIANLSLDMQKFLYDFGLVLGLYFQIRDDIIDSIQDES 227
>gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C]
gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C]
Length = 336
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 8/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L ++L + + +H L + RYALL GK +R L+ A + L
Sbjct: 12 DFLAEVLAKEFTRRWPEHAGGLDAVHRYALLPTGKLLRPRLLALSALAVGGSLRAVLPAA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
E H SL+HDD+ +D +RRG+P VH ++ AI+AGN L F ++
Sbjct: 72 VGFEAAHTGSLLHDDI--IDQDALRRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAA 129
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ R + G Q G ++ D + + KT AL AC
Sbjct: 130 HGIPHQRIVAAMETQAKAGQQICRGAALELTLAGDLEAPPDVYLEMARAKTAALFDAACT 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GA++ ++++ L FG++LG FQ+ DDLL D K
Sbjct: 190 VGAVLGGGTEHQIAALGAFGDHLGCAFQIRDDLLPYLGDGARAGK 234
>gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 294
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
RI+ L +++ + + L A++Y+ L GGK++R+ L+ F VN
Sbjct: 13 RINKKLFEIIQEL-----PFQDSVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALD 67
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ AA+E +H YSLIHDDLP +DN Y RRGK + HI+Y E A++AG+ L AF I+S+
Sbjct: 68 VISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAFNILSN 127
Query: 134 -PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
+ D+IR +++ ++ IG GM GQMLD + + I+ +++ I KT L+
Sbjct: 128 SNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKINISELEKINLYKTAFLIR 187
Query: 191 FACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++ S+ L F ++G+ FQ+ DD+LD + D+ K
Sbjct: 188 CSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLKNDIKK 234
>gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 300
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 83/242 (34%), Positives = 134/242 (55%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L + I+ IL L + ++ N L A++YALL GGK++R+FLV
Sbjct: 1 MN-NFLLSLTKIQNHINLILKKYLN-----IFSKKNMNLTLAMKYALLNGGKRLRAFLVY 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ NV+ + A+IECIH YSLIHDDLPSMDN RRG+ + H++++E AI+A
Sbjct: 55 CIGKMLNVSSNNLDCIAASIECIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILA 114
Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
G+ L + AF I+S+ + N R +++ L++ G +GM GQ LD++++ I Q
Sbjct: 115 GDSLQSLAFNILSTVNMPDVSVNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQ 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I K KT L+ A + ++ ++ L + +++G+ FQ+ DD+L+
Sbjct: 175 LEEIYKYKTSFLIYAATRMTILSSNIKNKKILINLIKYSKSIGLAFQIQDDILNVIG--S 232
Query: 236 KK 237
KK
Sbjct: 233 KK 234
>gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 321
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 78/220 (35%), Gaps = 15/220 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
R++ +LD+ + L GGK+IR C +
Sbjct: 14 LDRVERLLDERAHADHVDLAKAGRTLLE-------AGGKRIRPLFALICG--LGEREWSE 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A + +D +RRGKPTV Y + A+ G+ L A ++++
Sbjct: 65 DVAKIAAALEMIHMATLVHDDVIDRADLRRGKPTVRKSYGNLAAMYTGDYLFARAIQLLA 124
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ ++ L Q ++ KT L+ +
Sbjct: 125 EVDNLEVHRLMARGIVLLCEGEIEQIEDFYNWSQGVMTYLRR------IHRKTALLISLS 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C+ GA++ A + E L FG +G+ FQ+ DDLLD
Sbjct: 179 CQLGAMVGGAPEREVAALARFGHAVGMAFQIVDDLLDFTG 218
>gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
Length = 336
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + +Q ++ L D + +A L GGK+ R LV
Sbjct: 13 DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++D A++ G+
Sbjct: 66 AQFGDPEAPGVVPSAVVVELTHLATLYHDDV--MDEATVRRGVESANARWDNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A +I++ + +T I + QD +
Sbjct: 124 FLFSRASQILAGLGPEAVRIQAEAFERLVTGQI-------LETAGPQDGRDPVDHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ A GA+M+ A E L +GE LG+ FQLADD+LD D
Sbjct: 177 SGKTGSLVAVATRYGAMMSGAGSEAVEILTQYGERLGVAFQLADDVLDIASDS 229
>gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
Length = 291
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
+ L++ R+ + LD L L ++++Y+ L GGK++R L
Sbjct: 1 MVESLEQLKARVTSYLDTHLA------NDVDQSTLAASMQYSVLAGGKRLRPTLTLATVE 54
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F +R A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+G
Sbjct: 55 IFGGELTEDVVRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDG 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF+ ++ + + L L+ + ++ + Q+ + +
Sbjct: 115 LLTLAFQWVTDNQLPATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYLHR 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
KTGAL+ +A +G I+ + L FG + G+ FQ+ DDL+D K+
Sbjct: 175 QKTGALLRYAVLAGGIITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDVVGTTTAMGKR 232
>gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15]
Length = 322
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ +D ++ L + + Q + ++SA GGK++R ++ A+
Sbjct: 10 VAEDMHAVDAVIRRRLGSEVALIN-QIGEYIISA------GGKRLRPVILLLMANALGYR 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 63 GQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAAFGNAASVLVGDFLYSRAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 121 QMMVQADSMRVMQILADATNVISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A + +G +G FQ+ DDLLD
Sbjct: 175 FEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218
>gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str.
7]
gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase
[Sulfolobus tokodaii str. 7]
Length = 329
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ ++ L L A Y GGK++R ++ A
Sbjct: 2 SFEDYFNRIVENVNINIEKYL--------KGDIQELYEASFYLFKAGGKRLRPLILVSSA 53
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A GA++E +H ++LIHDD+ MD RRG PTVH+++ AI+AG+
Sbjct: 54 DLLGGDLNRAYLAGASVEVLHTFTLIHDDI--MDEDTTRRGMPTVHVKWGIPMAILAGDL 111
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ 181
L AFEI++ + N ++ T I + + +D+ E + +
Sbjct: 112 LHAKAFEILNEAFRGMSSNKITRAFEIFTKAIIIISEGQALDMQFEDKVTVSEEEYLDMI 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K KT L + G ++A ++ E + L +G NLGI FQ+ DD+L D
Sbjct: 172 KRKTAMLFSSSAALGGLIATDNEKEIQALADYGLNLGISFQIVDDILGLIADEK 225
>gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150]
Length = 291
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ F +
Sbjct: 4 NEKLEKIGLTIEDF------YKSQQVSPDLTEVILYSVKAGGKRIRPLLLLGLIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQVIRLEDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
Length = 338
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ ++T++ + + S GGK++R L A +
Sbjct: 25 ADDMAAVNTLILSKCGSDVEMIPEVAKHLIDS-------GGKRLRPMLTLSAARMLGYTG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + A++E +H +L+HDD+ +D +RRGK + + + +++ G+ LL AF
Sbjct: 78 DHHVTLAASVEFMHTATLLHDDV--VDESDMRRGKQSARMVWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + + +Q Q E + + KT AL
Sbjct: 136 MMVDAGSMEALDVLSTASMVIAEGEVMQL------SAAQSMETTEDDYMAVIRGKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
ACE G I+A A + ++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAACEVGPILADAGKPARDALRSYGLNLGLAFQLVDDALDYGGSKADLGK 239
>gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4]
gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4]
Length = 323
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYHGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M ++ ++
Sbjct: 111 VGDFIYTRSFQMMTELGSIKILKLMSDAVNVIAEGEVQQLMNCNNPDTTEENYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A +N + L+ +G+ LG FQL DD++D D
Sbjct: 166 -VIYSKTARLFESATQIGAILNDAPENVEVALQNYGKFLGTAFQLIDDVMDYTSD 219
>gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
Length = 332
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++T++ + + + + L+ A GGK++R L A + + + +
Sbjct: 25 VNTLIRERMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAARMCGYDGPYHVHL 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A +E IH +L+HDD+ +D RRG+PT ++ +D ++++ G+ L +F+++
Sbjct: 79 AATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETG 136
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ +I + ++ LQ + +D + + + KT AL A E
Sbjct: 137 SLRVLDILANAAATIAEGEVLQLTAASDLATTEDIY------LQVVRGKTAALFSAAMEV 190
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G +A K+ L +G+ LGI FQ+ DDLLD
Sbjct: 191 GGEIADQDAATKQALFDYGDALGISFQIVDDLLDYGG 227
>gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
Length = 290
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HL 70
++I+ L L L S++ Y+L GGK++R L + +
Sbjct: 9 KEQIEDYLSKSLA------TDIDQATLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLND 62
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
LR +A+E +H YSLIHDDLP+MDN +RRGKPT H ++ A +AG+GLLT AF+
Sbjct: 63 DLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQW 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + L L+ + ++ + + ++ Q+ + + KTG L+
Sbjct: 123 VADNHLPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIR 182
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+A +G IM S K+ L FGEN G+ FQ+ DDL+D E++ K
Sbjct: 183 YAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231
>gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 361
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 72/260 (27%), Gaps = 32/260 (12%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLV 58
+ LPS+ + +L D L + + + + L GGK++R
Sbjct: 5 DADLPSE-------FERVLRDFLHDAGESICRIEPTFGPAVSTLRDFVLGGGKRLRPTFA 57
Query: 59 TECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
+ + + S P++ + R
Sbjct: 58 WWAWRGAGGTPDSDEAEGVLRAVASLELIQACALIHDDVIDSSDSRRGSPTVHVAFAARH 117
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ E A + A + + +L GQ
Sbjct: 118 TRERWLGSAEAFGQAAAVLIGDLALAWAEDMFAECGLPPATIAAARPAWRAMRTEVLAGQ 177
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGI 219
LD+ + +T V ++ + GA +A A + L FG LG+
Sbjct: 178 YLDVHTQATGDTSVEAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLDFGGELGV 237
Query: 220 IFQLADDLLDCEED---LPK 236
FQL DDLL D K
Sbjct: 238 AFQLRDDLLGVFGDPSVTGK 257
>gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG2H5]
Length = 575
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 10/224 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
KR++ I+ D L + +RL A+ + GG K++R+ + H
Sbjct: 260 RKRVEGIIMDSLGKMQQ-------ERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDG 312
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+GA+IE IH ++L+HDD+ +D IRRG VH+ YD+ TAI AG+ +L FEI+
Sbjct: 313 HYTLGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEIL 370
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + + + + Q + E + KT A+
Sbjct: 371 AESPEIDADKLAFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFET 430
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+GAI+A AS + + +G NLG+ FQL DDL+D D
Sbjct: 431 CATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTE 474
>gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
Length = 323
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 103/237 (43%), Gaps = 16/237 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + ++ + ++ ++ L + + + GGK+IR +
Sbjct: 1 MDLNEIQALSAKDMQAVNAMISQQLQSDVALINQLSFYIING-------GGKRIRPLIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A+ N + IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LVANALNYQGDRHITCATFIEFIHTATLLHDDV--VDESTLRRGKDTANAIFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++ + + S + + LQ M + ++
Sbjct: 112 GDFIYTRAFQLMARLGSLPVMQVMSDAVNVIAAGEVLQLMNCNDPDTTEQSYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KT L A E A+++ A++ + + ++ +G LG FQL DD+LD D+ K
Sbjct: 166 VIYSKTARLFEVAAECSALLSEATEQQVQAMKLYGRYLGTAFQLIDDVLDYCADVDK 222
>gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
Length = 302
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 87/238 (36%), Positives = 121/238 (50%), Gaps = 16/238 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
L + RI L L A + L SA+ +A+ LGGK++R L A+L N
Sbjct: 12 LTQAQHRIQQDLLTALEAFA------IPEPLRSAVHHAVMLGGKRVRPALCYATAALKPN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N R AIE IHCYSL HDDLP MDN +RRG+PT H+ Y E TA++AG+ L +
Sbjct: 66 QNSAAVRRAAVAIEFIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGDILQSM 125
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQV--FMIQK 182
AFEI+ S + + ++L M+ GQ+LD+Q E Q I +
Sbjct: 126 AFEILGSRLFDQGPAVEASIVLKQMQILATASSKMVNGQVLDLQSEGKKIDQQALETIHR 185
Query: 183 MKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL+ A A+ + + +LR FG+ +G+ FQ+ DD+LD D L K
Sbjct: 186 NKTGALISAAIMMAAVTIFDGTDLAIPKLREFGQAIGLAFQVQDDILDIISDTDVLGK 243
>gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
Length = 340
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
G+ + ++ + R++ ++ + + A GGK++R L A
Sbjct: 20 EGIVTLVRADMDRVNALILSRTGSDVTMIPEV-------AQHLISSGGKRLRPMLTLATA 72
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L A+++ A++E +H +L+HDD+ +D+ +RRGK + + +++ G+
Sbjct: 73 ALSGYEGDGAVKLAASVEFMHTATLLHDDV--VDDSEMRRGKLAARMLWGNEASVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + + Q ++ DE + +
Sbjct: 131 LLGQAFRMMIEVGSMRALDILSTAAVVIAEGEVAQL------AAAKNIATDEDAYLAVIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L ACE G ++A + E R +G NLGI FQL DD LD DL K
Sbjct: 185 GKTAELFAAACEVGPVLAGRPEAEMAAARAYGMNLGIAFQLVDDALDYGGSGADLGK 241
>gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 319
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51]
gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 326
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L + L+ ++ L S GGK++R L + A F + AL
Sbjct: 21 VEERLRESFLRAGDTIKDSCLLLLDS-------GGKRLRPLLTLQSAQCFGPLNSAALDA 73
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E IH SLIHDD+ +D+ RRG PT++ Q A++AG+ + AF I+++
Sbjct: 74 AVAAELIHMASLIHDDV--IDHSDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKH 131
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + S+ Q D ++ +Q F KTG L+ C S
Sbjct: 132 LLTSMSYLVDAIQSMCDGEIQQAE------QRCDLAVEPSQYFQRIAQKTGILLASCCCS 185
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA A A+Q E L +G NLG +Q+ DD+LD
Sbjct: 186 GAASAGANQEAVEALGQYGMNLGYAYQIIDDILDFTG 222
>gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
Length = 325
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ E+ + +D ++ L + Y + GGK++R ++ A+
Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLINQIG--------EYIVSAGGKRLRPVILLLVANALGY 64
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + A
Sbjct: 65 KGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLYSRA 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + I + ++ LQ + D + E + + + KT
Sbjct: 123 FQMMVQANSMRIMQILADATNIISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAK 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + GA+++ A +E +G +G FQ+ DDLLD
Sbjct: 177 LFEAAAQIGAVLSDADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221
>gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267]
gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267]
Length = 659
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 17 DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTA 72
D +L + +H+ + A+ Y L GGK R+ LV A++ A
Sbjct: 378 DALLAEFKAFLGAHLPSNPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 437
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
V A E +H YSLIHDDLP+MD+ +RRG+P++H+++DEVTAI+AG+ L T+AF I+
Sbjct: 438 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 497
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I+ +LS I + +++ + ++ + KT L+ +
Sbjct: 498 RAPLDADARIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIAAS 557
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++G ++A + E R+ G +LG+ FQ+ADD++D +
Sbjct: 558 LQAGCVVAGLDETEAARIYDIGLDLGLAFQIADDIIDATQSAE 600
>gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
Length = 295
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 11/233 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L+E + ++ ++ + Q RL+ +I Y++ GGK+IR L+ E F+
Sbjct: 3 LEEKLQGVEKEIEGF------YEAKQIAPRLVESILYSVRAGGKRIRPLLLLELLEAFHA 56
Query: 68 NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+V AA+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L
Sbjct: 57 PILEAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDSLFLD 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++ ++ +LS ++ + + Q+ +I KTG
Sbjct: 117 AFGCVAEADLPASIQVQLIALLSDASGTAGMVAGQVLDMEGEGASLTLDQLQVIHANKTG 176
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ + ++ I+ L G +LG+ FQ+ DD+LD D L K
Sbjct: 177 RLLAYPFQAAGILLELEPAVATLLEEIGIHLGLAFQIRDDILDVTADFASLGK 229
>gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius HKU10-03]
gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius HKU10-03]
gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus
pseudintermedius ED99]
Length = 318
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L + K+I+ L L+ S +Q+ + L S GGK++R V + N
Sbjct: 6 LNQEIKKIENTLKQLIQSEDSTLQSAADHLLSS-------GGKRVRPLFVILSS-YVGEN 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + +D RRGK T+ ++D+ TAI+ GN LL A
Sbjct: 58 PANDAAYRVATALELIHMATLVHDDVIDFSDKRRGKLTIEKKWDQPTAILTGNFLLARAL 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S + S ++ + Q + ++ KT L
Sbjct: 118 EHLSYIQDSRIHQTLSHAIIEVCRGELFQFQDQFRAEQSITNYLRR------INRKTALL 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
M A E GA+ +H ++R G ++G+ FQ+ DD+LD K
Sbjct: 172 MQLATEVGAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLDFTSTEKK 219
>gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
FSL F6-596]
gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
FSL F6-596]
Length = 324
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+R + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 63 SPNADFEMVRDASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S++ + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDIAAHKMLSRVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G I++ SQ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGIVSGQSQADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
Length = 323
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + L ++ ++ + D L + N + GGK+IR +
Sbjct: 1 MNLEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + ++ S + + LQ M D I E
Sbjct: 112 GDFIYTRAFQMMTSLASLRVMSVMSDAVNVIAEGEVLQLMNC------NDPDITEDSYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI++ AS ++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAAAQSSAILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGK 225
>gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
Length = 321
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q+ +R++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 25 WMQDGVRRVEQALARLLCAED-----DGETELMAAMRYATLHGGKRTRALLCLATGALAD 79
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 80 TPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 139
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S + I L+ + L + + ++ ++ + +MK+G
Sbjct: 140 AFLTLASLDAPSDNRIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKSG 199
Query: 187 ALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ + GA+ A A L + G+ Q+ DD+LD D
Sbjct: 200 ALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATADTA 252
>gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
Length = 341
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + KR++ + + + N + S GGK++R L A
Sbjct: 21 DQLVELVAADMKRVNATILSRTGSEVTMIPEVANHLISS-------GGKRLRPMLTLAMA 73
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 74 NLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDF 131
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 132 LLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQL------AAAKNTATTEDEYLAVIR 185
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G +A + E+ R FG N+GI FQL DD+LD K
Sbjct: 186 GKTAELFAAACEVGPAIAERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAK 239
>gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II
'5-way CG']
Length = 330
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+++ ++ L + ND + + + GGK++R L+ + + +
Sbjct: 17 EQDLLAVENCLIEF--------GGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYS 68
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D+ +RRGK + + + TA++ G+ L A
Sbjct: 69 GPHISLLSAVVEFIHTATLLHDDV--VDHAEMRRGKLSANQIWGNQTAVLVGDYLYATAL 126
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + ++ + ++ L+ + + E + + KT AL
Sbjct: 127 WMATGVHNHEINDTLTLACRKMSEGEVLELI------LDNNLSAREEDYLNVVECKTAAL 180
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C GAI+ A +K+ L FG N+G+ FQ+ADD LD
Sbjct: 181 TAGTCRIGAILGGADPEKKKSLEDFGYNIGMSFQIADDALDYMA 224
>gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium tuberculostearicum SK141]
gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium tuberculostearicum SK141]
Length = 334
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ + ++ L + + ++ + + + GGK+ R +
Sbjct: 15 DPQLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVS-------HLSKAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + V AA + MD RRG + + +++ AI+AG+
Sbjct: 68 SE-YGPRPGCKEVVKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T + L + + G+ ++ +
Sbjct: 127 ALLAHASRLMSELDTHTVG-HFADTFEELVTGQMRETIGAGEANAVEHYTA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L+ A GA + AS L G +G+IFQ+ DD++D D K
Sbjct: 179 REKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGK 236
>gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
Length = 325
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ LQ ++ L L+ ++ + +++ GGK++R V L
Sbjct: 7 KAFLQPYIYEVEQRLQTLIQSESTVITN-------ASMHILNSGGKRVRPMFVLLSGFLA 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+R ++E IH SL+HDD +DN RRG +VH+ +++ TAI G+ LL
Sbjct: 60 KGEKEHLIRTAVSLELIHMASLVHDDY--IDNSDKRRGNTSVHMAFNKDTAIRTGHFLLA 117
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A E I+ I S+ +L + QM D + I T+ KT
Sbjct: 118 RALENIAEINDSQYHQIFSKTILEVCFGE------FDQMADRFNYPITFTEYLRRINRKT 171
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ +C GA+ + ++ FG +G+ +Q+ DD+LD D L K
Sbjct: 172 AILIEASCHLGAVSTNLDSYTTYHVKQFGHCIGMSYQIIDDILDYTSDEVTLGK 225
>gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 293
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 126/229 (55%), Gaps = 10/229 (4%)
Query: 17 DTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+T L+ + + + +L A++Y+ GGK+IR+ V FN++
Sbjct: 4 NTSLESFNIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCH 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ AIECIH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + FEII++
Sbjct: 64 KIAFAIECIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCF 191
++ ++ + GL+GM+GGQ +D +++ + + ++ KT +
Sbjct: 124 LDINDIYKLK-KVNIVFAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRA 182
Query: 192 ACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ I++ + +E E L + +G+ FQ+ DD+LD ++L K
Sbjct: 183 SIVLPYIVSKYNNDEFETILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231
>gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 309
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 12 MN---KQVIDKYTQRHELYLEQLLNEII-----IPAPQIRSALHYALFSGGKRIRPILVY 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 64 LAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 123
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ ++ L + L + G+ GM+ GQ LD+ +
Sbjct: 124 GDGMQALAIEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEE 183
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K LR +G+++G++FQ+ DD LD
Sbjct: 184 QLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 241
>gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
Ex25]
Length = 323
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKTIQALTADDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCNDPDTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A ++ + ++ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 381
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 59 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 110
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 111 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 168
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 169 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 223
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 224 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 282
Query: 236 K 236
K
Sbjct: 283 K 283
>gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251]
Length = 282
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAA 78
++ LL ++ H + + + GGK+ R L+ + +N A A
Sbjct: 4 FENFLLNHLPASKSIHPTYEEAVQKMLIAGGKRFRPALLLGVVNAYNPLMIGGAYHAAYA 63
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H YSLIHDDLP+MDN +RRG+PT+H+ +DEVTAI+AG+ L TYAFE++S+
Sbjct: 64 IELLHTYSLIHDDLPAMDNSPLRRGEPTLHVLFDEVTAILAGDALNTYAFEVLSNAPFSD 123
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ L+ + + ++ + V ++ KT L+ + + GAI
Sbjct: 124 FTRVELIRELATNGGLNGMVLGQAIDCYFENRVLSIDDVKILHTNKTAKLIAASLKMGAI 183
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ + E L FG LG++FQ+ DD+LD ++ K
Sbjct: 184 IVG-EEKLAETLYDFGIKLGLLFQIQDDILDVTQSSQEAGK 223
>gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 334
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ + ++ L + + ++ + + + GGK+ R +
Sbjct: 15 DPQLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVS-------HLSKAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + V AA + MD RRG + + +++ AI+AG+
Sbjct: 68 SE-YGPRPGCEEVVKAATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T + L + + G+ ++ +
Sbjct: 127 ALLAHASRLMSELDTHTVG-HFADTFEELVTGQMRETIGAGEANAVEHYTA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L+ A GA + AS L G +G+IFQ+ DD++D D K
Sbjct: 179 REKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSDPKESGK 236
>gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
Length = 327
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 7 IQQDLKDEVAQLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ N + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I+ + I K K
Sbjct: 118 SQSFKLMVA-----SGSIKAMNVLAKASAIISKGEVVQLVKLNERRLINIEEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L +C GAI+A+ S + + + FG+ LG IFQ+ DDLLD
Sbjct: 173 TAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLG 220
>gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b]
Length = 298
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 1 MN---KQVIDKYTQRHELYLEQLLNEIV-----IPAPQIRSALHYALFSGGKRIRPILVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 53 LAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 112
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ ++ L + L + G+ GM+ GQ LD+ +
Sbjct: 113 GDGMQALAIEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEE 172
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K LR +G+++G++FQ+ DD LD
Sbjct: 173 QLRGIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230
>gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
maltophilia K279a]
gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
maltophilia K279a]
Length = 332
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ L + Q D ++SA GGK++R LV ++ A
Sbjct: 30 LIRRRLSSDVVLIN-QIADHIISA------GGKRLRPMLVMLAGHAVGQAGPEHHQLAAI 82
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ +
Sbjct: 83 IEFIHTSTLLHDDV--VDESSLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMP 140
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I + + LQ + + + DE + + KT L GA+
Sbjct: 141 VMQILADATNRIAEGEVLQLLH------VHNPDTDEAAYLRVIERKTAVLFAAGTRLGAL 194
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + ++ L +G +LG FQ+ADD+LD +L K
Sbjct: 195 ASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANAEELGK 235
>gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 323
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
Length = 336
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ + + + N + S GGK++R L A
Sbjct: 16 DQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L + +++ A++E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 69 NLAGYSGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGKLSARMVWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G ++ + E+ FG NLGI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPVLGGRPKAEETAAASFGMNLGIAFQLVDDVLDYGGKSAK 234
>gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 318
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
bacterium GD 1]
gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
bacterium GD 1]
Length = 282
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 6/224 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLT 71
+ +T L + L T+ + + L + + GGK+ R L+ A+ ++
Sbjct: 1 MQNFETFLLENLP-TSKSIHPTYEKALQQML---IAGGKRFRPALLLGVVAAYNSLMLDG 56
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A A+E +H YSLIHDDLP+MD+ +RRG+PT+H+ YDEVTAI+ G+ L TY+FE++
Sbjct: 57 ARHAAYAVELLHTYSLIHDDLPAMDDSPLRRGEPTLHVLYDEVTAILVGDALNTYSFEVL 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ ++ L+ + + +++ ++ + ++ KT L+
Sbjct: 117 SNAPFSDYTRVKLIQELAKNGGLNGMVLGQAIDCYFENKPLNVADIKILHTNKTAKLIAA 176
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + GAI+ + ++L FG LG++FQ+ DD+LD +
Sbjct: 177 SLKMGAIIVGQ-EELGDKLYAFGIKLGLLFQIQDDILDVTQSSE 219
>gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 338
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ R++ +L + + ++ + T+ + L+ A GGK+ R +V
Sbjct: 14 DPDLEKAVRVGLARVEDLLRESVRSESAFV-TETSRHLVDA------GGKRFRPIVVLLA 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + AIE H +L HDD+ MD RRG + + ++ AI+ G+
Sbjct: 67 AQFADPEAVGVVPAAVAIELTHLSTLYHDDV--MDEAPRRRGAASANTRWTNTVAILTGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +I + + + L + + +
Sbjct: 125 YLFARASDITADLGPE-------ATRILARTIATLCEGQIRETVGPAPGQDPVEHYLRVI 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L+ + GA++A A + L FGE G+ FQL+DD++D D K
Sbjct: 178 TDKTASLIATSGRLGAMLAGADPITVDTLATFGELFGVAFQLSDDIIDVASDPVDSGK 235
>gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
Length = 298
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 1 MN---KQVIDKYTQRHELYLEQLLNEII-----IPAPKIRSALHYALFSGGKRIRPILVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 53 LAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 112
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ +++ L + L + G+ GM+ GQ LD+ +
Sbjct: 113 GDGMQALAIEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEE 172
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K L+ +G+++G++FQ+ DD LD
Sbjct: 173 QLREIHLLKTGKLILACFEMVLAAQNEVSEQIKSALKTYGKHIGLVFQMQDDYLDLYA 230
>gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
Length = 334
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 78/241 (32%), Gaps = 19/241 (7%)
Query: 1 MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
M+ L +K L+ + + L L+ + + L + IRY L G K++R L
Sbjct: 1 MSHSLEAKDLKACRQIVQDTLQSLM------LDKRTPQALYAPIRYTLEQEGAKRVRPVL 54
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + + +
Sbjct: 55 ALLM-------QAYLRPEAPLAASPIVALEVFHNFTLLHDDVMDNSPVRRGKPSVYAKYG 107
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDE 174
+ L A I++ + L N ++ GQ Q +++ +
Sbjct: 108 LTPAILSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIMEGQQLDLEYEQLDYVSK 167
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q + KT L+ A GAI++ S E E FG NLG+ FQL DD LD D
Sbjct: 168 EQYLEMIGYKTAVLIATATRFGAILSKGSVTELESSYAFGWNLGLAFQLQDDYLDLYGDS 227
Query: 235 P 235
Sbjct: 228 E 228
>gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018]
gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018]
Length = 286
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+++ + L L + D L ++ GGK+ R L+
Sbjct: 1 MKDLLNSFEDYLLKNLP-ISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSL 56
Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + V +E +H YSLIHDDLP+MDN +RRG T+H +YDEVTAI+ G+ L T A
Sbjct: 57 LVPNAMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I++ + L+ I + + + I Q+ + KT
Sbjct: 117 FNLIANASLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTAR 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L+ + + GAI++ +E+L FG +LG++FQ+ DD++D
Sbjct: 177 LIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIID 218
>gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5]
gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Methanococcus maripaludis C5]
Length = 317
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 15/227 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
+E +ID+ L + + + +L A ++ LL GGK++R +L L +
Sbjct: 5 REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L ++E IH Y+L+HDD+ MDN RRG PTVH Y E AI+AG+ L AF
Sbjct: 56 ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E +S+ + K + +++ + ++ ++ F + F + KTGAL
Sbjct: 114 EALSNIEDSKKAHEVLKVLSKACVEV---CEGQTDDMEFEERFPTLDEYFDMISKKTGAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA+MA+ + E++ L + + +G+ FQ+ DD+LD D
Sbjct: 171 IVAPVEIGAVMANCTPEERKALCNYAKRIGMTFQIQDDVLDLIGDQK 217
>gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 313
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDT---ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ S L++ ++ I+D L A ++ L +RYAL L GK+IR+ ++T
Sbjct: 1 MESSLKDIEALMEKRASIIDSRLNALAYAIE---PMLLSEVVRYALSLKGKRIRTTVLTL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ A+ A+E +H SL+ DD+ +D IRRGK T++ ++ A+IA
Sbjct: 58 SCEAAGGDMERAMAPAMAVEMLHNTSLVLDDI--IDKSDIRRGKATINNRWGNEMALIAC 115
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L+ A I+ + + + G+ L+++ + + I
Sbjct: 116 DVMLSLAIREITRSDL------GLTKQMIDCVADSMLRLAEGEALELEKKKFTIDDYYKI 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT +L + ESGA++ +A Q + L+ +G +LG+ FQ DD+LD
Sbjct: 170 ADKKTASLFSASAESGALVGNADQKYVKALQQYGRSLGLAFQARDDILDFTG 221
>gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC
27126]
Length = 324
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 1 MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ L ++ + ++ ++ + + + Y + GGK++R L
Sbjct: 1 MDIDQIRALSNDDMQAVNQLIQQQVDSDVALINQLGF--------YIVNSGGKRLRPLLT 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A +++ + A +E IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 53 VLSARAMGIDNNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETANAIFGNQASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L T +F+++ S K I S+ + LQ M + + F
Sbjct: 111 VGDFLYTRSFQMMVSLKRMRVMEILSEATNQIAEGEVLQLMNCNDPSTTE------ARYF 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A + A++ +++ + ++ +G++LG FQLADD+LD D
Sbjct: 165 DVIYGKTARLFEAATQLAAVLTDQNEHIEHAMQEYGKHLGTAFQLADDILDYMADSE 221
>gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
Length = 334
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 14 IQQDLKDEVAQLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 66
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ N + +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 67 FDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 124
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I+ + I K K
Sbjct: 125 SQSFKLMVA-----SGSIKAMNVLAKASAIISEGEVVQLVKLNERRLINIEEYQQIVKSK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L +C GAI+A+ S + + + FG+ LG IFQ+ DDLLD
Sbjct: 180 TAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDYLG 227
>gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
Length = 351
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASL--FNVNHLTA-----------LRVGAA 78
+ + L A RYA+ GGK++R LV + +H R A
Sbjct: 71 SSLPEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKIQMLFRAMMA 130
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP MD+ +RRG+PT HI Y E A++AG+ L + AFE++ +
Sbjct: 131 VELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKN 190
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESG 196
+ L+ + + M+ GQMLDI+ E + ++ I + KTGAL+ A G
Sbjct: 191 SADDAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMG 250
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AI A + L+ + +G+ FQ+ DD+LD D L K
Sbjct: 251 AICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 293
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
L++ +RI L L + + L SA+ +A+ LGGK++R L ASL N
Sbjct: 12 LKQAQQRIQQDLLTTLAAFS------IPEPLKSAVHHAVMLGGKRVRPALCYATASLQSN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQ 181
AFE++ + + L M+ GQ L + + I + ++ I
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIH 185
Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ A GA I + Q +LR +G+ +G+ FQ+ DD+LD
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQTIGLAFQVLDDILDIISSTE 240
>gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase
gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
Length = 323
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 87/221 (39%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+D L LL + + L +A + GGK++R +V + ++
Sbjct: 9 APVDQDL-RLLTDNLKRLVGARHPILGAAAEHLFEAGGKRVRPAIVLLVSRATLLDQELT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 ARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ LQ + KT +L+
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDL------ETYLEKSYFKTASLIAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +++ A ++ + L +G++LG+ FQ+ DD+LD
Sbjct: 182 SAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTS 222
>gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII]
gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+]
gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
32953]
gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
31758]
gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 323
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A N
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALNYQGS 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ + S+ + LQ M + I E + KT L
Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNC------NNPDITEESYMQVIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S AI++ AS+ ++ L+ +G LG FQL DDLLD + L K
Sbjct: 177 AAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGK 225
>gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 324
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 13/235 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+ + L + + + L +R+ L GGK +R L
Sbjct: 2 TDLKSIYTPVSADLATVEAEFTGLADQWREEFPELHDMLRHILTGGKVLRPALTFLAGRC 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + L + A E +H +L+HDD ++D+ RRG TV+ + AI+ G+ L
Sbjct: 62 IDESTDRILNMATANELLHISTLVHDD--AIDHAATRRGHQTVNNVWGLEKAILLGDFLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E ++ + S + ++ Q ++ + K
Sbjct: 120 ARAGEYAAATDNLRTVKMFSNTLQTIAVGELRQAKDVFSPAQSREGYFKR------IAGK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T +L+ + ESGA++ ++ + + L FG NLG+ FQ+ DD+LD +L K
Sbjct: 174 TASLLKMSTESGAVLGSGTEEQIQALADFGWNLGMAFQIVDDILDFTGTEAELGK 228
>gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
Length = 313
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 8 MN---KQVIDKYTQRHELYLEQLLNEII-----IPAPQIRSALHYALFSGGKRIRPILVY 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 60 LAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 119
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ ++ L + L + G+ GM+ GQ LD+ +
Sbjct: 120 GDGMQALAIEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEE 179
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K LR +G+++G++FQ+ DD LD
Sbjct: 180 QLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 237
>gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
Length = 323
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + K +D ++ L + + + S GGK++R L
Sbjct: 1 MDLNAIRELAETDMKAVDQLIYQQLESDVALINQLAFYIIKS-------GGKRLRPLLTV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L++ A +E IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LACRAMGYEGDKHLKLAAIVEFIHTASLLHDDV--VDESLLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M + ++
Sbjct: 112 GDFLYTRSFQMMTELDSLHVLKVLANTTNVLAEGEVLQLMNCNDPNTTEANYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L A ++A AS E+ L +G+ LG FQL DDLLD +L K
Sbjct: 166 VIYCKTAKLFEAATLLAGVLAGASVAEQIALGEYGKFLGTAFQLTDDLLDYTASSDELGK 225
>gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
ATCC 7061]
gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
ATCC 7061]
Length = 320
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ S L + I+ L+ + + L A + L GGK+IR V
Sbjct: 5 AMISFLNHDIDIIEKELEQTVRSDYA--------LLSEAGLHLLQAGGKRIRPVFVLLSG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+
Sbjct: 57 MFGDYDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + E ++ + I S++++ L Q D + + K
Sbjct: 115 MFARSLEYMTKINHPMAHEILSKMVVELCLGEIEQV------KDKYNMDQNLRTYLRRIK 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +C+ GAI A + + L FG +G+ +Q+ DD+LD +L K
Sbjct: 169 RKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225
>gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ ++ + N + S GGK++R L AS+F
Sbjct: 47 DMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASMFGYEGDN 99
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF ++
Sbjct: 100 HIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMM 157
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S + LQ ++ E + + KT AL
Sbjct: 158 VDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALFAA 211
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A + + L+ +G NLG+ FQL DD+LD DL K
Sbjct: 212 AAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGK 259
>gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
Length = 319
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 20/240 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L L+ + R + L +L+ ++ +D + GGK+IR LV
Sbjct: 1 MNAETLTLDLETSLGRFEARLRELVDSDVEFIRLIQDDLV-------TAGGKRIRPRLVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + A+E +H +L+HDDL +D+ RRG+ +Y ++++
Sbjct: 54 LASRALGGVPREME-LALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLS 110
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ +++ + + + L Q + + +
Sbjct: 111 GDYLLSRVLYLLAETGRLELVRLFADVARQLAEGEVFQFQVAALGEYSKANY------ER 164
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I KT ALM E A++A A+ +E LR FG G++FQ+ DD LD D L K
Sbjct: 165 IIAGKTAALMRACTEGVALLADAAPMVREALRRFGYEYGMVFQMRDDYLDLMGDGQVLGK 224
>gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Haloquadratum walsbyi DSM 16790]
gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
[Haloquadratum walsbyi DSM 16790]
Length = 271
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L+ ++ + + AL GGK++R + A+
Sbjct: 2 VEDRLESVVDAIDPAVLSD------EVAHVALSGGKRVRPAVTILACEACGGAPEDAVDF 55
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SL+ DD+ +D +RRG + + A+IA +GLL AF +++
Sbjct: 56 AVAVELVHNASLVVDDI--IDRSDVRRGTESAWSAFGHGPALIASDGLLGEAFALLA--- 110
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + + G+ ++ +E + + + KTGAL + E
Sbjct: 111 --------ADEHATEIVAESMVELGEGEATELVARPTNEAEYMQLARRKTGALFRASAEV 162
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GA+ A + + E +G+ FQ+ DD+LD DL K
Sbjct: 163 GAVAGGADPFTIDLFGEYAERVGVAFQIRDDVLDATADATDLGK 206
>gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ ++ + N + S GGK++R L AS+F
Sbjct: 47 DMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASMFGYEGDN 99
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF ++
Sbjct: 100 HIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMM 157
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S + LQ ++ E + + KT AL
Sbjct: 158 VDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALFAA 211
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A + + L+ +G NLG+ FQL DD+LD DL K
Sbjct: 212 AAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGK 259
>gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
Length = 360
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ KR++ I+ + + + + A GGK++R L A L
Sbjct: 47 DLKRVNEIIVERMHSPIALIPQL-------AGHIIAAGGKRLRPLLTLASARLCGYEGER 99
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ A +E IH +L+HDD+ +D +RRG+ + + + +++ G+ L + +FE++
Sbjct: 100 HAQLAACVEFIHTATLLHDDV--VDESLLRRGRDSANALWGNKASVLVGDFLFSRSFELM 157
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
I S + Q + D E Q + + KT L
Sbjct: 158 VEDGVLKVLGILSHASRVIAEGEVAQLI------TANDMATTEAQYLEVIRGKTAQLFAA 211
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AC GA++A + E+E L +G LGI FQL DD LD DL K
Sbjct: 212 ACRIGAVVAERPEAEEEALDTYGMTLGIAFQLVDDYLDYSARQQDLGK 259
>gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
Length = 325
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 13/231 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL---F 65
S ++ L + + + T+H L +A + GGK+IR LV + +
Sbjct: 7 ANWSALVEDDLSQMTRNLKNLLGTKHP-VLYAAAEHLFNAGGKRIRPALVLLVSRATAAY 65
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
R+ E IH SL+HDD+ +D +RRG TV+ ++ A++AG+ L
Sbjct: 66 GEPTERHRRLAEITEMIHTASLVHDDV--IDTSAVRRGIDTVNSRFGNRVAVLAGDYLFG 123
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A ++ + + ++ LQ L Q KT
Sbjct: 124 MASAYLARLGSLEVVELLGIVISHFGEGELLQSTLQFDSDLTF------EQYIDKSFYKT 177
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+LM + A+++ + E L +G +LGI FQ+ DDLLD K
Sbjct: 178 ASLMAGTSRAAAVLSESPAAVCEALYEYGRHLGIAFQVIDDLLDFTGSTAK 228
>gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
Length = 332
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ L + Q D ++SA GGK++R LV ++ A
Sbjct: 30 LIRRRLSSDVVLIN-QIADHIISA------GGKRLRPMLVMLAGHAVGHAGPDHHQLAAI 82
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++ +
Sbjct: 83 IEFIHTSTLLHDDV--VDESNLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVELERMP 140
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I + + LQ + + + DET + + KT L GA+
Sbjct: 141 VMQILADATNRIAEGEVLQLLH------VHNPDTDETAYLRVIERKTAVLFAAGTRLGAL 194
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + ++ L +G +LG FQ+ADD+LD +L K
Sbjct: 195 ASGVDEATQQALFDYGMHLGYAFQIADDVLDYSANADELGK 235
>gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13]
Length = 320
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ S L + + I+ L+ + + L A + L GGK+IR V A
Sbjct: 6 MYSFLNNDLQIIENELEATIQTERA--------LLQEASLHLLQAGGKRIRPVFVLLAAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + V A+E +H SL+HDD+ +D+ +RRGK T+ ++D A+ G+ +
Sbjct: 58 LGAYDIHKVKNVAVALELMHMASLVHDDV--IDDAELRRGKSTIKAKWDNRIAMYTGDYI 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E+++ + I S ++ L Q D + + K
Sbjct: 116 FARSLEMMTKVEDIEAHRILSNTLVELCKGEIEQI------RDKYNYDQNLRTYLRRIKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GAI + + + L FG +G+ FQ+ DD+LD
Sbjct: 170 KTAILIAVSCQLGAITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTSTEE 221
>gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
str. F0295]
gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
str. F0295]
Length = 325
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 12/231 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
L I T L D + + T + L A+ + GGK++R L+ F
Sbjct: 4 LSTIRTPIYTELQDFIALFDKSL-THEDGLLGQALEHVRAKGGKRMRPILILLMTKSFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+ A
Sbjct: 63 VTPVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I+ ++L +L++ LQ +I + E F + + KT A
Sbjct: 121 LLNIARTDDCDIVCDLAELGRTLSNGEILQL------TNIVNTNFSEEVYFEVIRQKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
L GA A + E R FG N+GIIFQ+ DD+ D DL K
Sbjct: 175 LFESCAVIGAKAGGADKQAVEAARAFGRNVGIIFQIRDDIFDYYQSADLGK 225
>gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
Length = 294
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
DL + H + A+RYA GGK +R FLV E A L + A AIE
Sbjct: 18 RDLAQAQIEAALSAHKGPVAEAMRYACTGGKGLRGFLVIESARLHGIAPGMAAPAAGAIE 77
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H YSL+HDDLP MD+ +RRG+PTVH ++DE TA++AG+ L T FE+I +
Sbjct: 78 ALHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIGHLPCSAEA 137
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAI 198
+ L+ +G + + + ++ +Q KTGAL+ ++ +G
Sbjct: 138 RLSLMTSLAGAAGVGGMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAMAGPR 197
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MA A L + ++LG+ FQ+ADD+LD E D
Sbjct: 198 MAGAD---ATALGQYAKHLGLAFQIADDILDVEGDAE 231
>gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
400]
gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
400]
Length = 323
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARTVDYQGEHHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M + ++
Sbjct: 112 GDFLYTRSFQMMTELENMKVLQVLAHTTNVLAEGEVLQLMNCNDPDTTEANYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L A + ++A+ S +++ L +G+ LG FQL DDLLD +L K
Sbjct: 166 VIYCKTAKLFEAATQLAGVLANVSPEQEQALADYGKYLGTAFQLTDDLLDYTANADELGK 225
>gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603]
gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603]
Length = 292
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ ++ + I+ L + + + N L ++ Y+L GGK+IR L+
Sbjct: 1 MKLQMNDLINEINDALKKSIPE------STLNTNLEESMLYSLNAGGKRIRPVLLLLTLD 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ N ++ ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ L
Sbjct: 55 MLNEDYRQGMQSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDAL 114
Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LT AFE++S ++ L+ + +D+ ID + + I +
Sbjct: 115 LTKAFELVSYDSALCDAKKVKVLQRLAYASGHLGMVGGQTLDMQSEDKKIDISTLESIHR 174
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KTGAL+ FA S +A ++ L F ++LG++FQ+ DDLLD D L KK
Sbjct: 175 TKTGALLTFAIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 232
>gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKILEVMSEAVNVIAEGEVLQLM------NVNDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + ++A S +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQCSGLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSDGETLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
18603]
gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
18603]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+ E + I +D + + MQ+ L Y + GK+IR + ASL
Sbjct: 3 SIDEIKRPIAAEIDVFEEKFKTSMQSSVP-LLDRITHYIVKRKGKQIRPMFLFLSASLCG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + R A +E +H +L+HDD+ +DN Y RRG +++ + A++ G+ LL+
Sbjct: 62 GINESTHRGAALVELLHTATLVHDDV--VDNSYQRRGFFSINALWKNKIAVLVGDFLLSK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ I S+ + ++ LQ +M + + D + + KT
Sbjct: 120 GLLLSIENNDFHLLKIVSEAVRQMSEGELLQIEKVRRMDIDEPVYYD------VIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
+L+ C GA + A E++R FGE +GI FQ+ DD+ D +D+ K
Sbjct: 174 SLIASCCACGAASSGADDATVEKMRLFGEKIGIAFQIKDDMFDFGTDDVGK 224
>gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
98-5489]
gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
98-5489]
Length = 288
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLF 65
+++N + I + L+ A + + H L + GGK+ R L+ +
Sbjct: 1 MRKNLQSIFGEFETYLISQAPKVPSFHPYFEKALWEMVE---NGGKRFRPKLLLSIVDAY 57
Query: 66 NVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E +H YSLIHDDLP+MDN +RRG T+H +YDE AI+ G+ L
Sbjct: 58 KPKSIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTLHCKYDECGAILIGDALN 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T++F I++ K + K + +LS I + + + + + I K
Sbjct: 118 THSFYCIATSKLKPKIKNKLIKILSYNGGIYGMVLGQALDCYFEKQTLPLKDLRTIHLNK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L+ + + G I+A + + L G +LG+ FQ+ DD++D +
Sbjct: 178 TAKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRDDIIDATQ 225
>gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
Length = 296
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN +++N + +D +D+L ++ N L ++Y++ GGK++R ++
Sbjct: 1 MNSNFDDFVKQNVELLDQHIDELFDSDSTL-----NTDLKMMMKYSIDAGGKRVRPLVLL 55
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F + V AA+E +H YSLIHDDLP+MDN +RRG+PT H ++ E AI+
Sbjct: 56 AILKAFGKTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LLT AF+ ISS + + L L+ + ++
Sbjct: 116 AGDALLTVAFQWISSTNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAELK 175
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTG ++ F E+ IM + E ++ F N G+ FQ+ DD++D E
Sbjct: 176 HLHHLKTGKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTESTA 232
>gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 336
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 15/225 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ + + + N + S GGK++R L A L
Sbjct: 25 DMERVNQTILSRAASDVTMIPEVANHLISS-------GGKRLRPMLTLAAAGLCGYGGNG 77
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ A++E +H +L+HDD+ +D +RRGK + + +++ G+ LL AF+++
Sbjct: 78 HIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFKMM 135
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + S + +Q + + + KT AL
Sbjct: 136 VEVGSLACLEVLSTAAAVIAEGEVMQLAAAKDTETGE------DDYLAVIRAKTAALFGA 189
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A E GA++A + E R +G NLGI FQL DD LD K
Sbjct: 190 AAEVGALLAERPKAEIAACRSYGLNLGIAFQLIDDALDYGGTSAK 234
>gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 322
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
++++ +D + L + N A GGK++R +V +
Sbjct: 8 TDDIKQDMDSVDNYIKRALKTHQRLLSDVINQL-------AGSGGKRLRPLMVILSSRFG 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + AAIE +H +L+HDD+ +D+ IRRG+PTV ++ + A+ G+ L +
Sbjct: 61 GYKRDEIIHLAAAIEILHMATLVHDDI--IDDAPIRRGEPTVQSRWGKDVAVFTGDFLFS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
F ++S + S+++ + Q + + + KT
Sbjct: 119 TVFSLLSKEVSFDDLYEVSRVVKQICEGE------VDQYQHRYNTAVSVRSYLRRIRHKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L +C GA A S+ L FG + G++FQ+ DD+LD E +L K
Sbjct: 173 ADLFALSCVIGAKRAGCSKPIYNALENFGMDFGMVFQIIDDILDFEGQQEELGK 226
>gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 794
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 7/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA- 62
+ I++ L + Q + Q + L+ Y L G GK++R L
Sbjct: 504 FSNTFATVRDEINSQLQ--IKQPSDTPPMQVS--LIDTANYTLEGDGKRLRPILTWVMGV 559
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + + ++E +H SLI DDLPS DN RRG+PT+H ++ TA I G
Sbjct: 560 NEYGLEPSAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHNSATAEITGLY 619
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L+ A E SS ++ S + S G M LD + + + Q+ MI
Sbjct: 620 LIQKAIEEQSSLVGFDASSVVSLIQYSSKRA-GEMCMGQAMDLDSKGKKLTLEQLNMICF 678
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG + AI+A ++ E L+ F + GI FQ+ DDLLD + DL
Sbjct: 679 YKTGIAFEASLVMPAILAQVNEAEIALLKKFAYHAGIAFQIKDDLLDVQGDLE 731
>gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes HCC23]
gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes HCC23]
gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes L99]
Length = 321
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 APNADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22]
gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22]
Length = 286
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+++ + L L + D L ++ GGK+ R L+
Sbjct: 1 MKDLLNSFEDYLLKNLP-ISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSL 56
Query: 69 HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + V +E +H YSLIHDDLP+MDN +RRG T+H +YDEVTAI+ G+ L T A
Sbjct: 57 LVSNAMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I++ + L+ I + + + I Q+ + KT
Sbjct: 117 FNLIANASLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTAR 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L+ + + GAI++ +E+L FG +LG++FQ+ DD++D
Sbjct: 177 LIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIID 218
>gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 330
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPISEDMQQVNRVIRQRLASDVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGDTTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I ++ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILAEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADTKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAE 229
>gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
LLAP12]
gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
LLAP12]
Length = 322
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDR-LLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALR 74
++DD A + + L+ + + + GGK++R LV ++ + +
Sbjct: 9 AVIDDFNAVNALIVNKIESQIGLIDDMSHHVIESGGKRLRPLLVLLASNACSYQGNAHIA 68
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A +E H +L+HDD+ +D +RRG+ T + + +I+ G+ L T + E++
Sbjct: 69 LAAMVEFFHTATLLHDDV--VDESTLRRGRETANNIWGSKASILVGDYLFTQSIELMVDS 126
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L ++ Q + + + + F + + KT L A
Sbjct: 127 GNPAILKLFANTALEISCGEVKQL------SNRHNPALTFEEYFDVIRAKTALLFAAAAC 180
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G +++ AS+ ++ L +G +LG FQL DD LD D
Sbjct: 181 IGPMLSDASKEVQDSLYAYGLHLGNAFQLIDDALDYCSDAK 221
>gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905]
gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905]
Length = 321
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S L+ + I+ L++ + ++ + +++ GGK+IR V A
Sbjct: 6 LYSDLKSDIDIIERELENAVDSSSYLIND-------ASLHLLQAGGKRIRPIFVLLGAKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ +
Sbjct: 59 GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E I+ + L I ++ M+ + + +Q ++ ++ K K
Sbjct: 117 ARALEYITKIEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRR------IKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K
Sbjct: 171 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 225
>gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
Length = 358
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++++ ++ + N + S GGK++R L AS+F
Sbjct: 45 RADMEQVNQLILSRAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASMFGYEG 97
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF
Sbjct: 98 DHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFR 155
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 156 MMVDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALF 209
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A + + L+ +G NLG+ FQL DD+LD DL K
Sbjct: 210 AAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGK 259
>gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G + +++ E + D L L ++ Y + GGK++R L
Sbjct: 29 GQVKARVLELAAPADEALGQTLSCHVPFIK--------EVSDYIIFSGGKRLRPVLFMLA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A +D +RRG+P Y I+ G+
Sbjct: 81 AQAVGGAGDFRRAAIFEYLHAATLL----HDDVIDEAGLRRGRPAARKLYGNEAVILVGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ + + + + L+ + + + + +
Sbjct: 137 FLFSKSYSLAAEEPDHRFIQALTDCTTHMAEGQVLELLRTDDLELSRQ------KYLEVI 190
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ AC+ GAI A AS + L +G +LG+ FQL DD LD
Sbjct: 191 VAKTAVLLAAACQMGAIHAGASPEVENALYRYGLSLGVAFQLVDDALDYVG 241
>gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 335
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN---VNHLTA 72
+D+++ + L + Q + ++SA GGK++R LV
Sbjct: 27 VDSLIRNRLASDVVLIN-QIAEHIVSA------GGKRLRPMLVVLAGQATATSLGTTADH 79
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F+++
Sbjct: 80 HQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANAIWGNAASVLVGDFLYSRSFQLMV 137
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I + + LQ + + + + KT L
Sbjct: 138 ELDRMEVMQILADTTNRIAEGEVLQLLHVRNPDTDE------AAYLRVIERKTAVLFAAG 191
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
GA+ + A + ++ L +G LG FQ+ADD+LD DL K
Sbjct: 192 TRLGALASCADADTQQALYDYGMALGYAFQIADDVLDYTADAADLGK 238
>gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
Length = 289
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ I+ + Q + L+ AI Y++ GGK+IR + E F +
Sbjct: 2 DKLNEINQAIRRYYAQ-----SDVVSPDLIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 57 TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ +R LS + ++ ++ +++ +I KTG L
Sbjct: 117 GLVADTALSADIKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHTNKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ F + I+A+ + N+ + LR G +G+ FQ+ DD+LD
Sbjct: 177 LTFPVVAAGIVANLAANDLKSLREAGSLVGLAFQVRDDILDVTA 220
>gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 334
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 21/243 (8%)
Query: 1 MNGGLPS-KLQENSKRI-------DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKK 52
M + + +L + I D ++ L + + Q + ++ A GGK+
Sbjct: 1 MTSTVKTNELSQILAPISLEFKGLDEVIRLRLASKVALI-DQISTYIIQA------GGKR 53
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+R L+ A +A + A ++ +D +RRG+ T + +
Sbjct: 54 VRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATLLHDDVVDESTLRRGRETANAAFG 113
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
+++ G+ L + AF+++ +P I S ++ LQ + +
Sbjct: 114 NAASVLVGDFLYSRAFQMMVAPNDLRVMQILSDATNTIAEGEVLQLLNMNDPEVDE---- 169
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KT L + E GAI+A A+ +++E+ FG ++G FQL DDLLD
Sbjct: 170 --ASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGRHIGTAFQLMDDLLDYTA 227
Query: 233 DLP 235
+
Sbjct: 228 NAA 230
>gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum]
Length = 330
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+++ ++ L + ND + + + GGK++R L+ + + +
Sbjct: 17 EQDLLAVENCLIEY--------GGDTNDYIREVTSHIIQSGGKRLRPLLMIIASRISGYS 68
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D+ +RRGK + + + TA++ G+ L A
Sbjct: 69 GPHISLLSAVVEFIHTATLLHDDV--VDHAEMRRGKLSANQIWGNQTAVLVGDYLYATAL 126
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + ++ + ++ L+ + + E + + KT AL
Sbjct: 127 WMATGVHNHEINDTLTLACRKMSEGEVLELI------LDNNLSAREEDYLSVVECKTAAL 180
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C GAI+ A +K+ L FG N+G+ FQ+ADD LD
Sbjct: 181 TAGTCRIGAILGGADTEKKKALEDFGYNIGMSFQIADDALDYMA 224
>gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 299
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+ + S L+ ++R++ L L + Q +RL+ AIRYALLGG K++R LV
Sbjct: 10 DVDIQSYLRSVTERLEPRLAALADERRG----QGPERLVEAIRYALLGGGKRLRPALVLA 65
Query: 61 CASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ +R A+E +H YSL+HDDLP+MD+ +RRG+PTVH YDE TA+
Sbjct: 66 ACEAHGGDASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAV 125
Query: 118 IAGNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ G+ L + ++++P+ R + G + G+ + +
Sbjct: 126 LVGDALQSLAFRHLLAAPQPTAAALARLLAENAYLMVEGQARDIQGEHARLAEAE----- 180
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ ++ + A A + E + G LG+ FQ+ADDLLD D
Sbjct: 181 ---VLELMRTKTGALLASAVAGGAACAGAAVEAVYPIGLKLGLAFQIADDLLDLTADTQT 237
Query: 234 LPKK 237
L K+
Sbjct: 238 LGKR 241
>gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ ++ + L + + Y + GG K++R L
Sbjct: 1 MDFKAIQALTADDMAIVNETILAQLNSDVALINQLGF--------YIVSGGGKRLRPVLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + ++ +++
Sbjct: 53 ILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAEFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S + ++ S+ + + LQ M +
Sbjct: 111 VGDFIYTRSFQMMTSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ KT L A + GAI+ A Q + L+ +G+ LG FQL DD++D D K
Sbjct: 165 QVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSD-GK 221
>gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355]
Length = 291
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YKSQQVSPDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
Length = 294
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVG 76
++ L Q + T H D + L GGK+ R L+ + + + +
Sbjct: 2 QDFENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVESAMTPA 61
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E H YSLIHDDLP+MD+ +RRG+PT+H ++DE AI+AG+ L T+AFE++S
Sbjct: 62 LALEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEMLSRSAF 121
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I +L+ G + L+ + + QV + KT L+ A E G
Sbjct: 122 RADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNKTAKLIAAALEMG 181
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++ + + L FG +LG++FQ+ DD+LD +
Sbjct: 182 AVIVDLPKETRRALYRFGIDLGLLFQVQDDILDATQSAE 220
>gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
Length = 322
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 87/230 (37%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L I+ L+D + +Q L L GGK++R L A
Sbjct: 2 SDFADILSREVPAINRHLEDATASLSPLVQPVVRHVL-------LAGGKRLRPLLAILVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ ++E +H +L+HDD+ +D +RRG+P+ H ++ I+AG+
Sbjct: 55 RALGHQEDDVYPLACSLEFLHSATLLHDDI--VDGATLRRGRPSAHTRFGATHTILAGDV 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A ++ I S+ +L L+ I
Sbjct: 113 LLALANRTVAEYDDPELTRILSEALLQTATGEILEIAHLRDTDLPL------DTYLSIIT 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ AC GA++A N E + G N GI FQL DD LD
Sbjct: 167 GKTAHLLQAACHCGAVLAGVDANLCEAAKTLGVNCGIAFQLVDDALDYTS 216
>gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 394
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 15/243 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHN------------DRLLSAI-RYALLGGK 51
+P+ L+ + R+ +L++L+ + + L + Y L K
Sbjct: 1 MPAYLEGSRARVVAVLEELIAEQRRRSPGIEDRTEGRLEGDPYGPVLYDLMLDYPLREAK 60
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R L N AL + +E H L+HDD+ +
Sbjct: 61 GLRPALCIATCRALGGNLEAALPTASVLELYHNAFLVHDDVEDRSHVRRGGPTLHAAHGQ 120
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ G LT + + + L +R ++ ++G ++ +
Sbjct: 121 AIAVNVGDGMLALTLRPLLANIERVGLGPALRILEAMAEMSERTVEGQAMELDWIRRNTW 180
Query: 172 I--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
D+ + M+ + GA+ A + E+L F +L + FQ+ DD+L+
Sbjct: 181 ELSDDDYIEMVVRKTGWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQIQDDVLN 240
Query: 230 CEE 232
Sbjct: 241 LVG 243
>gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
Length = 287
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + K+I+ L D + + T + S + GGK++R L F +
Sbjct: 2 IHDYQKQINQYLSDHVENECAE-PTLATSTIYSLM----AGGKRLRPALTLAICDAFQQS 56
Query: 69 HLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A+E +H YSLIHDDLP+MDN +RRG PT H ++ A +AG+GLLT A
Sbjct: 57 INQDVLRASCAVELLHTYSLIHDDLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTLA 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+ +S + L+ + + + + ++ + KTGA
Sbjct: 117 FQWLSDNNLATTTRLSLVRELATAAGPAGMVAGQAMDIHNEGHHLALPDLQLLHEKKTGA 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ +A +G I+ + + K L FGE G+ FQ+ DDL+D
Sbjct: 177 LIRYAVLAGGIITNQAPETKHLLARFGEYYGLAFQIYDDLMDVVGSEA 224
>gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
Length = 336
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ + + + N + S GGK++R L A
Sbjct: 16 DQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L +++ A++E +H +L+HDD+ +D +RRG+ + + + +++ G+
Sbjct: 69 NLAGYAGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGRLSARMVWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G ++ + E+ FG NLGI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPVLGGRPKAEQTAAASFGMNLGIAFQLVDDVLDYGGKSAK 234
>gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
Y25]
gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
Y25]
Length = 290
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L +++ + + ++ L A+ + SA+ YA GGK +R FLV E A
Sbjct: 3 SLSTRMAAAAADVQALIAAHLSPLAA------ASPVASAMIYACTGGKGLRGFLVLESAR 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + AL V AA+E +H YSL+HDD+P+MD+ +RRG+PTVH Q+DE TA++AG+ L
Sbjct: 57 LHGIAYADALPVAAAVEAVHAYSLVHDDMPAMDDDDLRRGRPTVHRQWDEATALLAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ FE+I++ + + + + G + + Q+ +Q
Sbjct: 117 QSLGFELIATAALPDSARVTLLAGFARAAGIHGMVGGQEADIAAETAARPLSLDQIIALQ 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ ++ +GA+MA A LR FG+ +G+ FQ+ DD+LD E
Sbjct: 177 RGKTGALITWSASAGAVMAGAD---AAPLRAFGDAIGLAFQITDDILDVEGSAA 227
>gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TMA 21]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
Length = 298
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 9/225 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N + + ++ L LL S RL A+RY+ L GGK++R LV
Sbjct: 3 NDNFIGWMTGIQQTMEDALARLLPNPESA-----PQRLHEAMRYSTLDGGKRVRPLLVHA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + N R+GAA+E IH YSL+HDD+P MD+ +RRGKPT H+ +D+ TA++ G
Sbjct: 58 AGELVSANPEHLARIGAAVEMIHAYSLVHDDMPCMDDDVLRRGKPTCHVAFDDATALLVG 117
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
+ L T AF+++++P + + +++ +L G GM GGQ +D + + ++
Sbjct: 118 DALQTLAFDVLATPLDGVAAAAQLEMVRTLARASGHGGMAGGQAIDLASVGQTLSLPELE 177
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222
+ +KTGAL+ A GA+ S E ERL F + +G+ FQ
Sbjct: 178 YMHCLKTGALIRAAVLLGALAGTPLSAEETERLDHFAKRIGLAFQ 222
>gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae bv. albensis VL426]
gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087]
Length = 291
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVKAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby]
gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby]
gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
Length = 298
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 1 MN---KQVIDKYTQRHELYLEQLLNEII-----IPAPKIRSALHYALFSGGKRIRPILVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 53 LAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 112
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ +++ L + L + G+ GM+ GQ LD+ +
Sbjct: 113 GDGMQALAIEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEE 172
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K LR +G+++G++FQ+ DD LD
Sbjct: 173 QLREIHLLKTGKLILACFEMVLAAQNEISEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230
>gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
C58]
gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
C58]
Length = 338
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +R++ ++ + N + S GGK++R L AS+F
Sbjct: 27 DMERVNQLILSRAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASMFGYEGDN 79
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF ++
Sbjct: 80 HIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQAFRMM 137
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S + LQ ++ E + + KT AL
Sbjct: 138 VDVGSLDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLQVIRAKTAALFAA 191
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A + + L+ +G NLG+ FQL DD+LD DL K
Sbjct: 192 AAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVLDYGGKSADLGK 239
>gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1]
gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
Length = 322
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANAMWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A +A A+ + E LR FG++LG+ FQL DDLLD + D
Sbjct: 170 KTAMLFEASTHSAAALAGATAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAE 221
>gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
Length = 324
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 39/270 (14%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M + S L+ + D L+ LL T + A+R++ GGK++R L
Sbjct: 1 MTIDVQSILKTGAAITDAALERLLPA-----ATIEPYSIHRAMRHSTFAGGKRLRPILCM 55
Query: 60 ECASL-------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
E A + + + AA+E +H YSLIHDDLP++DN +RRG+PT
Sbjct: 56 EAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSLIHDDLPALDNDDLRRGQPT 115
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM----------LSLTHNIGL 156
H+ + E TAI+AG+ L T AF+ I+S + + H+ G+
Sbjct: 116 CHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAILRKISLSIGTGIGRWGDHDTGI 175
Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMA----HASQNEKER 209
+ G + + + I + KTGAL+ + +GAI + ER
Sbjct: 176 APGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSIVAGAIYGSSRHGLPSSYHER 235
Query: 210 LRCFGENLGIIFQLADDLLDCEE---DLPK 236
+R FGE G+ FQ+ DD+LD + +L K
Sbjct: 236 IRTFGEKAGLAFQIVDDVLDMTQSSEELGK 265
>gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
Length = 309
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLT 71
++ IL+ + + + Y +LGGK++R L+ A
Sbjct: 1 MAAVEEILNREMSSRYESVN--------EVVSYGCMLGGKRMRPALLLLAAKACGQVTDA 52
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+GA IE IH +L+HDD+ +D RR TV+ +++ T+++ G+ L ++AF +
Sbjct: 53 HYTLGAVIEMIHTATLVHDDV--LDEADQRRHLATVNSRWNNETSVLLGDFLFSHAFYLA 110
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ T + + + Q+ Q E + I KT L
Sbjct: 111 TMLPTTCAARMIGRSTNIVCEGE------LRQIASRQAFETTEEEYLAIIDAKTAELCAC 164
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-----------DLPKK 237
ACE GA A AS+ + L FG +LGI FQ+ADDLLD E DL K+
Sbjct: 165 ACELGARYAEASEEQIAALEKFGRDLGIAFQIADDLLDVEGNEVETGKSLGTDLEKQ 221
>gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella
multacida DSM 20544]
gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella
multacida DSM 20544]
Length = 319
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 9/217 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAI 79
++L Q T N+ + + GGK+IR L A + L + A+
Sbjct: 10 EILEQGLQEAVTSTNELVTEVGMHLVTSGGKRIRPALCLLSARGGKAFDLPHVLPLAEAL 69
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH SL+HDD+ +D RRG T + +++ AI++G+ + AF +++
Sbjct: 70 ELIHTASLVHDDV--IDEADTRRGAATANARWNNQVAILSGDYIFARAFALLAE-----A 122
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
L L Q I F + KT + CE G ++
Sbjct: 123 GYGDYVLKRLAELVCNLSVGEIIQDHAIYQASRGMADYFERIQKKTADFLEICCELGGLV 182
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ E +L +G +G+ FQ+ DDLLD E+ K
Sbjct: 183 GGMDREEAGKLAEYGHCIGMAFQITDDLLDIEQTTEK 219
>gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
Length = 348
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 26/249 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-L 64
++E + ++ LD+ + +RL A RY L GGK++R + A L
Sbjct: 12 EAIRERRELVNDALDE-------DVPMAEPERLYEASRYLLKAGGKRLRPTVSLLTAESL 64
Query: 65 FNVNHLTALRVGAAIECI-------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+V ++ S MD+ +RRG P VH +Y
Sbjct: 65 ADVEPMSEDYRAFPTLAGDPIDVMVAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHKEY 124
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
D TAI+AG+ L AFE+++ D + + L+ T +G + + E
Sbjct: 125 DNSTAILAGDTLYAKAFELLTKTGADPADGLEAVRRLATTCTQICEGQALDIEFERRTEV 184
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + ++KT L A A++ A E L +G G FQ+ DD+LD
Sbjct: 185 LP-DEYLQMVELKTAVLYGTAAAVPAVVMGADDEVVEALYQYGIASGSAFQIQDDVLDLT 243
Query: 232 --ED-LPKK 237
D L K+
Sbjct: 244 VPSDQLGKQ 252
>gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
Length = 323
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 18/235 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ ++ + L + + Y + GG K++R L
Sbjct: 1 MDFKAIQALTADDMAIVNETILAQLNSDVALINQLGF--------YIVSGGGKRLRPVLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + ++ +++
Sbjct: 53 ILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAEFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S + ++ S+ + + LQ M +
Sbjct: 111 VGDFIYTRSFQMMTSLGSIKILSLMSEAVNVIAEGEVLQLMNCNDPNTTE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ A Q + L+ +G+ LG FQL DD++D D
Sbjct: 165 QVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
Length = 324
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL+ K I+ L + + +++ L + Y GK +R LV A L+
Sbjct: 3 KLEVIKKPIEKELSEFKALFDASLKSSTP-LLDEVLGYIKQRNGKMMRPILVLLMAKLYG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + L ++E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L
Sbjct: 62 GINDSTLHAALSLELLHTASLVHDDV--VDESNKRRGQSSVNALYDNKVSVLVGDYMLAT 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ S + ++L L+ +Q + E F + + KT
Sbjct: 120 SLRHASYTNHIELVGLVARLGQDLSEGEIIQLVNISNRD------FSEEIYFDVIRKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
AL + ESGAI +A ++E E+ FGE +GI FQ+ DD+ D E+L K
Sbjct: 174 ALFTASAESGAISVNAPKDEVEKAVLFGEMIGIAFQIKDDIFDYFDNEELGK 225
>gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 336
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + Q ++ L + + T L+ A GGK+ R LV
Sbjct: 13 DRTLEADTQAGLTAVEEGLLEATKSDVPFI-TGAAQHLMRA------GGKRFRPLLVLLA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E H +L HDD+ MD +RRG + + ++ A++ G+
Sbjct: 66 AQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVASANARWGNSVAVLTGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + +T I + +D +
Sbjct: 124 FLFARASHILADLGPEAVRIQAEAFERLVTGQI-------LETAGPRDGQDPIEHYLDVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KTG+L+ + GA+M+ A ++ L +GE LGI FQLADD+LD D
Sbjct: 177 QGKTGSLVAVSGRFGAMMSGADESVVSILTQYGERLGIAFQLADDVLDIASDS 229
>gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis]
gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase
gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L L + T+H L +A ++ GGK++R LV A +
Sbjct: 11 VEQELCSLEKNLKAVAGTRHP-ILYAAAKHLFDAGGKRVRPALVFLVAKATSEKQDINTG 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D RRG TVH ++ A++AG+ L + +++
Sbjct: 70 QKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ QG++ D +I+++ KT +L+ +C
Sbjct: 130 IENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEKS------FYKTASLIAASC 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A++ ++ L +G+++G+ FQ+ DD+LD L K
Sbjct: 184 RGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGK 229
>gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
Length = 286
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
MN + EN ++ + + + + L +I Y+L+ GKKIR
Sbjct: 1 MNS-FEQFINENRNSLNIYAKEYIENL------EIPELLKESIIYSLVNDGKKIRPLSFL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+N+++ V AIE +H YSL+HDDLP MDN R GKPT H Y + A++
Sbjct: 54 YLLKFYNIDYKEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKPTNHRVYGQDIAVLT 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +LT AFE++S + + + ++ +D + +
Sbjct: 114 GDSMLTLAFEVLSKSNINDTLKVNLIQQFANYSGAMGMIAGQVYDVKQKNYQVDANYLKL 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KTG L+ + +A +++ + +R FG+ LGI +Q+ DD+LD + K
Sbjct: 174 MHSLKTGRLIELPLDFACKIARK-ESDLDYIRSFGKELGIAYQIKDDILDYYGEFEK 229
>gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408]
Length = 291
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL F2-208]
Length = 324
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 63 APNADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus MB-451]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
35316]
gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
35316]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLDKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ D I E
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLM------NVNDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+ + +++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQCSGILGGCTDVQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 322
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDGIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANAMWGNAPSVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +FE++ + I SQ + LQ ++D E + +
Sbjct: 116 YSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQL------SKVRDASTTEETYMEVIRG 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + S A +A AS + E LR FG++LG+ FQL DDLLD + D
Sbjct: 170 KTAMLFEASTHSAAALAGASAEQSEALRTFGDHLGVAFQLVDDLLDYKGDAE 221
>gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
Length = 298
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++R + L+ LL + ++ SA+ YAL GGK+IR LV
Sbjct: 1 MN---KQVIDKYTQRHELYLEQLLNEIV-----IPAPQIRSALHYALFSGGKRIRPILVY 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L +V+ + AA+E HCYSLIHDDLP+MDN +RRGKP+ H +DE TAI+
Sbjct: 53 LAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILV 112
Query: 120 GNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+G+ ++ L + L + G+ GM+ GQ LD+ +
Sbjct: 113 GDGMQALAIEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEE 172
Query: 179 M---IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KTG L+ E A S+ K LR +G+++G++FQ+ DD LD
Sbjct: 173 QLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230
>gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium
gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
Synthase In Complex With Magnesium And Fpp Analogue
gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus]
Length = 325
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
+ L ++ L + + ++ + A + L GGK++R V L
Sbjct: 7 KAFLNPYIIEVEKRLYECIQS--------DSETINKAAHHILSSGGKRVRPMFVLLSGFL 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +R ++E +H SL+HDD +DN +RRG +VHI +D+ TAI G+ LL
Sbjct: 59 NDTQKDDLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLL 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + I++ I S+ +L + QM D + + T K
Sbjct: 117 ARALQNIATINNSKFHQIFSKTILEVCFGE------FDQMADRFNYPVSFTAYLRRINRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L+ +C GA+ + + ++ FG +G+ +Q+ DD+LD D
Sbjct: 171 TAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEA 221
>gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4206]
gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
EC4206]
Length = 324
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 20/231 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
++ ++ + + L + Y + GG K+IR + A
Sbjct: 12 AQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIAVLAARAVGYE 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF
Sbjct: 64 GNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAF 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++S + + S+ + + LQ M ++ ++ + KT L
Sbjct: 122 QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR------VIYSKTARL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A + I+A + E++ L+ +G LG FQL DDLLD D L K
Sbjct: 176 FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGK 226
>gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1]
gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058]
Length = 291
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
Length = 348
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 289
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 10/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L ++ I LD + M + ++ A+RYA GGK++R FLV E A
Sbjct: 2 SFKDVLLTDAAHIQARLD-------AAMAGLSDQPVVQAMRYATQGGKRLRGFLVLESAR 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ AAIE +H YSL+HDDLP MD+ +RRG PT H+++DE TA++AG+ L
Sbjct: 55 LHGIAAENAVSAAAAIEALHAYSLVHDDLPCMDDDDLRRGLPTCHVKWDEATAVLAGDAL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T AFE++ P + + + + + G + + + + I ++
Sbjct: 115 QTMAFELLCDPALGSEKARLALVASLARASGAAGMVYGQALDIAAETASEPLTLAQITEL 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ G S A + + L F LG+ FQ+ADD+LD E D K+
Sbjct: 175 QAGKTGALISWSAQAGALLAGADPAPLARFATALGLAFQIADDILDVEGDAAVAGKR 231
>gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
3776]
gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
3776]
Length = 338
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ +L Q D L A R+ GK++R LV A + T + A +
Sbjct: 33 VERILWNELESDQPCVKDILQHATRFR---GKRLRPILVLLSARACGEVNETHRLLAAVV 89
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH +L+HDD+ +D RR TV+ +++ T+++ G+ L T+AF + S T
Sbjct: 90 EMIHIATLVHDDV--LDEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLASELPTSHA 147
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + + Q + + ++E F I KT L + GA
Sbjct: 148 CRIIGRATNKVCEGELTQI------HERGNLDLNEETYFKIINGKTAELTAVSAYLGAHY 201
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
A + +G LG+ FQ+ADDLLD + KK
Sbjct: 202 ADQPAEVVNAVEAYGRKLGLAFQIADDLLDILG-VEKK 238
>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter sp. ADP1]
Length = 302
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 15/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
LQ +RI L L + L SA+ + + LGGK++R L AS+ N
Sbjct: 12 LQAAQERIQQDLTTALDAFD------LPEPLKSAVYHTVMLGGKRVRPALCYAVASMEKN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N+ A R A+E IHCYSL HDDLP MDN +RRG+PT H+ + E TA++AG+ L +
Sbjct: 66 PNYAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125
Query: 127 AFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
AFE++ + + +I + M L L + + ID+ Q+ I +
Sbjct: 126 AFEVLGSRLFDQQNSVDASIVLRQMQILATASSKMVCGQVLDLQAEGKEIDQEQLENIHR 185
Query: 183 MKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA + + Q LR FG+ +G+ FQ+ DD+LD
Sbjct: 186 NKTGALIQAALMMGAVTLFSGMDQA-IPHLRQFGQRIGLAFQVQDDILDIISSTE 239
>gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A S +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35243]
gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35243]
Length = 339
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L KL E R++ L + +TA+ T+ L +A GGK++R LV +
Sbjct: 9 DALEEKLTEALSRVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61
Query: 63 SLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L ++ + A + + MD+ +RRG H++++ A++A
Sbjct: 62 QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMA 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A +I S + ++ L + G D D +
Sbjct: 122 GDLIFARAS-LIVSDFGRELMKYHARTFQRLCLGQMHDILGPGATDDPIDFY------LH 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD
Sbjct: 175 VLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225
>gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
33209]
gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
33209]
Length = 375
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
N +++ L + + + + + L+ A GGK+IR LV A L + +
Sbjct: 64 NLAKVEKQLREAIANSDP-LADATSRHLIEA------GGKRIRPLLVLLAAHLGDSSRPE 116
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+R +E H +L HDD+ MD+ RRG PT H + AI+ G+ + A ++
Sbjct: 117 VIRAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAILTGDLIFARASILV 174
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGAL 188
S + + GQ+ + DE V + KTG+L
Sbjct: 175 S----------ELGPRALGIQARTFERLCLGQLHETVGPRPDEDPVDHYISVVSDKTGSL 224
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + GAI A + ++ L +GE +G+ FQLADD++D
Sbjct: 225 VSASGQLGAIFAEVPEPIQDVLVEYGEKVGVAFQLADDVIDVTG 268
>gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
14672]
gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
14672]
Length = 338
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 15/231 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +L E + ++ L + + A L+ GGK++R LV
Sbjct: 17 DPALRDRLAERLRTVERRLQERAARAADPRVAPLVGHLV------TTGGKRLRPLLVLLG 70
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + E +H SL HDD+ +D+ IR G + + ++ A+ AG+
Sbjct: 71 AEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSANARWGNRRAVFAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A + +S + + L L+ + G D + +
Sbjct: 129 WLLAQAAQ-LSCALGPRAVRLNAVTADRLVRGQALELLGPGPGTAPLDHY------LRVT 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
K+ +L+ + + GA+ A A + + L +GE LG+ FQ++DD+LD
Sbjct: 182 AGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITS 232
>gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis
ATCC 14672]
Length = 341
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 15/231 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +L E + ++ L + + A L+ GGK++R LV
Sbjct: 20 DPALRDRLAERLRTVERRLQERAARAADPRVAPLVGHLV------TTGGKRLRPLLVLLG 73
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + E +H SL HDD+ +D+ IR G + + ++ A+ AG+
Sbjct: 74 AEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSANARWGNRRAVFAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A + +S + + L L+ + G D + +
Sbjct: 132 WLLAQAAQ-LSCALGPRAVRLNAVTADRLVRGQALELLGPGPGTAPLDHY------LRVT 184
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
K+ +L+ + + GA+ A A + + L +GE LG+ FQ++DD+LD
Sbjct: 185 AGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITS 235
>gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 88/222 (39%), Gaps = 9/222 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++T L LL + + L +A + GK++R +V + N +
Sbjct: 11 VETDL-QLLTDNLKQLVGARHPILYAAAEHLFSVHGKRVRPAIVLLISRTTMPNQEITPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ + KT +L+ +
Sbjct: 130 LDNLEVVKLLSKVIMDLAEGEIQQGLNRFDTG------MSINAYLEKSYYKTASLVANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ +++ S E L +G+NLG+ FQ+ DD+LD
Sbjct: 184 KAAGLLSGVSAELAEDLYSYGQNLGLAFQIVDDILDFTGSTE 225
>gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
Length = 348
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160]
Length = 291
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
mimicus VM223]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSNHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
Length = 344
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 16/241 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL------------LGGKKIRS 55
+ ++ + +LL + + + + Y L + GK+ R
Sbjct: 1 MNAAISDVERTMQELLARYGARFPALPGALPVYEVLAYHLGWRDERMQPASGVSGKRFRP 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L T AS + A+ + AAIE +H ++LIHDD+ D +RR +PT+ + +
Sbjct: 61 ALCTAIASAVCGDAARAVGIAAAIELLHNFTLIHDDIQ--DRSRLRRHRPTIWALWGDAQ 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-E 174
AI AG+ L + L+ + ++L+ L L +
Sbjct: 119 AINAGDALFVLSQIAALEAAQALEPSRGAELVRRFNETALLIVEGQVLDLSFEQRPEVSV 178
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + KT AL+ ++ +GA++A A RL FG LG+ FQ+ DD L D
Sbjct: 179 NEYLTMIERKTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQIRDDYLGVWGDP 238
Query: 235 P 235
Sbjct: 239 A 239
>gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36]
gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis
SK36]
Length = 291
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YKSQQVSSDLAEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + +I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti]
Length = 338
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ +R++ + + N + S GGK++R L AS+F
Sbjct: 26 SDMERVNQPILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASMFGYEGD 78
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ ++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF +
Sbjct: 79 GHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTFWGNQASVLVGDFLLGQAFRM 136
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ S + LQ ++ E + + KT AL
Sbjct: 137 MVDVGSIDALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYLRVNRAKTAALFA 190
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A E G I+A S+ ++ L+ +G NLG+ FQL DD+LD DL K
Sbjct: 191 AASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGK 239
>gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae 12129(1)]
gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae TM 11079-80]
gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC9]
gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae B33]
gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae BX 330286]
gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae MJ-1236]
gi|255738566|gb|EET93954.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholera CIRS 101]
gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae RC27]
Length = 323
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
Length = 348
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 26 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 78
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 79 LSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 136
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 137 GDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 191 VIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 244
>gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 331
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L + L+ ++ L S GGK++R L + A F + AL
Sbjct: 26 VEERLRESFLRAGDTIKDSCLLLLDS-------GGKRLRPLLTLQSAQCFGPLNSAALDA 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E IH SLIHDD+ +D+ RRG PT++ Q A++AG+ + AF I+++
Sbjct: 79 AVAAELIHMASLIHDDV--IDHSDRRRGIPTINSQRGNQVAVLAGDYVFAEAFRILANKH 136
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + S+ Q D ++ +Q F KTG L+ C S
Sbjct: 137 LLTSMSYLVDAIQSMCDGEVQQAE------QRCDLAVEPSQYFQRIAQKTGILLASCCCS 190
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA A A+Q E L +G NLG +Q+ DD+LD
Sbjct: 191 GAASAGANQKAVEALGQYGMNLGYAYQIIDDILDFTG 227
>gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
Length = 372
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 73/256 (28%), Gaps = 28/256 (10%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLF 65
L++ ++D +L D + + ++ +D L+ A+ L GGK++R+
Sbjct: 9 DLEDVRTQVDAVLADHVERLRRELEPTGDDTLPLVDAVARMLSGGKRLRAAFCWWSWRAH 68
Query: 66 NVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN- 121
T MD RRG P+ H ++ + +
Sbjct: 69 GGVPGTPEAGTVVRVGAALELFQAAALFHDDVMDESDTRRGMPSAHRAFEAMHVERGLSG 128
Query: 122 -------------------GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
++ T R+ L T Q +
Sbjct: 129 DVRQFGMSAAILLGDLALVASEQEFASALADAPTSRARRSRAVYDLMRTEVTVGQYLDVL 188
Query: 163 QMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ D + +I+ + GA +A A R G LG
Sbjct: 189 AQSLPWGDDPDADESRARAVIRAKSARYSVEHPLTLGAALADADDESLAACRQVGLPLGE 248
Query: 220 IFQLADDLLDCEEDLP 235
FQL DDLL D
Sbjct: 249 AFQLRDDLLGVFGDPG 264
>gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 317
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 20/231 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
++ ++ + + L + Y + GG K+IR + A
Sbjct: 5 AQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIAVLAARAVGYQ 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF
Sbjct: 57 GNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAF 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++S + + S+ + + LQ M ++ ++ + KT L
Sbjct: 115 QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR------VIYSKTARL 168
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A + I+A + +++ L+ +G LG FQL DDLLD D L K
Sbjct: 169 FEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGK 219
>gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
Length = 284
Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 15/235 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
R++T L+ L L A+RY+ L GK+ R L A++F+
Sbjct: 2 DFNAYITRVNTKLEKYLP---------VQGYLTKAMRYSTLTNGKRFRPILTYSVANIFS 52
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ AIE IH YSLIHDDLP+MD+ IR +PT H + E AI+ G+GL T
Sbjct: 53 THLDLVDSSSCAIEFIHAYSLIHDDLPAMDDDDIRHNQPTCHKLFGEAQAILVGDGLQTL 112
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF+++ + + + +L+ SLTH L I + ++ T + + + KTG
Sbjct: 113 AFKVLVNDNLIGS-DTKIELIKSLTHASFEMAEGQAIDLSIIAKQVNITTLETMHRKKTG 171
Query: 187 ALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE-D--LPKK 237
AL+ A GAI++ + + ++ L F +++G+ +Q+ DD+LD E D L KK
Sbjct: 172 ALLNCAVNLGAIVSKNCNNKDQTILNIFSKDIGLAYQIQDDVLDIETPDELLGKK 226
>gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591]
gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591]
Length = 323
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + L ++ ++ + D L + N + GGK+IR +
Sbjct: 1 MNLEQITALSAQDMAAVNQTILDQLNSDVVLINQLGNYIIGG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARALSYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + ++ S + + LQ M D I E
Sbjct: 112 GDFIYTRAFQMMTSLASLRVMSVMSDAVNVIAEGEVLQLMNC------NDPDITEDSYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI++ AS ++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAAAQASAILSDASSEQELALQEYGRYLGTAFQLIDDLLDYSADGKTLGK 225
>gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126]
Length = 296
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
Q+ ++ D L L+ + + RL A+R+ALL GGK++R LV + +V
Sbjct: 8 QQVKQQTDASLLTLIDEL-----PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AIEC+H YSL+HDDLP+MD+ +RRG PT HI +DE TAI+AG+ L AF
Sbjct: 63 KKDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122
Query: 129 EIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + +L+ + L + I ++ + ++KT
Sbjct: 123 TVLADAPLSTYAETKRSQLLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKT 182
Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAL+ E AI++ K L + ++G+ FQ+ DD+LD E K
Sbjct: 183 GALLKACVEMVAIVSEGLLPQTKIDLMAYAADIGLAFQVQDDILDVEGSSEK 234
>gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
SAFR-032]
gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus
pumilus SAFR-032]
Length = 320
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ S L + I+ L+ + + L A + L GGK+IR V
Sbjct: 5 AMISFLNHDIDIIEKELEQTVRSDYA--------LLSEAGLHLLQAGGKRIRPVFVLLSG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + V A+E IH SL+HDD+ +D+ +RRGKPT+ ++D A+ G+
Sbjct: 57 MFGDYDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + E ++ + I S++++ L Q D + + K
Sbjct: 115 MFARSLEYMTKINHPMAHEILSKMVVELCLGEIEQV------KDKYNMDQNLRTYLRRIK 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +C+ GAI A + + L FG +G+ +Q+ DD+LD +L K
Sbjct: 169 RKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225
>gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
Length = 288
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + + +ID L+D L N + Y++ GGK++R L
Sbjct: 2 NLKDFQKIYTPQIDKFLEDHLASEV------DNPIFSKIMSYSVMAGGKRLRPLLFLATL 55
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+
Sbjct: 56 ETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGD 115
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL + I+ I + +G Q + + + + + ++
Sbjct: 116 ALLPLGIQWITEGSNSAALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENVKV-IDQME 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+KTG L+ + + A+ A AS ++ +RL F + G +Q+ DDL+D E++ K
Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVETEQEAGK 232
>gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
3TCK]
gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
3TCK]
Length = 323
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +D + L + + Y + GG K++R LV
Sbjct: 1 MDFKAIQALTANDMAEVDAKIQAQLNSDVALINQLGF--------YIVSGGGKRLRPMLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A +E IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKETANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ ++ S+ + LQ M +D ++
Sbjct: 111 VGDYIYTRSFQMMTSLRSLKILDVMSEATNVIAEGEVLQLMNCNDPNTTEDNYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + AI+ +S + L+ +G LG FQL DD+LD D K+
Sbjct: 166 -VIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVAD-GKE 222
>gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
Length = 291
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + +I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLASGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
Length = 323
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIING-------GGKRMRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + N L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAVDYNGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELGSMEVLEVLADATNVLAEGEVLQLMNCNDPNTTE------ESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A + + + L +G+ LG FQL DDLLD D
Sbjct: 166 VIYCKTAKLFEAATRLAGVLADSPKEIQVALADYGKYLGTAFQLTDDLLDYTADTE 221
>gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
Length = 327
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 10/237 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M L + + L++ + + + I + L GGK+IR ++
Sbjct: 1 MPDAFSRALADLKNLVSEDLEE-MERLIVTTSNSDISYITDIINHLMLSGGKRIRPIMLL 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + + AAIE IH +L+HDD+ +D RRG T + + +++
Sbjct: 60 AVCKMLALQDERRILIAAAIEFIHSATLLHDDV--VDQSESRRGTKTSNSLWGNKASVLV 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL AF+ + S S+ ++ Q + + + +
Sbjct: 118 GDFLLATAFQWLVSCSNFELLTTLSRASCTIVTGEIQQMVYSKSLDITR------EKYLE 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I KT AL CES +++ +S ++++ L+ FG N GI FQ+ DDLLD K
Sbjct: 172 IISAKTAALFSATCESAGVLSESSFDDRKALKNFGHNFGITFQIVDDLLDYTAQHEK 228
>gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 346
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 19/244 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYAL------------LGGKKI 53
+ + I+ + ++ + + + ++R L +RY L GK+I
Sbjct: 1 MNDAIAGIERAMRQVVAEAEAAAGHRFSERDLPLYGVLRYHLGWADPDFRPATADAGKRI 60
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R + + + A+ A+IE +H ++L+HDD+ D RR +PTV +
Sbjct: 61 RPLICVLACAAAGGDPDVAVPTAASIELLHNFTLVHDDVQ--DGSDRRRHRPTVWALWGV 118
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI AG+ L + + + R + + L+ + G + +E +
Sbjct: 119 GQAINAGDALFALSQLPLLGSHARGVPPARVIGVAREFNATVLRIVEGQVLDLCFEERWE 178
Query: 174 ET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + KT +L+ FA SGA++A A ER R FG LG+ FQ+ DDLL
Sbjct: 179 IPVASYLNMIEGKTASLVAFAAWSGAVLAGADAERAERYRAFGRALGLGFQVQDDLLGIW 238
Query: 232 EDLP 235
+
Sbjct: 239 GEAE 242
>gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
Length = 323
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
++T L LL + + + L +A + GGK+IR +V + ++
Sbjct: 9 APVETDL-RLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPAIVLLVSKATMLDQEIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 SRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ QG+ KT +LM
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEIQQGINQFDTGITL------DAYLEKSYYKTASLMAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ ++++ ++ E L +G LG+ FQ+ DD+LD
Sbjct: 182 SAKAASVLSDVGRDITEHLYNYGRYLGLAFQIVDDILDFTS 222
>gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 321
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 79/220 (35%), Gaps = 15/220 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
R++ +LD+ + + L GGK+IR C +
Sbjct: 14 LDRVERLLDERAHADHADLAKAGRTLLE-------AGGKRIRPLFALICG--LGEREWSE 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A + +D +RRG+PTV Y + A+ G+ L A ++++
Sbjct: 65 DVAKVAAALEMIHMATLVHDDVIDRADLRRGRPTVRKSYGNLAAMYTGDYLFARAIQLLA 124
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ ++ L Q ++ KT L+ +
Sbjct: 125 EVDNLEVHRLMARGIVLLCEGEIEQIQDFYNWSQGVMTYLRR------IHRKTALLISLS 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C+ GA++ A + E L FG +G+ FQ+ DDLLD
Sbjct: 179 CQLGAMVGGAHKREVAALARFGHAVGMAFQIVDDLLDFTG 218
>gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont]
Length = 323
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L S + + GGK IR +
Sbjct: 1 MNLEQINELTAQDMAAVNQTILDQLNSDVSLINQLGYYIISG-------GGKHIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSARALNYQGSLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S + + S+ + + LQ M D I E
Sbjct: 112 GDFIYTRAFQMMTSMGSLKILALMSEAVNVIAEGEVLQLMNC------NDPDITEESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A A+ +++ L+ +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLLDYSADGETLGK 225
>gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35239]
gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
35239]
Length = 339
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 17/231 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L KL E R++ L + +TA T+ L +A GGK++R LV +
Sbjct: 9 DALEEKLTEALSRVEARLVE-ETRTAQENTTEIVSHLRAA------GGKRMRPLLVLLIS 61
Query: 63 SLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L ++ + A + + MD+ +RRG H++++ A++A
Sbjct: 62 QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMA 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A +I S + ++ L + G D D +
Sbjct: 122 GDLIFARAS-LIVSDFGRELMKYHARTFQRLCLGQMHDILGPGATDDPIDFY------LH 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD
Sbjct: 175 VLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225
>gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
warneri L37603]
gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
warneri L37603]
Length = 319
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + ++ +A GGK++R V +
Sbjct: 6 MNNEIKKVEKRLEQAIHSQDKVLEE-------AAFHLLSSGGKRVRPAFVILSSQFGKEE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ A+ + +D RRG+ T+ ++D+ TAII GN LL
Sbjct: 59 GVSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S K + I S+ ++ + Q ++ KT L
Sbjct: 119 QHLSEIKDKRVHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ A E GAI A + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLATEVGAITAGSDIKTIHKLKMIGHYIGMSFQIVDDILDFTSTEKK 220
>gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 317
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 16/226 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHL 70
+ +++++ L L + + L GGK++R +LV + AS+ N
Sbjct: 5 DKEKVESTLRKYLDSSVDFILQVGGYILDG-------GGKRVRPYLVLKFASMIRGYNKE 57
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +A+E +H SL+HDD+ +D RRG+ T + + T ++ G+ + A +
Sbjct: 58 EDYILASALEYLHTASLLHDDV--VDESEKRRGRLTANRVFGNDTTVLVGDYMYANALYL 115
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
S S + + L+ I + + I KT L
Sbjct: 116 FSIYGDIDMIKNVSDSVKKMAEGQLLEL------KKIANFDTTFDDYYKIVLGKTAVLFG 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G +A +N KE +G NLG+ FQ+ DD+LD E D K
Sbjct: 170 SCCYVGTALASEDKNLKENAYQYGVNLGVAFQIVDDILDYEGDEEK 215
>gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 293
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 20/246 (8%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
M P + L+ ++R++ L A RL+ A+RYALLGG K++R L
Sbjct: 1 MTTPFPIEAYLRSVAERVEPR----LAALADARAPGGPPRLVEAMRYALLGGGKRMRPAL 56
Query: 58 VTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
V + A +R A+E IH YSL+HDDLP+MD+ +RRG+PTVH YDE
Sbjct: 57 VLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEP 116
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
TA++ G+GL + AF + + L+ Q M+ GQ D+ E
Sbjct: 117 TAVLVGDGLQSLAFAHLL------ASPDPAAAPLARLLAENAQLMVEGQARDMAGEHARL 170
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ +++ M+T + A A + E G LG+ FQ+ADDLLD D
Sbjct: 171 GEAEVMELMRT-KTGALLAAAVAGGARCAGVPVEAAYPVGLKLGLAFQIADDLLDLTADA 229
Query: 234 --LPKK 237
L K+
Sbjct: 230 ATLGKR 235
>gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 794
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-S 63
+ K + ++ L + + L+ A Y+L G GK++R L A
Sbjct: 501 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 560
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + + ++E +H SLI DDLPS DN RRG+PT+H +D TA I G L
Sbjct: 561 EYGLQATAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 620
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A E SS + +L+ + G L+ + + + Q+ +
Sbjct: 621 IQKAIEEQSSLEGFDP-KTVLKLIRYSSQRAGDMCSGQAMDLNSKGKALSLEQLNTVCYY 679
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG + AI+A + E L+ F + GI FQ+ DDLLD + + L K
Sbjct: 680 KTGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQGNVEQLGK 735
>gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB]
gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB]
Length = 341
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 20/238 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
L + + + K +D ++ D L + Y + GGK++R LV
Sbjct: 23 EQLYALIGPDMKAVDAVIRDRLYSDVV--------LVRQVAEYIISSGGKRMRPALVLLA 74
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 75 AGALDYQGTRHQEMAAVVEFIHTATLLHDDV--VDESALRRGRDTANAMFGNAASVLVGD 132
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AF+++ + + S + LQ M D +DE + +
Sbjct: 133 FLYSRAFQMMVAVDNMRVMQVLSDATNVIAEGEVLQLMNC------HDADVDEARYMQVI 186
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A + GAI+ A+ ++ L +G +LG FQL DD+LD D K
Sbjct: 187 HYKTAKLFEAAAQLGAILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGK 244
>gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus epidermidis VCU121]
Length = 319
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + ++ +A GGK++R V +
Sbjct: 6 MNNEIKKVEKRLEQAIHSQDKVLEE-------AAFHLLSSGGKRVRPAFVILSSQFGKEE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ A+ + +D RRG+ T+ ++D+ TAII GN LL
Sbjct: 59 GVSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAIITGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +S K + I S+ ++ + Q ++ KT L
Sbjct: 119 QHLSEIKDKRVHEILSESIVDVCRGELFQFQDQFNSQQTMTNYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ A E GAI A + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLATEVGAITAGSDIKTVRKLKMIGHYIGMSFQIVDDILDFTSTEKK 220
>gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057]
Length = 291
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVKAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++ A Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 794
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 1 MNGGLPSKLQENSKRIDTI------LDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKI 53
M L + + + ++T+ ++ L S L+ A Y+L GG K++
Sbjct: 490 MVASLQTDRKSKDEFVETVRTVREQINSTLQIAKSEDIPPMKGTLIDAANYSLTGGGKRL 549
Query: 54 RSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
R L + + + + + ++E +H SLI DDLPS DN RRG+ T+H +D
Sbjct: 550 RPILTWVMGVQQYGMRPESLVPLLRSLEYMHTASLIFDDLPSQDNAPTRRGRATLHEVHD 609
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
TA + G L+ A + +S ++ + + S L L+ + + +
Sbjct: 610 SATAELTGLLLIQRATQEQASLAQFDPRSVLALIRYSSQKAEDL-CAGQAMDLNAKGKPL 668
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q+ I KTG A AI+A A + E L+ F + GI FQ+ DDLLD E
Sbjct: 669 TLEQLNAICFYKTGIAFEAALVMPAILAQAPEQEIGLLKSFAYHAGIAFQIKDDLLDVEG 728
Query: 233 D---LPK 236
D L K
Sbjct: 729 DANLLGK 735
>gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31]
gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31]
Length = 322
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ +D ++ + + + L++A GGK++R L A L ++
Sbjct: 9 AADMAGVDALITARMQSEVPVIPA-LAEHLIAA------GGKRLRPLLTVATARLAGSDN 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L AFE
Sbjct: 62 AACLKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGAAQSVLVGDFLFARAFE 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I ++ + LQ D + + I KT L
Sbjct: 120 LMVETSSMRALEILAKASRVIAEGEVLQL------TRSHDLNLSQALYLEIIAAKTAELF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A E+G + A S ++ E LR +G NLG+ FQLADD LD
Sbjct: 174 AAASEAGGVSAGVSADKSEALRAYGMNLGLAFQLADDALDYGGTTE 219
>gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma
proteobacterium HTCC2080]
gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma
proteobacterium HTCC2080]
Length = 321
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + + + ++++ ++ + L + ++ Y + GGK++R L
Sbjct: 1 MITSIRACVADEFQQVNELIIEQLKSDVAMVENVG--------HYIVDAGGKRLRPLLAL 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
AS L+ ++ A +E IH +L+HDD+ +D +RRG+ T + ++ +++
Sbjct: 53 LAASAQGGVDLSDIKFAAVVEFIHTATLLHDDV--VDLSSLRRGRATANAEFGNAPSVLV 110
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF+++ + ++ LQ M G + +Q
Sbjct: 111 GDFIYTRAFQLMVKLGDLSLLQSMADTTNTIAAGEVLQLMRAGDPSVTE------SQYLD 164
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT AL AC AI+ ++E++ +G +LGI FQ+ DD+LD D K
Sbjct: 165 VIDRKTAALFAAACRGSAILKGRDTTQQEQMAAYGRHLGIAFQMIDDVLDYTGDPQVTGK 224
Query: 237 K 237
+
Sbjct: 225 Q 225
>gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-44]
gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-44]
Length = 320
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L ++ ++ +A++ GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKVVASEQQLIED-------AALQLIEAGGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ T V A+E IH SL+HDD+ +D +RR TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLETIKHVAVALELIHMASLVHDDV--IDAALLRRNSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNLEVPEAHQALSYTILEVCKGEIEQI------KDKYNYNQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI + AS++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223]
gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223]
Length = 331
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDSMKVLRVLADTTNVLAEGEVLQLMNCNDPDTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++A A+ ++ L +G+ LG FQL DDLLD D L K
Sbjct: 174 VIYCKTAKLFEAATLLAGVLAGATLEQETALGNYGKYLGTAFQLTDDLLDYTADSDELGK 233
>gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH1134]
gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH1134]
Length = 320
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYNQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
mulieris 28-1]
gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
mulieris 28-1]
Length = 339
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L KL E R++ L + +TA+ T+ L +A GGK++R LV +
Sbjct: 9 DALEKKLTEALSRVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61
Query: 63 SLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L ++ + A + + MD+ +RRG H++++ A++A
Sbjct: 62 QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDLMDDATVRRGVTAAHVKWNNTLAVMA 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + A +I S + ++ L + G D D +
Sbjct: 122 GDLIFARAS-LIVSDFGRELMKYHARTFQRLCLGQMHDILGPGATDDPIDFY------LH 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + KTG+L+ A GA ++ S + FGE+LG+ FQ+ADD+LD
Sbjct: 175 VLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225
>gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
4113]
Length = 329
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++L+ + L L + + L GGK++R L
Sbjct: 7 DPALTTRLERGMDASEEQLRALATEARDPWVAEVAGHLFG------NGGKRLRPLLALVG 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A+R E +H SL HDD+ MD RRG P+V+ ++ TA++AGN
Sbjct: 61 AEFGDRDPSAAVRAATLAELVHVASLYHDDV--MDQARTRRGVPSVNARWGNTTAVLAGN 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL+ A ++ + + + I +++ D+ + F +
Sbjct: 119 WLLSKAAQLAAELGPEAIRLQSKVTNRLIMGQIR-------ELVGPSDDDDPLSHYFTVV 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K+ +L+ A + GA+ A + + L +GE+LGI FQ++DD+LD
Sbjct: 172 AGKSASLIAMALQLGAVRTGAPEPAVQALAEYGEHLGIAFQISDDILDITSTSE 225
>gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus]
Length = 288
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + Q + I+ L+ + +D L +A + L GGK+IR V
Sbjct: 11 ADIYMQFQSDITIIEQELEASVQAR--------HDVLKNASTHLLKAGGKRIRPVFVLLA 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E +H SL+HDD+ +D+ +RRGK TV Q+D A+ GN
Sbjct: 63 AKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTVKSQWDNKVAMYTGN 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ A E + + S ++ + Q D + +
Sbjct: 121 YIFAKAVEASAYFDHPRVHQVLSNTLVEMCIGEVEQI------RDQYNWGQNLRVYLRRI 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
K KT L+ +CE GA+ A A ++ L FG N+G+ FQ+ DD+LD K+
Sbjct: 175 KRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVG-TEKQ 229
>gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
sphaericus C3-41]
gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus
sphaericus C3-41]
Length = 324
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S L+ + I+ L++ + ++ + +++ GGK+IR V A
Sbjct: 9 LYSDLKSDIDIIERELENAVDSSSYLIND-------ASLHLLQAGGKRIRPIFVLLGAKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V +E IH SL+HDD+ +D+ +RRG+PTV Q++ A+ G+ +
Sbjct: 62 GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E I+ + L I ++ M+ + + +Q ++ ++ K K
Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVIQIEDKFRLDQGLKDYFRR------IKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +CE GA+ A L+ FG +G+ FQ+ DD+LD +L K
Sbjct: 174 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228
>gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
Length = 282
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+ D + + R+ A++Y+L GGK++R L+ + + + AA
Sbjct: 3 MPDFEDYLTHCLDSVPASRVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAA 62
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MDN +RRG T H++Y E AI+AG+GLLTYAF
Sbjct: 63 IEMIHTYSLIHDDLPAMDNDTLRRGMATCHVKYGEDVAILAGDGLLTYAFAQAMKTACPA 122
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGA 197
+ + +LS G + + L+ + + Q I KTG L+ GA
Sbjct: 123 DELVEICRLLSDYSGAGGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGA 182
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++A + + G ++G+ FQ+ DD+LD +L K
Sbjct: 183 LLAGH-KADLPVWEMIGADIGLSFQIQDDILDVTSTVEELGK 223
>gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 336
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ + + + N + S GGK++R L A
Sbjct: 16 DQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 69 NLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G +A+ + E+ R FG N+GI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAK 234
>gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes Finland 1988]
Length = 274
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 63 APNADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec]
gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
Length = 338
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L ++ ++ +L + S + A R+ + GGK+ R +V
Sbjct: 14 DPDLEKSMRVGLAAVEEMLRGSVRSEFSF--------VTEASRHLVDAGGKRFRPMVVLL 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + + AIE H +L HDD+ MD +RRG + + ++ AI+ G
Sbjct: 66 AAQFADPDAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASANARWTNTVAILTG 123
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A EI + + I ++ + +L + + G D + + +
Sbjct: 124 DFLFARASEITADLGPE-ATRILARTIATLCEGQIRETVGVGPGQDPIEHY------LRV 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L+ + GA++A A + L FGE G+ FQL+DDL+D D K
Sbjct: 177 ITEKTASLIATSARLGAMLAGADPVTTDVLAAFGERFGVAFQLSDDLIDVASPSEDSGK 235
>gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22]
gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22]
gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
Length = 323
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + ++A S E+ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAASQCAGMLADCSAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
Length = 323
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + ++A + E+ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
Length = 334
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S+L++ ++ L ++ A + ++ L++A GGK+ R LV
Sbjct: 14 DEALASRLRDRMAAVEVALAGHVVSRAGFV-SETASHLMAA------GGKRFRPLLVLLA 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + A + + + ++ MD +RRG + + ++D AI+ G+
Sbjct: 67 AETGEHPDADEVITAACVVELTHLASLY-HDDVMDEAELRRGAVSANARWDNHVAILTGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + + E+ + ++++ L L+ + G D +
Sbjct: 126 FLFSKSSELTAELGPD-AVRVQARTFTRLVEGQILETVQPGPGEDPL------AHYLDVV 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA AS+ +E L +GE +G FQL+DD+LD D
Sbjct: 179 AGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSG 232
>gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
Length = 323
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 9/220 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+D L LL + + L +A + GGK+IR +V + +
Sbjct: 9 APVDDDL-RLLTNNLKQLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLEREIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ LQG+ KT +L+
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEILQGINRFDTTLTL------EAYLEKSYYKTASLIAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ A+++ + + + L +G +LG+ FQ+ DD+LD
Sbjct: 182 SAKAAAVLSDSPREMIDHLYDYGRDLGLAFQIVDDILDFT 221
>gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 331
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + +++ + +D + L + N + GGK+IR + A
Sbjct: 8 EQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAG-------GGKRIRPLIAVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 NALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATANATFGNAASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 119 IYTRSFQMMTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 173 NKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14]
gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14]
Length = 336
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + +R++ + + + N + S GGK++R L A
Sbjct: 16 DQIVELVAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +++ A++E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 69 HLAGYSGEGHIKLAASVEFMHTATLLHDDV--VDESELRRGKLSARMVWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G ++ + E+ FG NLGI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPVLGGRPKAEEMAAASFGMNLGIAFQLVDDVLDYGGKSAK 234
>gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter
alkaliphilus HTCC2654]
gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2654]
Length = 286
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
L++ + + + L + YA+ GGK +R FLV E ASLF+V+ +
Sbjct: 2 FHDALEEANRRARARLAHALPKTGPLAEPMAYAVEGGKGLRGFLVIEGASLFDVSPDRSS 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
AAIE +H SL+HDDLP MD+ +RRG+PTVH+++DE T ++ G L AFE++
Sbjct: 62 YAAAAIEAVHASSLVHDDLPCMDDDDLRRGRPTVHVKWDEATGVLVGVALQFLAFELVGD 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL---MC 190
P D G ++G + + + + I ++ G
Sbjct: 122 PAVGSGDIRAELARTLGHGAGGFGMVMGQSLDLAAEVAPNPLTLDEIIALQAGKTGALFE 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ +GAI+ A +E LR +G LG FQ+ADD+LD E D
Sbjct: 182 WSAFAGAILGEAD---REPLRQYGAALGQAFQIADDILDIEGDAE 223
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 7/233 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
++ K + + L +T +L A+RYAL G+ + + + L
Sbjct: 36 YVKSKFKAVSISIQHALPPPFKRPETL---QLHEAMRYALSQGRLMCAIVCIAACELVGG 92
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A+ A+E I + + DDLPS+DN +R GKPTVH + TA+ AG LL
Sbjct: 93 SQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALLVLG 152
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKMKTG 186
FE +++ + + GL M E + + KT
Sbjct: 153 FEHLAAHYRGDTAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAVELETLEFVHLHKTS 212
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
AL+ + GAI AS + E LR +G G+++Q+ DD+ D E+L K
Sbjct: 213 ALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGK 265
>gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
Length = 283
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I+ LD+ L T N L +A+ Y++ GGK++R L+ ++++
Sbjct: 5 LTDWQTAINHALDEQLA-------TVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL A+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+AG+ LLT A
Sbjct: 58 VVAEALPAATALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
F I+S + L+ L G GM+ GQ +D + D + + + KT
Sbjct: 118 FAILSQHYP----EKGAALVQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ G++ + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 174 GALIQAGVAMGSLFVAIPEADQVALADFAAAFGLGFQIKDDINDVTKTTAELGK 227
>gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J]
gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J]
Length = 289
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ K+ID + + + +++L A+ Y++ GGK+IR L E +
Sbjct: 2 DKLKKIDQTIHAFYCE-----KAVISEKLNEAVLYSINAGGKRIRPILFLEVIEALQIPL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AA+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L AF
Sbjct: 57 TESHFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + LS + + + ++ + +I + KTG L
Sbjct: 117 GMLAETDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTGQL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + A +A +N G +G+ FQ+ DD+LD +
Sbjct: 177 LAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFE 223
>gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e]
gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes FSL R2-561]
gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes 10403S]
gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes J0161]
gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes J2818]
gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes FSL J2-003]
gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e]
gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
N3-165]
gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes J2818]
Length = 321
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 AANADFNAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces
ambofaciens]
gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces
ambofaciens]
Length = 357
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 73/239 (30%), Gaps = 14/239 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTA-SHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
L +++D +L+D L A + + H + + +R + GGK++R+ L
Sbjct: 12 DLDAVREQVDAVLEDFLEDKAGAAARRSHPPEVANTLRAFLAAGGKRVRALLCVVGWHAA 71
Query: 66 NVNHLT------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ + + I S + P++ R + +
Sbjct: 72 GGSEDRAAVLRVAASLELFVAFALIHDDIMDDSAVRRGRPAVHRALCTRLGQSSRAERLG 131
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
+ L + + R+ L + ++ +
Sbjct: 132 AGGALLVGNLALIWAQELLHTADLPLRRRRTVHALYDAMLEEVMYGQYLDVMGTGPDDDI 191
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + + A + + GA +A A G LG FQ+ DDLLD
Sbjct: 192 DAALRIARYKTATATVERPLQLGAAVAGADDTTVNLCTALGLPLGEAFQIRDDLLDVFG 250
>gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
Length = 344
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 85/242 (35%), Gaps = 22/242 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVT 59
+ L + L+E ++ L + + D + A R+ + GGK++R L
Sbjct: 18 DPALETALREALDVVEARLR---------LAVGNADPIADAASRHLVEAGGKRVRPMLTL 68
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L V A + L MD+ RRG + Y AI+
Sbjct: 69 LGAHLAGSAPEVPSAVLDAAVVVELTHLASLYHDDVMDSAPTRRGAAAAQLVYGNNVAIL 128
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A +++ + + + + +
Sbjct: 129 TGDLLFARASNVVAGLGPEAVRLQAETFERLCLGQLH-------ETVGPKPGEDPVEHYL 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
+ KT +L+ A GA+ A S + +GE++G+ FQLADD+LD D
Sbjct: 182 DVLSDKTASLIATAGRFGAMFAGGSGETVTAMVRYGEDVGVAFQLADDVLDLTSDVDDSG 241
Query: 236 KK 237
K+
Sbjct: 242 KR 243
>gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
Length = 315
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ + ++ + L + Y + GG K+IR + A
Sbjct: 1 DMQAVNAEILAQLNSEVLLINQLG--------HYIIAGGGKRIRPLIAVLAARALGYRGK 52
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A IE +H +L+HDD+ +D +RRG+PT + + +++ G+ + T +F++
Sbjct: 53 KHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTANAHFGNAASVLVGDFIYTRSFQM 110
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + + S +L Q M + ++ + KT L
Sbjct: 111 MTDLDSLRVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIYNKTARLFE 164
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A + AI A AS+ + L+ +G LG FQL DD+LD L K
Sbjct: 165 AATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDILDYSAQSESLGK 213
>gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 313
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ ++L++ + ++ L L RL +++ Y+L GGK++R L
Sbjct: 5 SEIKTRLRDAAAGVERYLAACLADR------GIPARLRASMEYSLNAGGKRVRPVLCLTT 58
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+LF + + AAIE IH YSLIHDDLP+MD+ +RRGKP+ H +DE TAI+AG+
Sbjct: 59 AALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKMFDEATAILAGD 118
Query: 122 GLLTYAFEIISSPKTQL-----------------KDNIRSQLMLSLTHNIGLQGMLGGQM 164
GLLT AF+ ++ + + + G+ G M
Sbjct: 119 GLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAANVLAALRAVARAAGAPGMVGGQALDM 178
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ ++ + MKTGAL+ +C SGA++A A + R+ +G ++G FQ+
Sbjct: 179 EYTGRTGVTLEEMAAMHAMKTGALLRASCLSGALLAGADADALARIADYGAHIGAAFQIV 238
Query: 225 DDLLDCEEDLP 235
DD+LD D
Sbjct: 239 DDILDEVGDEA 249
>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
Length = 266
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+L RI+ L +LL+ Q L A+ Y L GK++R L AS
Sbjct: 3 RLSLWKDRIEDRLRELLV-------PQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A+ VG AIE IH YSLIHDDLP+MDN RRG P+ H ++ E A++AG+ LLTY
Sbjct: 56 GDEEDAITVGCAIEMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTY 115
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AFE++S + + ++ L + I ++ +GG + + E + + KT
Sbjct: 116 AFELMSKEGVFRTLSP--EEVVKLINTIAVKSGIGGMVGGQALDIGGEENLEEVNLKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
AL SG I++H + + L G G++FQL DD+LD +
Sbjct: 174 ALFEACFISGGIVSHR-GDLFKELEEVGREFGLLFQLVDDILDRDG 218
>gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 340
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 11/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ + + +D + + HMQ+ A GGK++R L A L
Sbjct: 16 QASVDALRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLC 75
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L +
Sbjct: 76 GYTGERHIGLAACVEFIHTATLLHDDV--VDESDLRRGQDTANAVWGNQASVLVGDFLFS 133
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ + I S + Q + D E + + KT
Sbjct: 134 RAFQLMVGDGSLKVLKILSDASAIIAEGEVHQLI------TTNDIDTTEAAYLEVIRCKT 187
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A + G ++A + E+ L FG +LG+ FQL DD+LD + L K
Sbjct: 188 AQLFAAAAQIGPVVAERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAEQAALGK 241
>gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24]
Length = 336
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L + +Q ++ L + + A ++ + GG++ R LV
Sbjct: 13 DQALEADVQAGLVAVEEGLLEATKSEVPF--------ITEAAQHLVRAGGERFRPLLVML 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +E H +L HDD+ MD +RRG P+ + ++D A++ G
Sbjct: 65 SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + +T I + QD +
Sbjct: 123 DFLFARASQILADLGPEAVRVQALAFERLVTGQI-------LETAGPQDGRDPVDHYLDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ +C GA+M+ A + + L +GE LG+ FQLADD+LD D
Sbjct: 176 LGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASDS 229
>gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
Length = 293
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 20/246 (8%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
M P + L+ ++R++ L A RL+ A+RYALLGG K++R L
Sbjct: 1 MTTPFPIEAYLRSVAERVEPR----LAALADARAPGGPPRLVEAMRYALLGGGKRMRPAL 56
Query: 58 VTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
V + A +R A+E IH YSL+HDDLP+MD+ +RRG+PTVH YDE
Sbjct: 57 VLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEP 116
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
TA++ G+GL + AF + + L+ Q M+ GQ D+ E
Sbjct: 117 TAVLVGDGLQSLAFAHLL------ASPDPAAAPLARLLAENAQLMVEGQARDMAGEHARL 170
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ +++ M+T + A A + E + G LG+ FQ+ADDLLD D
Sbjct: 171 GEAEVMELMRT-KTGALLAAAVAGGARCAGVPVEAVYPVGLKLGLAFQIADDLLDLTADA 229
Query: 234 --LPKK 237
L K+
Sbjct: 230 ATLGKR 235
>gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora
erythraea NRRL 2338]
Length = 344
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ ++ +L + + T+ + L+ A GGK+ R
Sbjct: 26 DSALAESVRQGIADVEALLHESVRSDLEF-ATRTSLHLVDA------GGKRFRPLFALLA 78
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + ++ A +E +H +L HDD+ MD +RRG + + ++D AI+ G+
Sbjct: 79 AQFGDPRTENVIKSAAVVEMVHLATLYHDDV--MDEATMRRGATSANARWDNSVAILTGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +++ T + ++ +L + + G+ D D + +
Sbjct: 137 FLFAQASRLVADLGTDAAREM-ARTFEALVTGQMRETVGVGRDEDPVDFY------LKVI 189
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ A GA+ + AS + + G LG FQ++DD++D + K
Sbjct: 190 YEKTGSLIAIAGRFGALFSGASPEQVTAMERLGRILGTAFQISDDVIDIASPAVESGK 247
>gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009]
gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009]
gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 336
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ + + + N + S GGK++R L A
Sbjct: 16 DQLVELVAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 68
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L +++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 69 NLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDF 126
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 127 LLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQL------AAAKNTATTEDEYLAVIR 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G +A+ + E+ R FG N+GI FQL DD+LD K
Sbjct: 181 GKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVLDYGGKAAK 234
>gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
M23864:W1]
gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
M23864:W1]
Length = 332
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 6/221 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ + + + +++ +A GGK++R V + + +
Sbjct: 19 INNEIKKVEDRLQHAIKSSDQTLEDAAFHLLSSGGKRVRPVFVILSSQFGDSKDTSENTY 78
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+ + +D RRG+PT+ ++D+ TAI+ GN LL + +S K
Sbjct: 79 RVAVALELIHMATLVHDDVIDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIK 138
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
NI S+ ++ + Q ++ KT L+ A E
Sbjct: 139 DSRVHNIISKSIVDVCKGELFQFQDQFNSDQNITNYLRR------INRKTALLIQLATEV 192
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ ++AS +L+ G +G+ FQ+ DD+LD K
Sbjct: 193 GALTSNASDEVVRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233
>gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus
str. 91001]
gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua]
gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F]
gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola]
gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1]
gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92]
gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus
str. 91001]
gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516]
gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua]
gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92]
gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F]
gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola]
gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004]
gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038]
gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27]
gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 323
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + D L + Y + GG K+IR + A N
Sbjct: 13 DMAAVNTTILDQLNSDVVLINQLG--------HYIISGGGKRIRPMISVLVARALNYQGS 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ + S+ + LQ M + I E + KT L
Sbjct: 123 MTGLQSMRVLTLMSEATNVIAEGEVLQLMNC------NNPDITEESYMQVIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S AI++ AS+ ++ L+ +G LG FQL DDLLD + L K
Sbjct: 177 AAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLLDYSAEGSTLGK 225
>gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
Length = 809
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-S 63
+ K + ++ L + + L+ A Y+L G GK++R L A
Sbjct: 516 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 575
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + + ++E +H SLI DDLPS DN RRG+PT+H +D TA I G L
Sbjct: 576 EYGLQASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 635
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A E SS + +L+ + G L+ + + + Q+ +
Sbjct: 636 IQKAIEEQSSLEGFDP-KTVLKLIRYSSQRAGDMCSGQAMDLNSKGKALSLEQLNTVCYY 694
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG + AI+A + E L+ F + GI FQ+ DDLLD + + L K
Sbjct: 695 KTGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQGNVEQLGK 750
>gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 356
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 18/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++ ++++T L + + L++A GGK++R L A
Sbjct: 36 SALERRVLRGLEQVETRLLKCAGEAEDPRLAEVAGHLIAA------GGKRLRPLLTLLGA 89
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+V + E IH SL HDD+ MD +R G +V+ ++ A+ +GN
Sbjct: 90 EFGDVRGEGVIEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVNARWGNTVAVRSGN- 146
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+++ + L + L +++ + F +
Sbjct: 147 ------WLLARAARLSASLAPEAIPLQAEASERLVRGQLRELVGPDGAERRLSHYFAVIS 200
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
K+ +L+ + GA+ A A E L +GE+LG+ FQ++DDLLD +L K+
Sbjct: 201 DKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSAELGKE 258
>gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
Length = 284
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 5/224 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLT 71
+R +T L + L + S + L A+ GGK+ R L+ + + +
Sbjct: 1 MQRFETYLSENLPEVTSFHPVY--EEALGAM--LQAGGKRFRPMLLLSIVDTYEPMLYDS 56
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL V A+E H YSLIHDDLP+MD+ +RRG T+H ++DEVTAI+AG+ L + AF +I
Sbjct: 57 ALPVALALEMFHTYSLIHDDLPAMDDADLRRGHQTLHKRFDEVTAILAGDALNSDAFYLI 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + I+ +L+ + ++ + +V ++ KT L+
Sbjct: 117 AKAPLREDVKIKLVELLARDGGSRGMVLGQAIDCYFENRPLTIDEVKVLHTNKTAKLIAV 176
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + GA++ + + ++ L FG +LG++FQ+ DD++D +
Sbjct: 177 SLQMGAVIVRLAPDVQKALYDFGIDLGLLFQIQDDIIDETQTEE 220
>gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34]
gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus gallolyticus
UCN34]
Length = 289
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ I+ + Q + L+ AI Y++ GGK IR + E F +
Sbjct: 2 DKLNEINQAIRRYYAQ-----SDVVSPELIEAILYSVEAGGKLIRPLIFLEILEGFGIEL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MD+ RRG+ T H ++DE TAI+AG+ L F
Sbjct: 57 TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ + LS + ++ ++ +++ +I KTG L
Sbjct: 117 GLVANAALSADTKVCLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ F + I+A+ + ++ + LR G +G+ FQ+ DD+LD ++ K
Sbjct: 177 LTFPVVAAGIVANLAPDDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGK 227
>gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 331
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + +++ + +D + L + N + GGK+IR + A
Sbjct: 8 EQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAG-------GGKRIRPLIAVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 NALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESNMRRGRATANATFGNAASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 119 IYTRSFQMMTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 173 NKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus
cellulosilyticus DSM 2522]
gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus
cellulosilyticus DSM 2522]
Length = 323
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 12/217 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + ++ L A + L GGK+IR V A N +G A+E I
Sbjct: 17 IEKEIELNIDANHPILQEASSHLLKAGGKRIRPVFVLLSAQFGEYNIEEIKNIGVALEMI 76
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+HD +D+ +RRGK T+ ++D A+ G+ + A EI + T I
Sbjct: 77 HMASLVHD--DVVDDADLRRGKKTIKSKWDNRVAMYTGDYIFAKAVEIATYYDTPDIHKI 134
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S ++ + Q + K KT L+ +C+ GAI + A
Sbjct: 135 LSHALVEMCIGEVEQIRDQYDWNQNLRMYFRR------IKRKTALLIAISCQLGAIASGA 188
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ L FG N+G+ FQ+ DD+LD +L K
Sbjct: 189 PEAHVRALSRFGYNVGMAFQITDDILDFVGTEKELGK 225
>gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 344
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 18/236 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ GLP + + ++ L D + + A R+ L GGK+ R LV
Sbjct: 21 VDAGLPDSVLRVLEGVEAALRDDVASADPF--------VTEAARHLLDAGGKRFRPLLVA 72
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A V AA+ + MD +RRG P+ + ++ AI+
Sbjct: 73 LGAQF--GDPTRAQVVPAAVVVELTHLATLYHDDVMDEAPVRRGAPSANSRWTNSVAILV 130
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L A +I + T+ L L + + +
Sbjct: 131 GDYLFARAADISADLGTEAVR-------LQARTFARLVHGQIAETVGPRPGVDPVAHHLH 183
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG+L+ + G + A L +GE +G+ FQL+DDLLD +
Sbjct: 184 VIAEKTGSLIATSARFGGLFGGADPRYVAALAGYGETIGVAFQLSDDLLDIASESE 239
>gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2]
gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2]
Length = 307
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ Q SH + + Y + GGK++R + CA + V A IE +
Sbjct: 1 MNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFL 60
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H +L+HDD+ +D +RRG+PTV+ + +++ G+ L++ A +++ + + +I
Sbjct: 61 HTATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALRHPRLLDI 118
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ +++ LQ + +D ++ + KT + A E+GA++
Sbjct: 119 FSQSTNTISEGEVLQLINVRDPNTSEDNYMR------VIHHKTAKMFESAAETGAVLGAN 172
Query: 203 S-QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +G +LGI FQL DD+LD + D L K
Sbjct: 173 DVSDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGK 210
>gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
L20]
gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 331
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + +++ + +D + L + N + GGK+IR + A
Sbjct: 8 EQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAG-------GGKRIRPLIAVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 NALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATANATFGNAASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 119 IYTRSFQMMTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 173 NKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC198]
gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC033]
gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
FSC033]
gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
NE061598]
Length = 293
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+ I+ D + + + LLSA+ Y+ GGK+IR+ V ++
Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+
Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKTGALMCFA 192
D ++ L + + G Q+ + + + I KT +
Sbjct: 124 INYSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRAC 183
Query: 193 CESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I++ + + ++ L + +G+ FQ+ DD+LD
Sbjct: 184 IVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223
>gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
Length = 323
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 1 MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + L ++ + ++ ++ L + + A GGK+IR L
Sbjct: 1 MDQQVIRTLADDDMQAVNQLIYQRLQSDVALVNQL-------AYYIISGGGKRIRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + IE IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LSARAIGYQGDAHISLATIIEFIHTATLLHDDV--VDESVLRRGRDTANQLFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T AF+++ + S+ + +Q M +D +
Sbjct: 112 GDFLHTRAFQMMVELGNMRIMQLLSEATNLIAEGEVMQLMNCNDPSTTEDNY------LQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A AI+A+ + ++ LR +G+ LG FQL DD++D
Sbjct: 166 VIYCKTAKLFEAATHCAAILANQPAHIEQALRDYGKYLGTAFQLIDDVMDYSSSSE 221
>gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 323
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 ILAARAVGYQGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
F65185]
gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
F65185]
Length = 320
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 323
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 84/221 (38%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+D L LL ++ + L +A + GGK++R +V + ++
Sbjct: 9 APVDDDL-RLLTDNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRDIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDEAELRRSVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ QG+ KT +L+
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEIQQGINRFDTSISL------EAYLEKSYYKTASLIAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +++ S L +G NLG+ FQ+ DD+LD
Sbjct: 182 SAKAAGVLSEQSAEVNHHLYNYGRNLGLAFQIVDDILDFTS 222
>gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044]
gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 323
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + ++A + E+ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. novicida U112]
gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida
FTE]
gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG]
gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548]
gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella novicida U112]
gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549]
gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548]
gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida
FTE]
gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG]
gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida Fx1]
Length = 293
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+ I+ D + + + LLSA+ Y+ GGK+IR+ V ++
Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+
Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKTGALMCFA 192
D ++ L + + G Q+ + + + I KT +
Sbjct: 124 INYSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKLEELQILHTNKTAKMFRAC 183
Query: 193 CESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I++ + + ++ L + +G+ FQ+ DD+LD
Sbjct: 184 IVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223
>gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
Length = 326
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASL-- 64
++ ++ + L + + TQ + L +A RYA+ GGK +R L +
Sbjct: 21 AKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKHVRPLLALSTFLMLI 80
Query: 65 FNVNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+H R A+E IH YSLIHDDLP MD+ +RRG+PT HI Y E
Sbjct: 81 QTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGE 140
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A++AG+ L + AFE++ + + L+ + + M+ GQMLDI+ E
Sbjct: 141 DIALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDIKGENQM 200
Query: 174 --ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ I + KTGAL+ A GAI A + L+ + +G+ FQ+ DD+LD
Sbjct: 201 LSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDIT 260
Query: 232 ED---LPK 236
D L K
Sbjct: 261 ADTITLGK 268
>gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
Length = 316
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 21 DDLLLQTASHMQT--QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
+++L + ++ + + L +A ++ LL GGK+IR +L +L +
Sbjct: 4 EEILNSMSKELEKYFEKDSNLYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAPAL 63
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
++E IH Y+L+HDD+ MDN RRGKPTVH Y E AI+AG+ L AFE +S+
Sbjct: 64 SVELIHNYTLVHDDI--MDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALSTIDDS 121
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+K + +++ + ++ + F Q + KTGAL+ GA
Sbjct: 122 IKAHKVLKILSKACVEV---CEGQTDDMEFETTFPTMEQYVNMISKKTGALIEAPILIGA 178
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
IMA + E E L + + +GI FQ+ DD+LD D
Sbjct: 179 IMADCTMEETEALYQYSKRIGINFQIQDDILDLIGDQK 216
>gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
Length = 280
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ + + + ++ A+ Y+LL GGK+IR L+ + + AA
Sbjct: 1 MNSFEEYLQNCLNDIKDSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAA 60
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MD+ +RRG+PT HIQ+DE TAI+AG+ LLT AF +
Sbjct: 61 IEMIHTYSLIHDDLPAMDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATA 120
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGA 197
+ + ++S + L+ + + + + KTG L+ A
Sbjct: 121 SQLVSLESLISSYSGANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAA 180
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++A+ + + E + G +G+ FQ+ DD+ D +L K
Sbjct: 181 VLANH-EEDFEVWKSIGYAMGLSFQIQDDVFDVTSTCEELGK 221
>gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
Length = 323
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + I+ + E++ L+ +G LG FQL DDLLD D L
Sbjct: 166 -VIYSKTARLFEAAAQCSGILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
Length = 323
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
H + + R+ + + GGK+IR LV F + A E IH SL+H
Sbjct: 25 HAIGESDYRIRNMLSGLFNGGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVH 84
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ M + RR PT++ A++AG+ L AFEI+S + + +
Sbjct: 85 DDIIDMSD--YRRNNPTINSISGNHVAVLAGDFLFAKAFEILSEHELINSMLYFVNAIQN 142
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ +Q D + E KT +L+C C +GA A A +E
Sbjct: 143 MCSGEIVQS------YRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINL 196
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ FG +G FQ+ DD+LD + KK
Sbjct: 197 MGSFGYKIGRAFQITDDILDVTGN--KK 222
>gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
Length = 303
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 14/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
S L+E K + L+++ +LL +RYA LG GK++R+ LV
Sbjct: 7 TSHFDSWLEEVVKFSNRHLEEIFSSLH-----DVPPKLLEVMRYATLGPGKRLRAALVLA 61
Query: 61 CASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+F + RV +IE IH YSL+HDDLP MD+ +RRG+PT H++Y E
Sbjct: 62 TYEVFQTTSPDSYDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAM 121
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++A + L ++E + K + S L + +D
Sbjct: 122 ALLAADALQPLSYEHLLGSHIDSKLLVSSTKELLRATGATGMVGGQVIDILNISNHMDLE 181
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ + KTGAL+ E +I+ S E L+ + E +GI +Q+ DD+LD +D
Sbjct: 182 ALKDMHSRKTGALIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDATQDSD 241
Query: 234 -LPK 236
L K
Sbjct: 242 TLGK 245
>gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
Length = 322
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 16/236 (6%)
Query: 1 MNGGLPSKLQE-NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L + + K ++ ++ D L + + GGK++R L
Sbjct: 1 MDLNAIRDLADHDMKMVNQMIYDQLHSDVVLINQLSFYIING-------GGKRMRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + +++ A IE IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAVDYQGDDHVKLAAIIEFIHTATLLHDDV--VDESTMRRGRETANALFGNQASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ K + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELKRPRVLEDLADATNVLAEGEVLQLMNCNDPNTTE------ESYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A + L +G LG FQL DD+LD D
Sbjct: 166 VIYCKTARLFEAATHLAAVIADQPTEVCDALSDYGRYLGTAFQLVDDVLDYTADAE 221
>gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 331
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + +++ + +D + L + N + GGK+IR + A
Sbjct: 8 EQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAG-------GGKRIRPLIAVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 NALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATANATFGNAASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 119 IYTRSFQMMTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 173 NKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Olsenella uli DSM 7084]
gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Olsenella uli DSM 7084]
Length = 355
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 69/236 (29%), Gaps = 5/236 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVT 59
+ L E I+ L + + + L R+ GGK+ R LV
Sbjct: 15 AFATYLAERRPIIEAYLAEHKPTPPPDETSADSDLERYLYQPFARFVASGGKRTRPALVL 74
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ AL A IE +LIHDD+ +
Sbjct: 75 LGCEAVGGDVERALSSAAGIEHFQSAALIHDDIADEGELRRGEPCTYLTEGLGVAINTGD 134
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ T+A + + + L + + +
Sbjct: 135 LGIVRTFADVLEDDALDPTTKLRVLAELAQMEQRTVEGQALDLGWVRDGRWDVSTSDYLR 194
Query: 180 IQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KT + GAI S + L FG + G+ FQL DDLL+ D
Sbjct: 195 MARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDAGLAFQLQDDLLNLVGDA 250
>gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406]
gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga
hutchinsonii ATCC 33406]
Length = 325
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+ + D+ + + L IRY + LGGK++R L +F + +
Sbjct: 6 ERLTKDISKAISKAEFGKEPTELYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNA 65
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H ++L+HDD+ MDN +RRGK TVH +++ AI++G+ +L A++ + +
Sbjct: 66 AIAVEVFHNFTLMHDDI--MDNAPLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLMTID 123
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + + G+ M I + ++KT L+ F+ E
Sbjct: 124 EKYLKQVLDRFNET---AAGVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFSMEL 180
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G I+ A + L G + GI FQL DDLLD D
Sbjct: 181 GGILGDADEKSCTYLNTVGISAGIGFQLKDDLLDVYGDAA 220
>gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
Length = 284
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
+ + L+E I+ L LL + L ++ Y+LL GK+IR L
Sbjct: 2 IENILKEKRNLINKHLAGLLKTQRPE-----HKILFDSMNYSLLSNGKRIRGCLFLFILE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V++L L + A++EC+H YSLIHDDLP MDN RRG T H +Y E A+ AG+ L
Sbjct: 57 MFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
LT+AF++IS K KD + +LS+ + I++ I+ ++ ++ K
Sbjct: 117 LTFAFQLISQAKFSAKDRCKLIEILSIAAGAEGMVAGQVHDIQIENRSIELDELKLLDKF 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KTG ++ + + H S ++ E+LR F ++LG++FQ+ DD+LD +ED
Sbjct: 177 KTGRMIKAPVDMAIQLTHMSISDAEQLRKFAKHLGLLFQITDDILDYKED 226
>gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
Length = 280
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+ +Q + R A+ Y+L+ GGK++R L+ + ++ AI
Sbjct: 3 KEFEDYLLVRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPCACAI 62
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH YSL+HDDLP+MDN +RRGKP+ H YDE TAI+AG+GLLT AFE++ + K
Sbjct: 63 EMIHTYSLVHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSECSAK 122
Query: 140 DNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ LS G+ + D + I KT L+ G I
Sbjct: 123 QKVALVKALSWYAGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLPLVCGCI 182
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A+ + + R G LG+ FQ+ DD+LD
Sbjct: 183 LANKFD-DIDHFRKIGLVLGLEFQMQDDILDVVGSEE 218
>gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Streptococcus pyogenes NZ131]
gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Streptococcus pyogenes NZ131]
Length = 221
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ RID + ++ L+ AI Y++ GGK+IR ++ E F V+
Sbjct: 2 DKLARIDEAIRRY----YKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSL 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E IH SLIHDDLP+MDN RRG+ T H Q+ E TAI+AG+ L F
Sbjct: 58 QNAHFDLAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + + + LSL + +++ + Q+ +I KTG L
Sbjct: 118 GLIAQAELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ F ++ A++ + +++L G +G FQ+ DD+LD
Sbjct: 178 LTFPFKAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTA 221
>gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
metschnikovii CIP 69.14]
Length = 261
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 107/198 (54%), Gaps = 5/198 (2%)
Query: 43 IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+RY LLGGK+ R +LV + A+EC+H YSLIHDDLP+MD+ +R
Sbjct: 1 MRYGLLLGGKRARPYLVYITGQMLGCQLTDLDTPACAVECVHAYSLIHDDLPAMDDDDLR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGML 160
RGKPT HI++DE TAI+ G+ L T AF I++ + + + R +++ +L G QGM
Sbjct: 61 RGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGMC 120
Query: 161 GGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENL 217
GQ L ++ I ++ I KTGALM A GA+ A +L + +
Sbjct: 121 LGQALDLAAENRRITLDELETIHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYAAAV 180
Query: 218 GIIFQLADDLLDCEEDLP 235
G+ FQ+ DD+LD D
Sbjct: 181 GLAFQVQDDILDIISDTE 198
>gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 288
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L +++ I D +L + A+ + GGK++R FLV E A L
Sbjct: 2 FHERLAQDAALIQRSFDTVLGALE-------PLDITRAMAWTTEGGKRLRGFLVLESARL 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+V+ A+ AIE +H YSL+HDDLP MD+ +RRG+PT H+++DE TA++AG+ L
Sbjct: 55 HDVDEARAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALH 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AFE+ + P+ + + + +LG + + + I +++
Sbjct: 115 SLAFELCTRPEVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQ 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
G + A A + + + LR + LG+ FQ+ADD+LD E D K
Sbjct: 175 AGKTGALIEWAAAAGAVLAGADPDPLRQYARALGLAFQIADDILDVEGDAEK 226
>gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Fulvimarina pelagi HTCC2506]
gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Fulvimarina pelagi HTCC2506]
Length = 296
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 138/237 (58%), Gaps = 6/237 (2%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
L + ++ ++ L ++L + +RLL+A+R+ LGG K++R FL+ E A
Sbjct: 2 FEQSLAQTAELVEGRLSEIL-SGHDRVARGAPERLLAAMRHGTLGGGKRLRPFLLIESAR 60
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F + L + A+E IHCYSL+HDDLP+MD+ +RRG+PTVH YD+ TAI+AG+ L
Sbjct: 61 IFGIQDDAVLDIACALEAIHCYSLVHDDLPAMDDDDLRRGRPTVHKAYDDATAILAGDSL 120
Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LT AF +++ + +R +LS G L + + E ++ +Q
Sbjct: 121 LTLAFGLVAGASKIPPEARVRIAALLSADAGAGGMAGGQALDLAAEQSALSEDEIARMQA 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
MKTGAL+ FACE GAI A AS ++ RLR FGE +G+ FQLADDLLD D L K
Sbjct: 181 MKTGALIAFACEGGAIAAAASSEDQRRLRRFGEIIGLAFQLADDLLDETADAAQLGK 237
>gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
Length = 350
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + ++ +L +++ + +A+ GGK+ R
Sbjct: 32 DETLLRSIAGGLTEVEKLLREVVRSDVQAVND-------AALHLVEAGGKRFRPLFTLLA 84
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + AA+E +H +L HDD+ MD +RRG +V+ ++D AI+ G+
Sbjct: 85 AQFGPKQDDHVIVAAAAVELVHLATLYHDDV--MDEATMRRGAESVNARWDNTIAILTGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A +++ T I ++ L + + G D +
Sbjct: 143 FLFAHASRLVADLGTD-AARIIAETFGELVTGQMRETVGPGPGDDAV------AHYLTVI 195
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ + G +M+ A++ E LR FG+ +G FQ++DD++D +L K
Sbjct: 196 AQKTGSLIATSGRFGGMMSGAAEEHIEALRRFGDIIGTAFQISDDIIDIASPSDELGK 253
>gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9635]
gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9635]
Length = 319
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 88/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V + +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDD 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
Length = 323
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADSDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + N + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYNGESHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ K+ I + L LQ M +D ++
Sbjct: 112 GDFLYTRSFQMMTELKSLEVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A +S+ + L +G+ LG FQL DDLLD +
Sbjct: 166 VIYCKTAKLFEAATRLAGLLAESSEEVQTALAEYGKFLGTAFQLTDDLLDYTAETE 221
>gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
Length = 289
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ +I+ + + ++ L++AIRY+ GGK+IR L+ E F+V
Sbjct: 2 DKVDKINQAITRF-----YQGKQAVSEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTL 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V AA+E IH SLIHDDLP+MDN RRG+ T H ++DE TAI+AG+ L AF
Sbjct: 57 TDSHYDVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + LS + + + + + T + I + KTG L
Sbjct: 117 ALIAETNLSANIKVDLMHCLSHSSGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + + A +A + L G +G FQ+ DD+LD D L K
Sbjct: 177 LAYPFWAAAKIADVDEEILLDLYQAGLKVGHAFQVRDDILDVTADFTNLGK 227
>gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
Length = 338
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ R++ ++ + N + S GGK++R L A +F +
Sbjct: 25 AADMGRVNELILSKAGSDVEMIPEVANHLISS-------GGKRLRPMLTLAAAQMFGYSG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 EGHVKLATAVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + +I S + +Q ++ E + F + K KT AL
Sbjct: 136 MMVDVGSLEALDILSSAASIIAEGEVMQL------AAAKNLETTEDEHFAVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G ++A A++N++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239
>gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 326
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + S ++ + +++ + L + + Y + GGK+IR +
Sbjct: 4 MNINAIQSLIKTDMDKVNATILAQLNSDVALINQLGY--------YIVQSGGKRIRPMIA 55
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + A +E IH +L+HDD+ +D +RRG PT + ++ +++
Sbjct: 56 LLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTANAEFGNAASVL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ + I S + Q M +D ++
Sbjct: 114 VGDFIYTRAFQLMTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMK----- 168
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + AI A ++ ++ L+ +G LG FQL DD+LD + L
Sbjct: 169 -VIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLG 227
Query: 236 K 236
K
Sbjct: 228 K 228
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
A+RYA+ GG++ L A+ A+E I + DDLPS+D+
Sbjct: 2 HEAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSE 61
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QG 158
+R GKPTVH + TA+ AG LL FE +++ + + + GL G
Sbjct: 62 LRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVSRAIGSTGLLAG 121
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
++ D ++ + + KT AL+ + +GAI AS+ E E LR +G G
Sbjct: 122 QAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVTG 181
Query: 219 IIFQLADDLLDCE---EDLPK 236
+++Q+ DD+ D E+L K
Sbjct: 182 LLYQIVDDVADATKTMEELGK 202
>gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
Length = 378
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + + + +++ ++ D + + A GGK++R L CA L
Sbjct: 60 IMNLVADGMNQVNAVILDRMQSRIPLIPEL-------AGHLIAGGGKRLRPMLTLACADL 112
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ AA+E IH +L+HDD+ +D +RRG+ T +I + +++ G+ L
Sbjct: 113 VGYAGARHYKLAAAVEFIHTATLLHDDV--VDGSGMRRGRKTANIIWGNSASVLVGDFLF 170
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +FE++ ++ I S + Q + E Q I K
Sbjct: 171 SRSFELMVEAESLKVLKILSGASAVIAEGEVNQL------TAQRKIDTSEEQYLDIIGAK 224
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL AC A++A S+ E++ L +G NLGI FQL DD +D E D
Sbjct: 225 TAALFAAACRISAVVADRSEAEEQALDVYGRNLGIAFQLIDDAIDYESDEA 275
>gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida 3523]
Length = 293
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+ I+ D + + + L+ A+ Y+ GGK+IR+ V ++
Sbjct: 4 ENIIKDFEIFAKNVFAQFDCVSKTLIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCD 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V AIE IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L + AFEI+
Sbjct: 64 KVAFAIESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQD 123
Query: 134 -PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + + ++ +++ ++ ++ ++ KT +
Sbjct: 124 INCSDIARLKKINKFFAQCCGADGMVGGQQLDIEGENKKLNLEELQILHTNKTAKMFRAC 183
Query: 193 CESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I++ + + + L + +G+ FQ+ DD+LD
Sbjct: 184 IVLPYILSQNQNDEIENLLVKLADLIGLCFQIKDDILDVT 223
>gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
Length = 368
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 69/250 (27%), Gaps = 25/250 (10%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECASLF 65
+ + L+ + + + A+ + L GGK+IR
Sbjct: 14 AQIPAAVQRELEKFFTEHGPSVDVIGPP-VSEAVEHLRTFVLGGGKRIRPTFGWVGFVGA 72
Query: 66 NV----------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
N + + I S P++ + +
Sbjct: 73 NGLENTEEDPAAVLCAVSSLEFIQACALIHDDIIDASATRRGNPTVHVAAAHSHREHNWL 132
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + A + + L S ++GGQ+LDI
Sbjct: 133 GDSDKFGESLAILVGDLALVWADDMWHHSGLSHAALLRASEPWRGMRTEVIGGQILDISL 192
Query: 170 EFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + + GA +A A + LR +G ++GI FQL D
Sbjct: 193 EAAGCESEELANAVNRFKTAAYTIERPLHLGAAIAGADDDTIAALRRYGHDIGIAFQLRD 252
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 253 DILGVFGDPE 262
>gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
Length = 325
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L + I L+D + + + L + + GGK++R L+ A F
Sbjct: 3 YLSLIKEPISAELEDFISLFNQSL-SHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+
Sbjct: 62 RVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S +++ S+L +L+ LQ +IQ+E I ET + I K KT
Sbjct: 120 ALLYVSKTHSEVIVRYLSELGRTLSDGEILQL------TNIQNEAITETAYYEIIKRKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA A AS ++ E R FG+NLGIIFQ+ DD+ D
Sbjct: 174 ALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218
>gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon GZfos27B6]
Length = 360
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 2/215 (0%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+++ + D L I L GGK++R L L AL IE
Sbjct: 34 FEDAYKRNLEGRGPDTLYKPIIDLLGRGGKRLRPSLCLMACELVGGEIKKALPTAICIEF 93
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
H +SL HDD+ V G L+Y + L+
Sbjct: 94 FHNFSLAHDDIEDDSKLRRGEPALHVKYGIPIAVNAGDGLYALSYEALKANRNLLGLERA 153
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ ++ + +G + E + + + + KT L + + GAI
Sbjct: 154 WKIFEEIAELCVVLSEGQAMDLEFKERKEMGELEVIETL-RKKTAKLFGVSAKCGAIAGG 212
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AS E L E++GI FQ+ DD+L+ + K
Sbjct: 213 ASHETAEDLSSAWEDIGIAFQIRDDILNVLGEEEK 247
>gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
49726]
gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
49726]
Length = 334
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 86/238 (36%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ + ++ L + ++ + + + GGK+ R +
Sbjct: 15 DPQLNERIGAGMEAVEEKLRSETDRGQDFLKDKVS-------HLSKAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + +A + MD RRG + + +++ AI+AG+
Sbjct: 68 SE-YGAKPGCEEVIKSATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T + L + + G+ + +
Sbjct: 127 ALLAHASRLMSQLDTHTVG-HFADTFEELVTGQMRETIGAGEANPVDHYMA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L+ A GA + AS + L G +G+IFQ+ DD++D D K
Sbjct: 179 QEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGK 236
>gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735]
gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735]
Length = 325
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L + I L+D + + + L + + GGK++R L+ A F
Sbjct: 3 YLSLIKEPISAELEDFISLFNQSL-SHDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+
Sbjct: 62 RVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S +++ S+L +L+ LQ +IQ+E I ET + I K KT
Sbjct: 120 ALLYVSKTHSEVIVRYLSELGRTLSDGEILQL------TNIQNEAITETAYYEIIKRKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA A AS ++ E R FG+NLGIIFQ+ DD+ D
Sbjct: 174 ALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218
>gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
ATCC 49725]
gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
ATCC 49725]
Length = 334
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 86/238 (36%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ + ++ L + ++ + + + GGK+ R +
Sbjct: 15 DPQLNERIGAGMEAVEEKLRSETDRGQDFLKDKVS-------HLSKAGGKRFRPMMALLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + +A + MD RRG + + +++ AI+AG+
Sbjct: 68 SE-YGAKPGCEKVIKSATVVEMVHVATLYHDDVMDEADRRRGVESANSRWNNSVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T + L + + G+ + +
Sbjct: 127 ALLAHASRLMSQLDTHTVG-HFADTFEELVTGQMRETIGAGEANPVDHYMA-------VI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L+ A GA + AS + L G +G+IFQ+ DD++D D K
Sbjct: 179 QEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSDPKDSGK 236
>gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 331
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + +++ + +D + L + N + GGK+IR + A
Sbjct: 8 EQIQTLAKQDMQAVDAEILAQLNSEVVLINQLGNYIIAG-------GGKRIRPLIAVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 NALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATANATFGNAASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++ + + S +L Q M + ++ +
Sbjct: 119 IYTRSFQMMTDVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 173 NKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72]
Length = 291
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIEC 81
L + Q L I Y++ GGK+IR L+ E F + +V AA+E
Sbjct: 12 LTIEDFYRSQQVLSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEM 71
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +
Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARSELPSQVK 131
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ LSL + + + I + I KTG L+ + + ++A
Sbjct: 132 VDLIYELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAE 191
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
Q+ +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 192 VEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537]
Length = 292
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L + + ++D L+ L Q ++ L + ++YA+L GGK++R L
Sbjct: 1 MT-ELEKFINKWRPKVDQQLEQDLNQ------ATLDEDLNAMMKYAVLNGGKRLRPLLTL 53
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F + + +A+E IH YSL+HDDLP+MDN +RRGKP+VH + E I+
Sbjct: 54 AVVQSFGRTITADILKAASAVEWIHSYSLVHDDLPAMDNDTMRRGKPSVHALFGEANGIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LLT AF I+S ++ R L+ +L+ G GM+ GQ+ D+++ +
Sbjct: 114 VGDALLTGAFAILSDSRSNEDVQTRLDLIQALSALAGGYGMVYGQVNDMRNHNNTDDNNA 173
Query: 179 MI---------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I + KT AL+ +A E+GA++A ++ + LR FG++ G+ +Q+ DD+ D
Sbjct: 174 DIGVDWLLSAVHRPKTAALLTYASEAGAMLAQQ-RSVQTHLRQFGDSFGVAYQIQDDIDD 232
>gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602]
gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602]
Length = 323
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q++ ++ + + L S + + GGK+IR + A +
Sbjct: 11 QDDMAAVNASILEQLNSEVSLINQLGYYIISG-------GGKRIRPMIAVLAAKALSYQG 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
++V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF+
Sbjct: 64 DKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 121
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ ++ + ++ + + Q + D I E + KT L
Sbjct: 122 MMTDLESLPVLALMAKAVNVIAEGEVQQLINC------NDPDITEASYMQVIYSKTARLF 175
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A ++ A++A + + L+ +G LG FQL DDLLD + D L K
Sbjct: 176 EAASQASAMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDADGETLGK 225
>gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026]
Length = 288
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 9/228 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ + +ID L + L + N + Y++ GGK++R L
Sbjct: 3 LKDFQEKYTPQIDNFLKEHL------VTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLE 56
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G
Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL + I+ I + +G Q + + + + + ++
Sbjct: 117 LLPLGIQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKM-IDQMEW 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+KTG L+ + AI A A+ +E RL F + G +Q+ DDL+D
Sbjct: 176 LKTGCLIEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDV 223
>gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121]
Length = 288
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 13/235 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + I+ L + + + N L ++ Y+L GGK+IR L+ + N
Sbjct: 1 MNDLINEINDALKKSIPE------STLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ ++ A+E IH YSLIHDDLP+MDN RRGK T H Y E AI+AG+ LL A
Sbjct: 55 DYRQGMQSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLPKA 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
FE++S +++ L G GM+GGQ + +D+ ID + + I + KT
Sbjct: 115 FELVSYDSALSDTKK-VKVIQRLAFASGHLGMVGGQTLDMQSEDKAIDISTLESIHRTKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GAL+ FA S +A ++ L F ++LG++FQ+ DDLLD D L KK
Sbjct: 174 GALLTFAIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 228
>gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis Bt407]
gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis Bt407]
gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 320
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
pseudomycoides DSM 12442]
gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock3-17]
gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
Rock3-17]
gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
pseudomycoides DSM 12442]
Length = 320
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L ++ ++ +A++ GGK+IR V
Sbjct: 6 MYSFLRSDIDVIEKELKKVVASEQQLIED-------AALQLIEAGGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D +RR TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAALLRRSSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D D + K K
Sbjct: 117 AKSLECITNLEVPEAHQALSYTILEVCKGEIEQI------KDKYDYNQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI + AS++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
Length = 272
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+ + + + H + L A++Y++ GGK+IR LV V + V A
Sbjct: 3 KETIERRIEELVKPHFNLLTESAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVA 62
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E H SL+HDDLP +DN RRGKP+ H Y E A++AG+GL ++ +
Sbjct: 63 VELFHTASLVHDDLPPIDNADFRRGKPSCHRAYGEGIALLAGDGL-----FFLAFSQIAK 117
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ S T L G + Q++ I V + KTGAL F + +
Sbjct: 118 VREPKLFEEFSETAYKLLLGEAMDVEFERQEKEISVEMVEKMYSFKTGALFAFCFSAPFL 177
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++L GE G+ FQ+ DDL D L K
Sbjct: 178 LKGLDHTFVKKL---GEKFGVAFQIYDDLKDVLGSLEK 212
>gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
Length = 325
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 8/224 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L + I LDD + + + + GGK++R L+ A F
Sbjct: 3 YLSLIKQPISAELDDFISLFNQSLSHDNGLLAQVLMHIRQRGGKRMRPILILLMAKNFGC 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L+ A
Sbjct: 63 VSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S +++ S+L +L+ LQ +IQ E I ET + I K KT A
Sbjct: 121 LLYVSKTHSEVIVRRLSELGRTLSDGEILQL------TNIQKEAISETAYYEIIKRKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L GA A AS ++ E R FG+NLGIIFQ+ DD+ D
Sbjct: 175 LFESCAAIGAESAGASDDDVEAARLFGQNLGIIFQIRDDIFDYY 218
>gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
17241]
gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
17241]
Length = 293
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ +++ + L D L +Q ++ A+RY+LL GK++R+ LV E A
Sbjct: 3 FDEQFASYARQTNDALRDCLRYPGVRLQAA----VVDAMRYSLLDAGKRLRAALVLEFAR 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A + AIE +H YSLIHDDLP MDN RRGKP+ H ++ E TA++AG+ L
Sbjct: 59 LASAPREGATALACAIEMLHAYSLIHDDLPCMDNDDFRRGKPSCHKEFGESTALLAGDAL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQK 182
LT AFE + + + G + + + +
Sbjct: 119 LTLAFETAAGAPLLTDLQRVEAVCTLSKAGGVCGMIGGQVIDLACEGNTVDEATLDTLCT 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+KTGAL+ A G + A + + + +G+ FQ+ DD+LD D L K
Sbjct: 179 LKTGALLRAAARLGCLAGKADKKMYDAADRYAAAVGLAFQITDDILDVTGDAHTLGK 235
>gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
Length = 323
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ K I + L LQ M +D ++
Sbjct: 112 GDFLYTRSFQMMTELKCLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A + + L +G+ LG FQL DDLLD D
Sbjct: 166 VIYCKTAKLFEAATRLAGLLADSPIEVQTALAEYGKYLGTAFQLTDDLLDYTADTE 221
>gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 21/246 (8%)
Query: 12 NSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-- 67
++ LDD L + + + + + L GGK++R L
Sbjct: 23 IRTAVERTLDDFLDGKARDAERDDMPPEVIGTLRDFVLRGGKRLRPLLCACGWYAAGGTG 82
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPS--------------MDNGYIRRGKPTVHIQYDE 113
+ +RVGAA+E H ++L+HDDL + + Y +
Sbjct: 83 DPTAVVRVGAALELFHAFALVHDDLMDRSATRRGRPAVHRALADRYRSTRDHATAERLGV 142
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
+AI+ G+ ++ E++ + + ++ + G + +
Sbjct: 143 GSAILLGDLACVWSCELLHTAPLTPRQFSALLPVVHAMRTEVMYGQYLDLLATGEPTADV 202
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + + +GA +A + + + LG FQL DDLL D
Sbjct: 203 RGPLRVARYKTATYTCERPLHAGAALAGGPEAVLDACTAYALPLGEAFQLRDDLLGVFGD 262
Query: 234 ---LPK 236
K
Sbjct: 263 PRATGK 268
>gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 323
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + K ++ + D +Q Q+ L+ A+R+ L GK +R L A +
Sbjct: 4 LTQIRKPVEREMKDFESLFGITLQHQNP-LLMIALRHVLSRKGKLMRPILTLLAAKKYGE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + L ++E +H SL+HDD+ +D +RRG+ +V+ D A++ G+ LL+ A
Sbjct: 63 INDSVLHAAVSLEMLHTASLVHDDV--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + ++ ++ L Q+ +++ + I E Q F + + KT +
Sbjct: 121 LKHAAMAGDLRVVDLVAR------LGQTLSDGELQQLSNVKSDEISENQYFNVIRRKTAS 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
L E GA+++ AS++E RL FG +GI FQ+ DD+ D ++ K
Sbjct: 175 LFAVCAEVGALLSGASEDEIRRLGEFGTYVGICFQIRDDVFDYYDAEVGK 224
>gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 4222]
gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 4222]
Length = 320
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
G9842]
gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar sotto str. T04001]
gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
G9842]
gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 320
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
B4264]
gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
172560W]
gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
10876]
gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171]
gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
B4264]
gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
10876]
gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
172560W]
gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171]
Length = 320
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
Length = 336
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +R++ + + + N + S GGK++R L A+L
Sbjct: 22 VAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMANLTGYA 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL AF
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDFLLGQAF 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ + +I S ++ +Q ++ E + + + KT L
Sbjct: 133 RMMVEVGSLRALDILSAASATIAEGEVMQL------AAAKNTATTEDEYLAVIRGKTAEL 186
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
ACE G +A + E+ R FG N+GI FQL DD+LD K
Sbjct: 187 FAAACEVGPAIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAK 234
>gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
Length = 327
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + E+ + ++ + L + + GGK+IR + A
Sbjct: 8 EQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISG-------GGKRIRPLITVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 RALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETANAAFGNAASVLVGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++S + + S +L Q M ++ ++ +
Sbjct: 119 IYTRSFQMMTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + AI+A+AS+ + L+ +G LG FQL DD+LD + L K
Sbjct: 173 NKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGK 229
>gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1]
Length = 338
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++N +R++ ++ ++ + N + S GGK++R + A +F
Sbjct: 25 KDNMERVNQLIISMVQADVEMIPEICNYLISS-------GGKRLRPMITLAAADMFGYQG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ AIE +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+
Sbjct: 78 DGHIKLATAIEFMHTATLLHDDV--VDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+I + I + + +Q Q+ + I KT AL
Sbjct: 136 MIVDVGSMEALTILANAAAIIAEGEVMQL------AAAQNIETTASDYLKIINAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A E G I+A E+ LR +G +LG+ FQL DD LD +
Sbjct: 190 SAAAEVGPIIAGYGHEERLALREYGTSLGLAFQLVDDALDYSGNAE 235
>gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 337
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + + +R++ + S + N + S GGK++R L A L
Sbjct: 19 LVALVSADMERVNQTILSRTASDVSMIPEVANHLISS-------GGKRLRPMLTLATAGL 71
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N +++ A++E +H +L+HDD+ +D +RRGK + + +++ G+ LL
Sbjct: 72 CNYRGAGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARMLWGNEASVLVGDFLL 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF+++ + ++ S + +Q +D E + + K
Sbjct: 130 GQAFKMMVEVGSLPCLDVLSAAAAVIAEGEVMQL------SAAKDTETSEDDYLAVIRAK 183
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T AL A E G ++A + E R +G NLG+ FQL DD LD K
Sbjct: 184 TAALFGAAAEVGPLLAGRPKAEIAACRGYGLNLGVAFQLIDDALDYGGASAK 235
>gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568]
gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568]
Length = 323
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + + Y + GG K+IR +
Sbjct: 1 MNLEQITELTAQDMAAVNATILEQLNSDVTLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S ++ + S+ + + LQ M ++ D I E
Sbjct: 111 VGDFIYTRAFQMMTSLESLRVLALMSEAVNVIAEGEVLQLM------NVNDPDITEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI++ AS E++ L+ +G LG FQL DDLLD D L
Sbjct: 165 RVIYSKTARLFEAAAQSSAILSDASVAEEKALQDYGRYLGTAFQLIDDLLDYSADGSTLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 323
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 15/226 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L ++L ++ L+ ++ A+ GGK++R LV A L
Sbjct: 6 LKARLALELPPVNAALERAAHGLPEPVRPV-------ALHIFEAGGKRLRPLLVVLTARL 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ +E +H +L+HDD+ +DN RRGKP H +D I+AG+ LL
Sbjct: 59 LGYERADIYDLAVTMEMLHAATLLHDDV--LDNAASRRGKPAAHTIFDVTPTILAGDALL 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A +++ S+ L+ + + I + K
Sbjct: 117 AQANALVAGFGDPRLSLCFSEATSRTAAGEILEI------AAQRRVDTSAEEYAEIVRGK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T L+ +C+ GA+ A + + E +GENLG+ FQ+ DD LD
Sbjct: 171 TAWLIRASCQLGALRAGGTDAQVEAAAAYGENLGMAFQMVDDALDF 216
>gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
Length = 327
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + E+ + ++ + L + + GGK+IR + A
Sbjct: 8 EQIQALAAEDMQAVNAEILAQLNSEVPLINQLGFYIISG-------GGKRIRPLITVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 RALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETANAAFGNAASVLVGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ T +F++++S + + S +L Q M ++ ++ +
Sbjct: 119 IYTRSFQMMTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEENYMR------VIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + AI+A+AS+ + L+ +G LG FQL DD+LD + L K
Sbjct: 173 NKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDILDYSANAQALGK 229
>gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
2300/99 Alcoy]
gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
2300/99 Alcoy]
Length = 322
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 99/240 (41%), Gaps = 19/240 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + + E+ ++ ++ D + +Q + S GGK++R +V
Sbjct: 1 MTIDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVES-------GGKRLRPLVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + + A +E H +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANSIWGSKASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T + ++ + N L + + Q+ + + + F
Sbjct: 112 GDYLFTQSVNLMVEVGIKEILN------LLANTSHQITCGEVKQLANRHNPALTLDDYFD 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A G I+ +A ++ L +G +LG FQL DD LD D L K
Sbjct: 166 VIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGK 225
>gi|291302480|ref|YP_003513758.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290571700|gb|ADD44665.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 357
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 68/248 (27%), Gaps = 21/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFN 66
Q+ R++ L L + + ++ + A + L GGK+IR
Sbjct: 8 QDLQVRVERALSKFLSRQRDRLTGIDSELAPVCEAAEIFILGGGKRIRPAFAYWGFRGAG 67
Query: 67 VNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A + + S PS+ + R + +
Sbjct: 68 GEDGDAVVACVSALELLQASALMHDDLMDGSDTRRGEPSVHRRFALRHTSSGWSGGADDF 127
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A L T + + + GQ LD+ + +T
Sbjct: 128 GACAAILLGDLCMTWSDEMFTGAGMPDAAVAAARADFDWMRTEVSAGQYLDVLTQAQRDT 187
Query: 176 QVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
K+ + GA +A S + FG LG FQL DD+L
Sbjct: 188 TSARALKVARYKAAKYTIERPLLIGAALAGGSPELRSAYSAFGLPLGEAFQLRDDVLGVF 247
Query: 232 ED---LPK 236
D K
Sbjct: 248 GDPTQTGK 255
>gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
QM B1551]
gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
QM B1551]
Length = 321
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L + I+ L+ + + + +++ GGK+IR V A
Sbjct: 6 MYAFLNTDITLIEKELEQTVHTDETLITD-------ASLHLLQAGGKRIRPVFVLLAAKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ N V A+E IH SL+HDD+ +D+ RRGKPT+ ++D A+ G+ +
Sbjct: 59 GHYNIDQIKHVAVALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E++S K I S M+ LT Q D + + K K
Sbjct: 117 ARALEVMSEVKDVEAHKILSNTMVELTLGEIEQI------KDKYNLNQNLRVYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L+ +C+ GAI A A ++ +RL FG +G+ FQ+ DD+LD
Sbjct: 171 TALLIAASCQLGAIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEE 221
>gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
Length = 323
Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLTDSDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ ++ I + L LQ M +D ++
Sbjct: 112 GDFLYTRSFQMMTELRSLDVLEILADATNVLAEGEVLQLMNCNDPDTTEDSYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A + + L +G+ LG FQL DDLLD D
Sbjct: 166 VIYCKTAKLFEAATRLAGLLADSPIEVQTALADYGKYLGTAFQLTDDLLDYTADTE 221
>gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + L + + + GGK+IR +
Sbjct: 1 MNLEKITELTAQDMADVNAKILHQLNSDVTLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARALHYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S ++ + S + +Q M ++ ++
Sbjct: 112 GDFIYTRAFQMMTSLQSLRILELMSAATNVIAEGEVMQLMNVNDPDISEENYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A + AI+A A +++ L+ +G LG FQL DDLLD + D L K
Sbjct: 166 VIYSKTARLFEAAAQCSAILAGADTHQELALQDYGRYLGTAFQLIDDLLDYDADGATLGK 225
>gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L +L M + L +A + GGK+IR ++ A
Sbjct: 11 IEQDLL-ILENNLKRMVGAKHPILYAAAEHLFKAGGKRIRPTIILLVALSTTQALHILPE 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D IRRG TVH + A++AG+ L + +++
Sbjct: 70 HKRLAEITEIIHTASLVHDDVIDECEIRRGVNTVHNAFSTKVAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
S+++ QG+ + +I+++ KT +L+ +C
Sbjct: 130 LNNLEVVKTISKVITDFAEGEIRQGLTCFDETISMNNYIEKS------FYKTASLIASSC 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++ AI++ + N + + +G++LG+ FQ+ DD+LD L K
Sbjct: 184 KAAAILSDTTTNTQNQFYLYGKHLGLAFQIVDDILDIVGSTVSLGK 229
>gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b]
Length = 322
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + + E+ ++ ++ D + +Q + S GGK++R +V
Sbjct: 1 MTIDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVES-------GGKRLRPLVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + + A +E H +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANSIWGSKASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T + ++ + N L + + Q+ + + + F
Sbjct: 112 GDYLFTQSVNLMVEVGIKEILN------LLANTSHQITCGEVKQLANRHNPALTLDDYFD 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A G I+ +A + L +G +LG FQL DD LD D L K
Sbjct: 166 VIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDATTLGK 225
>gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579]
gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 9 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 62 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 120 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 174 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 225
>gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 9 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 62 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 120 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 174 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 225
>gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289]
gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289]
Length = 326
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 11/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + ID LDD + +H + L + + + GK++R L+ A F
Sbjct: 4 LSLIKRPIDVELDDFI-DLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A
Sbjct: 63 VSEATQHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S ++ + L +L+ LQ +IQ + I E + I + KT A
Sbjct: 121 LLYVSHTHSEAIVRRLAGLGQTLSDGEILQL------SNIQCKDITEEAYYRIIERKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L GA+ A AS+ E + RCFG+NLGI+FQ+ DD+ D D
Sbjct: 175 LFEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYY-DSE 221
>gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
Length = 338
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 18/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ ++ + +R++ +L L M T+ L A GGK+ R
Sbjct: 11 VSDEFAETVRSSLQRVEDLLLAELSSGDDVM-TEAATHLAKA------GGKRFRPMFAVL 63
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A F + +A + MD +RRG P+ + ++ AI++G
Sbjct: 64 AAQ-FGERPDADEVITSATVVEMIHLATLYHDDVMDEAPLRRGAPSANARWSNSVAILSG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S+ I ++ L + + D + + +
Sbjct: 123 DFLFARASRLVSTLGPD-AVRIIAETFAELVTGQMRETVGVKAGGDPIEHY------LRV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
KTG+L+ A GA+ + A+ ++ ERL G+ +G FQ++DD++D D K
Sbjct: 176 VWEKTGSLIAAAGRFGAMASGATPDDVERLSRIGDVVGTAFQVSDDIIDISSVTGDSGK 234
>gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
Length = 322
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
++ I L ++ LQ + + + Y L GGK+IR L+ A L
Sbjct: 1 MEAALALIGEDLTNVELQFKKDLHSDVP-LIRKVGEYVLASGGKRIRPALLLLSAKLCGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + IE IH +L+HDD+ +DN +RRG + + + +++ G+ L + +
Sbjct: 60 TGNRNVALASVIEFIHTATLLHDDV--VDNANLRRGIASANTLWGNEASVLVGDFLFSKS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + + S + LQ + + + + K KT
Sbjct: 118 FSLMVADGDLKILKVLSGATTIIAEGEVLQLICTSDLDLTL------ERYIEVVKAKTAI 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ AC+SGAI+ AS + L+ FG +LGI FQL DD LD
Sbjct: 172 LLSAACQSGAILGQASSQHETALQEFGMDLGIAFQLMDDTLDYVASEE 219
>gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus
weihenstephanensis KBAB4]
gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
2048]
gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH603]
gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST196]
gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH621]
gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus
weihenstephanensis KBAB4]
gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH621]
gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST196]
gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH603]
gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
2048]
Length = 320
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPDAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
Length = 322
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + E+ ++ ++ D + +Q + S GGK++R +V
Sbjct: 1 MTIDRIRELVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVES-------GGKRLRPLVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + + A +E H +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANSIWGSKASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T + ++ + N L + + Q+ + + + F
Sbjct: 112 GDYLFTQSVNLMVEVGIKEILN------LLANTSHQITCGEVKQLANRHNPALTLDDYFD 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A G I+ +A ++ L +G +LG FQL DD LD D L K
Sbjct: 166 VIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDDALDYCSDAATLGK 225
>gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1]
Length = 330
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + KR++ +L + + T+ + L+ A GGK+ R
Sbjct: 8 DPALAEATADGLKRVEDLLHREVHSDYEFV-TETSLHLIEA------GGKRFRPLFTLLA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + AA + MD +RRG + + ++D AI+ G+
Sbjct: 61 AQV-GPHPERDGVITAAAVVELIHLATLYHDDVMDEAAMRRGAESANSRWDNSIAILTGD 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A +++ I +T + + + +
Sbjct: 120 FLFAHASRLVADLGPDAVRIIAETFAQLVTGQMR-------ETRGPKPSDDPVEHYLRVV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ + G + + A E L FG+ +G FQ++DD++D D K
Sbjct: 173 GEKTGSLIATSGRYGGMFSGAPTEHIEALHRFGDVIGTAFQISDDIIDIASPADDSGK 230
>gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 95/239 (39%), Gaps = 19/239 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + ++ +++ + L + + Y + GG K++R L
Sbjct: 1 MDFTTIQALTADDMAKVNETIHAQLNSDVTLINQLGF--------YIVSGGGKRVRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 IISAKALGYKGQGHTLSAAFIEFIHTATLLHDDV--VDESDMRRGKATANSAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S + + Q M +
Sbjct: 111 VGDYIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPNVSE------ESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GA+++ A + L+ +G LG FQL DD++D K+
Sbjct: 165 QVIYSKTARLFEVATQVGAVLSEAPSEIEIALKNYGRYLGTAFQLIDDVMDYTS-TGKE 222
>gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
DSM 319]
gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
DSM 319]
Length = 321
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + L + I+ L+ + + + +++ GGK+IR V A
Sbjct: 6 MYAFLNTDITLIEKELEQTVHTDETLITD-------ASLHLLQAGGKRIRPVFVLLAAKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ N V A+E IH SL+HDD+ +D+ RRGKPT+ ++D A+ G+ +
Sbjct: 59 GHYNIDQIKHVAVALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E++S K I S M+ LT Q D + + K K
Sbjct: 117 ARALEVMSEVKDVEAHKILSNTMVELTLGEIEQI------KDKYNLNQNLRVYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T L+ +C+ GAI A A ++ +RL FG +G+ FQ+ DD+LD
Sbjct: 171 TALLIAASCQLGAIAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEE 221
>gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
Length = 288
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 9/228 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ + +ID L + L + N + Y++ GGK++R L
Sbjct: 3 LKDFQEKYTPQIDNFLKEHL------VTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLE 56
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G
Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL + I+ I + +G Q + + + + + ++
Sbjct: 117 LLPLGIQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKM-IDQMEW 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D
Sbjct: 176 LKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDV 223
>gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514]
gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514]
Length = 350
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 10/227 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
+ ++ ++ L+ + + ++ + A YAL G GK++R LV A+
Sbjct: 26 KHIAEPVEPFLEAVAQRLEKQVREFDPAIVPYA-EYALTGQGKQLRPALVALSANASGTL 84
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + + + IE +H +L+HDD+ MD IRRG+ T+ + A++ G+ L +A
Sbjct: 85 NDSHVTIAVIIEMVHLATLVHDDV--MDEAEIRRGRLTLAANWGNEIAVLFGDCLFAHAL 142
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ +S T + ++ LQ ++ + + F + +MKT L
Sbjct: 143 KLAASFPTPEICRAVAMATNTVCSGEILQT------QQRRNFQFSQPEYFKVLEMKTAEL 196
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+C+ GA + A ++ LR FG LG +QL DD LD
Sbjct: 197 FALSCDLGACLTGAPAVQRNGLRQFGMALGTAYQLYDDCLDLFGSEA 243
>gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 342
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 82/221 (37%), Gaps = 6/221 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+LLL+ +RL RYALL GK +R L+ E A + ++E
Sbjct: 23 ELLLRELDRRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSVE 82
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SL+HDD+ D R + L + + +
Sbjct: 83 YLHVGSLVHDDVIDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGGLP 142
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAI 198
R + + G+ G M + + + +KTGAL AC GAI
Sbjct: 143 PGRVLGAVRVFARAGVDLCRGQSMEGELRGDLGCGLDRYLTMSSLKTGALFRAACRGGAI 202
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S ++ L + E+LG+ FQ+ DDLL D K
Sbjct: 203 LGGGSPAQQHALTAYAEHLGLAFQMHDDLLPYTSDPRTTGK 243
>gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
Length = 271
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
QE I+T L +L +D++ A+RY ++ K++R L +FN
Sbjct: 6 QEIINLINTSLKEL---------KFSDDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNE 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +L AIE IH YSL+HDDL MDN RRGK TVH +Y E A++ G+ LL Y+
Sbjct: 57 SITESLNYALAIELIHNYSLVHDDLECMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYS 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++S D + ++ + G+ L D I E + I KT
Sbjct: 117 FEVLSESIKNEFDAKCANYIVKKSGCFGM----IKGQLLDIDSEISEKNIIEIYDKKTCN 172
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + S I++ N +L + NLG+ FQ+ DD++D E DL
Sbjct: 173 LLKASTVSAGILSRVGDNTLLKLEDYAFNLGMAFQIIDDIMDYENDLK 220
>gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
Length = 320
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus
pseudofirmus OF4]
gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus pseudofirmus OF4]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + Q + I+ L+ + +D L +A + L GGK+IR V
Sbjct: 4 ADIYMQFQSDITIIEQELEASVQAR--------HDVLKNASTHLLKAGGKRIRPVFVLLA 55
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + +E +H SL+HDD+ +D+ +RRGK TV Q+D A+ GN
Sbjct: 56 AKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTVKSQWDNKVAMYTGN 113
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ A E + + S ++ + Q D + +
Sbjct: 114 YIFAKAVEASAYFDHPRVHQVLSNTLVEMCIGEVEQI------RDQYNWGQNLRVYLRRI 167
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
K KT L+ +CE GA+ A A ++ L FG N+G+ FQ+ DD+LD K+
Sbjct: 168 KRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVG-TEKQ 222
>gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus MN8]
gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus MN8]
Length = 332
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 19 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 72 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 132 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233
>gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
Length = 346
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + E +++ ++ D + + A GGK++R L CA
Sbjct: 26 APMMALVAEGMNQVNAVILDRMQSRIPLIPEL-------AGHLIAGGGKRMRPMLTLACA 78
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L ++ AA+E IH +L+HDD+ +D +RRG+ T +I + +++ G+
Sbjct: 79 DLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTANIIWGNSASVLVGDF 136
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ ++ I S + Q + E Q I
Sbjct: 137 LFSRSFELMVEAESLKVLKILSNASAVIAEGEVNQL------TAQRKIDTSEEQYLDIIG 190
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT AL AC A++A + E++ L +G NLGI FQL DD +D E D
Sbjct: 191 AKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAIDYESD 241
>gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
Length = 323
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ I++ ++D+ + M+++ + Y + GGK++R L A
Sbjct: 2 DIKAIQALIESDMNDVNQLIHAQMRSEVA-LVNQLGLYIVNSGGKRVRPMLAILAAKALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T
Sbjct: 61 YTGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ I + + LQ M + + KT
Sbjct: 119 SFQLMVGLGKMQIMQILADATNIIAEGEVLQLMNCNDPDTTE------ASYMQVIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A AI+ + + L +G +LG FQL DD+LD D L K
Sbjct: 173 KLFEAATGLAAIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNADANQLGK 225
>gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 307
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 20/249 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M S L ++ + D+ + + S R+ A Y+L GGK++R V
Sbjct: 1 MPNSFESILLKSKQVFDSFFESYTAKLFSP-----KTRITEACLYSLHAGGKRVRPIFVI 55
Query: 60 --------ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+S H + A+ECIH YSLIHDDLP+MDN RRGKPT H Q+
Sbjct: 56 NSFFEPNDLFSSEPFDTHQSVFLAALAVECIHTYSLIHDDLPAMDNDDTRRGKPTCHKQF 115
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDI 167
DE TAI+AG+ L + +F+++S + +I+ + + L M +
Sbjct: 116 DEATAILAGDTLNSLSFQLLSMMDANDPNLLRDSIQILHQGAGMTGMILGQMEDIEEEKN 175
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADD 226
E+++ I + KTGAL+ + G + A E+E L + + +G++FQ+ DD
Sbjct: 176 PSSNARESKLESIHEKKTGALITSSFLLGNRL-RADWKEREFVLTRYAKEIGLLFQITDD 234
Query: 227 LLDCEEDLP 235
+LD E +L
Sbjct: 235 ILDVEGNLA 243
>gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
Length = 288
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 9/228 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ + +ID L + L + N + Y++ GGK++R L
Sbjct: 3 LKDFQEKYTPQIDNFLKEHL------VTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLE 56
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G
Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL + I+ I + +G Q + + + + + ++
Sbjct: 117 LLPLGIQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKM-IDQMEW 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D
Sbjct: 176 LKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDV 223
>gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
Length = 361
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 81/236 (34%), Gaps = 7/236 (2%)
Query: 6 PSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ LQ ++T L +L + + + L A Y L K++R LV L
Sbjct: 19 QAWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCL 78
Query: 65 FNVN---HLTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAII 118
+ R A +E +H + LIHDD+ G + + E A++
Sbjct: 79 ARGSAVVPSGLWRFAAGLELLHTFLLIHDDVADQAELRRGAAPLHRMLAPGRAGEDLAVV 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A E++ + + H Q + E +
Sbjct: 139 VGDHLFARALEVMLGSGLTCVAGVVQYYLGVCRHTAAGQYLDLDLGRAPLAEVTLFQTLR 198
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ C GA++ AS E L G ++G+ +QL DDLL D
Sbjct: 199 VAHLKTARYGFCAPLVCGAMLGGASSGLVEELERVGRHVGLAYQLRDDLLGLFGDS 254
>gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 322
Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 9 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 62 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 122 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 176 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 223
>gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
O11]
gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
O46]
Length = 314
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 1 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 53
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 54 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 114 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 167
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 168 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215
>gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 335
Score = 98.4 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L +++ E I+ L + T+ M L+ A GGK++R LV
Sbjct: 11 IDEDLATRIVERLGTIEDRLRASV-STSDDMVRWTGRHLMDA------GGKRVRPMLVLL 63
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
ASL +++ +E H SL HDD+ MD+ RRG + H + AI+ G
Sbjct: 64 AASLGDIDADGVQDAAVLVELTHLASLYHDDV--MDSAPTRRGTDSAHALWGNNVAILTG 121
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A + + T + + + GQ+ + +
Sbjct: 122 DFLFARASGLSARIGTDAVREH----------SETFERLCLGQLHETVGPKPGDDPFAHY 171
Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT +L+ A GA ++ A Q + +R +GE +G+ FQLADD+LD E D
Sbjct: 172 ISVLSDKTASLLALAGSLGASLSGAPQGSADVMRRYGEKVGVAFQLADDVLDLESDAA 229
>gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
LVS]
gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
OSU18]
gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
FSC200]
gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
257]
gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
holarctica FSC022]
gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica
LVS]
gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
257]
gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
holarctica FSC022]
gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 293
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+ I+ D + + + LLSA+ Y+ GGK+IR+ V ++
Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+
Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKTGALMCFA 192
D ++ L + + G Q+ + + + I KT +
Sbjct: 124 INYSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHINKTAKMFRAC 183
Query: 193 CESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I++ + + ++ L + +G+ FQ+ DD+LD
Sbjct: 184 IVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223
>gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 200]
gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis IBL 200]
Length = 320
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
Length = 358
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q++ +R++ + + + N + S GGK++R + A +F
Sbjct: 45 QKDMERVNQFILSMAKSEVEMIPEISNHLISS-------GGKRLRPMITLASAHMFGYQS 97
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+
Sbjct: 98 DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFK 155
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ + I KT AL
Sbjct: 156 MMVDVGSIEALSVLANAAAIIAEGEVMQL------SAAKNIKTSPSDYLKIINAKTAALF 209
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A E+ LR +G +LG+ FQL DD LD +L K
Sbjct: 210 SAAAEVGPIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSGSAQNLGK 259
>gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 345
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 93/240 (38%), Gaps = 21/240 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA---------LLG--GKKIRS 55
+ L+ +D L + M+ A+ + + G GK +R
Sbjct: 14 ALLERTRSAVDPELRSAIASLPGSMRRI-------AMYHFGWERSDGTPVAGATGKAVRP 66
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV + A+R AA+E H ++L+HDD+ +D RR +PT +
Sbjct: 67 ALVLAACQALGGDPRQAVRAAAAVELAHNFTLLHDDV--IDEDPTRRHRPTAWSVFGTAD 124
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AIIAG+ + A +++ + +L + Q + +
Sbjct: 125 AIIAGDAMSALALRLLAEDRHPASGPAAVRLAACVIELCAGQQADC-AFEERPPLEVTLE 183
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ AC GA+ A A + + + FG G+ FQL DDL+ D
Sbjct: 184 ECLAMATAKTGALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLIDDLIGIWGDPE 243
>gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
9790]
gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
9790]
Length = 345
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 9/235 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNV 67
L +I+ L + + ++ + + + + GGK++R ++ SLFN
Sbjct: 8 LSSLKDKIEKELKNFFEKKLDACDDENIRYVIKELMEFTMNGGKRLRPIMMITGYSLFND 67
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT-------VHIQYDEVTAIIAG 120
++ +IE Y LIHDD+ + R + AI+AG
Sbjct: 68 IDDNIIKASISIELAQSYLLIHDDIMDQSDMRRGRPSFHRSVETRLNDPRNSMNIAIVAG 127
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + +++ E + + +K+ I + S +G L + DEF + + +
Sbjct: 128 DLIDSFSHEALLTSGFDIKNLISADYEFSKVIEDTGKGQLIDIFSSLDDEFSESRLMKLH 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A ++ + + LR +G+N+GI FQ+ DD+L D
Sbjct: 188 YMKTARYTIEGPLVMGAMLAG-NKKDIDYLRIYGKNIGIAFQIKDDILGLFGDEK 241
>gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 361
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 29/259 (11%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTE 60
+P + + + + L++ ++ S M+ A+ + + GGK+IR
Sbjct: 1 MPRSVDDVPRCVVAHLNEFFMERQSAMKAISP-VADEAMAALTDFTINGGKRIRPTFAWL 59
Query: 61 ------------CASLFNVNHLTA--------LRVGAAIECIHCYSLIHDDLPSMDNGYI 100
A + + + + I S +P++ +
Sbjct: 60 GWMGSLQLTFSDAAEHPDADAVMHAASSLELLQSCALIHDDIIDSSATRRGMPTVHEHFK 119
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
+ E + A + + ++
Sbjct: 120 QSHSAQAWHGRGESYGNAVAILIGDLALSWADDMFMEAALPPAQRDRAWQPWQDMRTEVV 179
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGEN 216
GQ++D+ E + + +++ + GA +A A Q+ LR FG +
Sbjct: 180 CGQIMDVTAEAQGDGSLRTAERVNRYKTAAYTVERPLHIGAALAGAPQDTVTALRTFGRD 239
Query: 217 LGIIFQLADDLLDCEEDLP 235
+G+ FQL DD L D
Sbjct: 240 IGVAFQLRDDQLGVFGDPE 258
>gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 634
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 73/247 (29%), Gaps = 22/247 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRL---LSAIRYALLGGKKIRSFLVTECASLFNV 67
+ +R+ +L + ++ +D + A + L GK++R
Sbjct: 250 DVRRRVSAVLRRFAGSRGALLRGIDDDLIPFVRIATEFLLAEGKRLRPAFCYWGWRGAGG 309
Query: 68 NHLTA-----------LRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHIQYD 112
+ + S P+ + G +
Sbjct: 310 PDCDEIVTAAAAIELLHACALIHDDVMDASDTRRGRPAAHRRFSRVHRTAGWRGDPADFG 369
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
AI+ G+ L +A E++++ + + +R+ + + G + +
Sbjct: 370 RSAAILLGDLFLAWADELLAASRMPPEALVRAWPTYGRMRSELMAGQYLDLVGQAEAGPH 429
Query: 173 DETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
++ + + G ++A A + FG LG FQL DDLL
Sbjct: 430 GGLDPGRAVRIARYKTAGYTVVRPLQLGGLLAGAPPDLLAAYAAFGLPLGEAFQLRDDLL 489
Query: 229 DCEEDLP 235
D
Sbjct: 490 GVFGDPA 496
>gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 338
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ R++ ++ + N + S GGK++R L A +F
Sbjct: 25 AADMGRVNELILSKAGSDVEMIPEVANHLISS-------GGKRLRPMLTLAAAQMFGYAG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 EGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + +I S + +Q ++ E + F + K KT AL
Sbjct: 136 MMVDVGSLEALDILSSAASIIAEGEVMQL------AAAKNLETTEDEHFAVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G ++A A++N++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239
>gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM
12444]
gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM
12444]
Length = 337
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + E ++ ++ D + + T A GGK++R L A
Sbjct: 17 APMMALVAEGMNSVNAVILDRMQSRIPLIPTL-------AGHLIAGGGKRMRPMLTLASA 69
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L ++ AA+E IH +L+HDD+ +D +RRGK T +I Y ++ G+
Sbjct: 70 ALLGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKTANIVYGNPATVLVGDF 127
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ + I S ++ Q + Q+ ++ + I
Sbjct: 128 LFSRSFELMVEDGSLKVLRILSNASAVISEGEVDQLVAQRQIDTTEEMY------LDIIA 181
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL AC A++A ++ L +G NLGI FQLADD +D + D
Sbjct: 182 AKTAALFSAACRIAAVVAERPDADELALDAYGRNLGIAFQLADDAIDYDSDAA 234
>gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus E1410]
gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M876]
gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus C160]
gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M899]
gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus C101]
gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M809]
gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M1015]
gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA252]
gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus E1410]
gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M876]
gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus C101]
gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M899]
gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus C160]
gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
aureus subsp. aureus M1015]
gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus M809]
Length = 319
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 285
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFL-VTECASLFNVN 68
+ +D +L+ +S ++ ++ +++ +++Y+L GGK+IR L + +
Sbjct: 1 MRDLDNLLEKFNNYLSSLLEYDNSPQHKVIDSMKYSLFSGGKRIRPLLSLITFCEFSEDS 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L AAIE IH YSLIHDDLP+MD+ RR KPT H Y E AI+AG+GLL +
Sbjct: 61 LDKILPFAAAIEMIHTYSLIHDDLPAMDDDDFRREKPTNHKVYSEGIAILAGDGLLNMSM 120
Query: 129 EIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQK 182
EI+ ++D + M + + G+ GM+GGQ +DI + D T+ + K
Sbjct: 121 EILLRHIENIEDPEDLKRAMRAMKYIYNATGVNGMIGGQTIDISRDVSDYTEDDCENMYK 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+KTGAL+ + G I+A + +L FGE++GI +Q DDLLD E+D
Sbjct: 181 LKTGALIKASVVVGGIIAGLDPDNITKLARFGESIGIAYQFEDDLLDEEKD 231
>gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
Length = 346
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + E +++ ++ D + + A GGK++R L CA
Sbjct: 26 APMMALVAEGMNQVNAVILDRMQSRIPLIPEL-------AGHLIAGGGKRMRPMLTLACA 78
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L ++ AA+E IH +L+HDD+ +D +RRG+ T +I + +++ G+
Sbjct: 79 DLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTANIIWGNSASVLVGDF 136
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ ++ I S + Q + E Q I
Sbjct: 137 LFSRSFELMVEAESLKVLKILSNASAVIAEGEVNQL------TAQRKIDTSEEQYLDIIG 190
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT AL AC A++A + E++ L +G NLGI FQL DD +D E D
Sbjct: 191 AKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAIDYESD 241
>gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21193]
Length = 319
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
Length = 323
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 21/239 (8%)
Query: 4 GLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
L S ++ + ++ + L S + + GGK+IR +
Sbjct: 2 NLESIIKLTSADMTAVNEAILYQLNSDVSLINQLGYYIISG-------GGKRIRPMIAVL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + V A IE IH +L+HDD+ +D +RRGK T + + +++ G
Sbjct: 55 TGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVLVG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T +F++++ + + S + LQ M + +
Sbjct: 113 DFIYTRSFQMMTDLDSMRVLKLMSSATNVIAEGEVLQLMNCNDPDISE------DDYMQV 166
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + AI++ A+ +++ + +G LG FQL DDLLD + D L K
Sbjct: 167 IYSKTARLFEAASHASAILSGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNNQLGK 225
>gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
Corby]
gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
Corby]
Length = 322
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + + E+ ++ ++ D + +Q + S GGK++R +V
Sbjct: 1 MTIDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVES-------GGKRLRPLVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + + A +E H +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANSIWGSKASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T + ++ + N L + + Q+ + + + F
Sbjct: 112 GDYLFTQSVNLMVEVGIKEILN------LLANTSHQITCGEVKQLANRHNPALTLDDYFD 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A G I+ +A + L +G +LG FQL DD LD D L K
Sbjct: 166 VIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGK 225
>gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. mediasiatica FSC147]
gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 293
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 17 DTILDDLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
+ I+ D + + + LLSA+ Y+ GGK+IR+ V ++
Sbjct: 4 ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ A+E IH YSLIHDDLP+MDN +RRGKPT HI+++E TAI+AG+ L AFEI+
Sbjct: 64 KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKTGALMCFA 192
D ++ L + + G Q+ + + + I KT +
Sbjct: 124 INYSDIDKLKKINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRVC 183
Query: 193 CESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I++ + + ++ L + +G+ FQ+ DD+LD
Sbjct: 184 IVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223
>gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
D2]
gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
D2]
Length = 323
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M+ + + + +R++ ++ L + + Y + GGK++R L
Sbjct: 1 MDIKSIQALTDNDMQRVNQLIYKQLQSDVALVNQLG--------LYIVSSGGKRVRPMLS 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A +E IH +L+HDD+ +D +RRG T + ++ +++
Sbjct: 53 ILSAKALGYEGDAHITLAAIVEFIHTATLLHDDV--VDESDLRRGNATANAEFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF+++ + I + + LQ M + ++
Sbjct: 111 VGDFIYTRAFQLMVGLEEMRVMKILADATNVIAEGEVLQLMNCNDPDTTEQSYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + A++ +E+L+ +G +LG FQL DD+LD D L
Sbjct: 166 -VIYSKTAKLFEAATQLAAVITRKDAATEEQLKLYGMHLGTAFQLVDDVLDYSADQAELG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC586]
Length = 323
Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 16/234 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + +++ + L S + + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISG-------GGKRLRPLLAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + + Q M +
Sbjct: 112 GDFIYTRSFQMMTELGSLKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------ASYMQ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 166 VIYSKTARLFEAATQIGAILCDASSEVELAMQNYGKYLGTAFQLIDDVMDYTSD 219
>gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
DSM 45100]
Length = 340
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L LQ + + +L + L++ + + N A+ GGK+ R
Sbjct: 20 TSELNEMLQARVEVAEKLLRESLMEGEPFLTDKIN-------HLAIAGGKRFRVVFTLLA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L+ + AA+ + MD RRG + ++++ AI+AG+
Sbjct: 73 A-LYGDKPTSQNVYKAAVVVELTHLATLYHDDVMDEADRRRGADSANMRWGNSIAILAGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++++ + + L + + + D + ++ +
Sbjct: 132 YLFAVASDMLADLGAATV-SHFASTFRELVTGQMRETVGCAEGEDPIEHYMT------VI 184
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA + A ++ L FG N+G +FQ+ DD++D D
Sbjct: 185 QEKTGVLIAAAGFLGAEHSGAPAEVRDALHAFGRNMGQVFQIVDDIIDIWSDPE 238
>gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 332
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 19 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 72 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 132 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233
>gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
Length = 365
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 64/249 (25%), Gaps = 23/249 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + +LD+ L AS ++ D +L AI L GGK++R
Sbjct: 13 SDLRRAVSDVLDEFLRDQASVLREVSEDCAPVLDAISALLSGGKRLRPAFCYWGFHGTGG 72
Query: 68 NHLT------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ + S P+ + + E
Sbjct: 73 ELPDEGIVTAAASLELFQAAALIHDDVMDDSDTRRGQPAAHRRFEALHARSGWDGSRERF 132
Query: 116 AIIAGNGLLTYAFEI---------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+ ++ I + + L L +
Sbjct: 133 GLAGAVLAGDLCLGWSDELFSRARLAPDALDRGRRIFNVMRTQLMGGQYLDMLEQASSDQ 192
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + ++ + G +A AS + FG LG FQL DD
Sbjct: 193 RGTDGAVDRARRVVTFKSAKYSIEHPLLLGGSLAGASTDLLADYSRFGLALGEAFQLRDD 252
Query: 227 LLDCEEDLP 235
+L D
Sbjct: 253 VLGVFGDPA 261
>gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968]
gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150]
gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968]
gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150]
Length = 293
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ + R ++ L ++ + + SAI Y+L GGK+IR LV SL +V
Sbjct: 2 ISKYINRHESYLKQVIAD-----SSVPAVIIRSAIDYSLFPGGKRIRPILVYLTGSLLDV 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT-Y 126
+ + AA+E HCYSLIHDDLP+MDN +RRG+P+ H +DE TAI+AG+G+
Sbjct: 57 DLNILDAIAAAVELTHCYSLIHDDLPAMDNDDLRRGRPSCHKAFDEATAILAGDGMQALA 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKM 183
+++ ++ + + L G+ GM+ GQ LD+ + I +
Sbjct: 117 IDVLLTYLPHLVQPDRIISITRELVQATGISGMVSGQSLDLSELAKSSIDDERLKEIHHL 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTG L+ E + + + LR + ++G++FQ+ DD LD
Sbjct: 177 KTGRLILACIEMVLRIQSTPEAYQSALRTYANHIGLVFQMQDDYLDY 223
>gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-28]
gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-28]
Length = 320
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E +++ + S +L + Q D + + K K
Sbjct: 117 AKSLECVTNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus ED133]
Length = 314
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 1 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 53
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 54 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 114 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 167
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 168 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215
>gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
19061]
gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
19061]
Length = 323
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 21/239 (8%)
Query: 4 GLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
L S ++ ++ ++ + + L + + + GGK+IR +
Sbjct: 2 NLESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISG-------GGKRIRPMIAVL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++V A IE IH +L+HDD+ +D +RRGK T + Y +++ G
Sbjct: 55 AGKALQCGDEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKETANAIYGNAASVLVG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T +F++++ + + S + +Q M + +
Sbjct: 113 DFIYTRSFQMMTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDISE------DDYMRV 166
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A S AI+A+A+ ++ LR +G LG FQL DDLLD + D L K
Sbjct: 167 IYSKTARLFEVAAHSAAILANATPEQEIALRDYGCYLGTAFQLIDDLLDYDSDNNTLGK 225
>gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
Length = 323
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 14/227 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTAL 73
++ L LL + + + L +A + L G GK+IR +V A + + +
Sbjct: 11 VEADL-RLLTENLKKLIGARHPVLYAAAEH-LFGAEGKRIRPAIVLLLARAISPSQEISS 68
Query: 74 RVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
R E ++ +D +RRG PTVH + AI AG+ L A ++
Sbjct: 69 RHRRLAEITEMIHTASLFHDDVVDQSDLRRGLPTVHSLFGNRIAIQAGDFLFAQASWYLA 128
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ SQ++ QG KT +L+ +
Sbjct: 129 DLDNLTVVKLLSQVIKDFAEGEIQQGFNRFDTSLTM------AAYLDKTYYKTASLIANS 182
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++ +++ S + L +G ++G+ FQ+ DD+LD +DL K
Sbjct: 183 SKAVGVLSGISAQSSQSLYEYGRHVGLAFQIVDDILDFTRSTDDLGK 229
>gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 358
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 84/257 (32%), Gaps = 29/257 (11%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M LP R+ L D L + + + +R+ L GGK+IR
Sbjct: 1 MEADLPG-------RVQETLADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTF 53
Query: 58 VTECASLFNVNHLTALRVGAAI-----ECIHCYSLIHDDLPSMDNG-------------- 98
E + +L+HDDL +
Sbjct: 54 AWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDLIDDSDTRRGNPTVHQAFAAL 113
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+ + Q+ AI+ G+ L +A +++ + + R L G
Sbjct: 114 HRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAMARGLRPWRAMRTEVLAG 173
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ ++ + + + + + + E GA +A A + E LR FG ++G
Sbjct: 174 QYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLELGAELAGADETALEALRRFGSDIG 233
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQL DDLL D
Sbjct: 234 VAFQLRDDLLGVFGDPE 250
>gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
Length = 338
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ R++ ++ + N + S GGK++R L A +F
Sbjct: 25 AADMGRVNELILSKAGSDVEMIPEVANHLISS-------GGKRLRPMLTLAAAQMFGYAG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 EGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + +I S + +Q ++ E + F + K KT AL
Sbjct: 136 MMVDVGSLEALDILSSAASIIAEGEVMQL------AAAKNLETTEDEHFAVIKAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G ++A A++N++ LR +G NLG+ FQL DD LD DL K
Sbjct: 190 SAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239
>gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus C427]
gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus C427]
Length = 319
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1273]
gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1272]
gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1272]
gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1273]
Length = 320
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPDAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
Length = 323
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 10/225 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L L+ ++ QH +A GGK++R +V + + R
Sbjct: 11 VEADLAILVDNLKDLVRAQHPVLFAAAEHLFQAGGKRMRPAIVLLLSRALLPDQDLTPRH 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
E ++ +D+ +RRG P+VH + AI AG+ L A +++
Sbjct: 71 RRLAEITEMIHTASLLHDDVVDDSGVRRGVPSVHSLFGNRIAIQAGDFLFAQASWYLANL 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S+++ QG+ KT +LM + +
Sbjct: 131 DNLEVVKLLSEVIKDFAEGEIQQGINCFDTSLTL------EAYLEKSYYKTASLMANSAK 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +++ S + L +G +G+ FQ+ DD+LD L K
Sbjct: 185 AAGVLSGTSLQVNQDLYAYGRCVGLAFQIVDDILDFTGSTNALGK 229
>gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
Length = 302
Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 9/213 (4%)
Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
S+ + + +A+RYA+ GGK +R+F+V E A LF+++ A AIE +H YS
Sbjct: 32 QISYALSGVPGPVAAAMRYAVEGGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYS 91
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+HDDLP MD+ +RRGKPTVH ++DE TA++AG+ L AF++++ T + R +L
Sbjct: 92 LVHDDLPCMDDDDMRRGKPTVHRKWDETTAVLAGDALQALAFQLVT--HTACPADRRLEL 149
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHA 202
+ L GL+GM+GGQ DI E ++ +Q KTGAL+ ++C +GA+MA
Sbjct: 150 VAGLATAAGLRGMVGGQARDIAAESAQTPLTLEEITALQAGKTGALISWSCGAGAVMAGQ 209
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S LR +G+ LG+ FQ+ DD+LD E D
Sbjct: 210 STG---PLRRYGDCLGLAFQIWDDVLDVEGDAA 239
>gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99]
Length = 296
Score = 98.0 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 15/240 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L L++ + ++ ++D +Q L ++RY+L GGK+IR L+
Sbjct: 4 MNQNLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 53
Query: 60 ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + + + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+
Sbjct: 54 ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
AG+ LLT AFE I+ + I+ L+ ++ G QGM+GGQ + +++ I +
Sbjct: 114 AGDALLTKAFEKIA-LTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 172
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTGAL+ FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD + K
Sbjct: 173 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 232
>gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
membrane protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
Length = 314
Score = 98.0 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 1 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 53
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 54 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 114 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 167
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 168 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215
>gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
RF122]
gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
RF122]
Length = 319
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 306
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ A ++ L GGK+ R LV A + + +E H +L HDD+ MD
Sbjct: 12 ITEAAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDE 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG + + ++D A++ G+ L + A +I++ + +T I
Sbjct: 70 ATVRRGVDSANARWDNSVAVLTGDFLFSRASQILAGLGPEAVRIQAEAFERLVTGQI--- 126
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ +D + KTG+L+ A GA+M+ A E L +GE L
Sbjct: 127 ----LETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 182
Query: 218 GIIFQLADDLLDCEEDL 234
G+ FQLADD+LD D
Sbjct: 183 GVAFQLADDVLDIASDS 199
>gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH60]
Length = 332
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 14/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 19 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 72 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 132 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD KK
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTS-AEKK 233
>gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
Length = 394
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 84/262 (32%), Gaps = 31/262 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVT 59
L + L++ +D LD +A+ + A+ + + GGK++R
Sbjct: 26 DLRAPLKDVPAAVDRALDAYFDHSAAEFSAIAPE-FNDAMAVLRGFVMGGGKRVRPTFAW 84
Query: 60 EC------------ASLFNVNH----------LTALRVGAAIECIHCYSLIHDDLPS--- 94
+S+ +V+ + I S P+
Sbjct: 85 AGFRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALIHDDIIDESDTRRGNPTTHR 144
Query: 95 -MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
++ + RG Y AI+AG+ L++A +++++ R +
Sbjct: 145 VFESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATAGLSPSIVDRVRGPWRAMRT 204
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
L G L+ + +I + GA +A A + E L +
Sbjct: 205 EVLAGQQLDIALENNGSESIADAMQVINFKTASYTVARPLHIGAALAGADERTIELLLEY 264
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
G +G FQL DD L D
Sbjct: 265 GTLVGQAFQLRDDQLGVFGDPA 286
>gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
S4-120]
gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
S4-120]
Length = 324
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 9 LYANMQKDIDSVEKELKKALSGAAADTTSDAALHLLEA------GGKRIRPMFVCLSARL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 63 AAEADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 122 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 176 TALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230
>gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
Length = 310
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 20/228 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
++ + + L + + Y + GG K+IR + A +
Sbjct: 1 MAAVNATILEQLNSDVTLINQLGY--------YIISGGGKRIRPMIAVLAARALHYQGDK 52
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF+++
Sbjct: 53 HITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMM 110
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+S ++ + S+ + + LQ M ++ D I E + KT L
Sbjct: 111 TSLESLRVLALMSEAVNVIAEGEVLQLM------NVNDPDITEESYMRVIYSKTARLFEA 164
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S AI++ AS+ E++ L+ +G LG FQL DDLLD D L K
Sbjct: 165 AAQSSAILSEASEAEEKALQDYGRYLGTAFQLIDDLLDYSADGSTLGK 212
>gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 322
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + + + E+ ++ ++ D + +Q + S GGK++R +V
Sbjct: 1 MTIDRIRALVSEDFNAVNNLIIDKIQSQVGLIQDLSQHIVES-------GGKRLRPLVVL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ + + A +E H +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTANSIWGSKASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T + ++ + N L + + Q+ + + + F
Sbjct: 112 GDYLFTQSVNLMVEVGIKEILN------LLANTSHQITCGEVKQLANRHNPALTLDDYFD 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + KT L A G I+ +A + L +G +LG FQL DD LD D L K
Sbjct: 166 VIRAKTALLFAAAACIGPILTNAPIELRNSLYNYGLHLGNAFQLIDDALDYCSDAATLGK 225
>gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase
subunit 2) (spore germination protein c3)
[Staphylococcus aureus subsp. aureus ST398]
gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
membrane protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 319
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus H19]
gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus H19]
Length = 319
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDK 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
Length = 330
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
+++ + ++ L L+ T L +RY L G GK++R L+ A L
Sbjct: 9 AAQVARLRRLVEQALPGLVEATRE------PAELYEPVRYVLSGTGKRMRPVLLMLAAEL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + L A+E H ++L+HDD+ MD+ RRG+PTVH+Q+DE TA++ G+ L+
Sbjct: 63 YGRPAESVLPAALAVEVFHAFTLVHDDI--MDHAAERRGRPTVHVQWDEATALLCGDYLM 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
++ ++ + + + + Q + + + K
Sbjct: 121 GLSYALLGQVENAPLARVLAMFHRMVERLCEGQALDKAFETRAHVSV---AEYLQMVDGK 177
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL+ + G ++ A + + + L G NLG FQ+ DDLLD
Sbjct: 178 TSALLELCLQLGGLLGGAGEADLQALEQLGRNLGRAFQIQDDLLDLTA 225
>gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
Length = 284
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 77/230 (33%), Positives = 127/230 (55%), Gaps = 6/230 (2%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
+ + L+E I+ L LL + L ++ Y+LL GK+IR L
Sbjct: 2 IENILKEKRNLINKHLAGLLKTQRPE-----HKILFDSMNYSLLSNGKRIRGCLFLFILE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F V++L L + A++EC+H YSLIHDDLP MDN RRG T H +Y E A+ AG+ L
Sbjct: 57 MFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDAL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
LT+AF++IS K +D + +LS+ + I+++ I+ ++ ++ K
Sbjct: 117 LTFAFQLISQAKFSAEDRCKLIEILSIAAGAEGMVAGQVHDIQIENKSIELDELKLLDKF 176
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KTG ++ + + H S ++ ++LR F ++LG++FQ+ DD+LD +ED
Sbjct: 177 KTGRMIKTPVDMAIQLTHMSISDADQLRKFAKHLGLLFQITDDILDYKED 226
>gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614]
gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614]
Length = 358
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 77/245 (31%), Gaps = 19/245 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
RI T +D + + A + RL+ ++ GGK+ R+
Sbjct: 11 ASFRDRIQTAVDAFVDEQAGQLGPLGGDAARLVREAHTSVSGGKRFRAAFCYWGHRAVAA 70
Query: 68 NHLTA-------------LRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHIQ 110
+ + + S P+ ++ + G Q
Sbjct: 71 DVPDETALVRACASLELLHASALVHDDLMDASDTRRGHPATHRLFESEHRAAGWRGDPEQ 130
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
Y AI+ G+ LL++A E++ + + + + G + +
Sbjct: 131 YGAAAAILLGDLLLSWADELLRRCGLPIAQVAPALEVFDRCRTEVIAGQFLDVSVQARGR 190
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
ET + +++ + GA +A A L FG LG FQL DDLL
Sbjct: 191 ADVETAMTVLRYKSAKYSIERPLHIGAALAGAGPETMAELSAFGLPLGEAFQLRDDLLGV 250
Query: 231 EEDLP 235
D
Sbjct: 251 FGDPE 255
>gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
hominis SK119]
gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
hominis SK119]
Length = 318
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 86/236 (36%), Gaps = 22/236 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN + + ++ L + + S +Q +A GGK++R V
Sbjct: 6 MNSEIKN--------VEKRLKNAIKSNDSVLQE-------AAFHLLSSGGKRVRPAFVLL 50
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ F +T A+ + +D RRGK T+ ++D TAI+ G
Sbjct: 51 SSQ-FGPKKITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDVTTAILTG 109
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
N LL + +S + I S ++ + Q ++
Sbjct: 110 NFLLALGLKQLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRR------ 163
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L+ + E GAI + A +L+ G +G+ FQ+ DD+LD K
Sbjct: 164 INRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219
>gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1271]
gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH1271]
Length = 320
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 325
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 86/230 (37%), Gaps = 13/230 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + ++E+ ++T L+ L ++ + + S GGK++R L
Sbjct: 1 MKNDMFDVIEEDLTVLETALEAALSSDSALVSDIGAHLVSS-------GGKRLRPALFLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + A+ ++ +D RRG T + ++ AI++G
Sbjct: 54 AAR-GGTAFDRDRAMPIAVALELIHTASLVHDDVIDEADTRRGAATTNAKWGNQVAILSG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + AF+ ++ + + L+ +G + Q ++ I
Sbjct: 113 DYIFARAFKQVARVG----YSWHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI 168
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ KT + CE GA + S + +G +G+ FQ+ DDLLD
Sbjct: 169 -RKKTADFLEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDL 217
>gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
Length = 355
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 10/238 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
++ +P+ L + ++ LD M++ H L +Y L GK+IR LV
Sbjct: 27 LDRPVPTTLDDIRVPVEDDLDAFRSYFREAMRSDHM-LLDKVTQYVLWQKGKRIRPILVL 85
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A AA+ + ++ +D+ RRG +++ + A++
Sbjct: 86 LSAQACGGAATDQTHRAAALVEL-LHTATLVHDDVVDDAEERRGVFSINALWKNKIAVLL 144
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ L + S L + Q+ + IDE F
Sbjct: 145 GDFLLSRGLL------LSLDHDDYSVLHTLSDAVRRMSEGELLQIEKSRLLDIDEETYFR 198
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
I KT +L+ +SGA+ + ER+ FGE LG+ FQ+ DDL D D K
Sbjct: 199 IISDKTASLISACTKSGAVSVTDDEALIERMDEFGETLGLAFQIRDDLFDFSAEDAGK 256
>gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Staphylococcus
pseudintermedius HKU10-03]
Length = 293
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 15/240 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN L L++ + ++ ++D +Q L ++RY+L GGK+IR L+
Sbjct: 1 MNQSLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 50
Query: 60 ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + + + V A+E IH YSLIHDDLP+MD+ +RRGKPT H Y E AI+
Sbjct: 51 ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
AG+ LLT AFE I+ T + I+ L+ ++ G QGM+GGQ + +++ I +
Sbjct: 111 AGDALLTKAFEKIA-LTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 169
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ I KTGAL+ FA E+ I+ Q ++L F ++LG+IFQ+ DDLLD + K
Sbjct: 170 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 229
>gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056]
Length = 291
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E ++I ++D + Q + L I Y++ GGK+IR L+ E F +
Sbjct: 4 NEKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLE 57
Query: 69 -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +++ + + + LSL + + + I + I KTG
Sbjct: 118 YGLLARAELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 178 LLMYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 339
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 76/212 (35%), Gaps = 2/212 (0%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
LL + D+L + +RYALL GK +R + A + L E
Sbjct: 23 RLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTE 82
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H +L+HDD+ D R V + + ++ S +
Sbjct: 83 YLHVATLVHDDIIDADTLRRGRPAVPVAYSIPGAIVA-GDHLIFHAFQAMVESGRAVPAA 141
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
++ S + L + + D + ++KTG+L C GA++
Sbjct: 142 SVVSAVTALAEAGQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGALLG 201
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A L +GE++G FQ+ DDLL
Sbjct: 202 GADPLVASALARYGEHVGTAFQIRDDLLSYLS 233
>gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
Length = 325
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L I LDD + + T + L A+ + GGK++R L+ A F
Sbjct: 3 YLSIIKSPISKELDDFISLFNKAL-THDDGLLAKALEHIRNRGGKRMRPLLMLLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A +E +H SL+HDD+ +D RRG+ +++ Y+ A++ G+ +L+
Sbjct: 62 EVTFVAQHAAIGLELLHTASLVHDDV--VDESVQRRGQASMNATYNNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A ++ ++ ++L +L++ LQ ++ + + KT
Sbjct: 120 ALLNVAYTQSDDIVRDLAELGRTLSNGEILQLTNISNQEISEEVYYQ------VINQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA AS+ E R FG+ +GIIFQ+ DD+ D
Sbjct: 174 ALFEACAVIGAKAGRASEEAIEAARLFGQRIGIIFQIRDDIFDYY 218
>gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH70]
gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus TCH70]
Length = 332
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 19 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 72 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 132 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233
>gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism
HF4000_APKG1C9]
Length = 575
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 10/224 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
+++ I+ D L + +RL A+ + GG K++R+ + H
Sbjct: 260 RNQVEGIIMDSLGKMQQ-------ERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDG 312
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+GA+IE IH ++L+HDD+ +D IRRG VH+ YD+ TAI AG+ +L FEI+
Sbjct: 313 HYTLGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEIL 370
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + + + + Q + E + KT A+
Sbjct: 371 AESPEIDADKLAFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFET 430
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+GAI+A AS + + +G NLG+ FQL DDL+D D
Sbjct: 431 CATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTE 474
>gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
R309803]
gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
R309803]
Length = 320
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E +++ + S +L + Q D + + K K
Sbjct: 117 AKSLECVTNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI + A++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIASGANRETVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
Length = 323
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + D L + + + GGK+IR +
Sbjct: 1 MNLEQIIELTAQDMAAVNATILDQLNSDVTLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + +++ A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAARALDYQGNKHIKIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++S ++ + S+ + +Q M + I E
Sbjct: 112 GDFIYTRSFQMMTSLESLRVLQLMSEATNVIAEGEVMQLMNC------NNPDITEDSYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S +I+A AS ++ + +G LG FQL DDLLD D L K
Sbjct: 166 VIYSKTARLFEAASQSSSILADASPEQEMAFQDYGRYLGTAFQLIDDLLDYSADGSTLGK 225
>gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
Length = 323
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+D L LL ++ + L +A + GGK++R +V + ++
Sbjct: 9 APVDDDL-RLLTNNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRDIT 67
Query: 73 LRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R E ++ +D +RR PTV+ +D A++AG+ L + +
Sbjct: 68 PRHRRLAEITEMIHTASLVHDDVVDEAELRRRVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S+++ QG+ KT +L+
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEIQQGINRFDTSISL------AAYLEKSYYKTASLIAN 181
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +++ S L +G +LG+ FQ+ DD+LD
Sbjct: 182 SAKAAGVLSEQSAEVNHHLYNYGRDLGLAFQIVDDILDFTS 222
>gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
Length = 325
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + + + +D ++ L ++ Q + ++SA GGK++R ++ A
Sbjct: 8 ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIISA------GGKRLRPVILLMSAR 60
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 61 AFGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANAVFGNAASVLVGDFL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ + I S + LQ + D + + + +
Sbjct: 119 YSRAFQMMVDAGSMRIMEILSNATNVIAEGEVLQLLNM------HDPDVTIERYLQVIRY 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + + GA++A A +E +G +G FQL DD+LD
Sbjct: 173 KTAKLFEASAQLGAVLAGADAAMEEAAAEYGRRIGTAFQLIDDMLDYTASAE 224
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
A+RYA+ GG++ L A+ A+E I + DDLPS+D+
Sbjct: 2 HDAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSE 61
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QG 158
+R GKPTVH + TA+ AG LL FE +++ + + + GL G
Sbjct: 62 LRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVGRAIGSTGLLAG 121
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
++ D ++ + + KT AL+ + +GAI AS+ E E LR +G G
Sbjct: 122 QAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVTG 181
Query: 219 IIFQLADDLLDCE---EDLPK 236
+++Q+ DD+ D E+L K
Sbjct: 182 LLYQIVDDVADATKTMEELGK 202
>gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
J2-071]
Length = 321
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 16/235 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L
Sbjct: 60 APNADFDAVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLF 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E ++ K + S + + L+ Q D + K K
Sbjct: 119 AKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T L+ +C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 173 TALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 227
>gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 310
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
++D L H L +A+R+ LL GK++R L A N + L G
Sbjct: 24 AVIDRRLGLLVPP-AASHPAVLHAAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLDFG 82
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH SLI DDLP MD+ +RR +PT H+QY E A++A GLL+ AF +++
Sbjct: 83 CALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFG-VAAAAP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACES 195
+ + R + + L+ +G G+ GGQ D++ + + + KTG L A E
Sbjct: 142 GVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAVEI 201
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-------DLPK 236
+A A + + L+ ++G +Q+ DD+LD D+ K
Sbjct: 202 AGHVAAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGK 249
>gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus
Py2]
Length = 359
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
++D L H L +A+R+ LL GK++R L A N + L G
Sbjct: 73 AVIDRRLGLLVPP-AASHPAVLHAAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLDFG 131
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH SLI DDLP MD+ +RR +PT H+QY E A++A GLL+ AF +++
Sbjct: 132 CALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFG-VAAAAP 190
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACES 195
+ + R + + L+ +G G+ GGQ D++ + + + KTG L A E
Sbjct: 191 GVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAVEI 250
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-------DLPK 236
+A A + + L+ ++G +Q+ DD+LD D+ K
Sbjct: 251 AGHVAAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGK 298
>gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus TCH130]
gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
aureus TCH130]
gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 332
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 19 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 72 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 131
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 132 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 185
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 186 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233
>gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. Newman]
gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. Newman]
gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
Length = 322
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 9 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 62 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 122 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 176 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 223
>gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
Length = 795
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-S 63
+ + + + +++ L + D + +A Y+L G GK++R +
Sbjct: 502 KEEFSDIIETVRKQVNESLDIPKDEKVSLMEDFISNAANYSLRGDGKRLRPIMAWVMGVK 561
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + L + ++E +H SLI DDLP+ DN IRRG+PTVH Y+ A + G L
Sbjct: 562 EYGLKESEMLPLLRSLEYMHTASLIFDDLPAQDNADIRRGRPTVHKVYNVAIAELTGLFL 621
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A E + + Q +L+ T L+ + + + Q+ M+
Sbjct: 622 TQKAIEEQTFLQ-QFDLRNVLKLIRYSTETTADLCKGQTMDLEAKGKQLTLEQLNMMCFY 680
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTG A AI+A Q E E L+ F + GI FQ+ DDLLD E + K
Sbjct: 681 KTGKGFEAALMMPAILAARDQVEMEALKKFSYHAGIAFQIKDDLLDVEGEVRLTGK 736
>gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
Length = 335
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + +R++ + + + N + S GGK++R L A
Sbjct: 15 EELVALVAGDMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMA 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L +++ A++E +H +L+HDD+ +D +RRGK + + + +++ G+
Sbjct: 68 NLAGYTGDGHIKLAASVEFMHTATLLHDDV--VDESEMRRGKLSARMLWGNEASVLVGDF 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S ++ +Q ++ E + + +
Sbjct: 126 LLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQL------AAAKNTATTEDEYLAVIR 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE G ++A+ + E+ R G NLGI FQL DD+LD K
Sbjct: 180 GKTAELFAAACEVGPVIANRPKAEQTACRSVGMNLGIAFQLVDDVLDYGGKSAK 233
>gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
Length = 331
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 17/229 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
+ + +++ + +D + L + Y + GG K+IR + A+
Sbjct: 10 IQALAKQDMQAVDAEILAQLNSEVVLINQLG--------HYIIAGGGKRIRPLIAVLAAN 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ +D +RRG+ T + + +++ G+ +
Sbjct: 62 ALGYRGDKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATANATFGNAASVLVGDFI 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T +F++++S + + S +L Q M + ++ +
Sbjct: 120 YTRSFQMMTSVDSLEVLKVMSAATNALAEGEVQQLMNVNDPNTTEANYMR------VIYN 173
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ++ + L+ +G LG FQL DD+LD
Sbjct: 174 KTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDILDYSA 222
>gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
Length = 341
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---- 65
+ + ++ ++ + + + + L++A GGK++R L A L
Sbjct: 23 ETDMAGVNRLITERMQSDVPIIPA-LAEHLIAA------GGKRLRPLLTVAAARLAASDG 75
Query: 66 -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ L++ AA+E IH +L+HDD+ +D +RRGK H+ + +++ G+ L
Sbjct: 76 AGSDNDHCLKLAAAVEFIHTATLLHDDV--VDGSALRRGKVAAHLIWGGAQSVLVGDFLF 133
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AFE++ + I ++ + +Q M D + + I + K
Sbjct: 134 ARAFELMVETNSMKALEILARASRVIAEGEVMQLM------RSHDLNLSQALYLEIIQAK 187
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
T L A E+GA+ A Q + L+ +G NLG+ FQL DD LD E L K
Sbjct: 188 TAELFAAASEAGAVSAGVDQTRADALKAYGLNLGLAFQLVDDALDYGGATETLGK 242
>gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
[Cenarchaeum symbiosum A]
Length = 272
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
RID L+ + + L +RYA+ GGK+IR ++ A
Sbjct: 10 RIDAALE-------AELALHPELELTGPLRYAITGGKRIRPIILVLAAESVGSADDNTYA 62
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E +H S+IHDD+ +D+ +RR K HI+Y + T+I+ G+ +L +I S
Sbjct: 63 AACAVELLHTESVIHDDI--IDDETMRRHKDPFHIKYGQNTSILTGDFVLGLILKICSRL 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S + ++ ++G + + + KT A +
Sbjct: 121 DNVRIADDLSTTAMMMSEGEAIEG------RLENSGDVTFDDYLKVIEYKTATAFEVASK 174
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
GAI+ S+ + E L FG+N+GI +Q+ DDL D
Sbjct: 175 IGAILGGGSERQVEDLTGFGKNIGIAYQIKDDLND 209
>gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
Length = 349
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 26/249 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF--------- 56
++ + ++ + + + Q +RL A RY L GGK++R
Sbjct: 13 EAVRARRELVNEAIPE-------ELPVQQPERLYEASRYLLDAGGKRLRPAVLLAAAEAL 65
Query: 57 -----LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
L T+ S ++ + AA+ S MD+ +RRG P VH +Y
Sbjct: 66 ADVEPLSTDYRSFPTLSGEEIDMMDAAVSVEVIQSFTLIHDDIMDDDDLRRGVPAVHREY 125
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
D TAI+AG+ L + AFEI+ + + +L+ T +G + +D
Sbjct: 126 DLETAILAGDTLYSKAFEIMLETGADPSRMVDALDVLATTCTKICEGQALDVTFEKRDNV 185
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + KT L + AI+ A Q + L +G ++G FQ+ DD+LD
Sbjct: 186 AP-EEYLEMVEQKTAVLYAASACLPAILQGADQETIDALYGYGLDIGRAFQIQDDVLDLT 244
Query: 232 --ED-LPKK 237
D L K+
Sbjct: 245 VPSDKLGKQ 253
>gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 368
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 23/251 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L + L E +R D ++ D Q+ S + +R L GGK+IR
Sbjct: 21 VDAALGNFLDEQEERFDDLISD--PQSRSQWRAATQS-----LRGFLAGGKRIRPAFCYW 73
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------- 113
+GAA +S +D RRG P++H Q+ E
Sbjct: 74 GWRGAGGGADDEGVIGAAAALELLHSFALVHDDIIDASDTRRGAPSLHRQHAELHRRSGG 133
Query: 114 ---------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
A++ G+ L + +++++ + ++ +++ + + G
Sbjct: 134 RGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIREARPLVAHSLTELVLGQYLDVA 193
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+I + G ++A AS + LG FQL
Sbjct: 194 EQACSRHSVSRSYTVIHYKTAKYTIERPLHLGGVLAGASPALLGSYTAYAMPLGEAFQLR 253
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 254 DDVLGAFGDPA 264
>gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
Length = 336
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +R++ + + + N + S GGK++R L A+L
Sbjct: 22 VAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPILTLAMANLTGYA 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL AF
Sbjct: 75 GDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVGDFLLGQAF 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ + +I S ++ +Q ++ E + + + KT L
Sbjct: 133 RMMVEVGSLRALDILSAASATIAEGEVMQL------AAAKNTATTEDEYLAVIRGKTAEL 186
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
ACE G +A + E+ R FG N+GI FQL DD+LD K
Sbjct: 187 FAAACEVGPTIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAK 234
>gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 280
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
L+ + L+ ++ + D L + + L GGK++R + F
Sbjct: 2 EYLERRVALAEDRLEAVIDEVE-------PDELSEEVGHVVLAGGKRVRPAVTILACEAF 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + A+ A IE +H SL+ DD+ +D +RRG P+ +Y AIIA +GLL
Sbjct: 55 DGDPDAAVDFAAGIEFVHNASLVIDDI--IDRSEVRRGTPSAWAEYGYGPAIIASDGLLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF + S + T L + G+ ++ E + + + KT
Sbjct: 113 EAFALFS-----------ADPRAMRTVAEALVELGEGEATELAARPTTEAEYMELARRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GAL A E GAI A + + + E +G+ FQ+ DD+LD DL K
Sbjct: 162 GALFRAAAELGAIAGGADSHAVDSFGEYAERVGVAFQMRDDVLDATADADDLGK 215
>gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
Length = 327
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 17/231 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ + Q++ + +D + L + Y + GG K+IR +
Sbjct: 8 EQIQALAQQDMQAVDQEILAQLNSEVPLINQLG--------HYIISGGGKRIRPLIAVLA 59
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ L A IE +H +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 60 ANALCYTGRKHLTCAAFIEFVHTATLLHDDV--VDESALRRGRETANAIFGNAASVLVGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ T +F++++S + + S +L Q M + ++ +
Sbjct: 118 FIYTRSFQMMTSVDSLEVLKVMSAATNALAEGEVQQLMNINDPHTTEANYMR------VI 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + AI+A ASQ ++ L+ +G LG FQL DD+LD
Sbjct: 172 YNKTARLFEAATQCVAIVAGASQQIEQALKAYGCYLGTAFQLVDDILDYSA 222
>gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
SW]
gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
SW]
Length = 340
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 10/225 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
L+ + L+ + Q S M + + + Y + GG K++R L A L
Sbjct: 19 LEALIALVADDLNAVNEQILSRMHSSV-ELIPQLGGYIVAGGGKRLRPVLTLAAAQLCGY 77
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E +H +L+HDD+ +D +RRG+ + + + +++ G+ L A
Sbjct: 78 QGTRQTALAACVEFLHTATLLHDDV--VDESDLRRGQASANAVFGNKASVLVGDFLFARA 135
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+I+ + I + LQ + + K KT
Sbjct: 136 FQIMVEDGSLDVLRILCTASAVIAEGEVLQLTTTNDTDTTE------EAYLEVIKAKTAE 189
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L ACE G I+A E+ LR +G NLGI FQL DD+LD
Sbjct: 190 LFAAACELGGIVADRPAVEQAALRSYGMNLGIAFQLVDDVLDYSA 234
>gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus MW2]
gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MSSA476]
gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus MW2]
gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus MSSA476]
Length = 319
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
Length = 332
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L++ + + L M+T L RY L GK+IR LV A L
Sbjct: 13 SLKDIQRPVAEELKHFQRYFRDAMRTSVP-LLDHVARYLLRQKGKRIRPLLVLLTAKLCG 71
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
R A +E +H +L+HDD+ +D RRG +++ + A++ G+ LL+
Sbjct: 72 GITEATYRAAALVELLHSATLVHDDV--VDGAEQRRGMFSINAIWKNKVAVLFGDFLLSR 129
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + + S + ++ LQ + IDE F I KT
Sbjct: 130 GLLLALDHRDYDTLHALSDAVRRMSEGELLQIE------KSRHLDIDEATYFRIISDKTA 183
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+L+ +SGA+ A + + GE LG+ FQ+ DDL D E+ K
Sbjct: 184 SLIAACTKSGALSATDDPRVIDEMYLMGEKLGLAFQIRDDLFDYGEEAGK 233
>gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021]
gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 355
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 70/252 (27%), Gaps = 18/252 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + L +D L + + + + L+SA L GGK++R
Sbjct: 1 MTTS-AAALDTIRFEVDRSLKEFVERQLPQVSAPEVAPLISAAEEFLAGGKRLRPAFCYW 59
Query: 61 CASLFNVNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
A + + S + +P+ + +
Sbjct: 60 GWRGAGGGDDPALFTAAASLELLQASALVHDDVMDASDLRRGMPAAHRRFQTLHEKAGWH 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
E A L S H+ ++ GQ LD+ +
Sbjct: 120 GSAEQFGEGAAILLGNLMLIWSGEMWRGSGLPPASLAAAQQVHDHMRTELMCGQYLDLLE 179
Query: 170 EFIDETQVFMIQKMKTGALMCFA----CESGAIMA--HASQNEKERLRCFGENLGIIFQL 223
+ E ++ ++ G ++A + +G ++GI FQL
Sbjct: 180 QAHGENTFDSALRVALFKSGKYSVEQPLRLGLVLAARGRAPWIDRLCEEYGRSVGIAFQL 239
Query: 224 ADDLLDCEEDLP 235
DD+L D
Sbjct: 240 RDDILGVFGDPA 251
>gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 336
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +R++ + + + N + S GGK++R L A L
Sbjct: 22 VAADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMAHLTGYA 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL AF
Sbjct: 75 GDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSARMLWGNEASVLVGDFLLGQAF 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ + +I S ++ +Q ++ E + + + KT L
Sbjct: 133 RMMVEVGSLRALDILSAAAATIAEGEVMQL------AAAKNTATTEDEYLAVIRGKTAEL 186
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
ACE G ++A + E+ R FG NLGI FQL DD+LD K
Sbjct: 187 FAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAK 234
>gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
Length = 336
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 15/227 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ ++ ++ D + + A GGK++R L A L
Sbjct: 22 VADDMNAVNQVIIDRMRSEIPLIPQL-------AGHLISGGGKRMRPMLTLASAQLLGYR 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AA+E IH +L+HDD+ +D +RRG+ T +I + +++ G+ L + +F
Sbjct: 75 GTSHHVLAAAVEFIHTATLLHDDV--VDGSDLRRGRRTANIIWGNPASVLVGDFLFSRSF 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + NI S + Q ++ + E + I KT AL
Sbjct: 133 QLMVDAGSLKVLNILSGASAVIAEGEVNQL------TAVRQVGLPEERYLSIIDAKTAAL 186
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AC A++A + E+ L +G NLGI FQL DD +D D
Sbjct: 187 FAAACRIAAVVAERPEAEELALEAYGRNLGIAFQLIDDAIDYVSDAG 233
>gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
Length = 323
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + K +D ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADADMKAVDQLIYKQLESDVALINQLGFYIING-------GGKRMRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L++ A +E IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIAYEGEAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ K+ + + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELKSMEVLEVLADATNVLAEGEVLQLMNCNDPDTSE------ESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A +S + L +G+ LG FQL DDLLD D
Sbjct: 166 VIYCKTAKLFEAATRLAGVLAESSIEVQTALADYGKYLGTAFQLTDDLLDYTADTE 221
>gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu50]
gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus N315]
gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu3]
gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus str. CF-Marseille]
gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus Mu50-omega]
gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9781]
gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9763]
gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9719]
gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9299]
gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A8115]
gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6300]
gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6224]
gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5948]
gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5937]
gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
A8117]
gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus 132]
gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus MR1]
gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus N315]
gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu50]
gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
subsp. aureus Mu3]
gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9781]
gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9763]
gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9719]
gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A9299]
gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A8115]
gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6300]
gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A6224]
gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5948]
gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus A5937]
gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II
[Staphylococcus aureus subsp. aureus TW20]
gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
A8117]
gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
aureus 04-02981]
gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit
2) (Spore germination protein C3) [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus CGS03]
gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus CGS01]
gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
aureus subsp. aureus T0131]
gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21189]
gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus 21172]
Length = 319
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKDSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2]
Length = 324
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
++ + ++ ++ + + + Y + GGK++R L A +
Sbjct: 11 NDDMQAVNHLIQQQVDSDVALINQLGF--------YIVNSGGKRLRPLLTVLSARAMGIE 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F
Sbjct: 63 NADHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETANAVFGNQASVLVGDFLYTRSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ S K +I S+ + LQ M + + F + KT L
Sbjct: 121 QMMVSLKRMRVMDILSEATNQIAEGEVLQLMNCNDASTTE------ARYFDVIYGKTARL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + A++ +N + ++ +G++LG FQLADD+LD D
Sbjct: 175 FEAATQLAAVLTDQPENVEHAMQEYGKHLGTAFQLADDILDYMADS 220
>gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
Length = 265
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 9/207 (4%)
Query: 40 LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR----VGAAIECIHCYSLIHDDLPS 94
A+ YA++ GGK+IR L+ LF N+ + + AA+E IHCYSL+HDDLP+
Sbjct: 2 AEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLPA 61
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHN 153
MDN RRGK TVH +Y+E ++ G+ LLT AF I+++ K+ K+ I LS
Sbjct: 62 MDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKSLGDKNKIELISKLSEYAG 121
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
++ +++ ++ + I KTG L+ A E I + ++E++ +
Sbjct: 122 FFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMVEY 181
Query: 214 GENLGIIFQLADDLLDCEE---DLPKK 237
+ LGI FQ+ DD+LD E ++ KK
Sbjct: 182 SKLLGIAFQIKDDILDIEGNFEEIGKK 208
>gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
Length = 353
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
RI+ L + + QT H+ + LLSA GGK++R L CA++ +
Sbjct: 42 LARIEERLAEAIAQTD-HLADVASRHLLSA------GGKRVRPLLALLCAAVDGEINDEV 94
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +E H +L HDD+ MD+ RRG + + + AI+ G+ + + A ++S
Sbjct: 95 IEAAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVS 152
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ + + L + ++ + + KTG+L+ A
Sbjct: 153 ELGTRP-------MKIQSQTFERLVLGQLFETTGPREGQDLLDHYIAVIEGKTGSLIAAA 205
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E G++++ AS++ ++ +GE +G+ FQLADD++D D K
Sbjct: 206 GEYGSLLSGASEDIISMVKAYGELVGVAFQLADDVIDIVSD-GK 248
>gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
ghanaensis ATCC 14672]
gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 324
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 79/218 (36%), Gaps = 8/218 (3%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
LL + L A AL GK +R L E A L A IEC
Sbjct: 15 LLEAELLRWVGSGDSLLEVACLDALFPPGKLLRPILCMESAKAVGGTAEQVLAFAAGIEC 74
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+H SLIHDD+ D R E G + A + P ++
Sbjct: 75 LHVASLIHDDIVDQDPVRRGRASTAEQYGLAEALVAGDGLSMAGIAAMLSGGPAERVLHA 134
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
R + G+ + D V + KT AL AC++GAI+A
Sbjct: 135 ARVTVEALRHMCQGIMR----ETEIRGDLTCAVPTVLNVIHDKTAALTGAACQAGAILAG 190
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A+ + + L +GE LG+ FQ+ DDLL + K
Sbjct: 191 ATPGQTQALHQYGEQLGMAFQIRDDLLPYTAEDQITGK 228
>gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
Length = 327
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++T LL A GGK+IR L A +
Sbjct: 7 IQQDLKDEVTKLNDLIISCLKSDEELIETVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I + I K K
Sbjct: 118 SQSFKLMVA-----SGSIKAMNVLAKASAIISEGEVIQLVKLNERRIITIDEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L +CE GAI+A + + +R FG+ LG IFQ+ DDLLD
Sbjct: 173 TAELFGASCEVGAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLDYLG 220
>gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
Length = 340
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + +R++ + + + N + S GGK++R L CA
Sbjct: 20 DLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACAD 72
Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+
Sbjct: 73 LCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q ++ E + + +
Sbjct: 131 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TAAKNIETSEDEYLAVIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L ACE G ++A ++E+ R +G NLGI FQL DD+LD
Sbjct: 185 GKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGSSA 237
>gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 394
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 24/242 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIRSFL 57
L+ +D L + M+ A+ + A GK IR L
Sbjct: 65 LERARASVDPELRRAVDSLPGSMRRI-------ALHHFGWEHADGTPAAGNAGKAIRPAL 117
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V +A+R AA+E IH ++L+HDD+ MD RR +PT + + AI
Sbjct: 118 VLAAVRALGGPQSSAVRAAAAVELIHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAI 175
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ L A +++ ++L + Q M + +
Sbjct: 176 LAGDALQALAHRLLAEDPHPASAAAAARLAACVIELCAGQH-ADTAMERRGPGEVTLDEC 234
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+ + KTGAL+ AC GA+ A A + + E L FG G+ FQL DD++ D
Sbjct: 235 LAMAEAKTGALLGCACALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVIGIWGDPSRT 294
Query: 235 PK 236
K
Sbjct: 295 GK 296
>gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
Length = 312
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 16/226 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ L+ +R + L +L+ ++ H D + GGK+IR LV +
Sbjct: 2 TDLEAPLRRFEEALSELVQSDVLFIRLIHQDLV-------TAGGKRIRPRLVFLASRALG 54
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A+ +S +D+ RRGK +Y ++++G+ LL+
Sbjct: 55 GAPFELE---LALAVELLHSATLLHDDLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+I+ +++ +L+ LQ + + + I KT
Sbjct: 112 LLHVIAKTGRMELVERFAEVAKTLSEGEVLQFQVAALEDYSLENY------ERIITAKTA 165
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
LM A E A++ A +E L +G G FQ+ DD LD
Sbjct: 166 VLMALATEGPALLLGAESRVREALYRYGLLYGQAFQMRDDYLDLMG 211
>gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50]
Length = 286
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 45 YALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
Y + GG K+IR + A + + A IE IH +L+HDD+ +D +RRG
Sbjct: 1 YIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRG 58
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
K T + + +++ G+ + T AF++++S + + S+ + + LQ M
Sbjct: 59 KATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVND 118
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
++ ++ + KT L A + I+A + E++ L+ +G LG FQL
Sbjct: 119 PDITEENYMR------VIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQL 172
Query: 224 ADDLLDCEED---LPK 236
DDLLD D L K
Sbjct: 173 IDDLLDYNADGEQLGK 188
>gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3]
Length = 337
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E+ KR++ ++ + + + N + S GGK+IR + A +F
Sbjct: 24 KEDMKRVNQLIISMAKSNVTMIPEISNYLISS-------GGKRIRPMITLATAHMFEYQG 76
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T I + +I+ G+ LL AF+
Sbjct: 77 DEHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARILWGNQASILVGDFLLGQAFK 134
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + +Q ++ + + I K KT AL
Sbjct: 135 MMVDVGSLEALSVLSNAAAIIAEGEVMQL------SAAKNIETNVSDYLKIIKAKTAALF 188
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E G I+A E+ L +G +LG+ FQL DD+LD + L K
Sbjct: 189 SAAAEIGPIIAGYGHEERSALHQYGLSLGLAFQLIDDVLDYSSNTQYLGK 238
>gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
NRRL 2338]
Length = 370
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 81/243 (33%), Gaps = 22/243 (9%)
Query: 15 RIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
R+ L D L + + + +R+ L GGK+IR
Sbjct: 20 RVQETLADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTFAWWGWRAAGGAADG 79
Query: 72 ALRVGAAI-----ECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQYD 112
E + +L+HDDL + + + Q+
Sbjct: 80 PQAQAMLRAASSLELLQACALVHDDLIDDSDTRRGNPTVHQAFAALHRHQRWNGEDRQFG 139
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
AI+ G+ L +A +++ + + R L G + ++ +
Sbjct: 140 MAAAILLGDLALAWADDMLHASGLPPEAMARGLRPWRAMRTEVLAGQYLDLLGPVRGDET 199
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + + + E GA +A A + E LR FG ++G+ FQL DDLL
Sbjct: 200 PQAALRIDELKSASYTVQRPLELGAELAGADETALEALRRFGSDIGVAFQLRDDLLGVFG 259
Query: 233 DLP 235
D
Sbjct: 260 DPE 262
>gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 346
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 89/233 (38%), Gaps = 17/233 (7%)
Query: 7 SKLQE-NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
++L + + +D ++ D + + + + ++SA GGK++R L A
Sbjct: 24 ARLAKVDMAAVDALILDRMQSSVPVIP-LLAEHIVSA------GGKRLRPLLTIAAARSA 76
Query: 66 NVNHLTALRVGAAIECI---HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A A ++ +D RRGK H+ + T+++ G+
Sbjct: 77 TADRPDADLTAALKLAASVEFIHTATLLHDDVVDGSERRRGKVAAHLIWGSATSVLVGDF 136
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AFE++ I +Q + LQ D +D+ I
Sbjct: 137 LFARAFELMVETDQIRALGILAQASSVIAQGEVLQL------TRAHDLNLDQETYLRIIS 190
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A ESGA+ A LR +G NLG+ FQLADD LD
Sbjct: 191 AKTAELFAAAAESGAVGVGADPKTTSALRSYGLNLGLAFQLADDALDYGGSSE 243
>gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40]
gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40]
Length = 320
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+QE+ ++T++ + L ++ Y + GGK++R LV A
Sbjct: 3 SFYKVVQEDFAEVNTLIVNQLHSDVGLVENIG--------HYIVDAGGKRLRPLLVLLTA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N L + A IE IH +L+HDD+ +D +RRG+PT + + +++ G+
Sbjct: 55 RALGYNGNQHLSLSAIIEFIHTATLLHDDV--VDVSALRRGRPTANANWGNAPSVLVGDF 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ + ++ Q + + ++ +
Sbjct: 113 LYSRAFQMMVEIGEMGIMKELANTTNVISEGEVQQLVNARNPEVTEQNYMT------VIH 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL ACE+ AI+A A + +R +G +LG+ FQL DD+LD + D
Sbjct: 167 KKTAALFEAACETAAILAGADAATCKAVRSYGYHLGVAFQLVDDVLDYQGDAE 219
>gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
Length = 314
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 16/225 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+ R + L +L+ ++ H D + GGK+IR LV +
Sbjct: 5 DLEAPLNRFEEALSELIASDVLFVRLIHQDLV-------TAGGKRIRPRLVFLASRAIGG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A+E +H +L+HDDL +D+ RRGK +Y ++++G+ LL+
Sbjct: 58 APFEME-LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRL 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ +Q+ +L+ LQ + + + I KT
Sbjct: 115 LHVIAKTGRMELVERFAQVAKTLSEGEVLQFQVAALEDYSLENY------ERIITAKTAV 168
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
LM + E A++ +E L FG G FQ+ DD LD
Sbjct: 169 LMELSTEGPALLKGVDGEVREALARFGLYYGQAFQMRDDYLDLMG 213
>gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
SS9]
gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
SS9]
Length = 323
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 101/239 (42%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +D + L + + Y + GG K++R LV
Sbjct: 1 MDFKAIQALTANDMAGVDAKIQAQLNSDVALINQLGF--------YIVSGGGKRLRPMLV 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A +E IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKDTANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ +I S+ + Q M +D ++
Sbjct: 111 VGDYIYTRSFQMMTSLRSLKILDIMSEATNVIAEGEVQQLMNCNDPNTTEDNYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + AI+ +S + L+ +G LG FQL DD+LD D K+
Sbjct: 166 -VIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVLDYVAD-GKE 222
>gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
Length = 323
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GK+IR +V + + +
Sbjct: 11 VEADL-QLLTNNLKQLVGARHPILYAAAEHLFRVKGKRIRPAIVLLISRTTMLTQEITPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D IRRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDIVDESEIRRGVPTVHSLFTNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSKVIMDLAEGEIQQGLHRFNTDLSI------EAYLEKSYYKTSSLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++ AI++ + + +G +G+ FQ+ DD+LD L K
Sbjct: 184 KAAAIISDVPPEIVQDMYYYGRYIGLAFQIVDDILDFTSATESLGK 229
>gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
Tucson]
gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
Tucson]
Length = 333
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + + ++ ++ + + L + + + GGK+IR +
Sbjct: 11 MNLEQITALTAQDMMAVNAAILEQLHSDVTLINQLCYYIISG-------GGKRIRPMIAV 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 64 LAARALNYEGNKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLV 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++S K+ + S+ + + LQ M ++ D I E
Sbjct: 122 GDFIYTRAFQMMTSLKSLRVLALMSEAVNVIAEGEVLQLM------NVHDPDITEESYMQ 175
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A +S AI++ A+Q E++ L+ +G LG FQL DDLLD + L K
Sbjct: 176 VIYSKTARLFEAAAQSSAILSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSANGSTLGK 235
>gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
Length = 376
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 86/270 (31%), Gaps = 35/270 (12%)
Query: 1 MNGGLPS--KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRS 55
M +P+ L E ++ L + + +A + L GGK+IR
Sbjct: 1 MTSTIPTPTSLDEVPAAVEARLREFFAAALPVAEAISPAVGAAAEVVRDFVLQGGKRIRP 60
Query: 56 FLVTECASL---------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
V LRV AA+E + +LIHDD+ + R
Sbjct: 61 VFVYAGWRCGISARAAGADAAEAADTLRVCAALELVQACALIHDDIIDRSDTRRGRPTVH 120
Query: 107 VHIQYDEVTAIIAGNG-----------------LLTYAFEIISSPKTQLKDNIRSQLMLS 149
++ +G+ ++ D +
Sbjct: 121 RDFEHRHRDRQWSGDPGGFGVAAAILAGDLALAWADDLVHGLAPGAAPDDDATPLPAPVG 180
Query: 150 LTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
T +LGGQ LDI + + + +++ + E GA MA A +
Sbjct: 181 ATWASMRTEVLGGQYLDIVNEAAGDESVQAAYQVMEYKTAAYTVARPLELGARMAGAPAD 240
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
LR G +LGI FQL DDLL D
Sbjct: 241 LIADLRSVGHDLGIAFQLRDDLLGVFGDPA 270
>gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336]
gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336]
Length = 330
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
MN + S ++ + +++ + L + + Y + GGK+IR +
Sbjct: 8 MNIHAIQSLIKTDMDKVNATILAQLNSDVALINQLGY--------YIVQSGGKRIRPMIA 59
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A N + A +E IH +L+HDD+ +D +RRG PT + ++ +++
Sbjct: 60 LLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTANAEFGNAASVL 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ + I S + Q M +D ++
Sbjct: 118 VGDFIYTRAFQLMTKLNSLRILQIMSDATNIIAEGEVQQLMNVNDPETSEDNYMK----- 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + AI A ++ ++ L+ +G LG FQL DD+LD + L
Sbjct: 173 -VIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSANAATLG 231
Query: 236 K 236
K
Sbjct: 232 K 232
>gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
Length = 315
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 84/229 (36%), Gaps = 18/229 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN--HL 70
+ + + + + + GGK++R L + L
Sbjct: 1 MQACNRAIIARMESPVPLIPQLGAHLVA-------AGGKRLRPLLTLASSRLCGYKSTPE 53
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
VG A ++ +D +RRG + + + +++ G+ L +F++
Sbjct: 54 NQRHVGLAACVEFIHTATLLHDDVVDESNLRRGLASANAVFGNKASVLVGDFLFARSFQL 113
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+++ + I S ++ LQ + + + + KT AL
Sbjct: 114 MTADGSLKVMAILSDASATIAEGEVLQMVTQNDLSTPV------DRYLEVIHGKTAALFA 167
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AC GA++A + E+ L FG NLG+ FQL DD LD D L K
Sbjct: 168 AACRVGAVVADRPEAEELALDRFGTNLGMAFQLVDDALDYAADQQILGK 216
>gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus
haemolyticus JCSC1435]
gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus
haemolyticus JCSC1435]
Length = 318
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 88/237 (37%), Gaps = 24/237 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN + + ++ L + ++ L A + L GGK++R V
Sbjct: 6 MNSEIKN--------VEKRLQKAIES--------NDPILREASSHLLSSGGKRVRPAFVI 49
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ F T A+ + +D RRG+ T+ ++D TAI+
Sbjct: 50 LSSQ-FGPQKKTEDTYRVAVALELIHMATLVHDDVIDKSDKRRGRLTIVKKWDVTTAILT 108
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
GN LL E +S + +I S ++++ Q ++
Sbjct: 109 GNFLLALGLEHLSEIRDNRIHHIISNSIVNVGLGELFQFQDQFNSEQSITNYLRR----- 163
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L+ A E GAI + A+ +L+ G +G+ FQ+ DD+LD K
Sbjct: 164 -INRKTALLIQLATEVGAITSEANDETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219
>gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
G9241]
gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
4342]
gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
G9241]
gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
4342]
gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 320
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 357
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 15/234 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + L ++ +++ + + + A GGK++R + A
Sbjct: 31 ALVNLLADDMAQVNETIMARMTSDVPLIPQL-------AGHLITSGGKRMRPLMTLAGAR 83
Query: 64 LFNVNHLTALRVGAAIECI--HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + N + + +S +D +RRG+ T + + +++ G+
Sbjct: 84 IASPNTTSCSVAAIKLATAVEFIHSATLLHDDVIDESNMRRGQDTANALWGNDASVLVGD 143
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AFE++ S +T Q + G +
Sbjct: 144 FLFARAFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNPDTRL------EDYLDVI 197
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A SGA ++ A + + + +G NLG+ FQ+ DD LD D
Sbjct: 198 EGKTAILFAAAAASGARISGADEQITQAMHMYGLNLGLAFQIMDDALDYTADSA 251
>gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
str. F0039]
gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
str. F0039]
Length = 325
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L K I L+ + + ++ Q + L + + GK++R L+ A F
Sbjct: 3 YLSVIKKPITDELNHFIELFNTSLEHQ-DGLLSQVLMFIKQRSGKRMRPMLMLLVAKAFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+
Sbjct: 62 RVSEVTQHAAIGLELLHTASLVHDDV--VDESGERRGQASVNAFYDNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S + + ++L +L+ LQ + + + K KT
Sbjct: 120 ALLHVSFTSSDRIVSGLAELGRTLSDGEILQLENISNQTISE------EAYYEVIKRKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL E GA+ AS+++ E+ R FG +LG+ FQ+ DD+ D E D+ K
Sbjct: 174 ALFEACTEIGALSVGASKDDVEQARLFGLHLGMAFQIRDDIFDYYESNDIGK 225
>gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
Length = 323
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 12/226 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL ++ + L +A + GGK+IR +V A + R
Sbjct: 11 VEADL-ALLTDNLKNLVGARHKILYAAAEHLFGAGGKRIRPAIVLLLARATQPDQGITGR 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D RRG TVH ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESSTRRGVDTVHSRFGNKVAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ KT L+ +
Sbjct: 130 LDNLEVVKLLSRVIMDLAEGEIRQGLKHFDTTLTI------DAYLEKSYYKTATLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ +++ S + E L FG +LG+ +Q+ DD+LD L K
Sbjct: 184 KAVGVLSEVSDHMAENLYQFGRSLGLAYQVVDDILDFTSSDDVLGK 229
>gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 330
Score = 97.2 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRHRLASDVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A + + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAE 229
>gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 328
Score = 97.2 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 20/233 (8%)
Query: 17 DTILDDLLLQTASHMQT--------QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ ILDD++ S M+ I + + GGKK+R LV + N
Sbjct: 9 NDILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNY 68
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++V A++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT A
Sbjct: 69 SGEDRVKVAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLA 126
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F + +I S SL + Q I+ + D I KT +
Sbjct: 127 FRWLIECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFD------IIGKKTAS 180
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L CE+ +++++A+ NE ERL+ FG N G+ FQ+ DD LD D K+
Sbjct: 181 LFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQ 233
>gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 337
Score = 97.2 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 90/241 (37%), Gaps = 25/241 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +L ++ L D + A + + L+ A GGK++R L
Sbjct: 12 DPDLAERLGVRLAYVEERLRDSVTH-ADELANTTSRHLVDA------GGKRLRPLLALLT 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + +E H +L HDD+ MD+ +RRG P H + AI+ G+
Sbjct: 65 AELGESARPEVIDAAVVVELTHLATLYHDDV--MDSAPLRRGAPAAHEVWGNSVAILTGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
L A ++ + + GQ+ + + +
Sbjct: 123 LLFARASVTVA----------GLGPEAVRWQAETFERLCLGQLHETVGPRPDEDPVQHYL 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT +L+ + GA A E + FGE +G+ FQLADD++D D
Sbjct: 173 QVLSDKTASLIATSARFGARYAGCRPEIVEIVANFGEKVGVAFQLADDVIDLTSDGALTG 232
Query: 236 K 236
K
Sbjct: 233 K 233
>gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
DSM 15434]
gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
DSM 15434]
Length = 368
Score = 97.2 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 15/235 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L ++ + ++T L ++ + L A GGK++R L
Sbjct: 9 TPELEGRISPALEAVETRLLQVVNNADETINPPT-SHLAEA------GGKRLRPVLTLLT 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + T +V A + + MD+ +RRG P+ + AI+ G
Sbjct: 62 AQLGDPQTATGEKVRDAGVAVELTHIATLYHDDVMDDAPLRRGAPSAQTVWGNSAAILTG 121
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L+ A +++++ + + + L +
Sbjct: 122 DVLVARASQLVAALGPEAVLAHAKTFERLCMGQLH-------ETLPRPVGTDPVAHYIQV 174
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA++ A + + + FGE +G+ FQLADD++D D
Sbjct: 175 LADKTGSLIAVSARYGAMLTEAGEETERIVEEFGEKIGVAFQLADDVIDLTSDSE 229
>gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
Length = 322
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 10 VADDFSAVDEIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGKALGRE 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L + +F
Sbjct: 63 GDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFLYSRSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I S+ + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMQILSKATRVIAEGEVLQL------SRVRDASTTEEVYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A +A A+ ++E LR FG++LG+ FQL DDLLD + D L K
Sbjct: 175 FEASTHSAAALAEATDAQREALRTFGDHLGVAFQLVDDLLDYKGDSQTLGK 225
>gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus aureus subsp. aureus CGS00]
Length = 319
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ K+++ L+ + S ++ +++ GGK++R V +
Sbjct: 6 MNNEIKKVEQRLEKAIKSKYSVLEQ-------ASLHLLSSGGKRVRPAFVILSSQFGKDE 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ + +D RRGK T+ ++D+ TAI+ GN LL
Sbjct: 59 QTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E + + K + S+ ++ + Q ++ KT L
Sbjct: 119 EHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRR------INRKTALL 172
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + E GAI + + + +L+ G +G+ FQ+ DD+LD K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220
>gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
Length = 340
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + +R++ + + + N + S GGK++R L CA
Sbjct: 20 DLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACAD 72
Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+
Sbjct: 73 LCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q ++ E + + +
Sbjct: 131 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TAAKNIETSENEYLAVIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L ACE G ++A ++E+ R +G NLGI FQL DD+LD
Sbjct: 185 GKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSA 237
>gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
Length = 343
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 14/229 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ Q ++ + ++ A+ Y + GGK++R + A ++ AL A +
Sbjct: 13 REIDEQLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACGGDYRVALPAAAIV 72
Query: 80 ECIHCYSLIHDDL----------PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
E IH YSLI+DD+ P++ Y + I Y E AF
Sbjct: 73 ELIHNYSLIYDDIIDEALLRRNKPTVRAKYGDYAAILIGIWYREAIEEAILETRDPIAFA 132
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ + D +L + + + +KT A
Sbjct: 133 RETANTIRAIDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEALYNTYVKMISLKTAA 192
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ A GA+ A+A + + L +G LG+ FQ+ DD+LD D+ K
Sbjct: 193 LIRTAAVFGAMSANA-PHCIKPLSDYGTYLGLAFQVLDDILDIFGDVKK 240
>gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
DSM 15436]
gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
DSM 15436]
Length = 332
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 25/244 (10%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M L + L + +R++ +L + + + + L +A GGK++R LV
Sbjct: 3 MTQEQLEALLGADMERVEDLLYKSVT-GSGALVDELTSHLSNA------GGKRMRPLLVL 55
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
CA L + + + + V A + L MD+ RRG P Q+ AI+
Sbjct: 56 ICAQLGSPSQVASQDVIDAATAVELTHLATLYHDDVMDSAPQRRGVPAAQHQWGNNRAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L A +++ R H + + GQ+ + D V
Sbjct: 116 AGDVLFARASRLVA----------RLGQRTIDYHAQTFERLCIGQLNETFGPETDFDPVE 165
Query: 179 MIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
K+ KTG+L+ A GA A+ E + +GE +G+ FQLADD++D D
Sbjct: 166 FYIKVLSDKTGSLINTAAVFGAWHGGATDEVAEAVGVYGERIGVAFQLADDVIDLTSDGS 225
Query: 234 -LPK 236
K
Sbjct: 226 VSGK 229
>gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
10987]
gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
10987]
Length = 320
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D D + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYDYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5]
Length = 344
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
LQ++ + + + + A GGK++R L A L
Sbjct: 30 LQDDLTETNRTILARMASDVELIPQL-------AAHLIAAGGKRLRPLLTLAAARLCGYR 82
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A +E IH +L+HDD+ +D +RRG + + + +++ G+ L AF
Sbjct: 83 GERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASANAVFGNKASVLVGDFLFARAF 140
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I ++ LQ D D + F + + KT AL
Sbjct: 141 ELMVEDGSLDVLRILCNASATIAEGEVLQL------TTQNDLSTDIPRYFKVIEGKTAAL 194
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
ACE G ++A L C+G LG+ FQL DD LD D L K
Sbjct: 195 FAAACEVGGVVADRDSAVCGALACYGAALGMAFQLVDDALDYAADQNELGK 245
>gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
NSW150]
Length = 322
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + E+ + ++ ++ + + + N + S GGK++R LV +
Sbjct: 6 LRNLVSEDFEAVNHLIIETIKSPIQLIDDIANHVIQS-------GGKRLRCLLVLLASRA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A IE H +L+HDD+ +D+ +RRG+ T + + +I+ G+ L
Sbjct: 59 CGYEGKEHIMLAAMIEFFHTATLLHDDV--IDDSTLRRGRDTANKIWGNKASILVGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T E++ + + + Q + + + + F + + K
Sbjct: 117 TKYLELMVEVGDIDIIQLLIGIAPQMGCGEIQQF------SNRHNADLSVEEYFDMIRAK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
T L + GA+++ + ++ + +G +LG FQL DD LD D
Sbjct: 171 TALLFAASSAIGALISKSEHQIQKAMYSYGLHLGNAFQLIDDALDYCSDA 220
>gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 10/229 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
++ I++ ++D+ + M++ + Y + GGK++R L A
Sbjct: 2 DIKAIQALIESDMNDVNQLIHAQMRSDVA-LVNQLGLYIVSSGGKRVRPMLAILAAKALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T
Sbjct: 61 YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + LQ M + + KT
Sbjct: 119 SFQLMVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTE------ASYMQVIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L A AI+ Q + L +G +LG FQL DD+LD D
Sbjct: 173 KLFEAATGLAAIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAE 221
>gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 333
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L ++ ++ +L D + + + A R+ GGK+ R +V
Sbjct: 14 DPDLEIAVRAGLTGVERVLRDAIRSEFAF--------VTEASRHLTDAGGKRFRPMVVLL 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + ++ AAIE H +L HDD+ MD +RRG + + ++ AI+ G
Sbjct: 66 AAHFADPAAPEVIQAAAAIELTHLSTLYHDDV--MDEAPLRRGAASANARWTNTVAILVG 123
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A EI + + + L + + + +
Sbjct: 124 DYLFARASEITADLGPE-------ATRILAQTIATLCEGQIRETVGPMPDDDPVEHYLRV 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT +L+ + GA+M+ A + L FGE +G+ FQL+DD++D D K
Sbjct: 177 VTGKTASLIAASGRLGAMMSGADPVTADILATFGERIGVCFQLSDDIIDVSSATADSGK 235
>gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
Length = 344
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
LQ++ + + + + A GGK++R L A L
Sbjct: 30 LQDDLTETNRTILARMASDVELIPQL-------AAHLIAAGGKRLRPLLTLAAARLCGYR 82
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A +E IH +L+HDD+ +D +RRG + + + +++ G+ L AF
Sbjct: 83 GERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASANAVFGNKASVLVGDFLFARAF 140
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I ++ LQ D D + F + + KT AL
Sbjct: 141 ELMVEDGSLDVLRILCNASATIAEGEVLQL------TTQNDLSTDIPRYFKVIEGKTAAL 194
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
ACE G ++A L +G LG+ FQL DD LD D L K
Sbjct: 195 FAAACEVGGVVADRDSAVCGALAGYGAALGMAFQLVDDALDYAADQNELGK 245
>gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1]
gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter sp. ADP1]
Length = 325
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +DT +++ + + + ++ A GGK++R
Sbjct: 1 MAIDFKQDILAPVASDFAAMDTFINEGITSKVALVMAVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ A + ++ A IE +H +L+HDD+ +D +RRG+PT + ++ T
Sbjct: 54 MCLLAAKACGSTDLEQHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTANATWNNQT 111
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ G+ L++ AF+++ + S + LQ D E
Sbjct: 112 AVLVGDFLISRAFDLLVDLNDMVLLKDFSTGTCEIAEGEVLQL------QSQHDPETTEQ 165
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI++ + +E LR F + G FQ+ DD+LD D
Sbjct: 166 TYLNIIHGKTSRLFELATEGAAILSG-TPEYREPLRHFAGHFGNAFQIIDDILDYTSDAE 224
>gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase
[Micromonospora sp. ATCC 39149]
gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase
[Micromonospora sp. ATCC 39149]
Length = 658
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 60/246 (24%), Gaps = 22/246 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLT 71
R+D L L + A + +A+ R+ L GGK++R
Sbjct: 313 RTRVDAELAAFLDRQAPDWPDGAPRGVFTALHRFVLAGGKRLRPQFCYWGWRGAGGEDGG 372
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-----------EVTAIIAG 120
+ L D + + G
Sbjct: 373 EDGSPILVASAALELFHAFALIHDDILDRSDRRRGAPSVHRLFADLHARSAWRGDPEAYG 432
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDE 174
++ ++ Q+ + L M + +
Sbjct: 433 RNTALLCGDLCAAWADQMFHECGLRRDELLRGYAVFALMRTEVIAGEYLDLVSGVGDGSV 492
Query: 175 TQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + + + GA +A L FG+ LG FQL DD+L D
Sbjct: 493 ASALTVIRLKAARYTVTRPLQIGAALAGGPPELAAALAEFGDPLGDAFQLRDDVLGVFGD 552
Query: 234 ---LPK 236
K
Sbjct: 553 PQITGK 558
>gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 353
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 85/244 (34%), Gaps = 18/244 (7%)
Query: 7 SKLQENSKRIDTILDDL----------LLQTASHMQTQHNDRLLSAI-----RYALLGGK 51
S L E + ++ ++ L + + + + + GGK
Sbjct: 9 SILSEYVEPVEKAVEKLTPRMFDTGFLVKEFGEPVYRYSPESFTEGLAKPFWELFRRGGK 68
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ R L + A E IH +LI DD+ D +RRG+P +H Y
Sbjct: 69 RWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVE--DGSLMRRGEPCIHRIY 126
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI AGN + + + + + + + L +
Sbjct: 127 GIDIAINAGNAYYYIPAYLAAKKLPKNMATLFLEKYVETMTRLSLGQTMDIVWHRGLVTD 186
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I E + KTGAL FA E AI A + E L FGE +G FQ+ DD L+
Sbjct: 187 ITEEHYLQMAAFKTGALSRFAVELAAIYAGR-GDLLEELGRFGEAVGTAFQIQDDYLNIF 245
Query: 232 EDLP 235
D
Sbjct: 246 GDEA 249
>gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 337
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 15/230 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + + ++ ++ D + + A GGK++R L A L
Sbjct: 19 LLALVADGMNSVNAVILDRMQSRIPLIPAL-------AGHLIAGGGKRMRPMLTLAGAEL 71
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ AA+E IH +L+HDD+ +D +RRGK +I Y ++ G+ L
Sbjct: 72 VGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKAANIIYGNPATVLVGDFLF 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +FE++ + I S +T Q + ++ + + I K
Sbjct: 130 SRSFELMVEDGSIKVLRILSNASAIITEGEVDQLIAQREIETSE------ERYLAIINGK 183
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
T AL AC A++A ++E+ L +G +LG FQLADD +D + D
Sbjct: 184 TAALFAAACRIAAVVAERPEDEELALDAYGRHLGTAFQLADDAIDYDSDA 233
>gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus
thuringiensis str. Al Hakam]
gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus
thuringiensis str. Al Hakam]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 9 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 62 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 120 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 174 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225
>gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
E33L]
gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
E33L]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 9 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 62 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 120 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 174 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225
>gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Ames]
gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. 'Ames Ancestor']
gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0488]
gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0442]
gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0193]
gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0465]
gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0389]
gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0174]
gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
Tsiankovskii-I]
gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
NVH0597-99]
gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB108]
gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
H3081.97]
gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH820]
gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1]
gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB102]
gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CDC 684]
gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1293]
gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0248]
gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CNEVA-9066]
gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A1055]
gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Western North America USA6153]
gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Kruger B]
gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Vollum]
gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Australia 94]
gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
CI]
gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Ames]
gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. 'Ames Ancestor']
gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0488]
gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0193]
gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0442]
gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0389]
gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0465]
gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0174]
gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
Tsiankovskii-I]
gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB108]
gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
NVH0597-99]
gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
H3081.97]
gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH820]
gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1]
gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
03BB102]
gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. CDC 684]
gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1293]
gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. A0248]
gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
biovar anthracis str. CI]
gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 320
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
Length = 322
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++ + ++ ++ L + Y + GGK++R +V A F+
Sbjct: 10 IADDMQAVNGLIQKRLHSDVVLINQLG--------HYIINSGGKRLRPVVVLLSARAFDY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + IE IH +L+HDD+ +D+ +RRG+ T + + +++ G+ L + A
Sbjct: 62 QGSCHIDIATIIEFIHTATLLHDDV--VDSSELRRGQKTANSIWGSEASVLVGDFLYSRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE++ + I ++ ++ +Q + D E + + + KT
Sbjct: 120 FEMMVDVNSMRVMEILARTTNTIAEGEVMQLLNC------HDPDTTEERYLDVIRSKTAK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A + GA+++ E+E + +G +LG FQL DD+LD DL K
Sbjct: 174 LFEAATQLGAVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGK 225
>gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 322
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + S+L E K ++ + + + + + Y GK +R V
Sbjct: 8 NLEIKSELTEVIKIMEKRIKNSNKSIRNILLD---------MIYNS--GKMLRPAFVILA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + AAIE +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+
Sbjct: 57 GKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKDYAVFIGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +F ++S T S+++ + GQ + +I
Sbjct: 115 FLFSESFLLLSDNITVSNLKKVSKVVSKICKGEI------GQFESRHNIYITINDYLRRI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL + GA + ++ + L G N+G+ FQ+ DD+LD
Sbjct: 169 AAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDDILDYTG 219
>gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71]
gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71]
Length = 269
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 9/210 (4%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDD 91
+ RL A Y+L + GK++R L+ A + A AIE IH YSLIHDD
Sbjct: 2 NPTRLNDARSYSLNIPGKRLRPQLLEASARATGNDRAEALAGPSAEAIELIHTYSLIHDD 61
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
LP+MD+ +RRG+PT+H+ +DE TAI+ G+GL AFE+I+ +L R +L+ L
Sbjct: 62 LPAMDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIA-NDDELSTEQRVRLIARLA 120
Query: 152 HNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
G GM+GGQ ++ ++ + + I +KTGAL+ A G I+ +A+ +
Sbjct: 121 KAAGFDGMVGGQGLDIEATNKDLSLDDLKNIHALKTGALITAALVMGGIVGNATDAQLAT 180
Query: 210 LRCFGENLGIIFQLADDLLDCEED---LPK 236
L GE +G+ FQ+ DD++D D L K
Sbjct: 181 LETVGEKIGLAFQIIDDVIDVRSDSSTLGK 210
>gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 289
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 11/236 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECAS--LF 65
+N + ++TI+ +L ++ + ++ +++Y+L GGK+IR L +
Sbjct: 2 KNLEELNTIIGELDSYLSNTFTYVDDSLAKIYESMKYSLFSGGKRIRPLLCMITYNELAE 61
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N L A +E IH YSLIHDDLP+MD+ +RR KPT H Y E AI+AG+GLL
Sbjct: 62 NPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLLN 121
Query: 126 YAFEIISSPK----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
+ E+IS + + + + ++ G+ GM+GGQ+LDI +
Sbjct: 122 MSMEVISKYMESLDDIDELKKCIKALKFIYNSSGVLGMIGGQLLDIDYLNEQYNEELCED 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KT AL+ + +GAIMA +L+ FG+ +G+ +Q DDLLD +DL
Sbjct: 182 MYSLKTAALLKASIVTGAIMAGCDGEIITKLKEFGQYIGLAYQYKDDLLDMNKDLK 237
>gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
Length = 340
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + +R++ + + + N + S GGK++R L CA
Sbjct: 20 DLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACAD 72
Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+
Sbjct: 73 LCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q ++ E + + +
Sbjct: 131 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TAAKNIETSEDEYLAVIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L ACE G ++A ++E+ R +G NLGI FQL DD+LD
Sbjct: 185 GKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSA 237
>gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 356
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 15/225 (6%)
Query: 15 RIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
R++ +L+ + + + + + + A R+ + GGK+ R LV A +
Sbjct: 36 RVEASVLGVLESVEAELRASVASADP-LVTEAARHLVEAGGKRFRPLLVALGAQFGDPTD 94
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +E H +L HDD+ MD +RRG P+ + ++ AI+ G+ L A +
Sbjct: 95 PQVVSAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAAD 152
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
IS+ ++++ L H + + ++ + + KTG+L+
Sbjct: 153 -ISADLGPEAVRLQARTFARLVHGQIAETV------GPRNGQDPVSHYLHVIAEKTGSLI 205
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ G + A AS E L +GE +G+ FQL+DDLLD +
Sbjct: 206 ATSARFGGLFAGASATHTEALAGYGETIGVAFQLSDDLLDIASES 250
>gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++T + + L + Y + GG K+IR + A +
Sbjct: 13 DMANVNTTILNQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALHYEGD 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T +F++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ + S+ + LQ M ++ ++ + KT L
Sbjct: 123 MTGLESLRVLTLMSEATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A A++ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AASQSAAVLADATETQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353]
Length = 291
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 5/218 (2%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIEC 81
L + Q + L I Y++ GGK+IR L+ E F + +V AA+E
Sbjct: 12 LTIEDFYKSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEM 71
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + +++ + +
Sbjct: 72 IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARAELPSQVK 131
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ LSL + + + I + I KTG L+ + + ++
Sbjct: 132 VDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQ 191
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A Q+ +++LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 192 AQQSVQDKLRRIGDLLGLAFQVRDDILDVTASFEELGK 229
>gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
hominis subsp. hominis C80]
gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
hominis subsp. hominis C80]
Length = 318
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 86/236 (36%), Gaps = 22/236 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN + + ++ L + + S +Q +A GGK++R V
Sbjct: 6 MNSEIKN--------VEKRLKNAIKSNDSVLQE-------AAFHLLSSGGKRVRPAFVLL 50
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ F +T A+ + +D RRGK T+ ++D TAI+ G
Sbjct: 51 SSQ-FGPKKITEDTYHVAVALELIHMATLVHDDVIDKSDKRRGKLTIEKKWDITTAILTG 109
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
N LL + +S + I S ++ + Q ++
Sbjct: 110 NFLLALGLKQLSKIEDHRVHTIISNAIVDVCRGELFQFQDQFNSHQNITNYLRR------ 163
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L+ + E GAI + A +L+ G +G+ FQ+ DD+LD K
Sbjct: 164 INRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219
>gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320]
gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320]
gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 21/239 (8%)
Query: 4 GLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
L S ++ + ++ + L S + + GGK+IR +
Sbjct: 2 NLESIIKLTSADMAAVNDAILYQLNSDVSLINQLGYYIISG-------GGKRIRPMIAVL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + V A IE IH +L+HDD+ +D +RRGK T + + +++ G
Sbjct: 55 TGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVLVG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T +F++++ + + S + LQ M D I E +
Sbjct: 113 DFIYTRSFQMMTDLDSMRVLKLMSSATNVIAEGEVLQLMNC------NDPDITEDDYMQV 166
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + AI+ A+ +++ + +G LG FQL DDLLD + D L K
Sbjct: 167 IYSKTARLFEAASHASAILCGATPEQEKAFQDYGRYLGTAFQLIDDLLDYDADNTQLGK 225
>gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 356
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 18/236 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ GLP + ++ L + + A R+ L GGK+ R LV
Sbjct: 33 IDAGLPDSAFRVLEGVEAALRADVASADPF--------VTEAARHLLDAGGKRFRPLLVA 84
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + +E H +L HDD+ MD +RRG P+ + ++ AI+
Sbjct: 85 LGAQFGDPTREQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILV 142
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L A +I + T+ L L + + +
Sbjct: 143 GDYLFARAADISADLGTEAVR-------LQARTFARLVHGQIAETVGPRPGVDPVAHHLH 195
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG+L+ A G + + AS + L +GE +G+ FQL+DDLLD +
Sbjct: 196 VIAEKTGSLIATAARFGGMFSGASPTHTQALAGYGEAIGVAFQLSDDLLDISSEAE 251
>gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium
diphtheriae NCTC 13129]
gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
diphtheriae]
Length = 374
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 73/255 (28%), Gaps = 26/255 (10%)
Query: 8 KLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
E ++ +L + + + + ++ + + Y L GGK+IR
Sbjct: 17 SFSEVPAAVEEVLAEFFEGRKRKVAKIGVPVSNAVELLVEYVLGGGKRIRPTYAWAGFVA 76
Query: 65 FNV----------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + I S P++ R +
Sbjct: 77 SGGLTNKTEDPGAVLTAIGSLELIQACALIHDDIIDASDTRRGNPTVHRVAERTHAESHR 136
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ + A + + S ++GGQ+LDI
Sbjct: 137 LGDSARFGESIAILVGDLAMVWADDMFHNSGLSDAAIRRASNAWRGMRTEVIGGQLLDIY 196
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E + + + + + GA +A A LR +G ++G+ FQL
Sbjct: 197 IESTGSESIELAETVNRFKTAAYTIERPLHIGAALAGADDQTVHCLRNYGRDIGLAFQLR 256
Query: 225 DDLLDCEED---LPK 236
DDLL D K
Sbjct: 257 DDLLGVFGDPSVTGK 271
>gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus halodurans C-125]
gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination
protein C3) [Bacillus halodurans C-125]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + QE+ I+ L++ + ++ L GGK+IR V
Sbjct: 4 ADIYAHFQEDIFTIERELEEAVQARHDILRKASVHLLK-------AGGKRIRPVFVLLAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + +E IH SL+HDD+ +D+ +RRGK T+ Q+D A+ G+
Sbjct: 57 KFGTYDVNVLKHIAVPLELIHMASLVHDDV--IDDADLRRGKKTIKSQWDNRIAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ A + + I S + + Q + K
Sbjct: 115 MFAKAVQTATYFDDPNIHQIISNAINEMCLGEVEQIRDQYNPNQHLRIYFRR------IK 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L+ +C+ GA+ A A ++L FG +G+ FQ+ DD+LD
Sbjct: 169 RKTALLIAVSCQLGALAAKADPAIVQKLYYFGYYVGMSFQITDDVLDFVGTEE 221
>gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
xylaniphila YIT 11841]
gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
xylaniphila YIT 11841]
Length = 323
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + K ++ + D +Q Q+ L+ A+R+ L GK +R L A +
Sbjct: 4 LTQIRKPVEREMKDFESLFGITLQHQNP-LLMIALRHVLSRKGKLMRPILTLLAAKKYGE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + L ++E +H SL+HDD+ +D +RRG+ +V+ D A++ G+ LL+ A
Sbjct: 63 INDSVLHAAVSLEMLHTASLVHDDV--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + ++ ++ L Q+ +++ + I E Q F + + KT +
Sbjct: 121 LKHAAMAGDLRVVDLVAR------LGQTLSDGELQQLSNVKSDEISENQYFEVIRRKTAS 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
L E GA+++ AS+NE RL FG +GI FQ+ DD+ D ++ K
Sbjct: 175 LFAVCAEVGALLSGASENEILRLGEFGTYVGICFQIRDDVFDYYDAEVGK 224
>gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411]
gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411]
Length = 316
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 21/239 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN L ++++ K ++ L L+ ++ + + + GK++R LV
Sbjct: 1 MNIKLKLAIKKDIKAVNEALAVLIKPESNLTRKVYEQVIGD--------GKRLRPLLVLY 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
AS ++ V + + + + +D+ RRGKP H Y A++ G
Sbjct: 53 SASALGIDEPKDALVVGSAVELIHTASLL-HDDIIDDALYRRGKPASHTVYGIKPAVMGG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A+ I+ + L ++ I + +
Sbjct: 112 DYLYSLAYNIVLDYDVDVAK-------AISRAAYILSEGEIEEIEQAFKVNIGFDDYYRV 164
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L+ +CESGAI+A+ + + +G+NLG+ FQ+ DD LD + D L K
Sbjct: 165 IYKKTAVLIEASCESGAILAN--KQFSPVFKEYGKNLGLAFQIKDDCLDYQADPEVLGK 221
>gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268]
gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268]
Length = 357
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGA 77
D L Q + H A+ Y L GGK R+ L+ S + +
Sbjct: 81 FKDYLKQNELKAPSFHP-YFEEALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAM 139
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E IH YSLIHDDLP+MD+ +RRG+P++H +YDEVTAI+ G+ L T AF I +S
Sbjct: 140 ALEMIHTYSLIHDDLPAMDDADLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAASANLS 199
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ I+ L+ G + ++ + ++++ + KTGAL+ A E GA
Sbjct: 200 DEIKIKCIKTLARNAGSGGMVLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFELGA 259
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+ L G LG+IFQ+ DD++D D
Sbjct: 260 IIGGLKDELAHELYKIGLKLGLIFQIEDDIIDATGDEA 297
>gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
Length = 340
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + +R++ + + + N + S GGK++R L CA
Sbjct: 20 DLVSLVAAGMERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACAD 72
Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+
Sbjct: 73 LCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q ++ E + + +
Sbjct: 131 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TAAKNIETSEDEYLAVIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L ACE G ++A ++E+ R +G NLGI FQL DD+LD
Sbjct: 185 GKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDVLDYGGTSA 237
>gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 312
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 12/220 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
LD L++ S Q + Y++ GGK+IR L+ + L
Sbjct: 2 KALDAFLMEQIS----QFEPEIREHAAYSIDTGGKRIRPSLIFFSGWQNDGQVDEKLVRL 57
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AA+ + + MD IRR + TV +Y+ TA++ G+ L ++A + + T
Sbjct: 58 AAVVETVHLATLV-HDDIMDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYLATQFPT 116
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ M + LQ M G F + +KT L +C G
Sbjct: 117 NEVCRDIAVSMRQVCTGEILQTMQRGDPDLDM------ATYFRVIDLKTAELFRVSCHLG 170
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A +A + + FG +LGI +Q+ DD+ D K
Sbjct: 171 ARLAGFEDSYVQAAGAFGRHLGIAYQIYDDMTDLFGSQEK 210
>gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 330
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRHRLASDVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A + + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAE 229
>gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
Length = 312
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 16/226 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ L+ +R + L +L+ ++ H D + GGK+IR LV +
Sbjct: 2 TDLEAPLRRFEEALSELVQSDVLFIRLIHQDLV-------TAGGKRIRPRLVFLASRALG 54
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A+ +S +D+ RRGK +Y ++++G+ LL+
Sbjct: 55 GAPFELE---LALAVELLHSATLLHDDLIDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+I+ +++ +L+ LQ + + + I KT
Sbjct: 112 LLHVIAKTGRMELVERFAEVAKTLSEGEVLQFQVAALEDYSLENY------ERIITAKTA 165
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
LM A E A++ A +E L +G G FQ+ DD LD
Sbjct: 166 VLMALATEGPALLLGAESGVREALYRYGLLYGQAFQMRDDYLDLMG 211
>gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 329
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 15/230 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLVTECASLFNV--- 67
+I ++ D Q ++ +Q L+ I Y ++ GGK++R +V A
Sbjct: 5 KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64
Query: 68 --NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ V A ++ +D +RRGK T + ++ +++ G+ L +
Sbjct: 65 LSETQLSHTVKMASIIEFIHTATLLHDDVVDESDMRRGKKTANEEWGNAPSVLVGDFLYS 124
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+I+ + + I S ++ Q + G + + + KT
Sbjct: 125 RAFQIMVNVGSVPCMEILSNTTNIISEGEVQQLINCGDPDTSE------ESYLKVIQYKT 178
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L A GA++A AS+ ++ L+ +G +G FQL DD++D
Sbjct: 179 AKLFEGAALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAE 228
>gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 340
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 16/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + +R++ +L L + I A GGK+ R +
Sbjct: 22 PELAATVSRDLQRVEELLQKELNHGEDFVNE-------KVIHLAAAGGKRFRPMFAVLAS 74
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A + + + ++ MD RRG + + ++ AI+AG+
Sbjct: 75 QLGTRASCEDVIKAATVVEMTHLATLY-HDDVMDEADRRRGVESANARWGNSVAILAGDI 133
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL +A ++++ T G + + +
Sbjct: 134 LLAHASRLMATLGTDTV--------AHFAQTFGDLVTGQMRETVGPGDGDKIEHYLNVVH 185
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L+ A GA+ S L+ FG +G IFQ+ DD++D
Sbjct: 186 EKTGVLISSAGYLGALHGGCSPEITRALQQFGVYIGTIFQIVDDIIDIFS 235
>gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
Length = 358
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++++ + L + + S GGK+IR +
Sbjct: 36 MDIKTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHS-------GGKRIRPMIAN 88
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A N + A IE +H +L+HDD+ +D +RRG PT + ++ +++
Sbjct: 89 LAAKALNYQDNKHITCAAFIEFLHTATLLHDDV--VDESDMRRGNPTANAEFGNAASVLV 146
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S + Q M + ++
Sbjct: 147 GDYMHTRSFQMMTELGSLRILQVMSAATNVIAEGEVQQLMNVRDPDTTEQNYMK------ 200
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L + ++ AI+A A +E L+ +G LG FQL DD+LD +
Sbjct: 201 VIYSKTARLFEVSTQTVAILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSANAA 256
>gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 9/222 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + + L +A + GK++R +V + N + +
Sbjct: 11 VEEDL-RLLTENLKQLVGARHPILYAAAEHLFGAKGKRVRPAIVLLISRATMPNQEISPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D+ +RRG PTVH + A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDDSDVRRGIPTVHSYFGNRVAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S++++ L QG+ G KT +L+ +
Sbjct: 130 LDNLEVVKLLSEVIMDLAEGEIQQGLNGFDTTLSI------EAYLEKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ ++ S + L +G ++G+ FQ+ DD+LD
Sbjct: 184 KAAGCLSGVSAQLADDLYNYGRDIGLAFQIVDDILDFTGSTE 225
>gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 353
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
RI+ L + + QT H+ + LLSA GGK++R L A++ +
Sbjct: 42 LARIEERLGEAIAQTD-HLADVASRHLLSA------GGKRVRPLLALLSAAVDGEINDEV 94
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +E H +L HDD+ MD+ RRG + + + AI+ G+ + + A ++S
Sbjct: 95 IEAAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVS 152
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ + + L + ++ + + KTG+L+ A
Sbjct: 153 ELGTRP-------MKIQSQTFERLVLGQLFETTGPREGQDLLDHYIAVIEGKTGSLIAAA 205
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E G++++ AS+ ++ +GE +G+ FQLADD++D D K
Sbjct: 206 GEYGSLLSGASEEVISMVKAYGELVGVAFQLADDVIDIVSD-GK 248
>gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 322
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + S+L E K ++ + + + + + Y GK +R V
Sbjct: 8 NLEIKSELTEVIKIMEKRIKNSNKSIRNILLD---------MIYNS--GKMLRPAFVILA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + AAIE +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+
Sbjct: 57 GKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQAKYGKDYAVFIGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +F ++S T S+++ + GQ + +I
Sbjct: 115 FLFSESFLLLSDNITVSNLKKVSKVVSKICKGEI------GQFESRHNIYITINDYLRRI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL + GA + ++ + L G N+G+ FQ+ DD+LD
Sbjct: 169 AAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDDILDYTG 219
>gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Sterne]
gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
str. Sterne]
gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 323
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 9 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 62 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 120 AKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 174 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225
>gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
HTCC2633]
gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
HTCC2633]
Length = 351
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + ++ ++ ++++ + + Q D L++A GGK+IR + A +
Sbjct: 33 LATLASDDMAAVEAVIEERMASATRSIP-QTADYLVAA------GGKRIRPLITVTAARM 85
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + AA+E IH +L+HDD+ +D +RRGK + + +++ G+ L
Sbjct: 86 LGYEGDGHVSLAAAVEYIHSATLLHDDV--VDESELRRGKAPANTVWGNAHSVLVGDFLF 143
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F ++ + ++ S+ + Q +++ I + I K
Sbjct: 144 ARSFMMMVDAGSMDALHVLSRAASVIAEGEVRQL------AAVRNIDISRDEYMSIIDAK 197
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T AL A + I+ + + ++ L +G LG+ FQL DD LD +L K
Sbjct: 198 TAALFSAAAQVAPILYGSDKAIEDGLETYGRELGLAFQLVDDALDYGGMAAELGK 252
>gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 226
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++S + + S+ + + LQ M ++ ++
Sbjct: 111 VGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A + I+A + +++ L+ +G LG FQL DDLLD +
Sbjct: 166 -VIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSAEAS 221
>gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
Length = 278
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG-AA 78
+++ + + + T H + + L GGK+ R L+ +N + + A
Sbjct: 1 MEEFIKKNLIKLNTFHPNFEKALNEMLLAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFA 60
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSLIHDDLP+MD+ +RRG PT+H YDE TAI+ G+GL TYAFE++S
Sbjct: 61 IELIHTYSLIHDDLPAMDDATLRRGHPTLHTTYDEATAILVGDGLNTYAFEVLSKAPIHN 120
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I +LS + + L +++ ++ ++ + KT L+ + + GAI
Sbjct: 121 DIKIELIKILSENAGVSGMVLGQAIDLYFENKKLNLDELKELHINKTAKLIAASLKMGAI 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + + E+L FG LG++FQ+ DDLLD E D K
Sbjct: 181 IVNK-IDLAEKLYDFGIKLGLLFQIQDDLLDLE-DETK 216
>gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium amycolatum SK46]
gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase
[Corynebacterium amycolatum SK46]
Length = 351
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 13/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L + + E ++ + +L L + + + L A GGK+ R
Sbjct: 28 VDEALEATITEGMRKSEDLLITELGRGEDFLAERV-SHLAQA------GGKRFRPMFTML 80
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + A + + + ++ MD RRG P+ + ++D AI+AG
Sbjct: 81 AAQFGETPESDKVITAATVLELTHLATLY-HDDVMDEADKRRGVPSANSRWDNTVAILAG 139
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +++ + + M + +
Sbjct: 140 DYLFAVASRLLAE-----LGSESVAHFAETFGVLVTGQMRECLNDLDLPIEERIERYLKV 194
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L+ A GA A AS + LR +GE +GI+FQ+ DD++D
Sbjct: 195 IAEKTGVLIASAGYLGAYHAGASADISNALRRYGELIGIVFQIVDDIIDISS 246
>gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198]
gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198]
Length = 287
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
E + + L ++ ++ GGK+ R L+ N +
Sbjct: 5 EILREFEEFLQSYPIEMEGF-HPVFAKAFWEMLK---NGGKRFRPALLFAVVCSQNFSLA 60
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A A+EC+H YSLIHDDLP MD+ +RRG PT+H YDEVTA + G+GL T++F
Sbjct: 61 KNAFLPALALECLHTYSLIHDDLPCMDDASLRRGYPTLHRSYDEVTATLVGDGLNTFSFY 120
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ +R MLS IG + +++ ++ +++ I KT L+
Sbjct: 121 LLTKAHLDPSTRLRLIEMLSHYGGIGGMVIGQAMDCYFENQHLEIEKLYAIHLNKTAKLI 180
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ G ++A+ E L FG +LGI FQ+ DD++D
Sbjct: 181 ATSLCMGGVIANLPDGELRNLWDFGMDLGIFFQVRDDIID 220
>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
Length = 287
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL E S + ++D L +H + N + A+ YA+ GGK++R L A +
Sbjct: 2 KLSEFSATVVPQIEDKLAAELAH--STSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYG 59
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ LR +A+E IH YSLIHDDLP+MDN +RRGKPT H + E AI+AG+ L
Sbjct: 60 LGINGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPL 119
Query: 127 AFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A++ ++S T + + + + G+ M I QV I K
Sbjct: 120 AYQWLASDPLLTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYRK 179
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
TGAL+ +A +G IMAHAS KE L FG G+ FQ+
Sbjct: 180 TGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQIK 219
>gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 329
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLVTECASLFN 66
++K + +L D L Q + + Y L GG K+IR L+ A +
Sbjct: 7 ADAKGVFDLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALH 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +R+GA +E +H +L+HDD+ +D RRG+P+ + + ++AG+ L
Sbjct: 67 FRGESRIRLGAVVEMLHTATLVHDDI--IDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQ 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F++ + ++ L + LQ G++++ + F + KT
Sbjct: 125 SFQVAMEERNFHVLDLLISLTQQMVEGELLQIQKLGRLINE-------EEYFDLIFRKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+L + + GA +A A + + +L +G NLG+ FQ+ DD+LD + L K
Sbjct: 178 SLFRVSMQLGAAIADAPKEIEGQLGEYGRNLGLAFQIVDDVLDLTSEESTLGK 230
>gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
Length = 354
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 91/242 (37%), Gaps = 18/242 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
+ +ID + + + + R++ IR Y GGK++R + LF+
Sbjct: 12 VASYKAKIDESISRFFDRKEEETKDVLSKRVIKIIRDYTEGGGKRLRPIFMILGYRLFSP 71
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+IE Y LIHDD+ +D +RRGKP++HI+ ++ T
Sbjct: 72 EEKGIFDASISIELAQSYLLIHDDV--IDKSDVRRGKPSMHIRLEDAFVAGCPQSRSTAE 129
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----------GLQGMLGGQMLDIQDEFIDETQV 177
I + + L ++ GQ LDI +D+
Sbjct: 130 GLAIVAGDLAESYAHEALLRSGFYSENLVKADLELSKTIEMTGYGQFLDILSTTMDDFNE 189
Query: 178 FMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ ++ + GAI++ ++ + LR +G LGI FQL DD+L D
Sbjct: 190 GDLIRLHLWKTAKYTLEGPLAMGAILSG-TEYDITALREYGRVLGIAFQLKDDILGLFGD 248
Query: 234 LP 235
Sbjct: 249 EK 250
>gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus
NVH 391-98]
Length = 320
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V A+E IH SL+HDD+ +D +RRG TV+ + + A+ G+ L
Sbjct: 59 GEYKLDAIKHVAVALELIHMASLVHDDV--IDAALLRRGSATVNANWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNLEVPEAHQALSYTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI + AS++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
Length = 330
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRHRLASDVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A + + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTGTAE 229
>gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Rickettsiella grylli]
gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Rickettsiella grylli]
Length = 294
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
RI+ +L L + L A+ YA+L GGK++R V ++ ++
Sbjct: 7 SYQNRINGLLKQCLSN-----PPPLSKPLYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSL 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ AIE IH YSLIHDDLP MDN RRGKP+ H Q+ E A++AG+ L AF+
Sbjct: 62 QDLDHIACAIEFIHAYSLIHDDLPCMDNDDWRRGKPSCHKQFGEAMALLAGDALQALAFD 121
Query: 130 II--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + ++ + S L ++ + G D + I +KTG+
Sbjct: 122 TLLKAPFQSLKVIKMLSVLTEAVGAQGMVAGQAMDFKDFNALGRSDRSNAENIHALKTGS 181
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L A + AI A Q+ L+ G +G++FQ+ DD+ D
Sbjct: 182 LFGAAFQLPAIAADLPQDHSLTLKNVGHQVGLVFQIQDDICD 223
>gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 394
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 23/252 (9%)
Query: 2 NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
LP + + + L L S + ++ + +A + GGK++R LV
Sbjct: 63 TARLPERVSIASLLDVVSDDLLKLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALVF 122
Query: 60 ----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A + ++ LT A ++ +D+ +RRGK T+H Y
Sbjct: 123 LVSRATAEVAGLSELTTEHKRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRI 182
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+ + + +++ + + SQ++ Q + D +
Sbjct: 183 AVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQQ------STLFDCDVTLD 236
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---- 231
+ KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 237 DYLLKSYYKTASLLASSTRSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILDFTQSAE 296
Query: 232 -------EDLPK 236
DL K
Sbjct: 297 QLGKPAGSDLAK 308
>gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group]
Length = 414
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 21/245 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECA 62
+ + + + L L S + ++ + +A + GGK++R LV A
Sbjct: 90 TSVSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATA 149
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + LT A ++ +D+ +RRGK T+H Y A++AG+
Sbjct: 150 ELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDF 209
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + +++ + + SQ++ Q + D I +
Sbjct: 210 MFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSY 263
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----------- 231
KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 264 YKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAG 323
Query: 232 EDLPK 236
DL K
Sbjct: 324 SDLAK 328
>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
Length = 303
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 119/241 (49%), Gaps = 16/241 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+ LQ+ +RI DDLL + + L SA+ +A+ LGGK++R L A L
Sbjct: 9 ANALQQAQQRIH---DDLLTALDAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATAHL 62
Query: 65 F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
N N R A+E IHCYSL HDDLP MDN +RRG+PT H+ Y E TA++AG+ L
Sbjct: 63 NPNNNAAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGDIL 122
Query: 124 LTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM 179
+ AFEI+ + L M+ GQ+LD+Q E Q
Sbjct: 123 QSMAFEILGSRLFDAGPVVDQGIVLKQMQILATASSKMVCGQVLDLQAEGKRVDQTALEN 182
Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
I + KTGAL+ A A+ + +LR + + +G+ FQ+ DD+LD + L
Sbjct: 183 IHRNKTGALISAAVMMAAVTVFDGCDQAIPKLREYAQAIGLAFQVQDDILDIISNTDVLG 242
Query: 236 K 236
K
Sbjct: 243 K 243
>gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH187]
gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
AH187]
Length = 320
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E I++ + S +L + Q D + + K K
Sbjct: 117 AKSLECITNIEIPEAHQALSYTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 286
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 16 IDTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
++ +L+ S++ + A+ L GGK+ R L+ + N + +
Sbjct: 1 MNRLLETFENYLKSNLPVSKTFHPHFEDALSLMLDAGGKRFRPMLLLSVVNSKNSLLIKS 60
Query: 73 L-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
V +E +H YSL+HDDLP+MD+ +RRG T+H +YDEVTAI+ G+ L T AF I
Sbjct: 61 ALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFETLHKKYDEVTAILVGDALNTEAFNKI 120
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ I +LS I + +++ ++ +Q+ + KT L+
Sbjct: 121 ANAPLSSDVKIECIKVLSSDGGIDGMIIGQAIDCFFENQKLELSQLEFLHIHKTAKLIAG 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + GAI+A+ +E+L FG ++G++FQ+ DD+LD
Sbjct: 181 SLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQDDILD 218
>gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 354
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----- 67
++++ LD L L++A GGK++R L + L +
Sbjct: 31 LEQVEEQLDSALG-FDDLFSDTAAHHLMAA------GGKRVRPVLTVLASLLGDPALASG 83
Query: 68 ---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ R A + + + ++ MD +RRG P H + AI+AG+ +
Sbjct: 84 EVADVDAPARQAAVVMELTHLATLY-HDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIF 142
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A ++++ T+ + ++ GQ+ + + + +
Sbjct: 143 ARASQLMAELGTRPVQ----------IQADTFERLVQGQLWETRGPAEGTDPIEHYYAVL 192
Query: 185 TGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G + A GA++ A + + +R +GE +G+ FQLADDL+D D
Sbjct: 193 SGKTGSLIAAAGMLGALLGGADEAAVQVMRAYGEKVGLAFQLADDLIDLTGDTE 246
>gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
Length = 322
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 18/236 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + I+ LD+ + ++ A L GK+IR L A
Sbjct: 3 ELLAYFKNELPLINGFLDEETSKLEGLVKDV-------ARHVLLAPGKRIRPVLTILSAR 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++E +H +L+HDD+ +D+ +RRG H+ + I+AG+ L
Sbjct: 56 GLGYGKDDIYPLAGSLELLHAATLLHDDI--LDDADLRRGVEASHLVFGTTETILAGDVL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L A +I + ++ + +++ L+ + L ++ I
Sbjct: 114 LALANKIGADYGKPRISSVLASGIMATVEGEILEIAHISEPL------MNRDTYMDIIIG 167
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L+ +C GAI+A + ++ + FG N+GI FQL DD LD E D K
Sbjct: 168 KTARLIETSCRLGAILASDDRAMEDAVGNFGLNMGIAFQLVDDALDYESPSDDTGK 223
>gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 351
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 16/233 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + +R++ + + + N + S GGK++R L CA
Sbjct: 31 DLVRLVADGMERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACAD 83
Query: 64 LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+
Sbjct: 84 LCGYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDF 141
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF ++ + +I S + +Q ++ E + + +
Sbjct: 142 LLGQAFRMMVEVGSLRALDILSAAATVIAEGEVMQL------TAAKNTETSEDEYLAVIR 195
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L ACE G +++ + E+ R +G NLGI FQL DD+LD
Sbjct: 196 GKTAELFAAACEVGPVLSQRPEAEQAACRAYGMNLGIAFQLIDDVLDYGGTSA 248
>gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
Length = 358
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 22/236 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYAL-LGGKKIRSFLVTECASLFNV 67
+ + I+ L+ + SHM D + A RY L GGK++R L A L +
Sbjct: 31 RRFAAAIEEGLEQVEAGLLSHMT--FADEIADATSRYLLEAGGKRVRPVLTLLTAQLGSG 88
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N+ + A+E H SL HDD+ MD +RRG P+ + AI+ G+ L A
Sbjct: 89 NNANVVTAAQAVEITHLASLYHDDV--MDEAQLRRGVPSAQSVWGNSVAILTGDLLFARA 146
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMK 184
++I+ + + + + GQ+ + + T + K
Sbjct: 147 SKLIA----------GLGERALILQSNTFERLCLGQLHETLGPKPGENPVTHYLQVLADK 196
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
TG+L+ A E G + + A +R FGE +G+ FQL DD++D KK
Sbjct: 197 TGSLIATAAEVGVMFSDAPDEYTVPVRDFGEKIGVAFQLIDDVIDLSDETGKTGKK 252
>gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-29]
gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-3]
gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-3]
gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-29]
Length = 320
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ S L+ + I+ L + ++ + +L+ A GGK+IR V
Sbjct: 6 MYSFLRSDINVIEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKF 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L
Sbjct: 59 GDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLF 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ E +++ + S +L + Q D + + K K
Sbjct: 117 AKSLECVTNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 171 TALLIAASCQLGAIAAGANRDMVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222
>gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Halogeometricum borinquense DSM 11551]
gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Halogeometricum borinquense DSM 11551]
Length = 348
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 23/238 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL--- 64
++ + ++ LD+ + +RL A RY L GGK++R + A
Sbjct: 14 VKARRELVNDALDE-------DVPMADPERLYEATRYLLEAGGKRLRPTVTLLTAEALAD 66
Query: 65 -----------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
++ + AA+ S MD+ +RRG P VH +YD
Sbjct: 67 AEPLSEDYRSFPALDGADIDVMAAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHKEYDT 126
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
TAI+AG+ L AFE ++ ++ + + +L+ T +G + +
Sbjct: 127 ETAILAGDTLYAKAFEFMTQTGADPQNGLEAVRLLATTCTKICEGQALDVEFER-RTEVL 185
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + ++KT L A + ++ A E L +G + G FQ+ DD+LD
Sbjct: 186 PDEYLEMVELKTAVLYGAAAATAGVLMGADDETVEALYRYGIDSGCAFQIQDDVLDLT 243
>gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
Length = 338
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q++ +R++ + + + N + S GGK++R + A +F
Sbjct: 25 QKDMERVNQFILSMAKSEIEMIPEISNHLISS-------GGKRLRPMITLASAHMFGYQS 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +I+ G+ LL AF+
Sbjct: 78 DGHIKLATAVEFMHTATLLHDDV--IDESDLRRGKSTARMIWGNQASILVGDFLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ + I KT AL
Sbjct: 136 MMVDVGSIEALSVLANAAAIIAEGEVMQL------SAAKNIKTSSSDYLKIINAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A E+ LR +G +LG+ FQL DD LD +L K
Sbjct: 190 SAAAEVGPIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSGSAQNLGK 239
>gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
Length = 326
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 11/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I+ L D + +H + L + + + GK++R L+ A F
Sbjct: 4 LSLIKRPIEAELGDFI-DLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L +E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A
Sbjct: 63 VSEATLHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S ++ + L +L+ LQ +IQ + I E + I + KT A
Sbjct: 121 LLYVSHTHSEAIVRRLAGLGQTLSDGEILQL------SNIQRKDITEEAYYRIIERKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L GA+ A AS+ E + RCFG+NLGI+FQ+ DD+ D D
Sbjct: 175 LFEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYY-DSE 221
>gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus capitis SK14]
gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Staphylococcus capitis SK14]
Length = 288
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++T L + + + N L ++ Y+L GGK+IR L+ ++ N
Sbjct: 1 MSNLIEEVNTNLKQAIPE------SHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT A
Sbjct: 55 DYHKGFQSALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKA 114
Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++S+ + ++ LS + +++ +D + I K KTG
Sbjct: 115 FELVSNDDLIEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTG 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ FA + +A Q L F ++LG++FQ+ DDLLD D K
Sbjct: 175 ALLTFAVMAAVDIAQVDQKTSHNLNEFSKHLGLMFQIKDDLLDVYGDEKK 224
>gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
Length = 289
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 32 QTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ L +A YAL GGK +R+FLV E A L + AL AAIEC+H YSL+HDD
Sbjct: 24 PRGVSGPLEAASDYALEGGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDD 83
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT-YAFEIISSPKTQLKDNIRSQLMLSL 150
LP+MD+ IRRG+PTVH +DE TAI+ G+ L E+++ + ++ +
Sbjct: 84 LPAMDDDDIRRGRPTVHKAWDEATAILVGDALQALAFEEVLACDAPPERLVALARGLAEA 143
Query: 151 THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
G+ G + + + V IQ KTGAL+ ++ +GA +A A
Sbjct: 144 AGARGMVAGQMLDIAAESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADP---AP 200
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
+G LG+ FQ+ADDLLD D
Sbjct: 201 FARYGAALGLAFQIADDLLDATGDAA 226
>gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
bacterium]
Length = 323
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 17/236 (7%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
MN + L+ + K+ D +L L + + Q + +++A GGK++R L+
Sbjct: 1 MNNFADIQKLLKSDLKKTDKVLIKRLSSNVALIN-QMSSYIINA------GGKRLRPLLL 53
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
CA + IE IH +L+HDD+ +D RRGK T + + +++
Sbjct: 54 LLCAKATGYQGNHHHLMAVVIELIHTATLLHDDI--VDESATRRGKDTANEVWGNAASVL 111
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + AFE++ P + I S+ S+ LQ + + + F
Sbjct: 112 VGDFLYSRAFEMMVEPDSMRIMKILSKTTNSIAEGEVLQLLNCQNSELSE------AEYF 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KT L + + G I+++A + ++ LR +G +LG FQ+ DD LD E D
Sbjct: 166 NVIERKTACLFQASTQIGGILSNADEKQELALRNYGLHLGNAFQIIDDALDYESDA 221
>gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 289
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIH 89
+ + L+ +I Y++ GGK+IR + E F ++ V AA+E IH SLIH
Sbjct: 18 KDLVSPDLIESILYSVDAGGKRIRPLIFLELLEGFGISLTDAHYDVAAALEMIHTGSLIH 77
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DDLP+MD+ RRG+ T H ++DE TAI+AG+ L F+++++ IR LS
Sbjct: 78 DDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLANAALTADIKIRLIAELS 137
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ ++ + +++ +I KTG L+ F + I+A E
Sbjct: 138 HASGTYGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVAAGIVAGVEDEELAN 197
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
LR G +G+ FQ+ DD+LD
Sbjct: 198 LRKTGSLIGLAFQVRDDILDVTASFE 223
>gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 305
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYNQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
Length = 335
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++ + +R++ ++ + + N + S GGK++R L CA
Sbjct: 15 ETLVRLVKGDMERVNALILSRTGSDVAMIPEVANHLISS-------GGKRLRPMLTIACA 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+L + +++ A++E +H +L+HDD+ +D +RRGK + +++ G+
Sbjct: 68 ALSSYEGDGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNEASVLVGDF 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF+++ +I S ++ +Q ++ E + +
Sbjct: 126 LLGQAFKMMVEVGILECLDILSTAACTIAEGEVMQL------AAAKNTETSEDDYLAVIR 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L ACE GA++ + E+ R FG NLGI FQL DD LD K
Sbjct: 180 GKTAELFAAACEVGAVLNARPKAEQAACRSFGMNLGIAFQLVDDALDYGGSQAK 233
>gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
Length = 320
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 17/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ + ++T++ + L ++ +Y + GG K++R L +
Sbjct: 8 IANAFEDVNTLIVEQLRSDVGLVEDIG--------QYIVAGGGKRMRPLLALLTGAALGG 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A IE +H +L+HDD+ +D +RRG+PT + Y ++++ G+ + + A
Sbjct: 60 ISQPHKHFAAVIEFLHTATLLHDDV--VDVSSLRRGRPTANAAYGNASSVLVGDFIYSRA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + + + LQ + G + TQ + + + KT
Sbjct: 118 FQLLVNIGDMRILKDIADTTNRIAEGEVLQLVRAGDADTTE------TQYYEVIQAKTAV 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L AC GA+++ AS+ + E LR FG NLGI FQ+ DD+LD + D
Sbjct: 172 LFGAACYGGALLSGASERKAEELREFGINLGIAFQIVDDILDYQGDPA 219
>gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 383
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 6/191 (3%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R LV ALR AA+E H ++L+HDD+ +D RR +PT
Sbjct: 98 GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 155
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ + AI+AG+ L + A + ++ ++L + Q
Sbjct: 156 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIELCAGQHTDCALEDRAP 215
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + + KTGAL+ AC GA+ A A ++ L FG G+ FQL DD++
Sbjct: 216 TEVSL-DECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDII 274
Query: 229 DCEED---LPK 236
D K
Sbjct: 275 GIWGDPSRTGK 285
>gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 347
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 6/191 (3%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R LV ALR AA+E H ++L+HDD+ +D RR +PT
Sbjct: 62 GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 119
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ + AI+AG+ L + A + ++ ++L + Q
Sbjct: 120 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIELCAGQHTDCALEDRAP 179
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + + KTGAL+ AC GA+ A A ++ L FG G+ FQL DD++
Sbjct: 180 TEVSL-DECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDII 238
Query: 229 DCEED---LPK 236
D K
Sbjct: 239 GIWGDPSRTGK 249
>gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas
haloplanktis TAC125]
gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas
haloplanktis TAC125]
Length = 323
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ I+ ++D+ + M++ + Y + GGK++R L A
Sbjct: 2 DIKAIQALIENDMNDVNQLIHAQMRSDVA-LVNQLGLYIVNSGGKRVRPMLAILAARALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + +E IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T
Sbjct: 61 YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + LQ M + + KT
Sbjct: 119 SFQLMVGLGKMQVMQVLADATNIIAEGEVLQLMNCNDPDTTE------ASYMQVIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A AI+ +Q + L +G +LG FQL DD+LD D L K
Sbjct: 173 KLFEAATGLAAIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNADADQLGK 225
>gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 284
Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 116/233 (49%), Gaps = 18/233 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
M+ + R++ LD L S L AIRY+ L GK+ R L
Sbjct: 1 MDFNI------YITRVNAKLDQHLSAQGS---------LAKAIRYSTLANGKRFRPILAY 45
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A++FN N A+E IH YSLIHDDLP+MD+ IR +P H ++ E AI+A
Sbjct: 46 CVANIFNTNLNLVDSSSCAVEFIHTYSLIHDDLPAMDDDDIRHNQPVCHKRFGEAQAILA 105
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+GL AFE++ + +I+ +L+ SLTH L I + ++ +
Sbjct: 106 GDGLQALAFEVLVNDDLI-SADIKIELLKSLTHASFEMVEGQAIDLSIIAKQVNIATLET 164
Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + KTGAL+ A GAI++ + + L F +++G+ +Q+ DD+LD E
Sbjct: 165 MHRKKTGALLSCAVNLGAIVSKMCNNKDSVILNTFSKDIGLAYQIQDDVLDIE 217
>gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 339
Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
G ++QE+ +R++ +L S + + + + +A A GGK+ R
Sbjct: 12 TGEFAGQVQESLQRVEDLL-------ISELSSGDDILVEAATHLAKAGGKRFRPMFAILS 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ F + +A + MD +RRG P+ + ++ AI+AG+
Sbjct: 65 SH-FGAKPGADEVITSATVIEMTHLATLYHDDVMDEAALRRGAPSANARWSNSIAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S+ + I + L + + D + + +
Sbjct: 124 FLFARASHLVSTLGPE-AVRIIADTFAELVTGQMRETVGVSAGDDPIEHY------LKVV 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
KTG+L+ A GA A A + + L G+ +G FQ++DD++D D K
Sbjct: 177 WEKTGSLIATAGRFGAYTAGADETTVDTLARLGDVVGTAFQVSDDIIDIASVTGDSGK 234
>gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
Length = 296
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
Q+ ++ D L L+ + + RL A+R+ALL GGK++R LV + +V
Sbjct: 8 QQVKQQTDASLLTLIDEL-----PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AIEC+H YSL+HDDLP+MD+ +RRG PT HI +DE TAI+AG+ L AF
Sbjct: 63 KTDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122
Query: 129 EIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + +L+ + L E I ++ + K+KT
Sbjct: 123 TVLADAPLSTYAEAKRPQLLSVLAKSAGYVGMCGGQAIDLASTGESISLDELKRLHKLKT 182
Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAL+ E AI++ K L + ++G+ FQ+ DD+LD K
Sbjct: 183 GALLRACVEMVAIVSEDLLPEAKVDLMAYAADIGLAFQVQDDILDVVGSSEK 234
>gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 293
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 116/246 (47%), Gaps = 20/246 (8%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
M P + L+ ++R++ L A RL+ A RYALLGG K++R L
Sbjct: 1 MTTPFPIEAYLRSVAERVEPR----LAALADARAPGGPSRLVEATRYALLGGGKRMRPAL 56
Query: 58 VTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
V + A +R A+E IH YSL+HDDLP+MD+ +RRG+PTVH +DE
Sbjct: 57 VLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHRAFDEA 116
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
TA++ G+GL + AF + + L+ Q M+ GQ D+ E
Sbjct: 117 TAVLVGDGLQSLAFAHLL------ASPDPAAAPLARLLAENAQLMVEGQARDMAGEHARL 170
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ +++ M+T + A A + E + G LG+ FQ+ADDLLD D
Sbjct: 171 GEAEVMELMRT-KTGALLAAAVAGGARCAGASAEAVYPVGLKLGLAFQIADDLLDLTADA 229
Query: 234 --LPKK 237
L K+
Sbjct: 230 ATLGKR 235
>gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus]
Length = 325
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 22/243 (9%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + ++ +D +++ + + + + ++ A GGK++R
Sbjct: 1 MAIDFKQDILAPVAQDFAAMDQFINEGISSKVALVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A A ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAAYACG-ETNLKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ + S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQL------QAQHQPDTTEDI 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I KT L A E AI+A +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLQIIHGKTSRLFELATEGAAILAGK-PEYREPLRRFAGHFGNAFQIIDDILDYTSDADT 225
Query: 234 LPK 236
L K
Sbjct: 226 LGK 228
>gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183]
gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183]
Length = 353
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 64/245 (26%), Gaps = 20/245 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
K ID L + + + +D L GGK++R
Sbjct: 5 RVRKEIDHALLSFVDRQRPGVLAISDDLAPLLSALDALLAGGKRLRPAFCYWGWRAAGGE 64
Query: 69 HLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ A + + S PS + +
Sbjct: 65 DIEAATGIAAAAASLELLQASALIHDDVMDASDTRRGQPSAHRRFEAMHREHGWRGGAAA 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+ L + + + ++ ++ GQ LD+ +
Sbjct: 125 FGEGSAILLGDLCLAWSAEMFDTSGLDTEALRRGRPVFDLMRTEVICGQYLDMLESARGA 184
Query: 175 TQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
V + + GA +A + E LR +G LGI FQL DD+L
Sbjct: 185 GTVERALTVVEFKSAKYTIERPLHMGAELAGGTPEVVEALRAYGRPLGIAFQLRDDVLGV 244
Query: 231 EEDLP 235
D
Sbjct: 245 FGDPA 249
>gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
Length = 325
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 22/243 (9%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + ++ +D +++ + + + + ++ A GGK++R
Sbjct: 1 MAIDFKQDILAPVAQDFAAMDQFINEGISSKVALVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A A ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAAYACG-ETNLKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ + S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQL------QAQHQPDTTEAV 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I KT L A E AI+A +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLQIIHGKTSRLFELATEGAAILAGK-PEYREPLRRFAGHFGNAFQIIDDILDYTSDADT 225
Query: 234 LPK 236
L K
Sbjct: 226 LGK 228
>gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 320
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S L + +I+ L L +Q + + + + LL A GGK+IR V
Sbjct: 5 AMYSFLNGDLNKIEEQLK-LTVQASDPLVNEASLHLLEA------GGKRIRPVFVLLGGQ 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ RV A+E IH SL+HDD+ +D +RRGK T+ ++ + A+ G+ L
Sbjct: 58 FGTYHFEKMKRVAVALELIHMASLVHDDV--IDGAMLRRGKETIQAKWGDRFAMYVGDYL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A E + + I + ++ + Q D + + K
Sbjct: 116 FARALEQMCEIDDPVAHRILANTIVEVCRGEIEQI------SDKYRFDQNLRRYLQRIKR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KT L+ +C+ GA++A A + ++L FG +G+ FQ+ DD+LD K+
Sbjct: 170 KTALLIAASCQLGAVVAGAPETIHKKLYWFGYYVGMSFQITDDILDFIG-TEKQ 222
>gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone
biosynthesis) [Listeria monocytogenes LO28]
Length = 292
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 16/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 1 DIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARLAANADFN 54
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A++ + + + +D+ +RRG+ T+ ++ A+ G+ L + E +
Sbjct: 55 AVKNASVAIELI-HMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYM 113
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ K + S + + L+ Q D + K KT L+
Sbjct: 114 TEIKDVAAHKMLSHVTVELSTGEIEQL------KDKYNFDQSVRNYLRRIKRKTALLIAA 167
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+C G +++ S+ + ++L FG +G+ FQ+ DD+LD +L K
Sbjct: 168 SCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 215
>gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
Length = 288
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 128/225 (56%), Gaps = 5/225 (2%)
Query: 16 IDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ +++ + + +Q N L ++ Y+L GGK+IR L+ ++ ++ +
Sbjct: 1 MNNLIEQINTKLNQSIQNSSLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGV 60
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT AFE++S+
Sbjct: 61 QSALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +L+ L+ G GM+GGQ + +++ +D T + I K KTGAL+ F
Sbjct: 121 DELIED-KVKVKLVQRLSKASGHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTF 179
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A + +A Q + L F ++LG++FQ+ DDLLD D K
Sbjct: 180 AVMAAVDIAQVDQETSDHLEKFSQHLGLMFQIKDDLLDVYGDEEK 224
>gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
Length = 338
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+R++ ++ + N + S GGK++R L A++F
Sbjct: 28 MERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASAAMFGYEGEGH 80
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF ++
Sbjct: 81 IKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFRMMV 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ S + LQ ++ E + + KT AL A
Sbjct: 139 EVGSLEALDVLSTAASVIAEGEVLQL------SVAKNMETTEDDYQAVIRAKTAALFAAA 192
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
E G I+A + + L+ +G NLG+ FQL DD LD DL K
Sbjct: 193 AEVGPIVAGTDKAARNALKSYGMNLGLAFQLVDDALDYGGKVADLGK 239
>gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 332
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ++ K +D + L S M Y GGK++R L+ +
Sbjct: 21 IADDMKAVDDYIRAELASDVSRM--------HEISEYITSAGGKRMRPALLILISRALGY 72
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+GA IE +H +L+HDD+ +D +RRG+PT + ++ A++ G+ L T +
Sbjct: 73 KGDLCCYLGATIELLHTATLMHDDV--VDESNLRRGRPTANARWGNGAAVLVGDFLYTRS 130
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + L+ +Q + + D +DET+ F + + KT
Sbjct: 131 FQMMVRAGNLRVMQALADAANRLSEGEVVQMV------NAHDPSVDETRYFRVIERKTAC 184
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A +A S+ ++E + + LG FQ+ADD+LD D+ K
Sbjct: 185 LFEAGARMAAAIAECSKEQEEAVAQYALALGNAFQIADDILDYTGVAADIGK 236
>gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg]
gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg]
Length = 335
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 45/271 (16%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + KL + ++ ++ L + +T + A+ Y+LL GGK+IR ++ E
Sbjct: 4 DTNIEEKLHQKAETFAQMMTAYLPKEQGQQKT-----IFDALSYSLLAGGKRIRPIILLE 58
Query: 61 CASLFNVNH--------------------------LTALRVGAAIECIHCYSLIHDDLPS 94
+ A+E IH YSL+HDDLP+
Sbjct: 59 TYQALKEQEKGGALRASQLDIINENADFSWFKTLDDIVTKFSVALEMIHTYSLVHDDLPA 118
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-----------DNIR 143
MDN RRGK T H +Y E I+AG+ LL AFE+++ +K +
Sbjct: 119 MDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELVAEAFANIKDIENSTDAITLYDRV 178
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAH 201
S+ L+ G+ GM+GGQ++D++ + ++ I ++KTGAL+ + GAI++
Sbjct: 179 SRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELLFIYELKTGALLEASFLIGAILSG 238
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A+Q E R + +G+ FQ+ DD+LD
Sbjct: 239 ANQEELIRFTKIAKKVGLAFQIQDDILDVTS 269
>gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 334
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 17/235 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ + I+ L+ L D A+ Y L GGK++R L A +
Sbjct: 9 AKYGQEIEKALERYLA-------IDLADDFHEAVLYQLKTGGKRLRPLLTLATAEAVSGR 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT--- 125
AL A +E IH YSLI+DD+ +D G +RRG PTV + + AI+ G
Sbjct: 62 WEPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIE 119
Query: 126 ----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + + K L G + + + +
Sbjct: 120 EAVLETPKPLVFAREVAKVIKAIDEGERLDILFECAGRSDPYFAKARWKEVTLDDYVKMV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTG L+ A + G + + E FG N GI FQ+ DD+LD D K
Sbjct: 180 SLKTGVLIAAAAKWGVLSVSDDGDLAEAAWNFGLNAGIAFQIIDDVLDIYGDPKK 234
>gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87]
gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87]
Length = 288
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 8/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++T L + + + N L ++ Y+L GGK+IR L+ ++ N
Sbjct: 1 MSNLIEEVNTNLKQAIPE------SHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNE 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ L+ A+E IH YSLIHDDLP+MD+ RRGK T H Y E AI+AG+ LLT A
Sbjct: 55 DYHKGLQSALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKA 114
Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++S+ + ++ LS + +++ +D + I K KTG
Sbjct: 115 FELVSNDDLIEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTG 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ FA + +A Q L F E+LG++FQ+ DDLLD D K
Sbjct: 175 ALLTFAVMAAVDIAQVDQKTSHNLNEFSEHLGLMFQIKDDLLDVYGDEKK 224
>gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
43183]
gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
43183]
Length = 331
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 95/236 (40%), Gaps = 18/236 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ L + ++E ++ +L + + L A ++ + GGK+ R LV
Sbjct: 11 VDAALAADMRERLAVVEELLVQSVTS--------DDPLLAEASKHLVEAGGKRFRPALVL 62
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + +E H +L HDD+ MD +RRG+ + ++++ AI+
Sbjct: 63 LASHFGDPAAAGVVPAAVVVELTHLATLYHDDV--MDEATVRRGEESANVRWTNTVAILT 120
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L A ++++ Q + I + +
Sbjct: 121 GDYLFARASDLLADLGPQAVRIQARAFARLVRGQI-------AETSGPAPDADPLEHYLQ 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT +L+ + GA++A A Q E + E +G+ FQL+DD+LD +
Sbjct: 174 VVADKTASLIAVSGHLGALLAGAPQQVVETITSACEKIGVAFQLSDDILDIASEFE 229
>gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 394
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ L E + + + + + +H + +A + GGKK+R +V A
Sbjct: 69 ANLLSEILAPVTADMQQMNTNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHCT 128
Query: 66 ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ LT A ++ +D IRRGK T++ Y A++AG+
Sbjct: 129 AQREGLTELTEKHRRLAEITEMIHTASLVHDDVLDECDIRRGKQTINSMYGTRVAVLAGD 188
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +++ + SQ++ + Q + D I Q
Sbjct: 189 FLFAQSSWFLANLDNLEVIKLISQVIADFANGEISQA------ASLFDTDITLEQYLDKS 242
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C S A+ + + KE + +G++LG+ FQ+ DD+LD +
Sbjct: 243 FYKTASLIAASCRSAAVFSDSPVEVKEAMYAYGKHLGLAFQVVDDILDFTQTSE 296
>gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 358
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 74/255 (29%), Gaps = 26/255 (10%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAI-RYALLGGKKIRSFLVTECASL 64
+L + L + L H+ + D A+ + + GGK++R
Sbjct: 4 ELASVQAGVTKNLQEFLASHRPHVSAIGSHVDVASEALSDFVVSGGKRVRPLYAWAGYVG 63
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD--------EVTA 116
+ A + +D RRG PTVH + +
Sbjct: 64 GGGDESNTAVQRACSSLEFIQACALIHDDIIDASDTRRGNPTVHRRMETYLRDYPGFSGP 123
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
T +I +++ + + L+ + + ++ I +
Sbjct: 124 TERAAEFGTSVAILIGDLALVWAEDMFMESGVELSDLMRARPAWNAMRAEVIGGQILDIS 183
Query: 177 VFMI------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + G ++A + E +G NLGI FQL
Sbjct: 184 AEAVGETSEDTARRVNIYKTASYTITRPLQIGGLLAGVDDSTLEAFAGYGRNLGIAFQLR 243
Query: 225 DDLLDCEED---LPK 236
DDLL D K
Sbjct: 244 DDLLGVFGDPSVTGK 258
>gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 322
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + ++L E K ++ + + + LL IR + GK +R V
Sbjct: 8 NLEIKNELDEVIKIMEKRIKNSNRSIR--------NILLDMIRNS---GKMLRPAFVILS 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + AA+E +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+
Sbjct: 57 GKFGEYDRKRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + F ++S T S+++ + GQ + I
Sbjct: 115 FLFSECFLLLSDNITIENLKKVSKVVSRICKGEI------GQFESRYNIDITINDYLKRI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT AL + GA ++ + + L G N+G+ FQ+ DD+LD +
Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLDYTGEE 221
>gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
Length = 323
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 2 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 61 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 119 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMR------VIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 173 RLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGK 225
>gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12]
gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12]
Length = 294
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ KR + +L+ ++ + + ++ A+ Y+L GGK+IR LV L +V
Sbjct: 2 INTYIKRHEHVLEQIINE-----SSVPAQQIHLAMNYSLFPGGKRIRPILVYLTGHLIDV 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + AA+E HCYSLIHDDLP+MD+ +RRGKP+ H +DE TAI+ G+G+ A
Sbjct: 57 DPQVLDVIAAAVELTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGMQALA 116
Query: 128 FEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKM 183
E++ + + L + L G+ GM+ GQ ++ I E Q+ I +
Sbjct: 117 IEVLLTHLSPLVHPVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHL 176
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L+ E S+ K LR + ++G++FQ+ DD LD
Sbjct: 177 KTGRLISACIEMVLAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLDHYA 226
>gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
ATCC 10379]
gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
ATCC 10379]
Length = 315
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 15/233 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
L++ + +L+D+ + ++++L ++ Y L GGK++R L+ CA L N
Sbjct: 2 LKQYDTLVHEVLEDIF-----EITRSNDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNF 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +DN RRG T++ +Y A+ G+ L +
Sbjct: 57 ELNKKDIIRMASIVEIIHTASLIHDDIIDNADTRRGSVTMNKEYSNEFALRVGDYLFSVV 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ ++ + ++ + L +Q + D K KT
Sbjct: 117 LKEVAKFDNEKIHLYLAETLKELCIGELIQA------DGLYDIKTRRLDYLKKIKRKTAI 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FAC +G+I+A AS + +G LG+ +Q+ DD LD +L K+
Sbjct: 171 LIAFACVAGSIVADASDEDIRSAFSYGYYLGMSYQIIDDYLDFVGGTQNLGKE 223
>gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock4-2]
gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock4-2]
Length = 305
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
Length = 277
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ + + V AA+E +H YSLIHDDLP MDN +RRG T
Sbjct: 31 AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVEMLHTYSLIHDDLPCMDNADLRRGVAT 90
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H++YDEV+A++AG+ L T+AF ++SS + ++ L+ I +
Sbjct: 91 LHVKYDEVSAVLAGDALNTHAFYMLSSANLPAEAVVKCVQTLAENGGIYGMVIGQAIDCY 150
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+++ ++ ++ + KTGAL+ + + GAI++ S + E++ G LG+ FQ+ DD
Sbjct: 151 FENKHLNLDELKFLHLHKTGALIAASMKMGAIISAQSDKQCEKIYNIGLKLGLAFQIHDD 210
Query: 227 LLDCEEDLPK 236
++D D K
Sbjct: 211 IIDATSDEMK 220
>gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
Length = 325
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 89/239 (37%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + ++ +DT +++ + + + ++ A GGK++R
Sbjct: 1 MTIDFKQDILAPVAQDFATMDTFINEGITSKVALVMAVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A L R AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAAKACGAEDLERQRKLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L++ AF+++ S + LQ E
Sbjct: 113 VLVGDFLISRAFDLLVDLGDMTLLKDFSTGTCEIAEGEVLQL------QAQHQPETTEQT 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI++ + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLDIIHGKTSRLFELATEGAAILSG-TPQYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
KSM-K16]
gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
KSM-K16]
Length = 323
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ Q + + I+ L+ L ++ L GGK+IR LV
Sbjct: 4 ADIYKAFQGDIEFIEAELERTLSAKHPVLKEASTGLLK-------AGGKRIRPVLVLLAG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + +E IH SL+HDD+ +DN +RRG+ TV ++D A+ G+
Sbjct: 57 KFGDYQLDRLKHIAVTLELIHMGSLVHDDV--IDNAPLRRGRETVMSRWDNRVAMYTGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + + T+ + R ++S N +G + + + I++
Sbjct: 115 IFGH-----AIETTKAFSDKRVHTIISDVMNQICRGEIEQIRDQYNWDQGLRIYLRRIKR 169
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L+ +C+ GAI++ A+ ++ L F LG+ +Q+ DD+LD
Sbjct: 170 KTAL-LIAVSCQLGAIVSGATDELQKNLYYFAYFLGMSYQIMDDILDFVG 218
>gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
Length = 315
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 15/233 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNV 67
L++ + +L+D+L + +DRL I RY L GGK++R L+ CA L N
Sbjct: 2 LKQYDMLVHDVLEDILD-----ITKCDDDRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNF 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +DN RRG T++ +Y A+ G+ L
Sbjct: 57 ELNRKDIIRMASIVEIIHTASLIHDDIIDNADTRRGSITMNKEYTNEFALHVGDYLFAIV 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ + N ++ + L +Q + + K KT
Sbjct: 117 LNEVAKFSDERIHNYLAETLKELCIGELIQA------DGLYNIKTRRIDYLKKIKRKTAI 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FAC +G+I++ AS + +G LG+ +Q+ DD LD +L K+
Sbjct: 171 LIAFACVAGSIVSKASDENIKSAFSYGYYLGMSYQIIDDYLDFAGGAENLGKE 223
>gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 325
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
L++ I +++ + + ++ + Y + GGK++R LV +
Sbjct: 2 QSLKDIQNLIKQDIENNNQFIINSLSSEVV-LINQISHYIINSGGKRLRPLLVMLFSRAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N L A IE IH +L+HDD+ +D+ ++RRGK T + + +++ G+ L +
Sbjct: 61 NYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVGLDNMQIMQILADATNKISEGEVLQLLNARNIELSE------EDYTNVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ + + ++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
Length = 337
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTEC 61
++L ++R+ ++ D L + T+ + Y + GGK++R +
Sbjct: 10 KAQLSSITERMQALVADDLAAVERLLATRAASPVAVIPDLSGYIVSAGGKRLRPMITLIA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + AA+E IH +L+HDD+ +D +RRGKP + AI+ G+
Sbjct: 70 AHAVGKANAATHALAAAVEFIHTATLLHDDV--VDESDLRRGKPAAKAIWGNKAAILVGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L AF ++ + N + + Q + I
Sbjct: 128 FLFARAFNLLVEANSLDILNRLATASTVIAEGEVRQLAAMATRDLPT------EEYLAIV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KTGAL A E+GA+ A + + L +G+NLG+ FQ+ DD LD
Sbjct: 182 EAKTGALFEAAAETGAMSAGG-EEYSDALATYGKNLGLAFQIIDDALDYGG 231
>gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 294
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M G ++ + L L T RL +A+RYA+L GGK++R LV
Sbjct: 1 MTG-FDGWMRSTQADAERALVQYLPA-----ATALPLRLHAAMRYAVLDGGKRVRPLLVQ 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A LF+ R +A+E IH YSL+HDD+P MD+ +RRGKPTVH+ YDE TA++
Sbjct: 55 AAAELFDAAPANVARAASAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L AF +++ + + +L+ L + ++
Sbjct: 115 GDALQAQAFFVLAGMDIEPARAVAMLRLLADAAGSIGMCGGQAIDLASVGMDLSLAELEQ 174
Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KTGAL+ + GA L + +G+ FQ+ DD+LD D
Sbjct: 175 MHRLKTGALLRASVLLGAWCGTTPDAAATAALEAYAAAIGLAFQVIDDVLDATADSA 231
>gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas sp.
SM9913]
gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase)(OPP synthetase) [Pseudoalteromonas sp.
SM9913]
Length = 323
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
++ I++ ++D+ + M++ + Y + GGK++R L A
Sbjct: 2 DIKAIQALIESDMNDVNQLIHAQMRSDVA-LVNQLGLYIVNSGGKRVRPMLAILAAKALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + IE IH +L+HDD+ +D +RRG PT + ++ +++ G+ + T
Sbjct: 61 YQGKDHITLATIIEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+F+++ + + + LQ M + + KT
Sbjct: 119 SFQLMVGLGKMQIMQVLADATNIIAEGEVLQLMNCNDPDTTE------ASYMQVIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A AI+ + E L +G +LG FQL DD+LD D L K
Sbjct: 173 KLFEAATGLAAIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNADADQLGK 225
>gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
Length = 289
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 11/236 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECAS--LF 65
+N + ++TI+ +L ++ ++ +++Y+L GGK+IR L +
Sbjct: 2 KNLEELNTIIGELDSYLSNTFTYVDESLAKIYESMKYSLFSGGKRIRPLLCMITYNELAE 61
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N L A +E IH YSLIHDDLP+MD+ +RR KPT H Y E AI+AG+GLL
Sbjct: 62 NPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLLN 121
Query: 126 YAFEIISSPK----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
+ E+IS + + + + + G+ GM+GGQ+LDI +
Sbjct: 122 MSMEVISKYMESLDDIDELKKCIKALKFIYNCSGVLGMIGGQLLDIDYLNEQYNEELCED 181
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KT AL+ + +GAIMA +L+ FG+ +G+ +Q DDLLD +DL
Sbjct: 182 MYSLKTAALLKASIVTGAIMAGCEGEIITKLKEFGQYIGLAYQYKDDLLDMNKDLK 237
>gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
ATCC 33806]
gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
ATCC 33806]
Length = 343
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 85/238 (35%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + ++ L L ++ +Q + GGK+ R
Sbjct: 24 DETLNEHVLRGMENVEDRLRVELEKSPDFLQE-------KVMHLTKAGGKRFRPMFTLLA 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ + + AA+ + MD +RRG P+ ++++ AI++G+
Sbjct: 77 SN-YGPRPMCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGD 135
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A I+S + + G + + +
Sbjct: 136 ILLAHASRIMS--------ELGVDTVAHFAETFGALVTGQMRETEGPGTGDPIEHYMKVI 187
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG L+ A GA+ + A L+ G +G++FQ+ DD++D D K
Sbjct: 188 NEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGK 245
>gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
Length = 303
Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLKNHRLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +Y+E +A++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNASLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLVSA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLIMGLVASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQDEK 238
>gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
Length = 343
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 85/238 (35%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + ++ L L ++ +Q + GGK+ R
Sbjct: 24 DDTLNEHVLRGMENVEDRLRVELEKSPDFLQE-------KVMHLTKAGGKRFRPMFTLLA 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ + + AA+ + MD +RRG P+ ++++ AI++G+
Sbjct: 77 SN-YGPRPMCEDVFKAAVVVEMTHLATLYHDDVMDEAQMRRGVPSANMRWSNSVAILSGD 135
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A I+S + + G + + +
Sbjct: 136 ILLAHASRIMS--------ELGVDTVAHFAETFGALVTGQMRETEGPGTGDPIEHYMKVI 187
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG L+ A GA+ + A L+ G +G++FQ+ DD++D D K
Sbjct: 188 NEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGK 245
>gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 320
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S++ +++ L +L +Q + L + GK+IR L +
Sbjct: 2 DFTSQISGPLAKLEEELSLILTSQEPVVQEINKYLLETP-------GKRIRPALFFLSLA 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L+ L V A+E IH +L+HDD+ +D +RRGKP+++ + TA++ G+ L
Sbjct: 55 LWKEEPQEHLSVAVALELIHSATLVHDDV--VDASKVRRGKPSINEAWGNHTAVLTGDYL 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AFE+++ S L+ ++ Q +D
Sbjct: 113 FARAFELLTEYGNISLIKEMSALVRDMSEGEIQQQ------AQRFCTDLDIKNYLQRIAK 166
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT +SG I+A L +G N+G+ FQL DDLLD +
Sbjct: 167 KTARFFMVCAKSGGIVARPQDTEAICALENYGYNVGMAFQLIDDLLDVTGNE 218
>gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
HTCC2207]
gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
HTCC2207]
Length = 331
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 99/244 (40%), Gaps = 30/244 (12%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
++ + ++ ++ L ++ Y + GGK++R +V A
Sbjct: 3 SFHKAVESDFSAVNELIIANLQSNVGLVENIG--------HYIVGSGGKRLRPVVVLLSA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + A IE IH +L+HDD+ +D +RRG+ T + Q+ +++ G+
Sbjct: 55 LASGYQGKQHLTMAAVIEFIHTATLLHDDV--VDVSALRRGRETANNQWGNAPSVLVGDF 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + AF+++ + + ++ Q G + + +
Sbjct: 113 IYSRAFQMLVDVGDMPIMGVIADATNLISEGEVQQMGNAGNSAIDE------ATYYEVIY 166
Query: 183 MKTGALMCFACESGAIMAHASQNEK------------ERLRCFGENLGIIFQLADDLLDC 230
KT L A GA++A A + + + + +G++LG+ FQ+ADD++D
Sbjct: 167 RKTAKLFEAAARIGAMLA-AEEADLFVGDSAILDARTDAMAAYGKHLGLAFQIADDVMDY 225
Query: 231 EEDL 234
+ D
Sbjct: 226 QGDS 229
>gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) [Acinetobacter sp. ATCC 27244]
gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
19194]
gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) [Acinetobacter sp. ATCC 27244]
gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 347
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 23 MVIDFKQDILSPVATDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 75
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A + ++ + A ++ +D +RRG+PT + ++ TA
Sbjct: 76 MCLLAARACGLTNMQQAQH-LAAVIEMLHTATLVHDDVVDESNLRRGRPTANATWNNQTA 134
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 135 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEEI 188
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A ++ +E LR F + G FQ+ DD+LD D
Sbjct: 189 YLNIIHGKTSRLFELATEGAAILAG-TEEYREPLRRFAGHFGNAFQIIDDILDYTSDAE 246
>gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58]
gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58]
Length = 259
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 43 IRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+RYA L GGK++R LV + L H + AAIE IH YSL+HDD+P+MDN +R
Sbjct: 1 MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RGKPT HI+Y E TA++ G+ L T AF+++S T+L + ++ L G +GM G
Sbjct: 61 RGKPTCHIKYGEATALLTGDALQTQAFDVLS-RPTELPAARQLAMLSVLAKAGGSRGMAG 119
Query: 162 GQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLG 218
GQ +D + + + + + +KTGAL+ A GA S E L + LG
Sbjct: 120 GQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQ+ DD+LDCE D
Sbjct: 180 LAFQVIDDVLDCEADTA 196
>gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 305
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group]
gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group]
Length = 372
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 94/244 (38%), Gaps = 21/244 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECAS 63
+ + + L L S + ++ + +A + GGK++R LV A
Sbjct: 49 SVSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAE 108
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + LT A ++ +D+ +RRGK T+H Y A++AG+ +
Sbjct: 109 LAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFM 168
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + + SQ++ Q + D I +
Sbjct: 169 FAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSYY 222
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------E 232
KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 223 KTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGS 282
Query: 233 DLPK 236
DL K
Sbjct: 283 DLAK 286
>gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
Length = 323
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADSDMQDVNKLIYSQLESDVALINQLGFYIING-------GGKRMRPLLTI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M ++ ++
Sbjct: 112 GDFLYTRSFQMMTELGSMKVLEMLADATNVLAEGEVLQLMNCNDPDTSEENYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L A ++A + + L +G+ LG FQL DDLLD +L K
Sbjct: 166 VIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGK 225
>gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
Length = 334
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 17/235 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ + ++ L+ L A+ Y + GGK++R L A +
Sbjct: 9 AKYGEAVEQALERYL-------SIDLAPDFRDAVMYQVKTGGKRLRPLLTLATAEAISGQ 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL A +E IH YSLI+DD+ +D G +RRG PTV Y + AI+ G
Sbjct: 62 WKPALPAAAIVELIHNYSLIYDDI--IDRGDLRRGMPTVRKAYGDNAAILIGIWYREAIE 119
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-------LGGQMLDIQDEFIDETQVFMIQ 181
E + ++ + + + + +
Sbjct: 120 EAVLDTPKPTLFAREVAKVIKAIDEGERLDILFEYAGREDPYFVKARWREVTLDDYIKMV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTG L+ A + GA+ + FG N G+ FQ+ DD+LD D K
Sbjct: 180 SLKTGVLIGAAAKWGALSVSDDAEIADAAWNFGLNAGVAFQVIDDVLDIYGDPKK 234
>gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
nagariensis]
gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
nagariensis]
Length = 389
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 10/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ L E + + ++ + + + +H + +A + GGKK+R +V A
Sbjct: 64 ANLLNEILAPVKSDMEQMNQNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHST 123
Query: 66 ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ LT A ++ +D IRRGK T++ Y A++AG+
Sbjct: 124 AQREGLTELTDKHRRLAEITEMIHTASLVHDDVLDECDIRRGKKTINSMYGTRVAVLAGD 183
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +++ + SQ++ + Q + D I Q
Sbjct: 184 FLFAQSSWFLANLDNLEVIKLISQVIADFANGEISQA------ASLFDTDITLEQYLDKS 237
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C S A+ + + KE + +G++LG+ FQ+ DD+LD +
Sbjct: 238 FYKTASLIAASCRSAAVFSDSPVEVKEAMYSYGKHLGLAFQVVDDVLDFTQSTE 291
>gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
Length = 325
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 22/243 (9%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +DT +++ + + + ++ A GGK++R
Sbjct: 1 MTIDFKQDILAPVANDFAAMDTFINEGITSKVALVMAVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A +L R AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAAKACGAENLEPHRKLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L++ AF+++ + S + LQ E
Sbjct: 113 VLVGDFLISRAFDLLVDLNNMVLLKDFSTGTCEIAEGEVLQL------QSQHQPETTEAT 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I KT L A E AI++ ++ L+ F + G FQ+ DD+LD D
Sbjct: 167 YLNIIHGKTSRLFELATEGAAILSDKD-EFRQPLKTFAGHFGNAFQIIDDILDYTSDADT 225
Query: 234 LPK 236
L K
Sbjct: 226 LGK 228
>gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399]
gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399]
Length = 321
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 84/222 (37%), Gaps = 13/222 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
++E+ ++ L+ L ++ + + S GGK++R L A +
Sbjct: 5 IEEDLTVLEAALEAALSSDSALVSDIGAHLVSS-------GGKRLRPALFLLAARA-GAD 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+ ++ +D RRG T + ++ AI++G+ + AF
Sbjct: 57 FDRDRAMPIAVALELIHTASLVHDDVIDEADTRRGSATTNAKWGNQVAILSGDYIFARAF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + L+ +G + Q ++ I + KT
Sbjct: 117 KQVARVG----YSSHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI-RKKTADF 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ CE GA + S + +G +G+ FQ+ DDLLD
Sbjct: 172 LEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDL 213
>gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
Length = 322
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ S ++++ +D ++ L + + + S GGK++R + A
Sbjct: 5 SIYSLIEDDMTAVDNLIQQRLQSDVALINQLGFYIINS-------GGKRLRPAIAILSAK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + IE IH +L+HDD+ +DN +RRGK T + + +++ G+ L
Sbjct: 58 ACGYEGDKHINLATIIEFIHTATLLHDDV--VDNSAMRRGKETANNLWGNEASVLVGDFL 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T +FE++ + I S + LQ + D E + +
Sbjct: 116 YTRSFEMMVEMDSMRLMRILSSTTNIIAEGEVLQLLNC------HDADTTEARYLEVIHH 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA+++ ++ + ++ + + +LG FQL DDLLD +
Sbjct: 170 KTAKLFEAAGQLGAVISRSADDIEQAMARYAMHLGSAFQLVDDLLDYSQSSE 221
>gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
Length = 288
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 9/228 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L ++ + +ID L + L + N + Y++ GGK++R L
Sbjct: 3 LKDFQEKYTPQIDNFLKEHL------VTEIDNLTFSKIMSYSVMAGGKRLRPLLFLATLE 56
Query: 64 LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N LR+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+G
Sbjct: 57 TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL + I+ I + +G Q + + + + + ++
Sbjct: 117 LLPLGIQWITEGSNSAALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKM-IDQMEW 175
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+KTG L+ + + AI A A+ +E RL F + G +Q+ DDL+D
Sbjct: 176 LKTGCLIEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDV 223
>gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH676]
gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-15]
gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-Cer4]
gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST24]
gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1550]
gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
m1550]
gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST24]
gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-Cer4]
gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock1-15]
gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
AH676]
gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 305
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 322
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 11/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
L K ID L M++ L Y + GK++R V A +
Sbjct: 2 SLDTIKKPIDQELIKFEQHFKQSMRSSVP-LLDKITYYIVRRKGKQVRPMFVFLAAQVCG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ IE +H +L+HDD+ +D+ RRG +V+ + A++ G+ LL+
Sbjct: 61 GVVEATYVAASLIELLHTATLVHDDV--VDDSMERRGFFSVNALWKNKIAVLVGDFLLSQ 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ K I S + +++ LQ ++ ++ + + I + KT
Sbjct: 119 GLLLAVRNKQFRILEIVSDAVKAMSEGELLQIEKARRLDIKEEVYYE------IIRQKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
+L+ AC++GA A ++ ER+R FGE +G+ FQ+ DDL D +D+ K
Sbjct: 173 SLISSACQAGAASATTDEDAIERMRLFGEKIGLAFQIKDDLFDFGTDDVGK 223
>gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
Length = 304
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 8/185 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK++R L A A IE IH +L+HDD+ +D +RRGK T +
Sbjct: 24 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 81
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++ G+ + T +F++++ + + S + + Q M +
Sbjct: 82 AAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE 141
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++
Sbjct: 142 ------ASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 195
Query: 229 DCEED 233
D D
Sbjct: 196 DYTSD 200
>gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 306
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 8/185 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK++R L A A IE IH +L+HDD+ +D +RRGK T +
Sbjct: 26 GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 83
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++ G+ + T +F++++ + + S + + LQ M +
Sbjct: 84 AAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNIIAEGEVLQLMNCNDPDTTE 143
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ KT L A + GAI+ A + L+ +G+ LG FQL DD++
Sbjct: 144 ------ESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 197
Query: 229 DCEED 233
D D
Sbjct: 198 DYTSD 202
>gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis 02_1987]
gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length = 359
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVN 68
+L+ T M + + + + Y L G GK IR LV A +
Sbjct: 31 HELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGAD 90
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+A+ ++E +H +SL+HDDL MD RR +PTV + + A++AG+ +L+ A
Sbjct: 91 PHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAH 148
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + L L + + + + KT AL
Sbjct: 149 EVLLDCDSPHVG---AALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAAL 205
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M + E GA++A A ++ +E L +G ++G+ FQL DDLL
Sbjct: 206 MAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249
>gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus]
Length = 361
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 80/236 (33%), Gaps = 7/236 (2%)
Query: 6 PSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ LQ ++T L +L + + + L A Y L K++R LV L
Sbjct: 19 QAWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCL 78
Query: 65 FNVN---HLTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAII 118
+ R A +E +H + LIHDD+ G + + E A++
Sbjct: 79 ARGSAVVPSGLWRFAAGLELLHTFLLIHDDVADQAELRRGAPPLHRMLAPGRAGEDLAVV 138
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A E++ + + H Q + E +
Sbjct: 139 VGDHLFARALEVMLGSGLTCVAGVVQYYLGVSGHTAAGQYLDLDLGRAPLAEVTLFQTLR 198
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ C A++ AS E L G ++G+ +QL DDLL D
Sbjct: 199 VAHLKTARYGFCAPLVCAAMLGGASSGLVEELERVGRHVGLAYQLRDDLLGLFGDS 254
>gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
synthetase/ farnesyltranstransferase [Mycobacterium
bovis AF2122/97]
gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
synthetase/ farnesyltranstransferase [Mycobacterium
tuberculosis H37Rv]
gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
IdsA1 [Mycobacterium tuberculosis H37Ra]
gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
F11]
gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis H37Ra]
gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis 94_M4241A]
gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T92]
gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T85]
gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis GM 1503]
gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis T17]
gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 1435]
gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis C]
gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
str. Haarlem]
gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 605]
gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T17]
gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T92]
gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis GM
1503]
gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis 210]
gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 4207]
gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN R506]
gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
ferase [Mycobacterium tuberculosis 94_M4241A]
gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu001]
gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu002]
gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu003]
gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu004]
gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu005]
gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu006]
gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu008]
gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu007]
gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu009]
gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu010]
gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu011]
gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu012]
gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN V2475]
gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
Short=GGPP synthase; Short=GGPPSase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
Short=GGPP synthase; Short=GGPPSase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
(PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
(FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
SYNTHASE) [Mycobacterium bovis AF2122/97]
gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
(PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
(FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
SYNTHASE) [Mycobacterium tuberculosis H37Rv]
gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase
idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis C]
gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
str. Haarlem]
gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
IdsA1 [Mycobacterium tuberculosis H37Ra]
gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis
F11]
gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 1435]
gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T46]
gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis CPHL_A]
gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 605]
gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis K85]
gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T17]
gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis T92]
gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase +
farnesyltranstransferase [Mycobacterium tuberculosis GM
1503]
gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
ferase [Mycobacterium tuberculosis 94_M4241A]
gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu001]
gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu002]
gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu003]
gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu004]
gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu005]
gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu006]
gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu007]
gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu008]
gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu009]
gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu010]
gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu011]
gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis SUMu012]
gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id
[Mycobacterium tuberculosis CDC1551A]
gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis W-148]
gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
[Mycobacterium tuberculosis KZN 4207]
Length = 359
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVN 68
+L+ T M + + + + Y L G GK IR LV A +
Sbjct: 31 HELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGAD 90
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+A+ ++E +H +SL+HDDL MD RR +PTV + + A++AG+ +L+ A
Sbjct: 91 PHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAH 148
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + L L + + + + KT AL
Sbjct: 149 EVLLDCDSPHVG---AALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAAL 205
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M + E GA++A A ++ +E L +G ++G+ FQL DDLL
Sbjct: 206 MAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249
>gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
Length = 322
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ +D I+ ++ ++ D ++SA GGK++R LV
Sbjct: 10 VADDFTAVDAIIRQQVVSRVPLVEKIG-DYIISA------GGKRLRPLLVLLSGRALGYQ 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ M + +RRG+ T + Q+ +++ G+ L + +F
Sbjct: 63 ADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTANAQWGNAPSVLVGDFLYSRSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I S + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMKILSHATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + A +A A++ ++E LR FG++LGI FQL DDLLD + D L K
Sbjct: 175 FEASTHAAAALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGK 225
>gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A]
Length = 303
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 KRFESFLNHHHLHLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSTNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 351
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L L++ R++ +L + +++ L A GGK+ R LV
Sbjct: 28 DEALSVALKDGLLRVEEVLLEYTRSDHAYISEIT-SHLAQA------GGKRTRPLLVLLA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + IE H +L HDD+ MD +RRG + + ++D AI++G+
Sbjct: 81 AQFGDAARAGVVEAAVVIELTHLATLYHDDV--MDEAALRRGVASANQRWDNSLAILSGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S ++ I + + ++ +
Sbjct: 139 FLFARASTLLSELGPDAVRIQAETFERLVSGQI-------SESVGPKNGQNPVDHHLEVL 191
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ A GA+ A + ++ L FGE G+ FQL+DDLLD +
Sbjct: 192 AGKTGSLIATAARFGAMFAGCTAEQERILADFGELFGVAFQLSDDLLDIASESE 245
>gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
glomerata]
gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
glomerata]
Length = 333
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ ++ +L D + + T+ + L+ A GGK+ R +V
Sbjct: 14 DPDLEQAVRRGLYGVERMLRDAVRSDVPFV-TETSRHLVDA------GGKRFRPMVVLLA 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + L AIE H +L HDD+ MD +RRG + ++++ AI+ G+
Sbjct: 67 AHFGDPEAIGVLPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASANVRWTNTIAILTGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +I + + + L + + +
Sbjct: 125 FLFARASDITADLGPE-------ATRILARTIATLCEGQIRETVGSLPGQDPVEHYLRVI 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT +L+ + GA++A A + L FG+ G+ FQL+DDL+D D
Sbjct: 178 REKTASLIATSGRLGAMLAGADLITVDALAAFGDYFGVAFQLSDDLIDVASDQA 231
>gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 322
Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + ++L E K ++ + + + + + Y GK +R V
Sbjct: 8 NLEIKNELTEVIKIMEKRIKNSNKSIRNILLD---------MIYNS--GKMLRPAFVILA 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + AAIE +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+
Sbjct: 57 GKFGEYDRKKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKDYAVFIGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +F ++S S+++ + GQ ++ I
Sbjct: 115 FLFSESFLLLSDNIAISNLKKVSKVVSKICKGEI------GQFESRRNIDITINDYLRRI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL + GA + +N + L G N+G+ FQ+ DD+LD
Sbjct: 169 AAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILDYTG 219
>gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5]
Length = 373
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 5/224 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L K + L+ + T + L +RYAL GK IR LV A++ +
Sbjct: 48 LDTIRKPVTAELEAF-DEFVDRQFTAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSP 106
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + L D + + A
Sbjct: 107 VAEAAKGRRVHLAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYIL 166
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S T + ++ + + S+ + + + + I KT
Sbjct: 167 ARNLSIGLTSGQFDLVTHVCGSMAALCEGEVLQS---ECAEKHTMTRQAYLDIIYKKTAC 223
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ + +GA+ ASQ + +R FGE +G+ FQ+ DD+LD
Sbjct: 224 LIGVSASAGAMAVGASQQKVALMRRFGEAVGMAFQIQDDILDYT 267
>gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 325
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
L++ I +++ + + ++ + Y + GGK++R LV +
Sbjct: 2 QSLKDIQNLIKQDIENNNQFIINSLSSEVV-LINQISHYIINSGGKRLRPLLVMLFSRAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N L A IE IH +L+HDD+ +D+ ++RRGK T + + +++ G+ L +
Sbjct: 61 NYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVGLDNMKIMQILADATNKISEGEVLQLLNARNIELSE------EDYTNVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ + + ++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34]
gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34]
Length = 325
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + + + +D ++ L ++ Q + ++ A GGK++R ++ A
Sbjct: 8 ALLAPVAADMRAVDAVIRRRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLSAR 60
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L
Sbjct: 61 AFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ AF+++ + I S + LQ + D + + + +
Sbjct: 119 YSRAFQMMVEAGSMRIMEILSNATNVIAEGEVLQLLNM------HDPEVTVERYLQVIRY 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + + GA++A A +E +G +G FQL DD+LD
Sbjct: 173 KTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTASAE 224
>gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
dimethylallyltransferase + geranyltranstransferase +
[Mycobacterium tuberculosis EAS054]
gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
tuberculosis EAS054]
gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
tuberculosis EAS054]
Length = 359
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVN 68
+L+ T M + + + + Y L G GK IR LV A +
Sbjct: 31 HELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGAD 90
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+A+ ++E +H +SL+HDDL MD RR +PTV + + A++AG+ +L+ A
Sbjct: 91 PHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAH 148
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + + L L + + + + KT AL
Sbjct: 149 EVLLDCDSPHVG---AALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAAL 205
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M + E GA++A A ++ +E L +G ++G+ FQL DDLL
Sbjct: 206 MAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249
>gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
Length = 465
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 17/242 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLL-------QTASHMQTQHNDRLLSAIRYAL-LGGKKI 53
+ L ++ + ++ + D L A ++ + + L+S +Y L GK+I
Sbjct: 135 SNELFKIVESDLSQVTRNILDTLSVGAGASSDYAPYLSKKTSPVLVSMSKYYFELKGKRI 194
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R +V + + N A + + ++ +D RR +++ Y
Sbjct: 195 RPTIVLLLSKALSANVQKTQIKLAEVVEMI-HTASLVHDDVIDEASTRRDVLSINQSYSN 253
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+ G+ LL A I+S+ + S + L +Q G
Sbjct: 254 KLAILCGDFLLARASLILSTIRNSDVTECMSLALAELVEGEFMQAKSSGVSSFDHYLKKT 313
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + +C S AI++ A QN FG+NLG+ FQ+ DDLLD
Sbjct: 314 YLKTGSLITN--------SCRSAAILSGADQNIVNISTEFGKNLGLAFQIIDDLLDYTGS 365
Query: 234 LP 235
Sbjct: 366 AE 367
>gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 318
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 8/222 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ + + + + +++ + +++ GGK++R V + + VN
Sbjct: 6 INREIKKIEKELKNTIKSSNPILEEASLHLLSSGGKRVRPSFVVLSSE-YGVNPRNEDTY 64
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+ + +D RRG+ T+ ++D+ TAI+ GN LL A ISS +
Sbjct: 65 KIAVSLELIHMATLVHDDVIDRSDKRRGRLTISKKWDQETAILTGNYLLALALNNISSIQ 124
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ I S ++ + Q ++ KT L+ A E
Sbjct: 125 DKRIHIILSNAIVDVCRGELFQFQDQFNSNQTITNYLRR------INRKTALLIQLATEL 178
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
GA+ A+A +L+ G +G+ FQ+ DD+LD K+
Sbjct: 179 GALSANADLKTANKLKRIGHYIGMSFQIVDDVLDFTS-TEKQ 219
>gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
Length = 356
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ +R++ + + + N + S GGK++R + A +F+ +
Sbjct: 43 KDDMERVNKFILSMAKSDIEMIPEISNHLISS-------GGKRLRPMITLASAHMFDYQN 95
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +I+ G+ LL AF+
Sbjct: 96 DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASILVGDFLLGQAFK 153
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q +++ + I KT AL
Sbjct: 154 LMVDVGSIEALSVLANAAAIIAEGEVMQL------SAVKNIETSTSDYLKIINAKTAALF 207
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A E G I+A E+ LR +G LG+ FQL DD+LD
Sbjct: 208 SAAAEVGPIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGG 250
>gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 312
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLT 71
+R++ + + + N + S GGK++R L CA L +
Sbjct: 1 MERVNATILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLACADLCGYGDGDG 53
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+++ AA+E +H +L+HDD+ +D +RRG+ I++ +++ G+ LL AF ++
Sbjct: 54 AVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNEASVLVGDFLLGQAFRMM 111
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ +I S + +Q ++ E + + + KT L
Sbjct: 112 VEVGSLRALDILSAAATVIAEGEVMQL------TAAKNTETSEDEYLAVIRGKTAELFAA 165
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
ACE G ++A + E+ R +G NLGI FQL DD+LD
Sbjct: 166 ACEVGPVLAGRPEAEQVACRAYGMNLGIAFQLIDDVLDYGGTSA 209
>gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
Length = 362
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 22/252 (8%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLV---- 58
+ L + + + L+D L + ++ + R+ L GGK+IR
Sbjct: 9 ETTLADIAAAVQPQLEDFLDERRDLVEPVGPVFAETTAGLERFVLRGGKRIRPAFAWTGW 68
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG---------------YIRRG 103
+ + A + + D + + +RG
Sbjct: 69 LAGGGATDGDVARAALRACSALEFVQACALIHDDIIDASQTRRGYPTTHREFAELHAQRG 128
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
++ E TAI+ G+ L +A ++ + +R+ + L G L
Sbjct: 129 WSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERYLRAARAWAAMRTEVLGGQLLDI 188
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ + + +++ G + GA +A AS LR G +LG+ FQL
Sbjct: 189 VSEASRDESQAAAERVVRFKTAGYTVERPLHVGAALAGASDQAITALRAIGVDLGVAFQL 248
Query: 224 ADDLLDCEEDLP 235
DDLL D
Sbjct: 249 RDDLLGAFGDPA 260
>gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
Length = 344
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 28/251 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ + + ++++ ++ + + L A RY + GGK++R ++
Sbjct: 5 EDVEAAIVARREQVNDAIER-------ELPVDEPEELYEASRYLMDAGGKRLRPTMLLLA 57
Query: 62 ASL----------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
A + + +R IE I ++LI MD+ +RRG P
Sbjct: 58 AESLADVAPQSTDYRSFPTVEGDEIDVMRAAVGIETIQSFTLI--HDDIMDDDDLRRGVP 115
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
VH +YD TAI+AG+ L + AFE + + + ++ + L+ T +G
Sbjct: 116 AVHREYDLSTAILAGDTLFSKAFEYMLDTGAKAERSVAATKRLAQTCTEICEGQSFDIDF 175
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + + + ++KT L + A + A ++ E L +G ++G FQ+ D
Sbjct: 176 ES-RAEVTTDEYLDMVELKTAVLYAASASIPAQLMGA-EDAVEPLYGYGLDVGRAFQIQD 233
Query: 226 DLLDCEEDLPK 236
DLLD K
Sbjct: 234 DLLDLTTPSEK 244
>gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C]
Length = 337
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E+ + ++ ++ + + + N + S GGK+IR + A +F
Sbjct: 24 KEDMECVNQLIISMAQSNVAIIPEISNYLISS-------GGKRIRPMITLATAHMFGYQG 76
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T I + +I+ G+ LL AF+
Sbjct: 77 DKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARIIWGNQASILVGDFLLGQAFK 134
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + +Q ++ + + I KT AL
Sbjct: 135 MMVDVGSLDALSVLSNAAAIIAEGEIMQL------SAAKNIETNVSDYLKIINAKTAALF 188
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E G I+A E+ L +G +LG+ FQL DD+LD L K
Sbjct: 189 SAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGK 238
>gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 16/234 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L L ++ +L + + + T+ + L+ A GGK+ R+ LV
Sbjct: 12 VDERLAQDLASGLAEVEKLLRSSVESEDAFV-TEASKHLIEA------GGKRFRAMLVLL 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + IE H +L HDD+ MD +RRG P+ + ++D AI+ G
Sbjct: 65 AAQFGSPEAPGVVPGAVVIELTHLATLYHDDV--MDEAPVRRGSPSANARWDNTVAILTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A EI++ + + I + + + +
Sbjct: 123 DYLFAQASEILADLGADVIRIQAQTFSRLVRGQIR-------ETIGPRPGEDHVAHYIDV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KTG+L+ + GA+++ AS +RL E +G+ +QL DDLLD D
Sbjct: 176 LADKTGSLIATSGRFGALLSGASPEIVDRLTRACEAIGVGWQLGDDLLDVASDS 229
>gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str.
Houston-1]
gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str.
Houston-1]
Length = 356
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 15/223 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ + ++ + + + N + S GGK++R L A +F +
Sbjct: 43 KDDMEHVNQCIFSMAKSDVEIIPEISNHLISS-------GGKRLRPMLTLASARMFGYQN 95
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +I+ G+ LL AF+
Sbjct: 96 DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASILVGDFLLGQAFK 153
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ + + +Q ++ + I KT AL
Sbjct: 154 MMVDVGSIEALSVLANAAAIIAEGEVMQL------SATKNIETSISDYLKIINAKTAALF 207
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A E G I+A E+ LR +G LG+ FQL DD LD
Sbjct: 208 SAAAEVGPIIAGYGHEERLALREYGTFLGLAFQLIDDALDYGG 250
>gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
ethenogenes 195]
gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
ethenogenes 195]
Length = 324
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 13/234 (5%)
Query: 8 KLQENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
KL I+ L + + S + Q + + Y L+GGK +R L A F
Sbjct: 3 KLSSIYAPINEGLKGVEDEFKLVSESRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCF 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + + E +H +L+ ++D RR + TV+ + AI+ G+ L
Sbjct: 63 GTGIKKVLPLATSSEMLHIATLV--HDDAIDKADTRRSRRTVNSVWGLEKAILLGDFLFA 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+A E+ + + +Q + Q + KT
Sbjct: 121 HAAEVAAETDNMRIVTLFAQ------TLQIIASGELKQAYASFNPDQSYENYLERISGKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AL A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD D+ K
Sbjct: 175 AALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228
>gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2]
Length = 296
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
Q+ ++ DT L+ L+ RL A+R+ALL GGK++R LV + +V
Sbjct: 8 QQVKQQTDTSLNTLIDDL-----PHDAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVP 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AIEC+H YSL+HDDLP+MD+ +RRG+PT HI +DE TAI+AG+ L AF
Sbjct: 63 KGDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGQPTCHIAFDEATAILAGDALQALAF 122
Query: 129 EIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
++ + N R +L+ L G +GM GGQ +D+ + Q+ + +KT
Sbjct: 123 STLADAPLSDFATNKRGELLSVLARAAGYRGMCGGQAIDLTSTGEEISLEQLKRLHNLKT 182
Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL+ E +I++ N K L + +++G+ FQ+ DD+LD E +
Sbjct: 183 GALLRACVEMVSIVSQDLDSNSKADLLAYADDIGLAFQVQDDILDVEGNSE 233
>gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
Length = 329
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ +L D LL Q + Y + GG K+IR L+ A
Sbjct: 11 EVMDLLRDDLLAIEREFTVQSASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQ 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +R+GA +E +H +L+HDD+ +D RRG+P+ + + ++AG+ L +F
Sbjct: 71 SRIRLGAVVEMLHTATLVHDDI--IDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFRT 128
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ ++ L + LQ G +++ + F + KT L
Sbjct: 129 ALEERNFHVLDLLITLTQQMVEGELLQMEKLGHLINE-------EEYFDLIFRKTAFLFK 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + GA + AS +E+L +G NLG+ FQ+ DD+LD
Sbjct: 182 VSMQLGAAIEGASDQTEEKLGEYGRNLGLAFQIVDDVLDLTA 223
>gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
Length = 336
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N L ++ + + L L Q S + + + AL GGK+ R
Sbjct: 16 NAELNDRITAGLQEAEDFLRWRLSQGESFITDKIS-------HLALAGGKRFRVVFALLA 68
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A +R A + + + ++ MD RRG + + ++ AI+AG+
Sbjct: 69 AQYGKNPTARKVRDAAVVVELTHLATLY-HDDVMDEADRRRGAESANARWGNSMAILAGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A EI+S + L + + D + ++ +
Sbjct: 128 YLFAVASEILSGLGAHTV-RHFADTFGELVTGQMRETVGAADGEDAIEHYMK------VI 180
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTG L+ A GA+ + A Q + L FG ++G IFQ+ DD++D D
Sbjct: 181 QEKTGVLIASAGYLGALHSGAEQEHVDALAQFGRHMGQIFQIVDDIIDIWADPE 234
>gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 339
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
LL + D+L + +RYALL GK +R + A + L E
Sbjct: 23 RLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTE 82
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H +L+HDD+ +D +RRG+P V + Y AI+AG+ L+ +AF+ + +
Sbjct: 83 YLHVATLVHDDI--IDADTLRRGRPAVPVAYGIPGAIVAGDHLIFHAFQAMVESGRAVPA 140
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIM 199
+ +L + + + + + ++KTG+L C GA++
Sbjct: 141 ASVVAAVTALAEAGQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGALL 200
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A L +GE++G FQ+ DDLL
Sbjct: 201 GGADPLVASGLARYGEHVGTAFQIRDDLLSYLS 233
>gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299]
gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299]
Length = 452
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 99/231 (42%), Gaps = 10/231 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASL 64
+ + + + ++ + + ++ L +A + GGK++R LV A L
Sbjct: 131 IDDIIAPVKSDMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQL 190
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ +T + A ++ +D+ RRG T+H Y AI+AG+ L
Sbjct: 191 MSMDDITERQRRLAEITEMIHTASLVHDDVLDDCDTRRGAETIHTLYGTRVAILAGDFLF 250
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +++ + SQ++ Q + +++++ K
Sbjct: 251 AQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEGYLEKSHN------K 304
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T +L+ +C+S A+ + S++ K + +G++LG+ FQ+ DD+LD +
Sbjct: 305 TASLIAASCKSAAVFSEVSEDVKMDMYEYGKHLGLAFQIVDDILDFTQSEA 355
>gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
acidophilum DSM 1728]
gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
acidophilum]
Length = 354
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 83/242 (34%), Gaps = 14/242 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
+ RID + + + + + R++ IR Y GGK++R + LF
Sbjct: 10 ETINNYKLRIDERISRFFDRKEAETKDDLSRRVIRMIREYTEGGGKRLRPIFLVLGYRLF 69
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT---VHIQYDEVTAIIAGNG 122
+ +IE Y LIHDD+ + + + E
Sbjct: 70 ADENNAIFDASISIELAQSYLLIHDDVIDDSDLRRGKPSMHIRLWRSFFPESEKGKKMGE 129
Query: 123 LLTYAFEIISSPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L ++ + L+ + ++ GQ LD+ +++ +
Sbjct: 130 GLAIVAGDLAETYAHESLINSDFDPSLLLLADMELTKTIEMTGYGQFLDVVSGTLNDFRE 189
Query: 178 FMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ ++ + GA+++ ++ LR FG LGI FQL DD+L D
Sbjct: 190 NDLIRLHLWKTARYTLEGPLAMGALLSGR-HDQIMDLRLFGRTLGIAFQLKDDILGLFGD 248
Query: 234 LP 235
Sbjct: 249 EA 250
>gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittII]
gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittII]
Length = 323
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 2 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 61 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 119 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 173 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGK 225
>gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
Length = 327
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 7 IQQDLKDEVTKLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I + I K K
Sbjct: 118 SQSFKLMVA-----SGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 173 TAELFGTACAVGAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 220
>gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
Length = 336
Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L K I + L+D + + + + L A+ + GK++R L+ A F
Sbjct: 14 YLSLIKKPIYSELEDF-TKLFNQSLSHDSGLLSQALEHIRKRAGKRMRPMLILLIAKNFG 72
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+
Sbjct: 73 DITPVSQNAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYNNKVAVLVGDYILST 130
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S ++ +QL +L+ LQ + + + + K KT
Sbjct: 131 ALLYVSYTHSETIVRYLAQLGRTLSDGEILQLSNIQNREISEKVYYE------VIKQKTA 184
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA+ AHAS+++ E + FG+NLGIIFQ+ DD+ D
Sbjct: 185 ALFEACAGIGALSAHASESDVEAAKKFGQNLGIIFQIRDDIFDYY 229
>gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 326
Score = 95.3 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 10/221 (4%)
Query: 15 RIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+I LD++ L + + +Y L GGK+IR L A +F+
Sbjct: 6 KIQQDLDEVTKLNDLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDN 65
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ +A+E IH +L+HDD+ +D+ +RR KPT +I + T+I+ G+ L + +F+++
Sbjct: 66 HIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLM 123
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+I++ +L+ I +G + + + I + I K KT L
Sbjct: 124 -----IASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGA 178
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+CE GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 179 SCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 219
>gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 324
Score = 95.3 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 16/223 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
K+++ L +L S + + GGK++R +V C S +
Sbjct: 17 LKQVEARLRELSRGEDSWTPLFSDSVI--------RGGKRLRPAMVLLCGSFYASPQTEL 68
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + AIE IH SL+HDD+ +D+ RRG PTV ++ + A++ G+ L AF +++
Sbjct: 69 VDMATAIELIHTASLVHDDV--IDHAASRRGHPTVSAKWGDHQAVLYGDFLFARAFSLLT 126
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ + + Q + + E KT +
Sbjct: 127 KHGQVGVLENMTRAISLMCEGEIEQA------ASRFNPNVTEADYISYIHKKTAYFISAC 180
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
C +GA EK+ L FG LG FQ+ DDLLD +
Sbjct: 181 CLAGAEACDMPPAEKKALATFGLQLGYAFQMIDDLLDYTANPG 223
>gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
Length = 326
Score = 95.3 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 13/232 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I+T L D + +H + L + + + GK++R L+ A F
Sbjct: 4 LSLIKQPIETELGDFI-DLFNHALDHEDGLLRTVLNHIKQRAGKRMRPILILLMAKNFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A
Sbjct: 63 VSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVNADYDNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S +++ ++L +L+ LQ +IQ++ I E + I + KT A
Sbjct: 121 LLHVSYTHSEIIVRYLAELGRTLSDGEILQL------WNIQNKEITEEVYYKIIERKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L GA A+AS E E R FG++LGI+FQ+ DD+ D E ++ K
Sbjct: 175 LFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGK 226
>gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
Length = 345
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 9/237 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + L + ++T ++ + S + A GGK++R L
Sbjct: 11 SSDPEASLNDLVALVETGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLAT 70
Query: 62 ASLFNVNHLTALRVGAAIECI---HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L R G ++ +D +RRG+ I++ +++
Sbjct: 71 AQLCGYRSAEGGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVL 130
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL AF+++ + +I S + +Q ++ E +
Sbjct: 131 VGDFLLGQAFKMMVEVGSLRALDILSSAAAVIAEGEVMQL------GAAKNTETTEDEYL 184
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KT L ACE G ++A ++E R +G NLGI FQL DD LD
Sbjct: 185 AVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGIAFQLVDDALDYGGTSA 241
>gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
Length = 377
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFLV 58
+ + ++ + + +L + + A M + + GGK +R L
Sbjct: 31 PDVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALA 90
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + T + A+E +H +SL+HDDL MD RR + TV + AI+
Sbjct: 91 LISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWKVHGPAQAIL 148
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A EI+ T L + + + +
Sbjct: 149 VGDALFALANEILLELGTPEAGR---ATRRLTRATRALIDGQAQDISYEHRDRVTVEECL 205
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL D
Sbjct: 206 EMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPE 262
>gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 386
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFLV 58
+ + ++ + + +L + + A M + + GGK +R L
Sbjct: 40 PDVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALA 99
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + T + A+E +H +SL+HDDL MD RR + TV + AI+
Sbjct: 100 LISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWKVHGPAQAIL 157
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A EI+ T L + + + +
Sbjct: 158 VGDALFALANEILLELGTPEAGR---ATRRLTRATRALIDGQAQDISYEHRDRVTVEECL 214
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL D
Sbjct: 215 EMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPE 271
>gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei
str. Twist]
gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma
whipplei str. Twist]
Length = 338
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+G L + R++ DLLL+T + L + GGK+ R LV
Sbjct: 15 SGSLSDDISPALDRVE----DLLLETVGDCHEIVSHLL-------VSGGKRARPLLVLLT 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + + +R A IE IH SL HDD+ MDN YIR G T H + + AI+AG+
Sbjct: 64 SCMGSGINDAVIRAAAGIELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + + Q M+ GQ+ + +
Sbjct: 122 FLFAKAGVL----------GLNLDKRAIAVQTEAFQRMISGQLSETLGISDSLDPLEAYI 171
Query: 182 KMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++ G + + + GAI+ AS + E LR FGE++G+ FQL DD++D K
Sbjct: 172 EVSRGKTGSLIAASAQVGAILGDASPSTLEPLRDFGESIGVAFQLVDDVIDLSGKSGK 229
>gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
Length = 324
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L K ID +++ + + T L +++ GGK++R LV A
Sbjct: 3 YLSTIRKPIDGDMNNFVELFKQSL-THGEGMLEQILKHIRERGGKRMRPMLVFLTARNLG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+E +H SL+HDD+ +D RRG+P+V+ Y+ A++ G+ +L+
Sbjct: 62 EISDVTQNAALGLELLHTASLVHDDV--VDESSERRGQPSVNAAYNNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A ++ ++L L LQ +D + + KT
Sbjct: 120 ALLRVALSDNHRIVQHLAELGRKLAAGEVLQLSNISNQDISEDVYYQ------VIDQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
L C GAI AS+ E+ FG N+G+IFQ+ DD+ D ++ K
Sbjct: 174 VLFESCCILGAISVGASEEMIEKAAKFGHNVGMIFQIRDDIFDYYDSAEIGK 225
>gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
Length = 282
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 8/185 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK++R L A A IE IH +L+HDD+ +D +RRGK T +
Sbjct: 2 GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 59
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++ G+ + T +F++++ + + S + + Q M +
Sbjct: 60 AAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE 119
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++
Sbjct: 120 ------ASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 173
Query: 229 DCEED 233
D D
Sbjct: 174 DYTSD 178
>gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115]
Length = 291
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 17 DTILDDL-LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
+ L+ + L+ + Q + L I Y++ GGK+IR L+ E F++
Sbjct: 4 NEKLEKIGLMIADFYKSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFDLELTEAHY 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+V +A+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L + +++
Sbjct: 64 QVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLAR 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + + LSL + + + I + I KTG L+ +
Sbjct: 124 AELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPF 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ ++A +++LR GE LG+ FQ+ DD+LD +L K
Sbjct: 184 VAAGLIAEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229
>gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
Length = 334
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 79/225 (35%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + H+ ++ + I + GGK +R L A L + ++ ++
Sbjct: 19 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 78
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + +D+ +RR + TV +Y + A+ G+ L T FE++
Sbjct: 79 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 138
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L M + KT L AC
Sbjct: 139 MNGSPFLKTNAQAMKRLLLGELDQMH-----TRYNIHESIDDYLQSINGKTAELFWLACL 193
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GA +ER G N+GI FQ+ DD+LD D KK
Sbjct: 194 EGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 238
>gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 328
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
+ + L + ++ + I + + GGKKIR LV + N + +
Sbjct: 16 VSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYSGENRIN 75
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V A++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT AF +
Sbjct: 76 VAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIEC 133
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+I S+ L Q +++ + D I KT +L CE
Sbjct: 134 GNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFD------IIGEKTASLFSACCE 187
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+LD +
Sbjct: 188 AASTVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 228
>gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 308
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 15/242 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M G L + +I++ L +L+ D L ++R++LL K++R+ L
Sbjct: 1 MGGQLDVYMM-LRAKIESRLAELVRLDGPL------DPLQGSLRHSLLAPAKRVRAVLTL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A AL + A+E IH SLI DDLP MDN RRG P+ H + E TAI+A
Sbjct: 54 VAARELGGRESDALDLACAVEMIHTSSLILDDLPCMDNAATRRGIPSNHRVFGEATAILA 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
GL+ A+ +++ +L + R++ + L ++GL+G++ GQ D+ D +
Sbjct: 114 SIGLMNRAYG-VAAASAKLSADQRAEAVGVLEWSVGLEGLVRGQHDDLADYRATMNEAQL 172
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD--CEED-L 234
+ KTGAL A E GAI+A+ +Q + +R FG +LG+ FQ+ DD+LD D
Sbjct: 173 ETMYAQKTGALFAAAAECGAIVAN-NQAARPAMRKFGLDLGVGFQILDDVLDAHATSDRA 231
Query: 235 PK 236
K
Sbjct: 232 GK 233
>gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
Length = 338
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+++ +R + ++ ++ + N + S GGK++R + A +F
Sbjct: 25 KDDMERANQLIISMIKSNIEMIPEICNHLISS-------GGKRLRPMITLAAAHMFGYQG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+
Sbjct: 78 DEHIKLATAVEFMHTATLLHDDV--VDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ ++ I S + +Q + D + I KT AL
Sbjct: 136 IMVDARSMEALAILSNAAAVIAEGEVMQL------AAANNIENDISNYLKIINAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E G I+A E+ LR +G +LG+ FQL DD LD D L K
Sbjct: 190 SAAAEVGPIIAGYGCEERSALRKYGTSLGLAFQLIDDALDYSGDAQHLGK 239
>gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
Length = 326
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 79/225 (35%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + H+ ++ + I + GGK +R L A L + ++ ++
Sbjct: 11 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + +D+ +RR + TV +Y + A+ G+ L T FE++
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L M + KT L AC
Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMH-----TRYNIHESIDDYLQSINGKTAELFWLACL 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GA +ER G N+GI FQ+ DD+LD D KK
Sbjct: 186 EGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 230
>gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
Length = 326
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 79/225 (35%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + H+ ++ + I + GGK +R L A L + ++ ++
Sbjct: 11 IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + +D+ +RR + TV +Y + A+ G+ L T FE++
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L M + KT L AC
Sbjct: 131 MNGSPFLKTNAQAMKRLLLGELDQMH-----TRYNIHESIDDYLQSINGKTAELFWLACL 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GA +ER G N+GI FQ+ DD+LD D KK
Sbjct: 186 EGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 230
>gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
Length = 282
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+++ K I D +++T + N+ Y+ GGK+IR+ L+ E +
Sbjct: 1 MEDFIKLIHN--DKSIIETRLNKVYADNNEFEKMCAYSFSVGGKRIRAILLLEAFKICRD 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A+ A+E IH YSL+HDDLP MD+ RRG +V+ +Y + A++ G+ LL A
Sbjct: 59 ISDIAIDFSVALELIHNYSLVHDDLPEMDDDKFRRGVLSVYGKYGQSNAVLVGDELLNNA 118
Query: 128 FEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
I+ + + + ++ G+ GM+ GQ LD+++ + + + I +
Sbjct: 119 NLIMFKAIKQLENIDEIKNAISASEIILNSSGINGMVYGQFLDLENNVENLSDIEKINSL 178
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KTG L A +GA + AS N+ L + +NLG++FQL DDL D +ED+ KK
Sbjct: 179 KTGELFKAAILAGAKLGGASDNDLAHLEIYAKNLGLVFQLQDDLFDYDEDVELNKK 234
>gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittHH]
gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae R3021]
gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittHH]
gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae 22.4-21]
gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
Length = 323
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 2 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 61 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 119 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 173 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 225
>gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
Length = 377
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFLV 58
+ + ++ + + +L + + A M + + GGK +R L
Sbjct: 31 PDVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGRPVSGDGGKAVRPALA 90
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + T + A+E +H +SL+HDDL MD RR + TV + AI+
Sbjct: 91 LISAEVTGASAGTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWKVHGPAQAIL 148
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A EI+ T L + + + +
Sbjct: 149 VGDALFALANEILLELGTPEAGR---ATRRLTRATRALIDGQAQDISYEHRDRVTVEECL 205
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL D
Sbjct: 206 EMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPE 262
>gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
Length = 327
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 17/233 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
+ + Q + ++ ++ D L + + Y + GG K++R L A
Sbjct: 9 AIQALAQSDMAAVNDLIYDQLQSDVALINQLG--------IYIVNGGGKRMRPMLTVLAA 60
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F L + A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 61 RAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETANALFGNSASVLVGDF 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T +F++++ +I S+ + LQ M + +
Sbjct: 119 LYTRSFQMMTKLGDMRIMDILSEATNIVAEGEVLQLMNCNDASTTE------ESYMQVIY 172
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A A++A ++ + +G+ LG FQL DD++D D
Sbjct: 173 CKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAK 225
>gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 322
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N + ++L E K ++ + + + LL IR + GK +R V
Sbjct: 8 NLEIKNELDEVIKIMEKRVKNSNRSIR--------NILLDMIRNS---GKMLRPAFVILS 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + AA+E +H +L+HDD+ +DN IRR KPT+ +Y + A+ G+
Sbjct: 57 GKFGEYDRRRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + F ++S T S+++ + GQ + I
Sbjct: 115 FLFSECFLLLSDNITIENLKKVSKVVSRICKGEI------GQFESRYNIDITINDYLKRI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT AL + GA ++ + + L G N+G+ FQ+ DD+LD +
Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLDYTGEE 221
>gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 337
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 15/237 (6%)
Query: 5 LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR--YALLGGKKIRSFLV 58
L +++ + + ++ L +L + ++ + L+ + + GGK++R+ L
Sbjct: 7 LKNQINDSYFQLKESVEDKL--VLTEEKIKLKLNSDVELVQKMTNYHIKTGGKRLRALLT 64
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + + AA + + + +D G IRRGK T++ + ++++
Sbjct: 65 LGSAKLCGYSKGSRDVNLAACVELIHGATLM-HDDVIDEGIIRRGKETLNEIWGNHSSVL 123
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL+ FE++ + S + LQ G++ + E
Sbjct: 124 IGDYLLSRCFEMMVEDGNLEVLKLLSSTSSKIAQGEVLQLQHKGEVD------MLEETYL 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L + + GAI++ EK+ L +G NLG+ FQ+ADD LD +L
Sbjct: 178 KIISAKTAELFAASTKVGAILSDVDNKEKDALEFYGRNLGLTFQIADDTLDYNSELK 234
>gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
Length = 323
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADNDMQNVNKLIYKQLESDVALINQLGFYIING-------GGKRMRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYKGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELGNMEVLEVLADATNVLAEGEVLQLMNCNDPDTTE------ESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A ++A + + L +G+ LG FQL DDLLD D
Sbjct: 166 VIYCKTAKLFEAATRLAGVLAQSPIEAQNALADYGKFLGTAFQLTDDLLDYTADTE 221
>gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis
NIES-39]
Length = 537
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 83/240 (34%), Gaps = 11/240 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
+ L+++ I + + + + + + L + Y GGK +R + A
Sbjct: 179 INQALEDSRIAIGAKIQEFIGRRREIIGSYEP--LYDLLLDYPFRGGKMLRPTMCISAAR 236
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAIIAGN 121
AL AA+E H LIHDD+ +G + I
Sbjct: 237 AMGGMGQVALSTAAALELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNV 296
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ E +S+ N+ ++ ++ Q M + + D M
Sbjct: 297 LAVGLLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCV 356
Query: 182 KMKTGALMCFACESGAIMAHAS---QNEKERL---RCFGENLGIIFQLADDLLDCEEDLP 235
K C G I+ ++S Q+ E L FG LGI FQ+ DDLL+ D+
Sbjct: 357 KKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMK 416
>gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 537
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 83/240 (34%), Gaps = 11/240 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
+ L+++ I + + + + + + L + Y GGK +R + A
Sbjct: 179 INQALEDSRIAIGAKIQEFIGRRREIIGSYEP--LYDLLLDYPFRGGKMLRPTMCISAAR 236
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAIIAGN 121
AL AA+E H LIHDD+ +G + I
Sbjct: 237 AMGGMGQVALSTAAALELYHNAFLIHDDIEDGSESRRGKGTLHHNIGIPRAINVGDATNV 296
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ E +S+ N+ ++ ++ Q M + + D M
Sbjct: 297 LAVGLLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFKMCV 356
Query: 182 KMKTGALMCFACESGAIMAHAS---QNEKERL---RCFGENLGIIFQLADDLLDCEEDLP 235
K C G I+ ++S Q+ E L FG LGI FQ+ DDLL+ D+
Sbjct: 357 KKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVGDMK 416
>gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
Length = 362
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 69/253 (27%), Gaps = 26/253 (10%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
I + + +H+ D L AI + GGK++R +T
Sbjct: 8 DAFQATISASITAQIADHRAHLTPIDPAADELAQAIESLMQGGKRLRPGFLTWGHVAAGG 67
Query: 68 N-----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + S P+ + +R + E
Sbjct: 68 SADEATLQAATAMEFFQAAALLHDDVMDDSDTRRGTPAAHRVWAQRHREHAFEGSPEDHG 127
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ----------MLD 166
I + T L T N+ ++ GQ
Sbjct: 128 IAGAILAGDLCLVWADAAFTGCGWEPEQMLRARPTWNLMRTQLMAGQFLDILNAARPWET 187
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + E ++Q + GA A ++ L +G +LG+ FQL DD
Sbjct: 188 LDTDARHERVRRVMQYKSAKYSIEHPLLIGADAAGVDPTTRQHLSDYGLHLGLAFQLRDD 247
Query: 227 LLDCEED---LPK 236
+L D K
Sbjct: 248 VLGVYGDPSVTGK 260
>gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2
[Turicibacter sp. HGF1]
gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2
[Turicibacter sp. HGF1]
Length = 321
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 15/225 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ++++ I++ L S M D A GGKKIR L + +
Sbjct: 13 AHLEQVNHIINQQLTVKQSKMNEILKDL-------AQSGGKKIRPGLCIIGGEFGDKDIK 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A +E +H +L+HDD+ +D+ RRG+ T +Y + A+ G+ + T FEI
Sbjct: 66 HLYHLSAVLEMLHMATLVHDDI--IDDSVQRRGQLTTQQKYGKDYAVYTGDYIFTKCFEI 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ S+ + + Q + + KT AL+
Sbjct: 124 LAEHYELHHMKELSKTVSRVCMGEI------DQFDGRFKSHTSVKKYLKVIGAKTSALLA 177
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA + + ++L G ++G FQ+ DD+LD D
Sbjct: 178 VSLSVGAYESGCDEKFCKKLGKIGLHIGNAFQIIDDILDYVGDAS 222
>gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7]
Length = 303
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ 71
+ L H+++ H + L GGK+ R L
Sbjct: 14 ERFESFLKNHHPHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQDEK 238
>gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Florida]
gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Puerto Rico]
gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Florida]
Length = 327
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + E+ + ++ ++ D S++ + L GGK+IR L+
Sbjct: 11 DLKSLVLEDLQAMEQLIVDTSNSDISYIADIVS-------HLMLSGGKRIRPILLLAVCK 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I+ G+ L
Sbjct: 64 MLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASILVGDFL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AF+ I S + S ++ Q + + + + I
Sbjct: 122 LAAAFQWIVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITR------EKYIEIISA 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL CES +++ + +E LR FG N GI FQ+ DDLLD
Sbjct: 176 KTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224
>gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 338
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 25 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASLFDYRG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 ENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + + + + + Q+ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALD------VLSSAACIIAEGEVLQLSVAKNMETTEDDYLSVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 190 AAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 239
>gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
Length = 336
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ +R++ + + + N + S GGK++R L A L
Sbjct: 24 ADMERVNATILSRTGSDVTMIPEVANHLISS-------GGKRLRPMLTLAMAHLTEYAGD 76
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL AF +
Sbjct: 77 GHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSARMLWGNEASVLVGDFLLGQAFRM 134
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + +I S ++ +Q ++ E + + + KT L
Sbjct: 135 MVEVGSLRALDILSAAAATIAEGEVMQL------AAAKNTATTEDEYLAVIRGKTAELFA 188
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
ACE G ++A + E+ R FG NLGI FQL DD+LD K
Sbjct: 189 AACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVLDYGGKAAK 234
>gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
Length = 325
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
+ + L + ++ + I + + GGKKIR LV + N + +
Sbjct: 13 VSSDLSAMNDFVFKNVNDEDAKLATDIISHLVRSGGKKIRPKLVFIICKMLNYSGENRIN 72
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V A++E IH +L+HDD+ +D R G T + + ++I+ G+ LLT AF +
Sbjct: 73 VAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIEC 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+I S+ L Q +++ + D I KT +L CE
Sbjct: 131 GNLNILSILSKASHLLVKGEIKQMTARFDPHTVRENYFD------IIGEKTASLFSACCE 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+LD +
Sbjct: 185 AASTVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 225
>gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
Length = 329
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVLDYSANAQALGK 231
>gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 323
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 15/225 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q++ + ++ ++ + L + + + GGK++R L
Sbjct: 11 QKDMQGVNALIGEQLSSDVALINQLG-------MYIVNSGGKRLRPLLAVLSCRALGYEG 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L T AF+
Sbjct: 64 RAHLSLATIIEFIHTATLLHDDV--VDESELRRGRKTANAVFGNEASVLVGDFLYTRAFQ 121
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + +I + + LQ M + + F + KT L
Sbjct: 122 MMVQLDSMTILSILADATNVIAEGEVLQLMNCNDPDTTE------ARYFDVIYGKTAKLF 175
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + ++ E+L +G LG FQL DDL+D D
Sbjct: 176 EAATQLAGVLTEQDSTVTEQLADYGRYLGTAFQLVDDLMDYTSDS 220
>gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
Length = 253
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 15/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + + + + ++ ++ L + + + S GGK++R +V A
Sbjct: 6 IRALVAHDIEAVNELIRKRLSSDVVLINRLGSYIINS-------GGKRLRPLVVLLAARA 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A +E IH +L+HDD+ +D +RRG+ T + +++ G+ L
Sbjct: 59 CSCRDHQHILLAAIVEMIHTATLLHDDV--VDESDMRRGRETARQIWGNGASVLVGDFLY 116
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE++ + I S+ ++ LQ + D + E + + K
Sbjct: 117 TRAFEMMVELQQTAVMGIFSRATNTIAEGEVLQLLNI------HDPDVTEERYREVIFRK 170
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T AL C A++ S ++ + +G +LG FQL DD LD +
Sbjct: 171 TAALFEAGCRLAALLGARSVQDQAAMAAYGRHLGTAFQLIDDALDYDG 218
>gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
Length = 377
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 84/255 (32%), Gaps = 20/255 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
+N + + EN +D +L+ + + D L + AL GGK++R+
Sbjct: 19 INTAIETLWAENMLGVDAVLNRHVHARGRRLADIDPDIAPLADYLVRALSGGKRLRAAFC 78
Query: 59 TECAS-LFNVNHLT-----------ALRVGAAIECIHCYSLIHDDLPSM----DNGYIRR 102
A + + + +S +P++ + +
Sbjct: 79 LWGARGAAGGDLPAGAVDAAAAIELFHLGALIHDDVMDHSDRRRGMPTVHRRFADRHTAD 138
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGML 160
G + + AI+AG+ L ++ E+++ + R++ + SL + + G
Sbjct: 139 GLAGDPEAFGQAVAILAGDLCLMWSDEVLADAVSAASPEIGQRARAVWSLMRDETVGGQY 198
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ ++ + G +A A + + G G
Sbjct: 199 LDMLAQATPTTSLTRTRLVLHYKSAKYTVAQPLRLGGALAGADDDLLDAYESLGLIAGEA 258
Query: 221 FQLADDLLDCEEDLP 235
FQL DDLL D+
Sbjct: 259 FQLRDDLLGVFGDVA 273
>gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
Length = 333
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN 68
++ I ++ D L Q + + D + + +Y GGK++R L+ A L
Sbjct: 12 AREIFDLIQDDLEQVEKKITAESVASVDAVTAIGQYLQSAGGKRLRPALLLLSAKLVGNG 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+A+++GA +E IH +L+HDD+ +D RRG+P+ ++++ T ++AG+ L AF
Sbjct: 72 GPSAIQLGAVVELIHAATLVHDDV--IDTAQTRRGRPSTNVKWGNHTCVLAGDWLYMQAF 129
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I ++ ++ L + LQ G++ + + KT L
Sbjct: 130 QIALRERSFQMLDLLIGLTQMMVEGELLQLERIGRINVSE------ADCMELVDRKTACL 183
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G + H +E+L + NLG+ FQL DD+LD
Sbjct: 184 FSVCARLGGLCGHTDPQTQEKLGEYAWNLGMAFQLVDDVLDFTS 227
>gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
Length = 324
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
M+ + + +++ ++ ++ + L + + Y + GGK++R L
Sbjct: 2 MDMQSINALAKDDMLGVNALIGEQLQSDVALINQLG--------LYIVNSGGKRLRPLLA 53
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
++ IE IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 54 ILACRALGYEGNDHRKLATIIEFIHTATLLHDDV--VDESELRRGRKTANAVFGNEASVL 111
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L T AF+++ + I + ++ LQ M + F
Sbjct: 112 VGDFLYTRAFQLMVDLDSLRILRILADATNIISEGEVLQLMNCNDPDTSE------ASYF 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A E ++ + ++L +G LG FQL DDL+D D
Sbjct: 166 NVIYGKTAKLFEAATELAGVLTAQDEKVTQQLADYGRYLGTAFQLVDDLMDYTADSE 222
>gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
Length = 350
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 89/232 (38%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L +KL++ I+ +L QT + L +A GGK++R L + L
Sbjct: 24 LETKLRDALDDIEQMLVQ-ETQTQREKTSALVSHLRAA------GGKRMRPLLTLLVSQL 76
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + +V + L MD +RRG P H+Q++ A++AG+ +
Sbjct: 77 GAPDQPVSSQVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLI 136
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A ++S + + + + +
Sbjct: 137 FSRASLLVSGLNPTIVAQHSRTFERLCQGQMR-------DIFGPDSHDDPIEFYIDVLRD 189
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA ++ + FGE+LG+ FQ+ADD+LD +
Sbjct: 190 KTGALIGCAALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEA 241
>gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999]
Length = 294
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 9/221 (4%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
LL Q H T LL+A+ YALLG GK++R L++ + V+ + AIEC
Sbjct: 17 LLSQCIRHYPT-LPCDLLAAMEYALLGQGKRMRPLLISLVGDVLGVSKEKLAPLMVAIEC 75
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSL+HDDLP MD+ +RRG PT HIQY TAI+ G+ L + AFE ++ L +
Sbjct: 76 IHAYSLVHDDLPDMDDDDLRRGMPTCHIQYTPGTAILVGDALQSLAFEHLA-QHPVLSAS 134
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFAC-ESGAI 198
+ ++ L G +GM GGQ +D+ D + + ++KTGAL+ A+
Sbjct: 135 EKVAVIQILAKASGYEGMCGGQAIDLHFTNQDIDLETLTQLHRLKTGALLGACVDMVIAL 194
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + L F +LG+ FQ+ DD+LD D L K
Sbjct: 195 VPSLDVEHQALLHTFSRSLGLAFQVQDDILDITSDSDTLGK 235
>gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
Length = 320
Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ + + RL + YAL GGK +R LV CA + L A RV AAIE +H
Sbjct: 8 RVLAEAVAATDPRLQELLDYALEGGKGLRPTLVFLCARFGIYDALEAGRVAAAIELVHLA 67
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+HDD+ +D +RR +P ++ Y V A++ G+ L AF +++ +
Sbjct: 68 SLVHDDI--LDGAAVRRNRPALYRAYGTVPAVLTGDYLFATAFGLLAKG----------K 115
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+ T ++ M G++ ++ F KT AL+ AC GAI+ +N
Sbjct: 116 KAVLYTVTEAIRSMCSGEIGQLKGGLAGPEAYFTYIGQKTAALISAACRCGAILGRVKRN 175
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
++E L FG +LG+ +Q+ DD LD
Sbjct: 176 QQECLAQFGWHLGLAYQIVDDCLDLFG 202
>gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30]
Length = 303
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829]
gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
Length = 366
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 64/249 (25%), Gaps = 16/249 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC 61
+ LQE I L L + S QT L + + + GGK IR L
Sbjct: 15 TFTTFLQETLPYIVHALTQSLQEPLDSQAQTDLQAYLYQPLAHFTVNGGKLIRPALCVLG 74
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + I + +
Sbjct: 75 AYACGYEGMLKDNCSIQKSVSDTLLQISCAFEHFQAAALIHDDIADESLLRRGKPCLYRV 134
Query: 122 GLLTYAFEI--------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-----MLDIQ 168
A + + + + ++ L + + GQ +
Sbjct: 135 HGTGLATNMGDSALVHALECINSLSGISDELRVRLIQEFITMEKHTIEGQALDVGWSNEN 194
Query: 169 DEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
I + GA+ A ASQ E LR +G G+ FQL DD
Sbjct: 195 RWDISLDDYLYMATSKTAYYSASTPLVIGALFAGASQKRSEALRAYGLQAGLAFQLKDDE 254
Query: 228 LDCEEDLPK 236
L+ D K
Sbjct: 255 LNLFGDANK 263
>gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
Length = 335
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLV--------------------TECASLFNVNHLT 71
+ LL A RY + G GK +R LV + ++
Sbjct: 42 AELPSPLLDACRYVMTGTGKLVRPLLVASAFASTYSHNDTIADKDNALATLLENDSDYDM 101
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ R A+E +H YSL+HDDLP MD+ +RRG+PT HI + E TA++AG+ L T AFE++
Sbjct: 102 SRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVL 161
Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGA 187
+ T + L + M+ GQM I ++ + I + KTGA
Sbjct: 162 TAEMPTFAPFDSDIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGA 221
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ A G I A A+ ++ L+ +++G+ FQ+ DD+LD
Sbjct: 222 LIEAAMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDVT 265
>gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
51756]
gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
51756]
Length = 322
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 90/236 (38%), Gaps = 16/236 (6%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + ++ + + ++ ++ + + + + GGK++R ++
Sbjct: 1 MDFDTVKGLVEADMQAVNRVIHEQIQSGVPTIPAMGAYLIN-------AGGKRLRPIILL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A +E IH +L+HDD+ +D +RR T + + A++
Sbjct: 54 LAARMGGERGPRPIPLAAVVEFIHSATLLHDDV--VDGSELRRNHATANQLWGNAAAVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L +FE++ ++ ++ Q F
Sbjct: 112 GDFLYARSFEMMVEDGDMRIMATMAEATSVISQGEVAQLENADDPDLDA------EAYFA 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A GAI+ ++ L +G +G+ FQL DD LD + +
Sbjct: 166 VIAAKTAKLFEAAARIGAIVNAMEPEQELALARYGSLVGVAFQLMDDALDYQAEAA 221
>gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 354
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 88/234 (37%), Gaps = 29/234 (12%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----- 67
++++ LD L T + L GGK++R L + L +
Sbjct: 31 LEQVEEQLDGALGFDDLFSDTAAHHLLA-------AGGKRVRPVLTVLASLLGDPALASG 83
Query: 68 ---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ R A + + + ++ MD +RRG P H + AI+AG+ +
Sbjct: 84 EVADVDAPARQAAVVMELTHLATLY-HDDVMDEAPVRRGAPAAHRLWGNSAAILAGDLIF 142
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A ++++ + + ++ GQ+ + + + +
Sbjct: 143 ARASQLMAELGPRPVQ----------IQADTFERLVQGQLWETRGPAEGADPIEHYYAVL 192
Query: 185 TGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+G + A GA++ A + + + +GE +G+ FQLADDL+D D
Sbjct: 193 SGKTGSLIAAAGMLGALLGGADEAAVQVMSAYGEKVGLAFQLADDLIDLTGDAE 246
>gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
15641]
gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
15641]
Length = 354
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 77/240 (32%), Gaps = 9/240 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC 61
L + ++ +++ + + + N L + RY+ GGK+ R +
Sbjct: 21 ETFEDYLASYADQVGDLVNRFIPRGSH---PDMNKYLYDPLLRYSRNGGKRHRPLICFAA 77
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ AL AAIE H +LIHDD+ +
Sbjct: 78 CRAVGGDLDRALSAAAAIEHFHTAALIHDDIADEAELRRGEPCLHLTEGLGLAINAGDLG 137
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++ +R L ++G + + +++
Sbjct: 138 LSLVNGT-VMEDDALDDATKVRVVSELITMTRRTIEGQALDIGWARDGRYDITPEDYLVM 196
Query: 182 --KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GAI+ ++ E E LR +G + G+ FQ+ DDLL+ KK
Sbjct: 197 ATHKTAHYSGAVPLAIGAIVGGGTEGEIEGLRNYGLDTGLAFQIQDDLLNLIGAEEATKK 256
>gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
SK121]
gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
SK121]
Length = 379
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 73/246 (29%), Gaps = 25/246 (10%)
Query: 16 IDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ L D + S++ + + + + + L GGK++R +
Sbjct: 32 FEAALRDFFDSRRELVSNIGGGYEEAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGK 91
Query: 73 ---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ I S P++ + + +
Sbjct: 92 NADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFENQHRDEEWSGDSAHFGE 151
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L A + + + +S + +LGGQ LDI +E + V
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPEAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 178 FMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + GA + A + R FG ++GI FQL DDLL D
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELVDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 234 ---LPK 236
K
Sbjct: 272 PSVTGK 277
>gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Mississippi]
gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
Virginia]
Length = 327
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + E+ + ++ ++ D S++ + L GGK+IR L+
Sbjct: 11 DLKSLVLEDLQAMEQLIVDTSNSDISYIADIVS-------HLMLSGGKRIRPILLLAVCK 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I+ G+ L
Sbjct: 64 MLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASILVGDFL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AF+ I S + S ++ Q + + + + I
Sbjct: 122 LAAAFQWIVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITR------EKYIEIISA 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL CES +++ + +E LR FG N GI FQ+ DDLLD
Sbjct: 176 KTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224
>gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20]
Length = 303
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNRQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 283
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 118/234 (50%), Gaps = 17/234 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L ++ LD+ L N L +A+ Y++ GGK++R L+ ++++
Sbjct: 5 LAGWRTAVEQTLDEQLA-------AVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA+E +H YSLIHDDLP+MD+ +RRGKPT H Q+ E AI+AG+ LLT A
Sbjct: 58 VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
F I+S + + L G GM+GGQ +D ++E + + + KT
Sbjct: 118 FAILSRQYP----EKGAACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ A G ++ + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 174 GALIQAAIAMGGLLVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227
>gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
Length = 363
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 15 RIDTILDDLLLQTASHMQT---QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+I L D + + + + + + + +Y L GGK+IR L A +F+
Sbjct: 42 KIQQDLKDAVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 101
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L + +F++
Sbjct: 102 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 159
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + +I++ +L+ I +G + + + I + I K KT L
Sbjct: 160 MVA-----SGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 214
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
ACE GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 215 AACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 256
>gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
IFM 10152]
Length = 383
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 70/248 (28%), Gaps = 22/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIR-YALLGGKKIRSFLVTECASLFN 66
E + +L D ++ + A+ + L GGK+ R
Sbjct: 30 AEFVASVQAVLSDFFTSRRPAVRALGPVFEEAADALEAFVLRGGKRTRPAFAWTGWLGAG 89
Query: 67 VNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ + I S P++ + +R +
Sbjct: 90 GSPTAPEADAVLTACAALELVQACALVHDDIIDSSRTRRRFPTVHVDFEQRHRERGWTGD 149
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ + A + + + + +LGGQ+LDI E
Sbjct: 150 PAHFGVSVAILIGDLALAWADDMVHASGLDAAAIGRFAPVWALMRTEVLGGQLLDINGEA 209
Query: 172 IDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ V ++ + GA +A A R FG ++G+ FQL DDL
Sbjct: 210 GRDDSVEAALRINRYKTAAYTVERPLHLGAAIADADAELVAAYRTFGTDIGVAFQLRDDL 269
Query: 228 LDCEEDLP 235
L D
Sbjct: 270 LGVFGDPE 277
>gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8]
gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8]
Length = 272
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 16/226 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHL 70
++++ + ++L + A+ Y+ +GGK+IR LV V
Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL
Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGL-----FF 109
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + N + S T L G + + + + V + KTGAL
Sbjct: 110 LAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEVSQEMVERMYAFKTGALFA 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F + I+ + + L GE G+ FQ+ DDL D K
Sbjct: 170 FCFSAPFILKGKDHTKMKLL---GEKFGVAFQIYDDLKDILGSFEK 212
>gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
Length = 334
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLL---SAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ +L D L S Q + + +Y + GG K+IR ++ A
Sbjct: 11 EVFDLLRDDLAAIESEFAHQSDSPVEVVTDIAQYLIAGGGKRIRPMMLLLSARAVGCESE 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+R+GA +E +H +L+HDD+ +D RRG+P+ + + ++AG+ L +F+
Sbjct: 71 ARIRLGAVVEMLHTATLVHDDI--IDEASTRRGRPSSNTTWGNAKCVLAGDWLYMQSFQT 128
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ L + LQ G +++ + F + KT L
Sbjct: 129 ALAERNFRILDLLISLTQQMVEGELLQMEKLGHLINE-------EEYFDLIYRKTACLFK 181
Query: 191 FACESGAIMA------HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + GA++A +A+ E E L +G NLG+ FQ+ DD+LD
Sbjct: 182 VSMQLGAVIAVPPTTPNAAPFE-EALGEYGRNLGLAFQIVDDVLDLTA 228
>gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652]
gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652]
Length = 346
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 33 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASLFDYRG 85
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 86 ENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 143
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 144 MMVDVGSLDALDVLSSAACVIAEGEVLQL------SVAKNMETTEDDYLAVIRAKTAALF 197
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 198 AAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 247
>gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium
MedeBAC82F10]
Length = 299
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+++ SK+ D L + + AS + R+ ++ Y + GGK+IR FL+T SL
Sbjct: 9 EKHIKDFSKKFDQTLLSHISKQAS-----VDKRIKQSMVYFVKTGGKRIRPFLITTMGSL 63
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+EC+H +SLIHDDLP+MDN RRGK TVH ++DE TA++AG+
Sbjct: 64 IGIKSQILNDFALAVECVHLHSLIHDDLPAMDNDDYRRGKLTVHKKFDEATAVLAGDMFQ 123
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ + + K+ + + + N + G + + + + +K
Sbjct: 124 VLSVKTLVDSKSLSANQKVEAIQMLSKANGLEGLIAGQSLDIYMKKKSSVKDIETMYLLK 183
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
TGAL + + + + L+ G+ +G IFQ+ DD+LD D K
Sbjct: 184 TGALFSLCFNLLLTVKKLNAQKAKDLKIIGDTIGKIFQVTDDMLDRWGDEKK 235
>gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20]
gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae RdAW]
gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName:
Full=All-trans-octaprenyl-diphosphate synthase; AltName:
Full=Octaprenyl pyrophosphate synthase; Short=OPP
synthase
gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd
KW20]
gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae RdAW]
gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866]
Length = 329
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGK 231
>gi|332968796|gb|EGK07844.1| geranyltranstransferase [Psychrobacter sp. 1501(2011)]
Length = 315
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 29/256 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
S Q+ + T +D LL + L A YA+ G GK++R +
Sbjct: 7 NFESLSQQVIATLSTDIDTLLSH------AELPSPLKEACHYAMTGQGKRVRPLMAACAY 60
Query: 63 SLFNVNH----------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
++ R A+E +H YSLIHDDLP MD+ +RRG+PT
Sbjct: 61 HTVIYSNTAVDSGAETLSDSVLTDNCRRAMLAVEFLHTYSLIHDDLPCMDDDDLRRGRPT 120
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
HI++DE TA++ G+ L T AFEI+ + + + L + M+ GQML
Sbjct: 121 CHIKFDEATAMLTGDVLQTLAFEILTADIEGFQPISDEQAAKLLTVFAPRARRMVSGQML 180
Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
D+ ++ I + ++ I + KTGAL+ A G + A AS + + F N+G+ FQ+
Sbjct: 181 DLNAENKEITQAELEAIHRDKTGALIEAAVLMGGVCAEASAEQLAAMTQFATNIGLAFQV 240
Query: 224 ADDLLDCEED---LPK 236
DD+LD L K
Sbjct: 241 QDDILDVTASTDILGK 256
>gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 362
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
A+ GK IR +V + A+R AA+E +H ++L+HDD+ +D + RR +P
Sbjct: 74 AVGAGKSIRPAMVLAATTAVGGRPQDAVRAAAAVELVHNFTLLHDDV--IDRDHTRRHRP 131
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
T + AI+AG+ + + A +++ + + + L
Sbjct: 132 TAWRVFGTTGAILAGDAMHSLALRVLAEDP---HPAAAAAVRRLADCVVELCAGQQADCS 188
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
Q + + + + KTGAL+ AC GA+ A A + + FG +G+ FQL D
Sbjct: 189 FEQRTDVTLAECLTMAEGKTGALLGCACALGALYAGADAETADAMDAFGREIGLAFQLID 248
Query: 226 DLLDCEEDLP 235
DL+ D
Sbjct: 249 DLIGIWGDPA 258
>gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea]
gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase
gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea]
Length = 323
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 10/225 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + S T+H +A GGK++R +V A +
Sbjct: 11 IEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQQEIKPGQ 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
E ++ +D RRG+ TVH ++ A++AG+ L + +++
Sbjct: 71 RRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSSWYLANI 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ ++++ QG++ KT +L+ +C
Sbjct: 131 GNLEVVKVITKVITDFAEGEIRQGLVHFDPSISI------DDYIEKSFYKTASLVAASCR 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A++ + L +G+++G+ FQ+ DD+LD L K
Sbjct: 185 GAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGK 229
>gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
Length = 367
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 84/255 (32%), Gaps = 20/255 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------L 48
+ L + L + + ID+ L + A T + +RY L
Sbjct: 3 LTSTLQATLLRHQQAIDSALHSAFERLAERDDTHNLQEYYGQMRYHLGWVDRHFQATRSN 62
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH------CYSLIHDDLPSMDNGYIRR 102
GK +RS L+ T+ ++ +D RR
Sbjct: 63 PGKLMRSTLLLLAYEAVGAWEQTSNPDYLRRALPAAAAVELTHNFTLIHDDIVDGDTERR 122
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
+PT+ + I +G+G+ + + + + + + + L G
Sbjct: 123 HRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEGVEADIAARLGACLDKACLVVAEGQ 182
Query: 163 QMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + D + + + KT LM + E GA + RLR FGE +GI
Sbjct: 183 YLDMSFEGRQDISVAMYIDMIRRKTAELMACSAEMGARLGTRDAEAIARLRSFGEAIGIA 242
Query: 221 FQLADDLLDCEEDLP 235
FQ+ DDLL
Sbjct: 243 FQVRDDLLGVWASSE 257
>gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2]
gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2]
gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
Length = 272
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 16/226 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHL 70
++++ + ++L + A+ Y+ +GGK+IR LV V
Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL
Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGL-----FF 109
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + N + S T L G + + I + V + KTGAL
Sbjct: 110 LAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEISQEMVERMYAFKTGALFA 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F + I+ + + L GE G+ FQ+ DDL D K
Sbjct: 170 FCFSAPFILKGKDHTKMKLL---GEKFGVAFQIYDDLKDILGSFEK 212
>gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16]
Length = 303
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 336
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 49/277 (17%)
Query: 1 MNG--GLPSKLQENSKRIDTILDDLLL------------------------------QTA 28
MN + L+ + I+ +L D L Q A
Sbjct: 1 MNTRTDFLNLLKNMIESINAVLADTLPRAAVEAVIRGQNLCSTAAEWQGYFSKYRAEQEA 60
Query: 29 SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAA--------- 78
+ + L AI YA L GGK++R L + + L
Sbjct: 61 AGNGDKTVSELDLAITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYLIRA 120
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP+MDN +R G+PT+H + E AI+ G+ LL+ A++ +
Sbjct: 121 VESIHIYSLIHDDLPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATKTDNVE 180
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I +Q L++ H + L D+ + + + K KT AL+ + A
Sbjct: 181 AGMILAQNALAMVHGQW-------RDLAFTDQKVTYQDLCEMVKRKTAALIAAPVLAAAT 233
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A K +L F ENLGI FQ+ DD+LD E +
Sbjct: 234 LTEADAPTKRQLSQFAENLGIAFQIRDDILDVEAESE 270
>gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
Length = 323
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 2 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 61 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 119 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSETNYMR------VIYSKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 173 RLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 225
>gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
Maries]
gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
Maries]
Length = 327
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + E+ + ++ ++ D S++ + L GGK+IR L+
Sbjct: 11 DLKSLVLEDLQAMEQLIVDTSNSDISYIADIIS-------HLMLSGGKRIRPILLLAVCK 63
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + +R+ AAIE IH +L+HDD+ +D +RRG T + + +I+ G+ L
Sbjct: 64 MLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASILVGDFL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AF+ I S + S ++ Q + + + + I
Sbjct: 122 LAAAFQWIVSCGNFELLTVLSGASRTIVAGEIQQMVYSKNLDITR------EKYIEIISA 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL CES +++ + +E LR FG N GI FQ+ DDLLD
Sbjct: 176 KTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224
>gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 361
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 69/240 (28%), Gaps = 22/240 (9%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
R+D L++ + + ++L GK++R
Sbjct: 20 RLDAALEEFFAARPDA--GLAPELVGEISELSVL-GKRVRPIFAWCGWLAAGGAETGPES 76
Query: 75 VGAAIECIHCY---SLIHDDLPSMDNGYIRR----------------GKPTVHIQYDEVT 115
+ MD RR Y +
Sbjct: 77 DAVVRALVALELLQVCALVHDDVMDRSTTRRGRAAAHVAFAARHRRLRWSGDPKHYGDCA 136
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ G+ L ++ + I + + R+ + + G + + E E
Sbjct: 137 AVLVGDLALAWSDDAIVTAGLEPAALSRAWVAWQAMRVEMMAGQHLDLLAGARREESLEQ 196
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + GA MA A E LR FG ++G+ FQL DDLL D
Sbjct: 197 ALRVAALKTAAYTVERPLHLGAAMAGAGPELVEALRSFGRDIGVAFQLRDDLLGVFGDPG 256
>gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1]
Length = 311
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 29/247 (11%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV-------TE 60
+ I+T+L+ L L A YA+ G GKK+R LV
Sbjct: 16 ISTLQADIETLLNHANL----------PSPLHEACHYAMTGQGKKVRPLLVASSYLTVLA 65
Query: 61 CASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ ++ R A+E +H YSLIHDDLP MD+ +RRG+PT HI++ E T
Sbjct: 66 SSQAATIDTLPLFDDNCRRAMLAVEFLHTYSLIHDDLPCMDDDDLRRGRPTCHIKFGEAT 125
Query: 116 AIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFI 172
A++AG+ L T AFE + + + L + M+ GQMLD+ ++ +
Sbjct: 126 ALLAGDVLQTLAFEALSADLPGFAPISNDKAASLLTLFAPRARRMVSGQMLDLNAENKQV 185
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ Q+ I + KTGAL+ A GA A A+ + + + F N+G+ FQ+ DD+LD
Sbjct: 186 SQPQLEAIHRDKTGALIEAAVLMGAACADANDTQYQAITSFASNVGLAFQVQDDILDVTS 245
Query: 233 D---LPK 236
L K
Sbjct: 246 STDTLGK 252
>gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
SH205]
gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
SH205]
Length = 325
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Query: 48 LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK++R + A VN A + A IE +H +L+HDD+ +D +RRG+PT
Sbjct: 45 AGGKRMRPIMCLLAAKACGLVNMQQAQHLAAIIEMLHTATLVHDDV--VDESNLRRGRPT 102
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+ ++ TA++ G+ L+ +F+++ S + LQ
Sbjct: 103 ANATWNNQTAVLVGDFLIARSFDLLVDLNNITLLKDFSTGTCEIAEGEVLQL------QS 156
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
E I KT L A E AI+A ++ +E LR F + G FQ+ DD
Sbjct: 157 QHQPETTEETYLRIIHGKTSRLFELATEGAAILAG-TEEYREPLRRFAGHFGNAFQIIDD 215
Query: 227 LLDCEEDLP 235
+LD D
Sbjct: 216 ILDYTSDAE 224
>gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 524
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 15/228 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S ++ + + +D ++ L + + + GGK++R L+ C
Sbjct: 13 SIVEPDMREVDRVIAQRLDSGVPLVGSVSQYIIS-------AGGKRLRPALLLLCCGALG 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A +E IH +L+HDD+ +D+ +RRG PT + ++ +++ G+ L +
Sbjct: 66 YKGEQRFNMAAVVEFIHTATLLHDDV--VDDSDLRRGAPTANARFGNPASVLVGDFLYSR 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF+++ ++ + + ++ +Q M + +DE + + KT
Sbjct: 124 AFQMMVDAQSMRIMQVLADATNIISEGEVMQLMNM------HNAALDEAGYLQVIRSKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L + GAI++ AS+ +E FG+ +G FQ+ DD+LD D
Sbjct: 178 KLFEASARVGAILSQASETHEEACAEFGQAMGTAFQVIDDVLDYAGDA 225
>gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
Length = 340
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++ +R+D ++ + L + + L+ A GGK++R + A
Sbjct: 20 EALARLAHDDMRRVDALILERLDSHVELIP-ELARYLIEA------GGKRVRPMITVAAA 72
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ + + L++ AA+E IH +L+HDD+ +D +RRGK ++ + ++++ G+
Sbjct: 73 NMIGHSDIAPLKLAAAVEFIHTATLLHDDV--VDESGMRRGKAAANLVWGNASSVLVGDF 130
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L +F ++ + + S ++ Q ++D + I
Sbjct: 131 LFARSFSLMVEAGSMRALGVLSDAASTIAEGEVRQL------SAVKDVGVSVETYMQIID 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT AL A + I+A NE+ L +G LG+ FQL DD LD K
Sbjct: 185 AKTAALFAAAAQVSGIVADRPANEETALETYGRELGLAFQLVDDALDYSGASAK 238
>gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
[Coriobacterium glomerans PW2]
gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Coriobacterium glomerans PW2]
Length = 363
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVT 59
++ L + ++ + D + + L + + R++ GGK+ R +
Sbjct: 28 VSTSFADFLAAEHQDLERRIADFFCDRTD--RADIDAYLYAPLARFSRNGGKRHRPLICM 85
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + AL V AIE +LIHDD+ N V
Sbjct: 86 LAARAVGGDAAAALDVATAIEHFQSAALIHDDIADRGNTRRGAPCLHVTEGEGIAINCGD 145
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ A + + + ++ +T L +
Sbjct: 146 LELISMTAAVLDDANLGDELKIRLLRELVEMTRRTIEGQALDLGWARDARYDLTVEDYLD 205
Query: 180 IQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL---------- 228
+ + GAI + + E LR FG G+ FQ+ DDL+
Sbjct: 206 MATRKTAWYSGAVPLACGAIAGGGCEVQVEGLRSFGLACGLAFQIQDDLINLQPLDGGGK 265
Query: 229 DCEED--LPKK 237
D D K+
Sbjct: 266 DVRSDITQGKR 276
>gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK]
gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 359
Score = 94.5 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 81/254 (31%), Gaps = 20/254 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIR-YALLGGKKIRSFL 57
M+ PS + E ++ L + L + + L A+ + L GGK++R
Sbjct: 1 MDAAAPSAV-ELVNAVNEELREYLRGRRRDAAYIGTDYAVLTEALEEFVLRGGKRLRPAF 59
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-- 115
+ ++ +D RRG PTVH + E
Sbjct: 60 AYWGFRAVAGTEPEPHIMRLFSALELLHACALVHDDLIDASATRRGLPTVHRIFSERHRS 119
Query: 116 --------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
AI+ G+ L +A +II+ + R Q + + L G
Sbjct: 120 NNWLGSSDQFGLSAAILLGDLSLVWADDIIAEAPIDDAAHRRVQRVWAAIRTEVLGGQYL 179
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + + + + + + GA A E G +LG+ F
Sbjct: 180 DIVNEASGSETVASALTVNIYKTASYTISRPLQLGAAAAGDRPEILEAFHELGTSLGVAF 239
Query: 222 QLADDLLDCEEDLP 235
QL DD+L D
Sbjct: 240 QLRDDVLGVYGDPA 253
>gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d]
Length = 303
Score = 94.5 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13]
gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13]
Length = 290
Score = 94.5 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 123/220 (55%), Gaps = 3/220 (1%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+ S ND AI+YA+ GGK+IR++L+ F ++ +GA+
Sbjct: 10 FKSEFNKFLSLQIPNSNDINHKAIKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGAS 69
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH YSL+HDDLP MD+ +RRGK T H ++DE A++ G+ L + AFE++SS K ++
Sbjct: 70 IEMIHAYSLVHDDLPCMDDDDLRRGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKI 129
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESG 196
++ + + L +IG +GM+ GQ LD+ E T+ + I + KTG L+
Sbjct: 130 DPELKLECINLLASSIGSKGMVLGQSLDMIYEKKKPTKKIIEKIHRNKTGMLISTCILIP 189
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+I++ + + L+ ENLG+++Q+ DD LD D+ K
Sbjct: 190 SIISRQRNSTHKNLKILSENLGLLYQMVDDYLDATSDVEK 229
>gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470]
gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470]
gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464]
Length = 303
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424]
gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424]
Length = 286
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
MN + EN ++ + +T + L +I Y+L+ GKKIR
Sbjct: 1 MNK-FQVFIDENKDILNDFAKKYIEKTD------MPELLKKSISYSLVNDGKKIRPLSFL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + V AIE +H YSL+HDDLP MDN R GK T H + + A++
Sbjct: 54 YLLKYYGEDFAEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDVAVLT 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +LT AFE++S+ + ++ + + ++ ++ +
Sbjct: 114 GDAMLTLAFEVLSNSNIKPDLKVKLISQFANYSGAMGMIAGQIYDIKQKEYEVNADYLRR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTG L+ + +A E + FG+ LGI +Q+ DD+LD D
Sbjct: 174 MHSLKTGKLIELPLDFACQIAGK-VEELSDINSFGKELGIAYQIKDDILDYYGDFE 228
>gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp]
gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp]
Length = 322
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ +D I+ ++ ++ D ++SA GGK++R LV
Sbjct: 10 VADDFTAVDGIIRQQVVSRVPLVEKIG-DYIISA------GGKRLRPLLVLLSGRALGYQ 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE +H +L+HDD+ M + +RRG+ T + Q+ +++ G+ L + +F
Sbjct: 63 ADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTANAQWGNAPSVLVGDFLYSRSF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I S + LQ ++D E + + KT L
Sbjct: 121 EMMVELGSMPVMKILSHATRVIAEGEVLQL------SKVRDASTTEETYMEVIRGKTAML 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A +A A++ ++E LR FG++LGI FQL DDLLD + D L K
Sbjct: 175 FEASTHSAAALAGANEAQREALRTFGDHLGIAFQLVDDLLDYKGDAAELGK 225
>gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
proteobacterium]
Length = 295
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTA 72
RI+ + D + + +L SA+RYA+ GG +IR ++ A+ +
Sbjct: 6 RIEAAISDAVNLGQT---APSPAKLASALRYAVSPGGARIRPTILMSVAAACGDDRPELT 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
AA+ECIHC SL+HDDLP D+ RRGKP++H Y E A++AG+ L+ AF+I++
Sbjct: 63 NAAAAALECIHCASLVHDDLPCFDDAETRRGKPSLHRAYSEPLAVLAGDSLIVMAFQILT 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + GM G E + + + KTGAL A
Sbjct: 123 RHASIDPQRAIGLMNILAEQ----TGMPNGICAGQGWESEQKIDLRAYHRAKTGALFVAA 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ GAI A + + L G +G FQ+ADDL D E +L K
Sbjct: 179 TQMGAIAAGQDGAQWDEL---GSRIGEAFQVADDLRDALYNEAELGK 222
>gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
Length = 297
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L + +I+ IL++ + L +A+ Y++ GGK++R L
Sbjct: 1 MATNLTDFERLWVPKINQILENDIK------PDTDQTTLEAAMIYSVNAGGKRLRPLLTL 54
Query: 60 EC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
ASL + T L+ A+E +H YSLIHDDLP+MDN +RRGKPT H+++ A +
Sbjct: 55 AVLASLGDPIDQTVLKTSCALELMHSYSLIHDDLPAMDNDDLRRGKPTNHVKFGAGMATL 114
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+GL AF+ + + L L+ ++ + + + +
Sbjct: 115 AGDGLQPLAFQWLVDNDLDSQTQAELTLALAKAAGPHGMVSGQADDIEFEGTRLSLSGLQ 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ +A E+G IM +++ L F E G +Q+ DD+LD
Sbjct: 175 KLDRNKTGALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIYDDILDVVGTEA 231
>gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 341
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 83/220 (37%), Gaps = 12/220 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
LD L S + + S Y + GK+IR LV N L
Sbjct: 28 AALDTFLAGQISAFE----PEIRSMADYCIDTSGKRIRPALVFLGGWRGNGMVAPDLVRV 83
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
AA+ + + + MD +RR + T ++ A++ G+ L +A + + T
Sbjct: 84 AAVVELVHLATLV-HDDIMDGAEVRRNRRTAAREFGAAGAVLLGDALFAHALHLAAQFPT 142
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
S+ + +Q + G + F I +KT L +C G
Sbjct: 143 TEVCAAVSESTRRVVSGEIVQTLRRGTTNVSR------ADYFRIIDLKTAELFRVSCFLG 196
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A +A ++ E + FGE+LG+ +Q+ DDL D K
Sbjct: 197 ARLAGSAPGYVEAVSRFGEHLGVAYQIYDDLADYFGQEAK 236
>gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 345
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+ + + I IL+DL++ + + +Y L GGK+IR L A +
Sbjct: 73 TADQAKYKELI--ILNDLIISCLKS----DEELIEKVGKYLLEAGGKRIRPLLTIITAKM 126
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT +I + T+I+ G+ L
Sbjct: 127 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLF 184
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ +I++ +L+ I +G + + + I + I K K
Sbjct: 185 SQSFKLM-----IASGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSK 239
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L +CE GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 240 TAELFGASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 287
>gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810]
Length = 329
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 231
>gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
Length = 329
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 231
>gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
Length = 329
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 231
>gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
Length = 338
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 82/234 (35%), Gaps = 11/234 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L E + +D + L QT H LL Y GGK++R L+ +
Sbjct: 3 ELSELQRALDEAIFRELPQTHPHPDVSAFYALLR--DYPARGGKRLRGTLLLLSTAAHGA 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L V AA+E + LIHDD+ R + +
Sbjct: 61 PWERGLNVAAALELFQNWVLIHDDIEDDSEDRRGRPALHRTAGVPVALNVGDALHIY-MW 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV------FMIQ 181
++ + + + L + GQ LD+ ++ M+
Sbjct: 120 RTLLRELRGDARAAPETLPRLLEAFEWMISRTAEGQHLDLTWVAEGRFEISEAAYLEMVT 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA+ A A + RLR GE+LG+ FQ+ DD+L+ D+
Sbjct: 180 LKTAYYTVVGPLELGALCAGAEPD--PRLRRAGEDLGVAFQIRDDVLNLMADVA 231
>gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S]
gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S]
gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
Length = 342
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 15/231 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +++ R++ +L L + +A+ A GGK+ R
Sbjct: 22 DQQLADAVRDGLARVEELLVSELSDGEDFLTE-------AALHLAKAGGKRFRPLFTVLT 74
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L V AA + MD +RRG P+ + ++ AI+AG+
Sbjct: 75 AQL-GPEGSDPAVVTAATVVELVHLATLYHDDVMDEAAMRRGAPSANARWGNSIAILAGD 133
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A ++S+ + I ++ L + + + D + + +
Sbjct: 134 YLFAHASRLVSTLGPE-AVRIIAETFAELVTGQMRETIGAREKQDPVEHY------LKVV 186
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + G + A ++ RL G+ +G FQ+ADD++D
Sbjct: 187 WEKTGSLIAASGRFGGTFSGADADQIARLERLGDAVGTAFQIADDIIDISS 237
>gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
Length = 326
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 13/232 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
L + I+T L D + +H + L + + + GK++R L+ A F
Sbjct: 4 LSLIKQPIETELGDFI-DLFNHALDHEDGLLRTVLNHIKQQAGKRMRPILILLMAKNFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A
Sbjct: 63 VSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVNADYDNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S +++ ++L +L+ LQ +IQ++ I E + I + KT A
Sbjct: 121 LLHVSYTHSEIIVRYLAELGRTLSDGEILQL------WNIQNKEITEEVYYKIIERKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L GA A+AS E E R FG++LGI+FQ+ DD+ D E ++ K
Sbjct: 175 LFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGK 226
>gi|223943155|gb|ACN25661.1| unknown [Zea mays]
Length = 413
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 21/245 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECA 62
+ + + + L L S + ++ + +A + GGK++R LV A
Sbjct: 89 TSVSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATA 148
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L ++ LTA A ++ +D+ +RRGK T+H Y A++AG+
Sbjct: 149 ELAGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDF 208
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + +++ + + SQ++ Q + D I +
Sbjct: 209 MFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSY 262
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----------- 231
KT +L+ + +S +I + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 263 YKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAA 322
Query: 232 EDLPK 236
DL K
Sbjct: 323 SDLAK 327
>gi|194703306|gb|ACF85737.1| unknown [Zea mays]
gi|194703680|gb|ACF85924.1| unknown [Zea mays]
gi|194704700|gb|ACF86434.1| unknown [Zea mays]
gi|223946673|gb|ACN27420.1| unknown [Zea mays]
Length = 424
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 21/245 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECA 62
+ + + + L L S + ++ + +A + GGK++R LV A
Sbjct: 100 TSVSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATA 159
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L ++ LTA A ++ +D+ +RRGK T+H Y A++AG+
Sbjct: 160 ELAGLSELTAEHRRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDF 219
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + +++ + + SQ++ Q + D I +
Sbjct: 220 MFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSY 273
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----------- 231
KT +L+ + +S +I + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 274 YKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAA 333
Query: 232 EDLPK 236
DL K
Sbjct: 334 SDLAK 338
>gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
AA4]
gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
AA4]
Length = 347
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 19/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + ++T+L D++ + +A+ GGK+ R
Sbjct: 29 DEPLLRAIASGLADVETMLRDVVKSDVPAVHD-------AALHLVEAGGKRFRPLFTLLS 81
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L AA+E +H +L HDD+ MD +RRG +V+ ++D AI+ G+
Sbjct: 82 AQFGPKQGEQVLVAAAAVELVHLATLYHDDV--MDEATMRRGAESVNSRWDNTVAILTGD 139
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A +++ T I ++ L + + G D + + +
Sbjct: 140 YLFAHASRLVADLGTD-AARIIAETFGELVSGQMRETVGPGPGDDPVEHY------LTVI 192
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ + G +M+ A++ + LR FG+ +G FQ++DD++D +L K
Sbjct: 193 AQKTGSLIATSGRFGGMMSGAAEEHIQALRRFGDIIGAAFQISDDVIDIASPSVELGK 250
>gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23]
gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23]
Length = 333
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + IDT++ D L + + + GGK++R L
Sbjct: 15 PQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHII-------CSGGKRLRPMLTMLAG 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ A IE IH +L+HDD+ +D +RR + T + + +++ G+
Sbjct: 68 HAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDF 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F++++ I ++ ++ LQ + + + DET + +
Sbjct: 126 LYSRSFQLMTELANLEVMQILAETTNRISEGEVLQLLH------VHNPDTDETTYLSVIE 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + GA+ +HA + R+ +G LG FQ+ DD+LD + L K
Sbjct: 180 RKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGK 236
>gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
Length = 282
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ +T L L S N L + + GGK+ R L+ +N + +
Sbjct: 1 MEQFETFLGSHLPSAPSFHPHYENS-LRQML---IGGGKRFRPALLLGVVRAYNPLLIQS 56
Query: 73 -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AIE +H YSLIHDDLP+MDN +RRG PT+H YDEV+AI+AG+ L TYAFE++
Sbjct: 57 AYHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTLHKTYDEVSAILAGDALNTYAFEVL 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + ++ L+ + ++ ++ QV M+ KTG L+
Sbjct: 117 SNAPFADRVIVKLIRSLAHNGGAEGMVLGQAIDCHFENFRLELDQVKMLHIHKTGKLIAA 176
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + GA + +E L FG +LG++FQ+ DD+LD ++
Sbjct: 177 ALQMGAFIVGRDDMAQE-LYDFGIDLGLLFQIQDDILDVTQNE 218
>gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32]
Length = 303
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHYHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 326
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 12/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN K + ++ + Q + + GGK++R L
Sbjct: 1 MNEAFAQLKATFLKEL-PAINAAIAQEIDALPKLVRPVAAHVME---AGGKRLRPMLTLL 56
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + +++E +H +L+HDD+ +DN +RRGK H + ++AG
Sbjct: 57 FARALSFRGDNLQTLASSLEFLHSATLMHDDI--LDNSELRRGKRAAHTLFGITPTVLAG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ LL A EI++ + S+ ++ ++ I+ I + I
Sbjct: 115 DVLLALANEIVARTNNPALTSCISKAIMQTATGEIMEI------AAIRKAHITRAEYIEI 168
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ ACE G I A S+ + + FG NLGI FQL DD LD
Sbjct: 169 ITGKTAYLIQSACEFGVIAAEGSERARAGAKTFGLNLGIAFQLVDDALDYTS 220
>gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti
VCD115]
Length = 324
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 15/224 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTA 72
+T L ++L ++ +D + GGK+ R + A +
Sbjct: 12 AAFETRLREVLRSRVEFIELIGDDLVA-------AGGKRTRPMITLLAAQALGVGPGSSQ 64
Query: 73 LRVGAAIECIHC--YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +S +D+ RRG+ ++ V ++++G+ +L +
Sbjct: 65 WPEVIDLGVCVELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTL 124
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + S Q I KT AL
Sbjct: 125 LAGMPSGTALTRAFGETASQICEG-----EVLQFQVAAYADYGLEHYLNIIHGKTAALTE 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + A++ +S+ ++E L FG G+ FQ+ DDLLD +
Sbjct: 180 LAACAPAMLLGSSEAQREALATFGREYGLAFQMQDDLLDLAGEE 223
>gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
20306]
gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
20306]
Length = 366
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 16/233 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L ++ ++ +L D + AS + A + GGK+ R +
Sbjct: 47 DDQLNDRVAAGVAAVERLLHDETNRGASFVSD-------KAQHLSEAGGKRFRPIMSLLS 99
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + A + + + ++ MD RRG + + +++ AI+AG+
Sbjct: 100 SEFGSEPGSEKVIKAATVVEMVHVATLY-HDDVMDEADRRRGVESANSRWNNSVAILAGD 158
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL +A ++S T + L + + G+ I +
Sbjct: 159 ALLAHASRLMSQLDTHTV-EQFAATFEELVTGQMRETVGAGEANPIDHYMK-------VI 210
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L+ A GA + A + E LR G +G++FQ+ DD++D +
Sbjct: 211 QEKTAVLIASAGYFGAYHSGAPKEHAEALRTIGGAIGMVFQIVDDIIDIFSES 263
>gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
43063]
gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
43063]
gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 350
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L +KL++ I+ +L QT + L +A GGK++R L + L
Sbjct: 24 LETKLRDALDDIEQMLVQ-ETQTQREKTSALVSHLRAA------GGKRMRPLLTLLVSQL 76
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
N + +V + L MD +RRG P H+Q++ A++AG+ +
Sbjct: 77 GAPNQPVSSQVKQGAVAVELTHLASLYHDDLMDEATMRRGVPAAHVQWNNTLAVMAGDLI 136
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A ++S + + + + +
Sbjct: 137 FSRASLLVSGLNPTIVAQHSRTFERLCQGQMR-------DIFGPDSHDDPIEFYIDVLRD 189
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ A GA ++ + FGE+LG+ FQ+ADD+LD +
Sbjct: 190 KTGALIGCAALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQATEA 241
>gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75]
Length = 303
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L SL
Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESPIIVELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + ++ + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
Length = 319
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 16/226 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S L E + + L LL +Q +D + GGK+IR L +
Sbjct: 8 SALPEPGEAFERRLRALLRSDVEFIQLIEDDLIA-------AGGKRIRPRLALLASRALG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A+E +H +L+HDDL +D+ RRG+ +Y ++++G+ LL+
Sbjct: 61 GVPHEME-LALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLSGDYLLSR 117
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+++ ++ ++ L LQ + E Q + I + KT
Sbjct: 118 VLFLLAETGRIELVHLFAEAARQLAEGEVLQF------QAAAYQEYSEAQYYRIIESKTA 171
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
ALM A E A++ A + + L +G G+ FQ+ DD LD
Sbjct: 172 ALMRAATEGAALLGRAPETLRMALVTYGREYGMAFQMRDDYLDLMG 217
>gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
clavuligerus ATCC 27064]
gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
clavuligerus ATCC 27064]
Length = 395
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 70/240 (29%), Gaps = 15/240 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
L +++ ++++ L A+ H ++ +R L GGK++R L
Sbjct: 49 DLTVVRDQVEQVVEEFLAAKAAAASGAGHPPEVVRILRDFLASGGKRLRPLLCVVGWHAA 108
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A + A + + +D+ +RRG+P VH L
Sbjct: 109 GGDEDPAAVLPVAASLELYQTFVLIHDDIIDDSALRRGRPAVHRALAARHVGHDSAARLG 168
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---------- 175
+++ + T + ML
Sbjct: 169 AGEALLAGNLALIWCQELLHTAELDTPRRAAVHRVNDTMLAEVMFGQYRDLLGTERLDDD 228
Query: 176 ---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +I+ + + G + FG LG FQL DDLLD
Sbjct: 229 IEAALGIIRYKTAAGTIQRPLQLGVAAGGGDEETHRFCTEFGVPLGEAFQLRDDLLDVFG 288
>gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 357
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 75/255 (29%), Gaps = 28/255 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVT 59
+ +P++ + L + L + + + A R A GGK++R
Sbjct: 5 DADIPTE-------VQRALTEFLDLQQQRLAEIGPELAEQVQAARDATSGGKRLRPSFCY 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR----------------- 102
+ + AA + S + D + R
Sbjct: 58 WGFRAAGGDPERPILTAAASLEMLHVSALVHDDVMDSSDVRRGAPAAHKRFEALQRARTE 117
Query: 103 --GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
G + + AI+ G+ L +A E++ + R+ G
Sbjct: 118 ASGTGGDPVGFGIGAAILLGDLCLIWADEMMHTSGFDAAALARASKFFDAVRVEVTAGQY 177
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ E + + +++ + GA + Q + L +G LG
Sbjct: 178 LDLVAQASGEADMDRALRVLRYKSATYTVERPLHIGAALGGGDQYLIDALSAYGLPLGEA 237
Query: 221 FQLADDLLDCEEDLP 235
FQL DDLL D
Sbjct: 238 FQLRDDLLGVFGDPG 252
>gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
Length = 280
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 5/205 (2%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ RL +A++Y L GKK+R+ LV + A AIE +H YSL+HDDL
Sbjct: 14 DDPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATAIEWLHTYSLVHDDL 73
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
P+MD+ +RRGKPTVH YDE TAI+ G+GL AF +IS + R +L+ + +
Sbjct: 74 PAMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDERLASG-TRLKLITLIAN 132
Query: 153 NIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+G GM+GGQ + Q + Q+ +I + KTGAL A SGA+ A+A++ + +RL
Sbjct: 133 AVGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGAVCANATEQDIQRL 192
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
F +G+ FQ+ADD+LD E+
Sbjct: 193 DQFASTIGLAFQVADDILDVTENSA 217
>gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 384
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 23/254 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTEC 61
L + ++ K +D L L + +A L GGK++R
Sbjct: 29 LAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFAATARDSVLAGGKRVRPTFAYWG 88
Query: 62 AS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG----------------K 104
+ + A ++ MD RRG
Sbjct: 89 WRGVVGGEEPLCSVLPALSALELLHTFALVHDDVMDASDTRRGLPTAHRAAAARHRAAGH 148
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
+Y E A++ G+ + +A +++ + + + + G +
Sbjct: 149 TGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAGQFLDVL 208
Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNE--KERLRCFGENLGIIF 221
+ + + + KT + GA +A A ++ +G +G F
Sbjct: 209 GENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGLAVGEAF 268
Query: 222 QLADDLLDCEEDLP 235
QL DDLL D
Sbjct: 269 QLRDDLLGVYGDPE 282
>gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
CB1190]
gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
CB1190]
Length = 331
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + KR++ +L + Q H + + L+ A GGK+ R
Sbjct: 13 DPVLAAVTTDGLKRVEDLLHREV-QADYHFVAETSLHLIDA------GGKRFRPLFTLLS 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + N + AA + MD+ +RRG + + ++D AI+ G+
Sbjct: 66 AQV-GPNPDNDDVITAAAVVELVHLATLYHDDVMDSATMRRGAESANSRWDNTVAILTGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A +++ I +T + + + +
Sbjct: 125 FLFAHASRLVADLGPDAVRIIAETFAELVTGQMR-------ETRGPAEGDDPVEHYLRVV 177
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ + G + + + + E LR FG +G FQ++DD++D D K
Sbjct: 178 AEKTGSLIATSGRYGGMFSGCTPEQTESLRRFGATIGTAFQISDDVIDIASPSDDSGK 235
>gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
49030]
gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
49030]
Length = 345
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ + + L + ++T+LD S + + L+ A GGK++R LV
Sbjct: 22 LSEEMTNMLVGELQHVETVLDAA-ASQTSAFADETSHHLMRA------GGKRVRPMLVLL 74
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ L AA+E +H SL HDD+ MD RRG + H ++ AI+ G
Sbjct: 75 CSQLGGGVSPRVHTAAAAVELVHLASLYHDDV--MDEAPKRRGALSAHEKWGNNVAILTG 132
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A + +S ++++ L + + + D + + +
Sbjct: 133 DLLFARASQ-LSLEVGAEAMRVQAETFERLVLGQLHEFVGTTESDDPIEHY------LSV 185
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KTG+L+ +C+ G I + ++ +GE +G+ FQLADD++D +D K
Sbjct: 186 LADKTGSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVDGKDSGK 244
>gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
21211]
gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
21211]
Length = 316
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 80/235 (34%), Gaps = 19/235 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MNG L + + L ++L ++ +D + GGK+ R L
Sbjct: 1 MNGA----LSFPTDAFEARLREVLRSQVEFIELIGDDLV-------TAGGKRTRPALTYL 49
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++ A + + + +D+ RRG PT ++ V ++++G
Sbjct: 50 AFRALGLDAHPQEHDVAVAVELLHSASLL-HDDLIDDADTRRGAPTAFRRFGNVVSVMSG 108
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L+ +++S L Q +
Sbjct: 109 DYMLSKLLVLLASTTPGLVRAFGETAAHVCEGE-------VLQFQVAAYGEYSHEHYLNV 161
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL+ A + A++ AS + L FG G+ FQ+ DDLLD
Sbjct: 162 IYGKTAALVELAASAPALLVGASDAHQRALADFGREYGMAFQMQDDLLDLAGTEA 216
>gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 374
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + ++ ++ + + + ++ L +A + GGK++R LV A +
Sbjct: 52 DITQITAPVNADMEQMRMNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAI 111
Query: 68 NHLTALRVGAAIECI----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ +D+ RRGK T+H Y AI+AG+ L
Sbjct: 112 KMNMSDITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRGKETIHTLYGARVAILAGDFL 171
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + SQ++ Q DE+++++
Sbjct: 172 FAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALFNCDITLDEYMEKSHN------ 225
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C+S ++ + ++ K + +G++LG+ FQ+ DD+LD +
Sbjct: 226 KTASLIAASCKSASVFSECEESVKIDMYEYGKHLGLAFQVVDDILDFTQSEE 277
>gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
Length = 324
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+++ I ++ + + S M++ L + Y + GK++R V A
Sbjct: 4 SIKDIQAPIQDVMANFEGKFRSFMKSDVF-LLDKIMNYIVKRKGKQMRPMFVFLSAGTGG 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A R A IE +H +L+HDD+ +D+ RRG +++ + A++ G+ LL+
Sbjct: 63 EINEMAYRGAALIELLHTATLVHDDV--VDDSNYRRGFFSINALWKNKIAVLVGDYLLSR 120
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + + I S + ++ LQ ++ ++ + D I + KT
Sbjct: 121 GLLLSIDNEDFEQLKIVSNAVREMSEGELLQIAKARRLDITEEVYYD------IIRQKTA 174
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
+L+ C GA A ++ + R FGE +G+ FQ+ DDL D ++ K
Sbjct: 175 SLIASCCAVGASAAGLNKEQISMFREFGEKVGMAFQIKDDLFDYGTAEIGK 225
>gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
Length = 322
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L + + ++ KR++ L ++ L S GGK++R L+
Sbjct: 1 MQAAL-NIIGDDLKRVEQQFRTDLESDVPLIRKVGEYVLSS-------GGKRVRPALLLL 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + A+ + + IE IH +L+HDD+ +D+ +RRG + + + +++ G
Sbjct: 53 AARLCDYQGDKAVPLASVIEFIHTATLLHDDV--VDSATLRRGLASANTLWGNEASVLVG 110
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + +F ++ + + + S + +Q + G++ + + +
Sbjct: 111 DFLFSKSFSLMVAVGSLDILKVLSDATTVIAEGEVMQLLCTGELELTE------ERYIDV 164
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT LM ACE+GAI+ A+ ++ L FG NLGI FQL DD LD
Sbjct: 165 VRSKTAILMSAACEAGAILGGAAPERRQALSDFGMNLGIAFQLMDDTLDYIATEE 219
>gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Methylophilales bacterium HTCC2181]
gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Methylophilales bacterium HTCC2181]
Length = 296
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 133/236 (56%), Gaps = 14/236 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+ + K+I+ L + + L + YA+L GGK++RS L+ ++ +
Sbjct: 9 WISHHQKKINLELSHFFKEIDQSL-------LKNVCEYAVLNGGKRLRSLLIYAISNYSD 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A+E IH YSL+HDDLPSMD+ +RRGKP+ HI+YDE AI+ G+ L +
Sbjct: 62 GYDTHFNCLALAVEMIHAYSLVHDDLPSMDDDELRRGKPSCHIKYDEAQAILGGDALQSL 121
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMK 184
AFE++SS K ++D ++ +++ L+ +IGL GM GQ +DI + + +Q +K
Sbjct: 122 AFELLSSDKFNVQDKVKIKVLNMLSQSIGLHGMALGQSIDIDSANKELNLKSLDHLQALK 181
Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
TGAL+ +C +++ +Q ++ + G+ +G I+Q+ DD+LD E D L K
Sbjct: 182 TGALIEASCVMSYVISDKYNQKHEKDIASIGKLIGSIYQITDDILDFESDTNTLGK 237
>gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
Length = 278
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 6/212 (2%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+ + ++++T +L +A+ YALLGG K+IR L V+ + A+E
Sbjct: 4 IENRLKAYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESKGVDPTPYIEAFLAVEM 63
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP+MD+ +RRGKPTVHI +DE AI+AG+ LLT +F + + L
Sbjct: 64 IHTYSLIHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFR-LVTQNKYLSTL 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ +++ ++ G GM+ GQ ++ +D+ + + ++ ++KT L+ + ++
Sbjct: 123 QKVEIIDIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMIAGVI 182
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
S ++ + G +G+IFQ+ DD+L+
Sbjct: 183 --LSDHDIKSYEDLGYYIGLIFQIQDDILEYT 212
>gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 336
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 8/233 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++L E + +D L D+ + A SA L GK++R V +
Sbjct: 8 DALAARLAELRRLLDGDLGDIEREIAKVGLDGETPAHRSARHLLGLNGKRLRPICVALAS 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A A+E +H +L+HDD+ + + RRG + Y +I G+
Sbjct: 68 HIGSGFNDAARTFAVAVELVHNATLLHDDVVDLGDR--RRGADAARVIYGNAASIFGGDY 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A I + ++ + LQ G++ ++ F I
Sbjct: 126 LLLDALSKIQAVGMTDVLERVLLVIKEMVVAEALQLASRGRVRTST------SEYFQIVD 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L +A +GA ++ + L FG +LG+ FQL DD+LD D
Sbjct: 180 GKTASLFRWAMFAGARAGGVNEPLCKALESFGTSLGVAFQLVDDVLDFAGDPE 232
>gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
Length = 326
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I+ L D + + + + + L + + GK++R L+ A F
Sbjct: 4 LSLIKQPIEAELVDFIDLFNNALDHE-DGLLQMVLNHIKQRAGKRMRPILILLIAKNFGK 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+ A
Sbjct: 63 VSSITQHAAVGLELLHTASLVHDDV--VDEAAERRGQASVNADYDNKVAVLVGDYVLSTA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S +++ ++L +L+ LQ ++ + I + KT A
Sbjct: 121 LLHVSYTHSEMIVRRLAELGRTLSDGEILQLSNIQNKEVTEEVYYK------IIERKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L GA A A++ + E R FG+NLGI+FQ+ DD+ D D
Sbjct: 175 LFETCAAIGAESAGATEEQVEAARLFGKNLGIVFQIRDDIFDYY-DSE 221
>gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
Length = 326
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 13/238 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
MN L ++E I + + M+++ L + Y + GK++R V
Sbjct: 1 MNMTL--SIKEIQAPIADEMKAFEQKFRQFMKSEVM-LLDQIMNYIVRRKGKQLRPMFVF 57
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + R GA IE +H +L+HDD+ +D+ RRG +V+ + A++
Sbjct: 58 LSAGVCGNISESTYRGGAMIELLHTATLVHDDV--VDDSNYRRGFFSVNALWKNKIAVLV 115
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + + I S + L+ LQ ++ ++ + +
Sbjct: 116 GDYLLSRGLLLSVDHEEFKILKIVSTAVRELSEGELLQIEKARRLDINEEVYYE------ 169
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT +L+ C GA A++ +++ FGE +G+ FQ+ DDL D ED K
Sbjct: 170 IIRQKTASLIASCCAVGASSVGAAKEVVDKMHAFGEKVGMAFQIKDDLFDYGEDEIGK 227
>gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
Length = 293
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 16 IDTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
++ ++D++ + + + ++ + +L ++ Y+L GGK+IR L+ N + +
Sbjct: 6 MNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGM 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
+ A+E IH YSLIHDDLP+MDN RRGK T H Y E TAI+AG+ LLT AFE+IS
Sbjct: 66 KSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISS 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + I+ LS+ + + + ID + MI K KTGAL+ FA
Sbjct: 126 DDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S A +A+A KE L + +LG++FQ+ DDLLDC D K
Sbjct: 186 VMSAADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229
>gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
Length = 320
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+Q+ + LD + +++ D + + +Y + GGK++R LV ++
Sbjct: 1 MQQVRAVVSAELDAVNAVIIEQLRSDV-DMVENVGQYIVDAGGKRLRPVLVLLSSAALGP 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +E IH +L+HDD+ +D +RRG+PT + + +++ G+ L T A
Sbjct: 60 ISDAQIHFAAVVEFIHTATLLHDDV--VDVSELRRGRPTANSAFGNAPSVLVGDFLYTRA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ + + + ++ LQ + G + Q + + KT A
Sbjct: 118 FQLMVALGNHDVLKMMADTTNTIAAGEVLQLIRAGDAATSE------EQYYDVIDRKTAA 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L CE A++A A E+LR G ++GI FQL DDLLD E D
Sbjct: 172 LFAAGCEGAALLAGADAARVEQLRVCGRSIGIAFQLIDDLLDYEGDPE 219
>gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180]
gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180]
Length = 303
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS+ I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
Length = 329
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 78/228 (34%), Gaps = 13/228 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF-- 65
L + K + L + L + T + L +RYAL GK IR LV A++
Sbjct: 4 LDDIRKPVTAEL-EALDEFVDRQFTAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAP 62
Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A + + + + D + R I+ L
Sbjct: 63 VKGAAAGRRACLAAMLVEMIHVASLIHDDVIDEADMRRGKPSANARWQSHKAVILGDYIL 122
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ S + L ++ + Q + + I
Sbjct: 123 AKNMNIGLQSGQFDLVTHVCGSMAALCEGE-------VLQDECAANSTMTRQAYLDIIYK 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT +L+ + +GA+ A+++ +R FGE +G+ FQ+ DD+LD
Sbjct: 176 KTASLLGVSASAGALAVGATRDRVATMRRFGEAVGMAFQIQDDILDYT 223
>gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 324
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 17/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
++E ++ + +LL +L+A Y L GGK++R L L
Sbjct: 10 IREELEKAEECSRELLNSNVR--------LVLTAGGYILDSGGKRVRPGLTIISGKLVEA 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ V +E +H +L+HDD+ +D +RRG+ + + + A++ G+ + A
Sbjct: 62 PLERLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRLSANEVFGNDVAVLVGDYMFAKA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I++ + +Q + + LQ G + + + F I KT +
Sbjct: 120 IYILAVYGGDKVLKVAAQTVQEMAEGELLQLEKIGDINLTE------EEYFDIIYRKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ CE G I+ A + E++ L+ +G+ +G FQL DD D D
Sbjct: 174 LLSTCCEVGGIVGEAREEERKALKNYGKFIGYAFQLVDDAFDYISDEK 221
>gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
BVAF]
gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
BVAF]
Length = 324
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + +K I + ++ + ++++ + I+Y + GGKKIRS +V A
Sbjct: 3 INQINKLIQQDIINVNFEIHKRLKSKI-TLINKLIQYIINSGGKKIRSSMVLLIAKSLTY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + IE IH +L+HDD+ +D +RRGK T +I + +++ G+ + T A
Sbjct: 62 KKNQHVIIATLIEFIHAATLLHDDV--VDTSEMRRGKITANIMFGNAASVLVGDFIYTRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F++++ ++ ++ + + + +Q + D I I KT
Sbjct: 120 FQMMTELQSLRILSLMANAVNIIAEGEIMQLIHC------HDPTITINHYMKIIYNKTAR 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L A ++ AI+A+A +++ L +G+ +GI FQL DD+LD
Sbjct: 174 LFEVASQTSAILANADIKQEQALGNYGKYIGIAFQLIDDVLDY 216
>gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
Length = 287
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 9/190 (4%)
Query: 45 YALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
Y + GG K++R L A A IE IH +L+HDD+ +D +RRG
Sbjct: 2 YIVSGGGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRG 59
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
K T + + +++ G+ + T +F++++ + + S + + Q M
Sbjct: 60 KATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSNAVNVIAEGEVQQLMNCND 119
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ + KT L A + GAI+ A ++ + ++ +G+ LG FQL
Sbjct: 120 PDTTE------ESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQL 173
Query: 224 ADDLLDCEED 233
DD++D D
Sbjct: 174 IDDVMDYTSD 183
>gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM
265]
gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265]
Length = 324
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+ + + + L + ++ Q N + RY L GK+IR +V AS+
Sbjct: 3 INDVTAPVAEELVLFRQKYRELLRNQ-NSLVDKVTRYVLRQQGKQIRPVMVLLSASVAGG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ R +E +H +LIHDD+ +D +RRG +++ + +++ G+ LL+
Sbjct: 62 IRESSYRGAIMVELLHSATLIHDDV--VDGAEMRRGIASINAIWKNKISVLIGDYLLSKG 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
K +I S + ++ LQ + I E + KT +
Sbjct: 120 LLYSLESKDYGFLHIVSDAVRRMSEGEILQI------QKTRSLDISEEDYIRVISDKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ +C GA A + + ++ +GE+LG+ FQ+ DD LD D K
Sbjct: 174 LIASSCAMGAESATEDEVKIAAMKKYGESLGLAFQIRDDTLDYTGDSRK 222
>gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
Length = 325
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVASDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A ++++ + AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACGLDNMQNAQRLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
Length = 325
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVATDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A ++++ + AAI + ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACGLDNMQHAQRLAAIIEM-LHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
Length = 324
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 16/234 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ +KL+ + RI+ L+ + + ++ + LL A GGK++R V
Sbjct: 5 DIFAKLKGDMSRIEQELERSI-SFGDELLSETSLHLLKA------GGKRLRPVFVLLAGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ +V +E IH SL+HDD+ +D+ RRG+ TV ++D A+ G+ +
Sbjct: 58 FGQYDLDKLTKVAVPLELIHMSSLVHDDV--IDDASTRRGQLTVKSKWDNRIAMYTGDYI 115
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A I++ + S+ ++ ++ Q + +
Sbjct: 116 FGRALTIVTELDDPFIHQMLSKSLVQMSIGEMEQIRYFFNTEQTI------RDYLLRIRR 169
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KT L+ +C+ GA A A + RL +G N+G+ FQ+ DD+LD K+
Sbjct: 170 KTALLIAISCQLGAAAAGADRATLNRLYRYGYNVGMTFQIRDDMLDLFG-TEKQ 222
>gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
Length = 323
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 82/219 (37%), Gaps = 9/219 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GGK IR +V + +
Sbjct: 11 VEDDLK-LLRNNLKSLVGTRHPILSAAAEHLFDAGGKHIRPAIVLLVSKATMLEGDITPH 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RR PTV+ +D A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDIVDEAVLRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ S+++ QG+ KT +L+ +
Sbjct: 130 LDNLQVVKLLSEVIRDFAEGEISQGINRFDTSLTL------DSYLDKSYYKTASLIANSA 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+S I++++S + + +G LG+ FQ+ DD+LD
Sbjct: 184 KSATILSNSSLDIINSIYTYGRCLGLAFQIVDDILDFTS 222
>gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group]
Length = 403
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 23/252 (9%)
Query: 2 NGGLPSKLQ--ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+P ++ + + L L S + ++ + +A + GGK++R LV
Sbjct: 72 TTMIPERISVSSLLEVVSDDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVF 131
Query: 60 ----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A L + LT A ++ +D+ +RRGK T+H Y
Sbjct: 132 LVSRATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRV 191
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++AG+ + + +++ + + SQ++ Q + D +
Sbjct: 192 AVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDVTLD 245
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---- 231
+ KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 246 DYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAE 305
Query: 232 -------EDLPK 236
DL K
Sbjct: 306 QLGKPAGSDLAK 317
>gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 384
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 23/254 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTEC 61
L + ++ K +D L L + +A L GGK++R
Sbjct: 29 LAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFATTARDCVLAGGKRVRPTFAYWG 88
Query: 62 AS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG----------------K 104
+ + A ++ MD RRG
Sbjct: 89 WRGVVGGEEPLCSVLPALSALELLHTFALVHDDVMDASDTRRGLPTAHRAAAARHRAAGH 148
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
+Y E A++ G+ + +A +++ + + + + G +
Sbjct: 149 TGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAGQFLDVL 208
Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNE--KERLRCFGENLGIIF 221
+ + + + KT + GA +A A ++ +G +G F
Sbjct: 209 GENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGLAVGEAF 268
Query: 222 QLADDLLDCEEDLP 235
QL DDLL D
Sbjct: 269 QLRDDLLGVYGDPE 282
>gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus
PHEA-2]
Length = 325
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVASDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A ++++ + AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACGLDNMANAQRLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
Length = 371
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ L++ +++ ++ L ++ LL A GGK+IR L A
Sbjct: 50 EIQQDLKDEVTKLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAK 102
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 103 MFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFL 160
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +F+++ + +I++ +L+ I +G + + + I + I K
Sbjct: 161 FSQSFKLMVA-----SGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKS 215
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 216 KTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 264
>gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
Length = 333
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + IDT++ D L + + + GGK++R L
Sbjct: 15 PQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHII-------CSGGKRLRPMLTMLAG 67
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ A IE IH +L+HDD+ +D +RR T + + +++ G+
Sbjct: 68 HAIGHTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSSSTANALWGNAPSVLVGDF 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F++++ I ++ ++ LQ + + + DET + +
Sbjct: 126 LYSRSFQLMTELANLEVMQILAETTNRISEGEVLQLLH------VHNPDTDETTYLSVIE 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + GA+ +HA + R+ +G LG FQ+ DD+LD + L K
Sbjct: 180 RKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGK 236
>gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
Length = 326
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + +++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEENIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-42]
gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
95/8201]
gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST26]
gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
6E1]
gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
6E1]
gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
BDRD-ST26]
gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
95/8201]
gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
Rock3-42]
gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 305
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
Length = 366
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 92/254 (36%), Gaps = 27/254 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTEC--- 61
+ E K + L D L + + Q + +AI R+ L GGK+IR V
Sbjct: 12 IAEVPKHVRAELADFLKEREPQI-AQIGRPVTNAIEHLERFILGGGKRIRPLYVWAGFVA 70
Query: 62 --ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS--------------MDNGYIRRGKP 105
L + + LR +++E I +LIHDD+ ++ + + G
Sbjct: 71 ADGLLGDEDPQAVLRAASSLEFIQSCALIHDDIVDASDTRRGNPTVHRAVEAEHRKLGWT 130
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ AI+ G+ L +A +++ R++ + G L L
Sbjct: 131 GDPEAFGRSAAILIGDMSLVWAEDMLLDSGLSQAALQRTREPWRAMRTEVIGGQLLDVSL 190
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ E + + + GA +A A Q + R +G ++GI FQL D
Sbjct: 191 EAAAIESVELSDSVNRFKTAAYTIERPLHLGAAIAGAPQKLIDAFRGYGRDIGIAFQLRD 250
Query: 226 DLLDCEED---LPK 236
D L D K
Sbjct: 251 DQLGVFGDPKVTGK 264
>gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium
genitalium ATCC 33030]
gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium
genitalium ATCC 33030]
Length = 386
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 9/225 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
QE ++R+ LD + + + H+ A GGK+ R + + +
Sbjct: 68 QELAERVAAGLDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQ 127
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ GA I + + ++ MD RRG + + ++ AI++G+ LL A
Sbjct: 128 AENVVKGATIVEMVHLATLY-HDDVMDEAAKRRGVDSANARWTNTVAILSGDFLLAEASR 186
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+S T + L + + G+ ++ + + KTG L+
Sbjct: 187 IMSEIDTATV-AHFADTFSDLVTGQMRETVGPGEGDPVEHY-------LNVIREKTGVLI 238
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A GA + A + L+ GE +G+IFQ+ DD++D D
Sbjct: 239 ASAAFLGATHSGAKDEDVRTLKELGEAVGMIFQIVDDVIDIFSDS 283
>gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
Length = 324
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 11/234 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+P+ + I + + M+T H L ++Y + GK+IR V A
Sbjct: 1 MPTTIDSIQAPIVEEMKSFEKKFRKSMKT-HVMLLDQIMKYIIHRKGKQIRPMFVFLTAG 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ R A IE +H +L+HDD+ +D RRG +V+ + A++ G+ L
Sbjct: 60 ALGGIKESTYRGAALIELLHTATLVHDDV--VDEANYRRGFFSVNALWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L + + I S + ++ LQ ++ ++ + + + +
Sbjct: 118 LAKGLLLSVENEDFNLLKIVSTAVREMSEGELLQIEKARKLDITEEVYYE------VIRQ 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
KT L+ C GA A + E E+ R GE +G+ FQ+ DDL D D K
Sbjct: 172 KTATLIAACCAVGAASADRTPEEVEKARLLGEKIGMAFQIKDDLFDFGTDEIGK 225
>gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 322
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 16/237 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ + +++++ + L + L++A GGK++R ++
Sbjct: 1 MNLEEVNRLVRADMAAVNSVIQEQLRSGVPTIPAMG-TYLINA------GGKRLRPIVLL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A +E IH +L+HDD+ +D +RR T + ++ A++
Sbjct: 54 LAARMGGERGPRPISLAAVVEFIHTATLLHDDV--VDGSELRRSNATANQRWGNAAAVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L +FE++ ++ + Q F
Sbjct: 112 GDFLYARSFEMMVQDGDMRILATMAEATSVIAQGEVAQLENANDPDLSP------EAYFA 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ + KT L A GA++ ++ L +G LGI FQL DD LD K
Sbjct: 166 VIEAKTAKLFEAAARIGALVNELDAAAEKALAQYGSLLGIAFQLMDDALDYSTSAEK 222
>gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
Length = 323
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADSDMQDVNKLIYAQLESDVALINQLGFYIING-------GGKRMRPLLSI 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + L++ A +E IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAIDYQGVAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRDTANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELGSMKVLKMLADATNVLAEGEVLQLMNCNDPDTSE------ESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L A ++A + + L +G+ LG FQL DDLLD +L K
Sbjct: 166 VIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLLDYTANTEELGK 225
>gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 304
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
++ GL L +RI+ L+DLL D + A+R L GK++R L+
Sbjct: 12 LDSGLTEHLASVRERIEKRLNDLLPA-----GGNERDLVAIAMREGTLAPGKRVRPMLLM 66
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + AL +G A+E IH SL+ DD+P MD+ +RRG PTVH+++ + AI+A
Sbjct: 67 LAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHLKFGQDVAILA 126
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
LL+ AF +++ +++ +R+QL+ L + +G+QG++ GQ D+ D D Q+
Sbjct: 127 AVALLSRAFGVVA-GISEVPPAVRTQLVGVLANAVGMQGLVRGQFQDLHDGLHSRDAEQI 185
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++KTG L + ++++ A + + L+ F LG FQL DDL D D K
Sbjct: 186 ATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDDLQDKSADNAK 244
>gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
Length = 322
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ ++ R + I+ + L ++ + + S GGK++R LV A
Sbjct: 4 NDIYQVVETEFARTNEIILEQLSSNVPMVEKIGHHIIES-------GGKRMRPLLVLLAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + + IE +H +L+HDD+ +D +RRGK T + + +++ G+
Sbjct: 57 KALESNEQNHPLLASIIEFLHTATLLHDDV--VDTSDMRRGKATANAAFGNAPSVLVGDF 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFE++ + I S + +Q M + + + +
Sbjct: 115 LYSRAFEMMVQLGSMEVMAILSNATCVIAEGEVMQLMNVKNPNVGE------DKYMDVIQ 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L + SGA +A+AS + E LR FG +LG+ FQL DD+LD +L K
Sbjct: 169 GKTAMLFEASSHSGAKLANASPEQAEALRLFGHHLGMAFQLVDDVLDYIGNADELGK 225
>gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 325
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L + +++ RI+ + + ++ +YA+ GGK++R L A
Sbjct: 3 TLRTFIEQEQPRIN--------AALAEAAAELPVSIMPIAQYAMGNGGKRLRPLLTVLVA 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + AA+E H +L+HDD+ MDN +RRG H + I+AG+
Sbjct: 55 RLLGYADNDIYPLAAAMEMFHVATLLHDDV--MDNAEMRRGSTATHKVFGVTETILAGDA 112
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL +I++ S + + L+ G+ + I
Sbjct: 113 LLAKGNQIVAGFGDPRLTAATSDAIAQTANGEILEIANQGKNAPDLLIYNQ------IIA 166
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT ++ +C GA+ A+ + + +G NLG+ FQ+ DD LD
Sbjct: 167 GKTAWMIRTSCNIGAVRANGTPEQVAGATDYGFNLGMAFQIVDDALDF 214
>gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 338
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 11/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ L+ + + + ++ S ++ A GGK++R L A +
Sbjct: 14 SAALEPLLRLVHDEMGEVNNIILSQARSDVALIPELARHLINSGGKRLRPMLTIGAAKMC 73
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + A++E +H +L+HDD+ +D +RRGK + + + +++ G+ LL
Sbjct: 74 GYEGTGHIMLAASVEFMHTATLLHDDV--VDESDMRRGKKSARMLWGNQASVLVGDFLLG 131
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF ++ + + S+ + Q ++ E + + KT
Sbjct: 132 QAFRMMVDVGSLGALKVLSEASSVIAEGEVWQL------AASKNLATTEEEYLNVIISKT 185
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AL A E GAI+ + E+ LR +G N+G+ FQL DD LD + L K
Sbjct: 186 AALFAAAAEIGAILTNRGPEEQAALRLYGTNIGLAFQLIDDALDYSGEAASLGK 239
>gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
SDF]
gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
AYE]
gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900]
gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056]
gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058]
gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059]
gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013150]
gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013113]
gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6014059]
gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii
AYE]
gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Acinetobacter baumannii]
gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2]
gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013150]
gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6013113]
gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
6014059]
Length = 325
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVATDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A ++++ + AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACGLDNMQNAQRLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
Length = 288
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
RI++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPRINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A++S + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57]
Length = 303
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H ++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALGIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
Length = 301
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 112/226 (49%), Gaps = 8/226 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+ +Q+ + + L L+ + RL A+ YA+ GGK+IR L S
Sbjct: 12 KAVIQQLQQDVANHLTKLIEER------PTEARLKEAMLYAVQSGGKRIRPLLTLAVGSA 65
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ AL + A+E IH YSLIHDDLP MD+ +RRG+PTVH +DE TAI+AG+ LL
Sbjct: 66 GTSTNKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRGRPTVHKAFDEATAILAGDALL 125
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE+ ++ + + + + +LS + + + ++ I ++ I + K
Sbjct: 126 TLAFEVAANANLEARQLVEAVKILSSASGMSGMISGQMKDIASEEVTITLERMKEIHREK 185
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
TG L+ A G + KE + + G+ FQ+ +DL D
Sbjct: 186 TGELLLAAVRLGNLFVD-DAKMKEAFVSYATHFGLAFQIQNDLQDV 230
>gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 343
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 8/234 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+ + ++++ ++ L H+ ++ D L AI GK IR LV
Sbjct: 7 VKAQIQAEMRAAFPVVEGRLSRFYAMQEYHLGWRNED-LTPAI---ADPGKLIRPQLVLL 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + AL + A I+ +H +SLIHDD+ +RRG+ T+ + I AG
Sbjct: 63 ACTAAGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSA--MRRGRRTLWHIWGLAHGINAG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
+ + A I R +L + L+ G + + I
Sbjct: 121 DAMFVIAHLAIHRLADVGVPAERVLAILRRFDEVILRICEGQYLDLSFEGDLSITPDDYL 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT AL+ A E GA +A A + L FG LG+ FQ+ DD+L
Sbjct: 181 TMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQIEDDILGIWG 234
>gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 376
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 85 GGKAVRPALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 142
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T T + L +
Sbjct: 143 KVHGPAQAILVGDALFALANEILLELGTVEAGR---ATRRLTTASRALIDGQAQDISYEH 199
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ AC GA++ A + L +G +LG+ FQ DDLL
Sbjct: 200 RERVTVEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLL 259
Query: 229 DCEEDLP 235
D
Sbjct: 260 GIWGDPE 266
>gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str.
Madrid E]
gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii]
gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22]
Length = 327
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L A ++ L+ A GGK+IR L A +
Sbjct: 7 IQQNLKDEVTQLNDLIISCLKSDAELIEKVG-KYLVEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +DN +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYKGNNHIKLASAVEFIHAATLLHDDV--VDNSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + I++ +L+ I +G + + + I + I K K
Sbjct: 118 SQSFKLMVA-----SGCIKAMNVLAKASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L ACE GAI+A + ++ FG LG IFQ+ DDLLD
Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLDYLG 220
>gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8]
gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8]
Length = 303
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + ++ + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 337
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+L + + + S I + L GK R LV A++ V+ L+ A E
Sbjct: 18 ILQNLQETLLNDGDTEVQSIINHLLSRQGKLFRPVLVYLSANIHQVDKDRVLKTAMASEL 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH SL+HDD+ +DN RRGK TV+ + +A++ G+ L + AF I++ +
Sbjct: 78 IHLASLVHDDI--IDNSDYRRGKQTVNYYWGNKSAVLVGDYLFSKAFSILAMIDSPKIMA 135
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA- 200
+ + + + +Q + ++ + + + KT AL+ CESGAI++
Sbjct: 136 LFTDAISKMCQGELIQLNNAFKSGISREIYFK------VIEYKTAALLAACCESGAILSS 189
Query: 201 --HASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
S L+ +G +LG +Q+ DD++D K
Sbjct: 190 GNGKSCKSAAALKNYGLHLGRAYQIIDDVMDYTVPMGSSEK 230
>gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83]
Length = 303
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALGIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + + + L+ FG +G+ FQ+ DD++D +D K
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDKEESGK 242
>gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl
trans transferase /farnesyl diphosphate synthase/Geranyl
geranyl pyrophosphate synthetase [Helicobacter pylori
908]
gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate
synthase/Dimethylallyltransferase/Geranyltranstransferas
e/farnesyldiphosphate synthase/Geranylgeranyl
pyrophosphate synthetase [Helicobacter pylori 2018]
gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017]
Length = 303
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLKNHRLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + E + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238
>gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
Length = 347
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
++ RI+ L LL+ A+ D A+ Y GGK++R L A + N
Sbjct: 22 EKYGPRIEEALAKYLLRDAA-------DDFKDAVLYQISTGGKRLRPILTLAVAEAVSGN 74
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AL A +E IH YSLI+DD+ +D G +RR KPT + + AI+ G
Sbjct: 75 YERALPAAAIVELIHNYSLIYDDI--IDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIE 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-------LGGQMLDIQDEFIDETQVFMIQ 181
E + + ++ + + + + +
Sbjct: 133 EAVLDTPKPSEFAREVAKVIKAIDEGERLDILFELAGRDDPYFVKARWPSVKLDDYIRMV 192
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTGAL+ A + GA+ + + FG N GI FQ+ DD+LD D K
Sbjct: 193 GLKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFGDPKK 247
>gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24]
Length = 303
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + E + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238
>gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 9/223 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL----GGKKIRSFLVTECASLFNVNHLTALR 74
LD L + + L A Y GGKK+R +V + N +
Sbjct: 8 ELDKLSKSIREDLLGTDHPVLSKAASYFFKATSDGGKKVRPMMVLLLSRALNWQRSDLPQ 67
Query: 75 VGAAIECI--HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ I ++ +D RRG P+VH+ + AI+AG+ LL A ++
Sbjct: 68 AQRRLAEISEMIHTASLFHDDVIDGAETRRGAPSVHMVFGNKMAILAGDYLLARASICLA 127
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ S + H + + M + KTG+LM +
Sbjct: 128 RLRNVEVVETMS---TIIEHLVRGEVMQLRGSTSSERSGERLVYYLRKNFYKTGSLMANS 184
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
C+S A++ + FG+++G+ FQL DD+LD E L
Sbjct: 185 CKSAALLGEYPNELVDASYRFGKHVGMAFQLVDDVLDFEGSLS 227
>gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 338
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 25 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASLFDYRG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 ENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSSAACVIAEGEVLQL------SVAKNMETTEDDYLSVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 190 AAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 239
>gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
Length = 346
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 33 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASLFDYRG 85
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 86 DNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 143
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 144 MMVDVGSLDALDVLSSAACVIAEGEVLQL------SVAKNMETTEDDYLSVIRAKTAALF 197
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 198 AAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 247
>gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115]
Length = 318
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 15/224 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTA 72
+T L ++L ++ +D + GGK+ R + A +
Sbjct: 6 AAFETRLREVLRSRVEFIELIGDDLVA-------AGGKRTRPMITLLAAQALGVGPGSSQ 58
Query: 73 LRVGAAIECIHC--YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +S +D+ RRG+ ++ V ++++G+ +L +
Sbjct: 59 WPEVIDLGVCVELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTL 118
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + S Q I KT AL
Sbjct: 119 LAGMPSGTALTRAFGETASQICEG-----EVLQFQVAAYADYGLEHYLNIIHGKTAALTE 173
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + A++ +S+ ++E L FG G+ FQ+ DDLLD +
Sbjct: 174 LAACAPAMLLGSSEAQREALATFGREYGLAFQMQDDLLDLAGEE 217
>gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLTALRVG 76
+L Q + N L+SA GGK++R LV A + + LT
Sbjct: 110 QILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKDLTIKHRR 169
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A ++ +D +RRGK TVH Y A++AG+ + + +++ +
Sbjct: 170 LAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLEN 229
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ SQ++ Q +E++ ++ KT +L+ + +
Sbjct: 230 LEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKS------FYKTASLIAASTKGA 283
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
AI + N E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 284 AIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAK 334
>gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512]
Length = 338
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 25 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLAAASLFDYRG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 ENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSSAACVIAEGEVLQL------SVAKNMETTEDDYLSVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 190 AAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 239
>gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
Length = 332
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 18/237 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S + IDT++ D L + + + GGK++R L
Sbjct: 14 PQIQSFAASDMAAIDTLIHDRLTSDIVLINQIADHII-------CSGGKRLRPMLTMLAG 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ A IE IH +L+HDD+ +D +RR + T + + +++ G+
Sbjct: 67 HAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDF 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F++++ I ++ ++ LQ + + + DET + +
Sbjct: 125 LYSRSFQLMTELANLEVMQILAETTNRISEGEVLQLLH------VHNPDTDETTYLRVIE 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L A + GA+ +HA + R+ +G LG FQ+ DD+LD + L K
Sbjct: 179 RKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGK 235
>gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10]
gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1]
gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
Length = 272
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHL 70
++++ + ++L + A+ Y+ +GGK+IR LV V
Sbjct: 2 KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L V A+E H SLIHDDLP +DN RRGKP+ H Y E A++AG+GL
Sbjct: 55 KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLF-----F 109
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + N + S T L G + + I + V + KTGAL
Sbjct: 110 LAFSQISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKMEISQEMVERMYAFKTGALFA 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F + I+ + + +++ GE G+ FQ+ DDL D K
Sbjct: 170 FCFSAPFILK---EKDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212
>gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
IFM 10152]
Length = 369
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 18/244 (7%)
Query: 7 SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+++++++ R+ LDD + + H+ L I + GGK +RS L S
Sbjct: 27 TRMRDDTARV---LDDFVRARRREHLGAPETAVLGQVIGDFVAGGKYLRSALHLAGWSTV 83
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQY 111
A+R A+ E +HC++L+ DD+ + R+G ++
Sbjct: 84 APVGAAAIRAAASAELLHCFALMQDDVMDESARRRGRPAAHVRFAQWHARQGFSGSSDRF 143
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
E A +A + L +A +++ R+ + G + D +
Sbjct: 144 GESAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRSELAVGQFRDLVNDARRRP 203
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + + E GA +A A L +G +G FQ+ DDLL
Sbjct: 204 ALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRYGVAIGEAFQVRDDLLGVF 263
Query: 232 EDLP 235
D
Sbjct: 264 GDPG 267
>gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 316
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 18/223 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ ++ L D + + A R+ GGK+ R LV A + +
Sbjct: 5 LEAVEAELRDTVASADPF--------VTEAARHLADAGGKRFRPLLVALGAQFGDPSRAE 56
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ +E H +L HDD+ MD +RRG P+ + ++ AI+ G+ L A ++
Sbjct: 57 IVSAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILVGDYLFARAADVA 114
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + L L + + + T + KTG+L+
Sbjct: 115 AELGPEAVR-------LQARTFARLVHGQIAETVGPRAGDDPVTHYLRVIAEKTGSLIAT 167
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ G + + A+ L +GE +G+ FQL+DDLLD +
Sbjct: 168 SAHFGGLFSGATPEHVAALAGYGETIGVAFQLSDDLLDIASES 210
>gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58]
gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58]
Length = 293
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
I+ +++ L + + + + + YAL GGK+IR LV A
Sbjct: 7 FDTYRPAIEAAIEESLDEF-----GESEKTIRAPVEYALKTGGKRIRPLLVCMLAHGIG- 60
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
H + A+E H +LI DDLP MDN RRG+PTVH + E A++A L+ A
Sbjct: 61 KHCDVMDSALAVEFAHTSTLIADDLPCMDNDDERRGRPTVHKVFGEALALLASYALIPAA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLS---------LTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ +LK + + NIG G+LGGQ D+ V
Sbjct: 121 YSHFHKNAKKLKKQGYNPQAIDVAYDIILEVTNRNIGCAGVLGGQYDDMFFSNKGREHVQ 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KTGAL A SG + S N ++ F + G++FQ+ DD LD E+D
Sbjct: 181 SIMVKKTGALFEIASVSGWLFGGGSPNLLPQIIEFSRHFGLLFQIKDDFLDYEKD 235
>gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Geranyltranstransferase
gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli
dimethylallyltranstransferase, Swiss-Prot Accession
Number P22939 (Fujisaki et al., J. Biochem.
108:995-1000(1990) [Bradyrhizobium japonicum USDA 110]
Length = 332
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q+ +KR++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 36 WMQDGAKRVEEALARLLCAED-----DGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 91 TPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 150
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S I L+ + L + + ++ ++ + +MK+G
Sbjct: 151 AFLTLASLNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSG 210
Query: 187 ALMCFACESGAIMA-HASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ + GA+ A + L + G+ Q+ DD+LD D
Sbjct: 211 ALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 263
>gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D ++ L ++ Q + ++ A GGK++R ++ A F+
Sbjct: 1 MRAVDAVIRRRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLSARAFDYEGHRH 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++
Sbjct: 54 HELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + LQ + D + + + + KT L +
Sbjct: 112 EAGSMRIMEILSNATNVIAEGEVLQLLNM------HDPEVTVERYLQVIRYKTAKLFEAS 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A A +E +G +G FQL DD+LD
Sbjct: 166 AQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTASAE 208
>gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988]
Length = 326
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 14/230 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S L ++ + + ++ + H++ D + GGK +R A
Sbjct: 11 SALSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-G 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ V A + +D+ +RRG PT+H +Y A+ G+ L
Sbjct: 63 PDYDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCI 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F+I+S+ + +++ + + + QM + + KT
Sbjct: 123 CFKILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
L +C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 178 QLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 326
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 84/228 (36%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ K + ++ + H++ D + GGK +R A +
Sbjct: 13 LSDDLKEVLQTIEKNIQIRDKHVEKNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 FDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMDVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + AS+ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
Length = 308
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
K +D ++ L ++T + Y + GGK++R ++ A+
Sbjct: 1 MKAVDAVIRARLNSDVVLIRTIGD--------YIVGAGGKRMRPAMLLMMANALGYQGGN 52
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 53 HHLLAAVVEFIHTATLLHDDV--VDESDLRRGRSTANAVFGNAASVLVGDYLYSRSFEMM 110
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S + LQ + ++ D + + + + KT L
Sbjct: 111 VQSGSMPAMSVLSAATTVIAEGEVLQLL------NVHDPDVSLDRYLQVVRYKTAKLFEA 164
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GAI+ A+ ++ +G ++G FQL DD+LD
Sbjct: 165 ATQVGAIIGGATTEQEAAAAAYGRHIGTAFQLIDDVLDYSG 205
>gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
VS]
gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
VS]
Length = 324
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 8 KLQENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
KL I+ L + + S + Q + + Y L+GGK +R L A F
Sbjct: 3 KLSSIYAPINEGLKGVEDEFKLVSERRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCF 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + + E +H +L+HDD ++D RRG+ TV+ + AI+ G+ L
Sbjct: 63 GAGIKKVLSLATSSEMLHIATLVHDD--AIDKADTRRGRRTVNSVWGLEKAILLGDFLFA 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+A E + + +Q + Q + KT
Sbjct: 121 HAAETAADTGNMRIVTLFAQ------TLQIIASGELKQAYASFNPDQSYENYLERISGKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AL A + GAI+A AS ++E +R +G NLG+ FQ+ DD+LD D+ K
Sbjct: 175 AALFVMATKGGAILADASPADEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228
>gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 345
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 90/236 (38%), Gaps = 16/236 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + +R++ ++ + + N + S GGK++R L A
Sbjct: 19 NDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIAS-------GGKRLRPILTLATA 71
Query: 63 SLFNVNHLTALRVGAAIECI---HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L A R G ++ +D +RRG+ I++ +++
Sbjct: 72 QLCGYRAGEAGRDGDVKLAASVEFMHTATLLHDDVVDESDMRRGRVAARIKWGNQASVLV 131
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL AF+++ + +I S + +Q ++ E +
Sbjct: 132 GDFLLGQAFKMMVEVGSLRALDILSSAAAVIAEGEVMQL------GAAKNTETTEDEYLA 185
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KT L ACE G ++A ++E R +G NLG+ FQL DD LD
Sbjct: 186 VIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDALDYGGTSA 241
>gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
Length = 300
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLI 88
+ + ++ + Y+L GGK++R +V +F N L A+E IH YSLI
Sbjct: 22 LSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSLI 81
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP+MDN +RRG+PT H+Q+DE TAI+AG+ LLT AF +I+ + +LK R +L+
Sbjct: 82 HDDLPAMDNDDLRRGQPTNHVQFDEATAILAGDALLTDAFALIA-QEAKLKPRQRLKLIE 140
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
L+ + G GM+ GQ+ DI+ E + I ++KTG L +AC++GAI++ AS E
Sbjct: 141 LLSRSAGSTGMVAGQLFDIRAENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDKE 200
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + F + G+ +Q+ +DL D D
Sbjct: 201 LKLIDEFAQAFGLAYQIHNDLQDVLLDS 228
>gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
Length = 289
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLT 71
+I+ L + + +++L++AIRY+ GGK+IR L+ E F+V +
Sbjct: 5 DKINQALTRFYQE-----KQAVSEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLTDS 59
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AA+E IH SLIHDDLP+MDN RRG T H ++DE TAI+AG+ L AF +I
Sbjct: 60 HYDIAAALEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFALI 119
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + LS + + + + + ++ I KTG L+ +
Sbjct: 120 AGTNLSANIKVDLIESLSNSSGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGCLLAY 179
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ A +A + + G+ +G FQ+ DD+LD DL K
Sbjct: 180 PFWAAAKIAEVDEQILLEIYQAGQKVGHAFQVRDDILDVTADFADLGK 227
>gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 325
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L I L D + + + L A+ + GK++R L+ A F
Sbjct: 3 YLSLIQHPITQELSDFNQLFEESL-SHADGLLSQALSHIRQRTGKRMRPMLILLIAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A +E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+
Sbjct: 62 GVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYDNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S ++ + L +L++ LQ ++ + + K KT
Sbjct: 120 ALLQVSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEEVYYQ------VIKQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL GA A+ E E R FG+ LGIIFQ+ DD+ D E ++ K
Sbjct: 174 ALFESCAVIGAQAGKATPEEVEAARQFGQTLGIIFQIRDDIFDYFESKEIGK 225
>gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 325
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVASDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A ++++ + AAI ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACGLDNMANAQRLAAIIE-MLHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 421
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLTALRVG 76
+L Q + N L+SA GGK++R LV A + + LT
Sbjct: 111 QILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKDLTIKHRR 170
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A ++ +D +RRGK TVH Y A++AG+ + + +++ +
Sbjct: 171 LAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLEN 230
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ SQ++ Q +E++ ++ KT +L+ + +
Sbjct: 231 LEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKS------FYKTASLIAASTKGA 284
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
AI + N E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 285 AIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAK 335
>gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]
Length = 421
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLTALRVG 76
+L Q + N L+SA GGK++R LV A + + LT
Sbjct: 111 QILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLKDLTIKHRR 170
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A ++ +D +RRGK TVH Y A++AG+ + + +++ +
Sbjct: 171 LAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLEN 230
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ SQ++ Q +E++ ++ KT +L+ + +
Sbjct: 231 LEVIKLISQVIKDFASGEIKQASSLFDCELELEEYLLKS------FYKTASLIAASTKGA 284
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
AI + N E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 285 AIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAGSDLAK 335
>gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae NT127]
gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus
influenzae NT127]
Length = 329
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF++++ ++ +I + L Q M + ++ + KT
Sbjct: 125 AFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR------VIYSKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 179 RLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVLDYSANAQALGK 231
>gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334]
gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 283
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L ++ LD+ L N L +A+ Y++ GGK++R L+ ++++
Sbjct: 5 LAGWRTAVEQTLDEQLA-------AVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA+E +H YSLIHDDLP+MD+ +RRGKPT H Q+ E AI+AG+ LLT A
Sbjct: 58 VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
F I+S + + L G GM+GGQ +D ++E + + + KT
Sbjct: 118 FAILSREYP----EKGAACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ A G + + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 174 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227
>gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
Length = 336
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+++++ + + + A GGK++R L A+L
Sbjct: 26 MNSVNSVILERMQSEIPLIPRL-------AGHLISGGGKRLRPMLTLAGAALVGYEGTRH 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ AA+E IH +L+HDD+ +D +RRGK +I + ++ G+ L + AFE+++
Sbjct: 79 HKLAAAVEFIHTATLLHDDV--VDGSELRRGKAAANIVFGNPATVLVGDFLFSRAFELMT 136
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + Q + E + I KT AL A
Sbjct: 137 EDGSLRVLKILSHASAVIAEGEVSQL------TAQRQIETSEERYLHIIGAKTAALFAAA 190
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A++A S E+ L +G NLG+ FQL DD +D + D
Sbjct: 191 SQISAVVAECSDEEERALEDYGRNLGVAFQLVDDAIDYDSDAA 233
>gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
Length = 325
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L I+ L D + + + L + + GK++R L+ A F
Sbjct: 3 YLSLIKLPIEAELADFIDLFNKSLM-HSDGLLSQVLDHIRQRAGKRMRPILILLMARNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+
Sbjct: 62 KVSNVTQHSAVGLELLHTASLVHDDV--VDESVERRGQASVNATYNNKVAVLVGDFILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S ++ ++L L++ LQ +D + + K KT
Sbjct: 120 ALLHVSYSHSEEIVRYLAELGRILSNGEILQLNSISNEEISEDIYYQ------VIKQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA+ A+AS+ + E + FG+NLGIIFQ+ DD+ D
Sbjct: 174 ALFEACAGIGAMSANASELQIEEAKRFGQNLGIIFQIRDDIFDYY 218
>gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
Length = 336
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L S + ++ ++T + + + N + S GGK++R L A L
Sbjct: 18 LVSLVADDMAGVNTTILARTGSEVTMIPEVANHLISS-------GGKRLRPMLTLAMAQL 70
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL
Sbjct: 71 AGYVGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSARMLWGNEASVLVGDFLL 128
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF ++ + +I S ++ +Q ++ E + + + K
Sbjct: 129 GQAFRMMVEVGSLRALDILSSAAATIAEGEVMQL------AAAKNTATTEDEYLAVIRGK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L ACE G ++A + E+ R G NLGI FQL DD+LD K
Sbjct: 183 TAELFAAACEVGPVIAERPKAEQTACRAVGMNLGIAFQLVDDVLDYGGTAAK 234
>gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
Length = 335
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q+ +KR++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 39 WMQDGAKRVEEALARLLCAED-----DGETELMAAMRYATLHGGKRTRALLCLAAGALAD 93
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 94 TPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 153
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S I L+ + L + + ++ ++ + +MK+G
Sbjct: 154 AFLTLASLNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSG 213
Query: 187 ALMCFACESGAIMA-HASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ + GA+ A + L + G+ Q+ DD+LD D
Sbjct: 214 ALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 266
>gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4]
gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4]
Length = 303
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELVKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEGLFKWLQDFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 346
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR LV CA + + AL A+E +H +SL+HDD+ +D RR +PT
Sbjct: 62 GKAIRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDV--IDRDVTRRHRPTAWS 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + AI+AG+ + T A +++ + + ++ I Q +
Sbjct: 120 VFGDGAAILAGDAMSTLACAVLADSGHPAAMDGIKLVNRAIQELIDGQH---ADVSFETR 176
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E ID + + KTGAL+ AC GA S ++ ERLR FG +LG+ FQ DDLL
Sbjct: 177 EQIDPQECRAMAAAKTGALLGCACAIGARFGGGSPHQVERLRAFGTDLGLAFQHVDDLLG 236
Query: 230 CEED---LPK 236
D K
Sbjct: 237 IWGDPQATGK 246
>gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 346
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 18/250 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + S Q + I+ + ++ +L A RY L GGK++R ++
Sbjct: 1 MTDTVDS--QAVMEAIEWRRGQVNDAIPENLPVVEPKKLYEASRYLLDAGGKRLRPTILL 58
Query: 60 ECAS-----LFNVNHLTALRVGAAIECIHCYSLIHD--------DLPSMDNGYIRRGKPT 106
A L + ++ + MD+ +RRG P
Sbjct: 59 LVAESIADVLPRSEPYREFPAAEGPIDMMSAAVSIEIIQSFTLIHDDIMDDDDMRRGVPA 118
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
VH ++D TAI+AG+ L AFE + + ++R+ L+ T +G +
Sbjct: 119 VHREFDLSTAILAGDTLYAKAFENMLETGSTGDRSVRALSELATTCTQICEGQSMDIEFE 178
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + ++KT L A I+ + + L +G N+G FQ+ DD
Sbjct: 179 TDETVTT-EDYLEMVELKTAVLYAAAASIPPILMG-EDDYVDPLYQYGLNIGRGFQIQDD 236
Query: 227 LLDCEEDLPK 236
LLD K
Sbjct: 237 LLDLTTPSEK 246
>gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE]
gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Haemophilus influenzae PittEE]
Length = 323
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MNGGLPSKLQE-NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ KL + + ++++ + L S + Y + GG K+IR +
Sbjct: 1 MSIDEIQKLADPDMQKVNQNILAQLNSDVSLIGQLGF--------YIVQGGGKRIRPLIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A ++ +E IH SL+HDD+ +D +RRG+ T + ++ +++
Sbjct: 53 VLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ I + L Q M + ++
Sbjct: 111 VGDFIYTRAFQLVAQLESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMR----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L
Sbjct: 166 -VIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 345
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 21/250 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYAL------------LGGKK 52
+++ ++ +++D L D+ + + +AI+Y + GK
Sbjct: 2 NEIDKDIEQLDKYLQDVRNYIRQFLTDNGREPREFYNAIQYPVGLVDEQMVPGDSQSGKM 61
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+R L A+ AAIE +H ++L+HDD+ D+ RR +P++
Sbjct: 62 LRPRLCILSCMAAGGEVRKAIPAAAAIEILHNFTLVHDDIE--DHSPSRRHRPSLWKLIG 119
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
A+ AG+G+ + ++ S + L G M + +
Sbjct: 120 VPLALNAGDGMFVISHMVLQSMLELGVPAQTVLAAIDKFDQAALSVCEGQHMDLMFEARE 179
Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + KTGALM +C GA++A + E+ R FGENLG+ +Q+ DD+
Sbjct: 180 EVSLQEYLAMISRKTGALMGLSCYLGALVAGKDECVLEQYRHFGENLGLAYQIRDDIAGI 239
Query: 231 EEDL---PKK 237
E K+
Sbjct: 240 WESSESTGKR 249
>gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
Length = 303
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L SL
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori 26695
Length = 311
Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 16 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 75
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 76 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 135
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 136 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 195
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 196 SLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 240
>gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27]
gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27]
Length = 303
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLKNHHLHLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + ++ + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
Length = 303
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida 3523]
Length = 325
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIIDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EDYIKVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ + ++ +R +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99]
Length = 326
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|145596949|ref|YP_001161246.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145306286|gb|ABP56868.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 384
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 80/258 (31%), Gaps = 23/258 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFL 57
+ L + +E +D L D L + + +A L GGK++R
Sbjct: 25 VGARLAAYTEEVVAAVDDTLVDFLATEIDALAAIDSSAGGFATTARDSVLAGGKRLRPTF 84
Query: 58 VTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT---------- 106
+ + A ++ MD+ RRG+PT
Sbjct: 85 AYWGWRGVVGGAEPLPPVLPALAALELLHAFALTHDDVMDSSATRRGRPTAHVAVAAQHA 144
Query: 107 ------VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
++ E A++ G+ L +A +++ + + + G
Sbjct: 145 AAGRRGDSGKFGENVAVLVGDLCLVWADRLLAQAVLPPARLLEVRHCYDQMRVETVAGQY 204
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAH--ASQNEKERLRCFGENL 217
+ + + + + KT + + GA +A A +G+ +
Sbjct: 205 LDVLGESDPTNWSVERALQVARYKTASYTVRWPLLFGARLAGVVADSPLIAAYDRYGQAI 264
Query: 218 GIIFQLADDLLDCEEDLP 235
G FQL DDLL D
Sbjct: 265 GEAFQLCDDLLGVYGDPA 282
>gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
Length = 344
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 12/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
I +I+ D + N ++ + GGK++R + CA + N
Sbjct: 23 ADIQSIVADDFDIMDKQVFGSLNSKVKLVMNVSQHVINAGGKRMRPLITLLCARMLNDEP 82
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
AAI ++ +D RRGKPT + +D TA++ G+ L+ AF
Sbjct: 83 SKQAMHLAAITE-MLHTATLVHDDVIDESGQRRGKPTANATWDNATAVLVGDYLIARAFN 141
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ ++ + S + LQ + E I KT L
Sbjct: 142 LLVGFQSLPLLQVFSDGTCDIAEGEVLQLQHQ------HNPEATEQDYLNIIDGKTSRLF 195
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + AI+ + + L FG++ G FQ+ DD+LD D
Sbjct: 196 MMATQGAAILQGQT-QHLQALANFGQHFGNAFQIVDDVLDYSGDSA 240
>gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
Length = 296
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 8/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALR 74
++ L + + T H + GGK+ R L F
Sbjct: 16 EAFEEYLHKAKPRLDTFHPFFEKAFWEMLENGGKRFRPKLFLAVLCAFEEKIETIHACFP 75
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A+E +H YSLIHDDLP MDN RR PT+H YDE TA + G+GL TYAFE++++
Sbjct: 76 IALALEVLHTYSLIHDDLPCMDNADTRRYHPTLHKSYDETTATLVGDGLNTYAFELLATN 135
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ I L+ IG + + + ++ Q+ + +KT L+ + +
Sbjct: 136 SLPDRLKISLITTLAQCGGIGGMVLGQALDCHFEHQTLNLQQLETLHTLKTAKLIAASLK 195
Query: 195 SGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GA++ S + L FG LG+ FQ+ DD++D + + K
Sbjct: 196 MGALIVCDSLETDISHSLFTFGLKLGLFFQVRDDIIDRTQSPEESGK 242
>gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W]
gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II]
Length = 283
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L ++ LD+ L N L +A+ Y++ GGK++R L+ ++++
Sbjct: 5 LAGWRTAVEQTLDEQLA-------AVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA+E +H YSLIHDDLP+MD+ +RRGKPT H Q+ E AI+AG+ LLT A
Sbjct: 58 VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
F I+S + + L G GM+GGQ +D ++E + + + KT
Sbjct: 118 FAILSRQY----REKGAACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ A G + + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 174 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227
>gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14]
gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14]
Length = 325
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L I LDD + + + + L + + GK++R L+ A F
Sbjct: 3 YLSLIKSSISIDLDDFVALFNQSL-SHTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+L +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ LL+
Sbjct: 62 KVSDVSLNAAVGLELLHTASLVHDDV--VDESDERRGQASVNASYNNKVAVLVGDYLLST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S +++ S+L +L++ LQ +IQ+ I E + + MKT
Sbjct: 120 ALLYVSYTHSEVIVRYLSELGRTLSNGEILQL------SNIQNRTISEDAYYDVISMKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL GA A AS + R FG+ LG+IFQ+ DD+ D
Sbjct: 174 ALFEACAVIGAESAGASHEDTMAAREFGKKLGLIFQIRDDIFDYY 218
>gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
Length = 334
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 87/234 (37%), Gaps = 15/234 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ ++ L+ L + L GGK++R L A +
Sbjct: 9 KKYGAAVEKALERYLS--IDLAPDFREEVLYQV----KTGGKRLRPLLTLATAEAVSGRW 62
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT---- 125
A+ A +E IH YSLI+DD+ +D G +RRG PTV + + AI+ G
Sbjct: 63 EPAVPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILIGIWYREAIEE 120
Query: 126 ---YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ ++ K K L G + + + +
Sbjct: 121 AVLDTPKPLAFAKEVAKVIKAIDEGERLDILFEYAGREDPYFIKARKAEVTLEDYIHMVS 180
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTGAL+ A + GA+ E FG G+ FQ+ DD+LD D K
Sbjct: 181 LKTGALIAAAAKWGAMSVSDDGKLAEEAWNFGLKAGVAFQIIDDVLDIYGDPKK 234
>gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
Pylori Complexed With Magnesium And Isoprenyl
Diphosphate
Length = 310
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 23 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 82
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 83 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 142
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 143 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 202
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 203 SLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 247
>gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
Length = 280
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L ++ LD+ L N L +A+ Y++ GGK++R L+ ++++
Sbjct: 2 LAGWRTAVEQTLDEQLA-------AVANPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA+E +H YSLIHDDLP+MD+ +RRGKPT H Q+ E AI+AG+ LLT A
Sbjct: 55 VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
F I+S + + L G GM+GGQ +D ++E + + + KT
Sbjct: 115 FAILSRQY----REKGAACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 170
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GAL+ A G + + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 171 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 224
>gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219]
gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219]
Length = 276
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+ + L A+ YAL+ GK+IR ++ F + A+E
Sbjct: 2 FESYLQQSLSIYEDGVLKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEY 61
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH YSLIHDDLP+MD+ +RRGKPTVH+ + E AI+AG+ LLT +F ++ K N
Sbjct: 62 IHTYSLIHDDLPAMDDDVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQN 121
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+++ +LS + M ++F + + + + KTG L+ + E GAI A+
Sbjct: 122 LKALEVLSSHAGANGMVLGQ-VMDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAAN 180
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ + G+ +G+ FQ+ DDLL+ E+L K
Sbjct: 181 Q-LEQLMSFQEAGKWIGLAFQIQDDLLEVEKTTEELGK 217
>gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
Length = 328
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+Q++ + ++T++ + +Q+ + L GGK+IR L +
Sbjct: 15 SIQDDLRAVETLMRSQADERYPDLQSALDLLLS-------AGGKRIRPTLTLLAGKMLRA 67
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L + AAIE +H +L+HDDL +D +RRG PT++ ++ ++ G+ L A
Sbjct: 68 KGEPLLHLAAAIEMLHTATLVHDDL--IDGSLLRRGMPTLNSRWSPGATVLTGDYLFARA 125
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + + S+ LS+ L M + + + KT +
Sbjct: 126 ANLAAQTDSIPVMKLFSE-TLSIIVGGELTQMFSTRCKADRTNYYQR------IYAKTAS 178
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L + +S A++ S+ E LR +G ++G+ FQ+ DD+LD + L K
Sbjct: 179 LFETSAKSAALLCLTSELHTEALRAYGYSVGMAFQIIDDILDYTGEQATLGK 230
>gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC
25291]
Length = 1804
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 15/246 (6%)
Query: 1 MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
M LP L++ D +++ + N + Y L GGK
Sbjct: 1411 MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGPGERGSNGLYQLILDYPLRGGK 1470
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R L + L A +E H LIHDD+ D + RRGKPT+HI +
Sbjct: 1471 ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDH 1528
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL----QGMLGGQMLDI 167
A+ G+ +L+ + + + ++ +++ ++ Q + +
Sbjct: 1529 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 1588
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
D + M++ + ++GA+ A A+ + L G +LG FQ+ DDL
Sbjct: 1589 TWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLESLGRHLGAAFQITDDL 1648
Query: 228 LDCEED 233
L+ D
Sbjct: 1649 LNLRAD 1654
>gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5]
gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5]
Length = 360
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 33 TQHNDRLLSAIRYALLG-GKKIRSFLV--------------------TECASLFNVNHLT 71
+ LL A RY + G GK +R LV + ++
Sbjct: 67 AELPSPLLDACRYVMTGTGKLVRPLLVASAFSSTYSHNDTIADKDNALASLLENDSDYDM 126
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
R A+E +H YSL+HDDLP MD+ +RRG+PT HI ++E TA++AG+ L T AFE++
Sbjct: 127 CRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVL 186
Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGA 187
+ T + L + M+ GQM I + + I + KTGA
Sbjct: 187 TADLPTFAPFDSAIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGA 246
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ A G I A A+ ++ L+ +++G+ FQ+ DD+LD
Sbjct: 247 LIEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDDILDVT 290
>gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
DSM 45100]
Length = 389
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 77/270 (28%), Gaps = 36/270 (13%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAI-RYALLGGKKIRSFLV 58
+ L + L ++ L+ L + + + + + + + GGK++R
Sbjct: 17 DWALHAPLSAVPAAVNHRLNQYLSASLQEFWGINPLFTQAIEVMGDFIVGGGKRVRPTFA 76
Query: 59 TE------------CASLFNVNHLTALRVGAAIECIHCYSLIHDD--------------- 91
A + + +
Sbjct: 77 WAGIRAGLESSGTSTAKASSRSQEEPTELANGFLSAISAFEFIQACALIHDDIVDQSDTR 136
Query: 92 ------LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
+ + R Y AI+ G+ L +A +++ + + +
Sbjct: 137 RGHPTVHREFERHHRDRKWLGSSEHYGISQAILIGDLALAWADDLLLDSGLSTQRLHQCR 196
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+ G + ++ + +I+ + GA +A AS+
Sbjct: 197 HAWRAMRTEVIGGQILDIAVEASGTENVDHAWDVIKYKTASYTVARPLHVGAALAGASEE 256
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E LR GE++G+ FQL DD L D
Sbjct: 257 LIEFLRTIGEDIGVAFQLRDDQLGVFGDPA 286
>gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp.
novicida U112]
gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
novicida FTE]
gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112]
gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
novicida FTE]
Length = 325
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ N ++ +R +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
lipophiloflavum DSM 44291]
Length = 380
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 71/256 (27%), Gaps = 33/256 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+ G L + L E ++ I T+ L + L GGK+IR
Sbjct: 31 VKGALEAFLDERYAEVEKI---------GPPVTRSVQHLRD---FILGGGKRIRPLYAWT 78
Query: 61 C---ASLFNV--------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
A + + I S P++ R
Sbjct: 79 GFFGARAAGGVGSEDPEAVLRAVSSLELIQACALIHDDIIDASDTRRGNPTVHRAVEARH 138
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ +A + + + ++GGQ
Sbjct: 139 SKDDLFGDSADYGRNEAILIGDFALIWAEDMWRYSGLSEAALTRAAEPWRGMRTEVIGGQ 198
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGI 219
+LDI E V M + + GA +A A + E R +G ++GI
Sbjct: 199 LLDIALEAAANESVEMANNVNRYKTAAYTIERPLHLGAAIAGAPADTIEAFRGYGRDIGI 258
Query: 220 IFQLADDLLDCEEDLP 235
FQL DDLL D
Sbjct: 259 AFQLRDDLLGVFGDEA 274
>gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51]
Length = 303
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS+ I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESPIIVELIKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
Length = 303
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238
>gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 394
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 80/233 (34%), Gaps = 18/233 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
L S+L++ ID + + + + + RY L GK+IR LV A
Sbjct: 69 SLTSQLKDYLAWIDREILNQAEEFDAGIVPLF--------RYVLASEGKRIRPLLVLLSA 120
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +E IH +L+HDD+ ++ VT+
Sbjct: 121 KGSGGIGENHLYLAVVVEMIHLATLVHDDIL---------DGASMRRGIPSVTSRWGSEI 171
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + + + + Q D + E + I +
Sbjct: 172 SVLLGDNLFAQALKVCCRLHPDIIQSVANGVCVVCSGEILQTRRRFDWNLLEEEYLKIIQ 231
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MKTG L CE A + AS+ E L FG+ LG +Q+ DD LD
Sbjct: 232 MKTGELFRIPCELAARLNSASRTVSEALGRFGQALGSSYQIYDDCLDLFGSEE 284
>gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
TW08/27]
Length = 338
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+G L + R++ DLLL+T + L + GGK+ R LV
Sbjct: 15 SGSLSDDISPALDRVE----DLLLETVGDCHEIVSHLL-------VSGGKRARPLLVLLT 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + + +R A IE IH SL HDD+ MDN YIR G T H + + AI+AG+
Sbjct: 64 SCMGSGINDAVIRAAAGIELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + + Q M+ GQ+ + +
Sbjct: 122 FLFAKAGVL----------GLNLDKRAIAVQTEAFQRMISGQLSETLGISDSLDPLEAYI 171
Query: 182 KMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
++ G + + + GAI+ AS + E LR FGE++G+ FQL DD++D K
Sbjct: 172 EVSRGKTGSLIAASAQVGAILGDASLSTLEPLRDFGESIGVAFQLVDDVIDLSGKSGK 229
>gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
20547]
Length = 324
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 18/224 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+++D +L +++ + A Y + GGK+ R L + L +
Sbjct: 17 MQQVDALLAEVVQHDDPF--------IAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPE 68
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ AA+E +H SL HDD+ MD+ +RRG P+ + +Y T+++ G+ L + ++
Sbjct: 69 VVKAAAAVELVHLASLYHDDV--MDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALV 126
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + I + + + + KTGAL+
Sbjct: 127 AELGPEAVRLQADTFVRLCAGQIRDERP-------VPAGVDPVDHLLGVLADKTGALIAA 179
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA + E + FGE LG++FQLADDLLD D
Sbjct: 180 AACYGAQFSGCDAATVELMGAFGERLGLVFQLADDLLDVASDAE 223
>gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 303
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
+RI+ +L L LL+A ++A+ GG +IR L AS + A
Sbjct: 5 RRIERVL---LAAIEPLSSPASPPGLLAATQHAVFPGGARIRPRLCLAVASAYGDPAPEA 61
Query: 73 LRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AA E IHC SL+HDDLP D+ IRRG+P+VH + E A++AG+ L+ AFE +
Sbjct: 62 ADAAAAAVELIHCASLVHDDLPCFDDAPIRRGRPSVHRAFGEPIAVLAGDQLIVLAFEAL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + + ++ G GM G + E + + ++ KTGAL
Sbjct: 122 ARGAFHAMASGVTDARRAVRFFEVLGGGVGMPQGIIAGQAWESEAKVPLSAYRRAKTGAL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A GA+ A G+ +G +Q+ADD+LD D+ K
Sbjct: 182 FEAAATLGALSAGQDG---AAWGDLGQRIGEAYQVADDVLDLVGRPEDMGK 229
>gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99]
gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99]
Length = 303
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC-ASLFNVNHL- 70
+R ++ L + L + L A L GGK+ R L SL
Sbjct: 14 ERFESFLKNHYLHLEGF-----HPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYS 68
Query: 71 ----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY
Sbjct: 69 NQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTY 128
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+FE++S+ + + + +LS I + ++ ++ Q+ + + KT
Sbjct: 129 SFELLSNSLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTA 188
Query: 187 ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + G + + + E + L+ FG +G+ FQ+ DD++D +D
Sbjct: 189 KLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238
>gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL J2-064]
gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes FSL J1-175]
gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
Length = 326
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori B38]
gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori B38]
Length = 303
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLIST 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG +G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238
>gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e]
gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL
R2-561]
gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL
J2-003]
gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e]
gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
Length = 326
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica LVS]
gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
Length = 325
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ + + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALVKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVILFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74]
gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74]
Length = 385
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 9/237 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLV 58
+ + ++ + + +L + + A M + A + G GK +R L
Sbjct: 40 PDVTALVERSRALVTPVLRSAVDRLAPPMDSVSAYHFGWTDAEGNPVSGDGGKAVRPALA 99
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + T + A+E +H +SL+HDDL MD RR + TV + AI+
Sbjct: 100 LISAEVTGAGAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWKVHGPAQAIL 157
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L A E++ T L + + + +
Sbjct: 158 VGDALFALANEVLLELGTAEAGR---ATRRLTRATRALIDGQAQDISYEHRDRVTVEECL 214
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL D
Sbjct: 215 EMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLLGIWGDPE 271
>gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
Length = 300
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E RI ++ + Q + L+ AI Y++ GGK+IR L+ E +
Sbjct: 4 DEKLARIGQAIETF------YAQKAVSADLIEAILYSVNAGGKRIRPLLLLELLEGLGME 57
Query: 69 HLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ H ++ E AI+AG+ L +
Sbjct: 58 LTEAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLPSHKKFGEAMAILAGDSLFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL + + + I ++ I KTG
Sbjct: 118 YALIAEAALPSQIKVNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQTIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A ++++E+L+ G+ LG+ FQ+ DD+LD DL K
Sbjct: 178 LLTYPFIAAGLIAEVGESQQEKLKAIGQLLGLAFQVRDDILDITANFEDLGK 229
>gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1]
gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1]
gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 391
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 9/234 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
L L+E ++ + L+ + L + Y L K +R L
Sbjct: 11 LTGYLEECRLQVIQEIQRLIP------PDRPAAFLYELMLDYPLREAKGLRPALCIAACR 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
ALR A+E H LIHDD+ + R +
Sbjct: 65 ASGGTLEAALRPAVALELYHNAFLIHDDIEDESHLRRGRPTLHQLHGVPVAINVGDAMLA 124
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
L+ + + L ++R ++ +G + + D V M++
Sbjct: 125 LSLQPLLDNIGFIGLGPSLRILQEVARMARESAEGQALELDWIRRGHWALEDADYVRMVE 184
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ A + +L F LGI FQ+ DDLL+ ++
Sbjct: 185 QKTCWYSFITPVTLGALAARQNPAHTAQLAEFARCLGIAFQIQDDLLNLSGEVG 238
>gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S]
gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161]
gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818]
gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900]
gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900]
gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818]
Length = 326
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Helicobacter pylori India7]
Length = 303
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G +++ + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVVSGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEK 238
>gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes Clip81459]
gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 220]
gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A]
Length = 326
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
Length = 338
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ + I+ ++ + + N + S GGK+IR + A +F
Sbjct: 27 DMESINQLIISMAKSNVEMIPEISNHLISS-------GGKRIRPMITLAAAHMFGYQGDK 79
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ A+E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF+++
Sbjct: 80 HIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARMIWGNQASVLVGDFLLGQAFKMM 137
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ + + +Q ++ + + I KT AL
Sbjct: 138 VDVGSLEALSVLANAAAIIAEGEVMQL------SAAKNIETNVSNYLKIINAKTAALFSA 191
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E G I+A E+ L +G +LG+ FQL DD+LD L K
Sbjct: 192 AAEVGPIIAGYGHEERSALHQYGLSLGVAFQLIDDVLDYSSSAQYLGK 239
>gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1]
gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
Length = 288
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
+I++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPQINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A++S + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
Length = 307
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
I LD + + S + A+RYALLG GK++R+ L+ E
Sbjct: 17 SFSAERAAIQHALDGVCRRWLSALAPATA----EAVRYALLGEGKRLRAILLIEAYRACG 72
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A + A+IE +H YSL+HDDLP MD+ +RRG+PTVH + A AG ++
Sbjct: 73 GTGD-AADLAASIEVVHAYSLVHDDLPCMDDDDMRRGRPTVHKVHGVGVATAAGLAMVPL 131
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML----DIQDEFIDETQVFMIQK 182
A L + + G + + + + + +
Sbjct: 132 AARSAWHASKALGLSDVVAGDIVRELMEASGGGGMIGGQLLDLEAEGAPLSLESLERVHR 191
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+KTGAL+ + GA A A + + L +G ++G+ FQ+ADD+LD +L K
Sbjct: 192 LKTGALIRASVTLGARAALAPEARRHALDRYGASIGLAFQIADDVLDVTATTDELGK 248
>gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z]
gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z]
Length = 322
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS- 63
L L+ + ++D D+ S +Q +A + GGK++R LV A
Sbjct: 3 LDEYLKSVAAKVDMEADEYSKAVDSTLQK-------AASHLLVSGGKRLRPALVLLSAES 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + A+E H ++L+HDD+ MD +RRG+PTVH+ ++E TAI+AG+ L
Sbjct: 56 IRKGASEDIFQAALALEWTHTFTLVHDDI--MDGDSLRRGRPTVHVVWNEATAILAGDVL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AFE + K ++ + + L + + + + +
Sbjct: 114 YANAFEYLCRVKNATAESKVIAVQMLAHSCHELCEGQQEDVSFETRSDVTLEEYLSMVRK 173
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTG L A GA +A + L G N GI FQ+ DD++D
Sbjct: 174 KTGVLYAAAAGIGAALAGGDVKQISALYTLGLNTGIAFQIQDDIIDL 220
>gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1]
gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1]
Length = 303
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H+++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
Length = 288
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
+I++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPQINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A++S + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
DSM 15272]
gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
DSM 15272]
Length = 332
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 13/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
RI +D++ Q A+ + + +A GGK+ R +V CA + +
Sbjct: 15 ARILAGVDEVERQLAAAVDSPEAFVAEAAAHLLNAGGKRFRPLVVALCAEFGDPAAPGVV 74
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+E H +L HDD+ MD RRG + + ++D AI+ G+ L A +I+S+
Sbjct: 75 PSAVVVELTHLATLYHDDV--MDEADKRRGALSANARWDNTLAILVGDYLFAQASDIVST 132
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ I+++ L + + G +Q + KTG+L+ +
Sbjct: 133 LGPE-AVRIQARTFSRLVRGQIRETIGPGDGDPLQHY-------LGVVADKTGSLIATSA 184
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
GA+M+ A + L FGE +G FQL DD++D + K
Sbjct: 185 RFGAMMSAAPVEVEHALTEFGERIGAAFQLRDDIIDVASETGESGK 230
>gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 332
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 13/237 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+Q ++R++ +L L + + L++A+RYA L GGK+ R+ L +L +
Sbjct: 28 WMQAGAQRVEQVLARRLCA-----GNEESTELMTAMRYATLQGGKRTRALLCLAAGALAD 82
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+GAAIE +H +L+HDDLP+MDN +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 83 TPAHVLDDIGAAIEMMHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAH 142
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++ + I L+ + + + + + + + +MK+G
Sbjct: 143 AFLTLAGVDASGEIRIALVRELAHAVSADGAAGGQAMDMALVGQSVGLDTIMAMHRMKSG 202
Query: 187 ALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AL+ + G + A L + G+ Q+ DD+LD D L K
Sbjct: 203 ALVRASVRMGTLCALPEGGVHAELAAALDRYSACFGLALQVVDDILDATADVATLGK 259
>gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
M23590]
gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
M23590]
Length = 335
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 16/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ K+++ +L+ ++ ++ L A + L GGK++R V + F
Sbjct: 23 INNEIKKVNNLLEQIIKS--------NDTVLEEASLHLLSSGGKRVRPAFVILSSQ-FGK 73
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 74 SKQSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALG 133
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E +S I S ++ + Q ++ KT
Sbjct: 134 LEQLSEVNHPRIHTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRR------INRKTAL 187
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ A E GA+ ++ASQ +L+ G +G+ FQ+ DD+LD K
Sbjct: 188 LIQLATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENK 236
>gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Francisella cf.
novicida Fx1]
Length = 325
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N + L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ N ++ +R +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846]
Length = 329
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MNGGLPSKLQE-NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ KL + + ++++ + L S + Y + GG K+IR +
Sbjct: 7 MSIDEIQKLADPDMQKVNQNILAQLNSDVSLIGQLGF--------YIVQGGGKRIRPLIA 58
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A ++ +E IH SL+HDD+ +D +RRG+ T + ++ +++
Sbjct: 59 VLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVL 116
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ I + L Q M + ++
Sbjct: 117 VGDFIYTRAFQLVAQLESLKILGIMADATNVLAEGEVQQLMNVNDPETSEANYMR----- 171
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD + L
Sbjct: 172 -VIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQALG 230
Query: 236 K 236
K
Sbjct: 231 K 231
>gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
manganoxydans SI85-9A1]
gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
manganoxydans SI85-9A1]
Length = 318
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
G ++ RID L +L+ A QT + + ++ L GK++R +
Sbjct: 6 TDGFRTEAAALIARIDARL-AVLVPRALPGQTGLDLAIRESV---LAPGKRLRPMMAALT 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + A+ G A+E +H SLI DDLP MD+ +RRG+P H+ + E A+++
Sbjct: 62 AGDLGGDEDVAVDAGCAVEMVHAASLILDDLPCMDDATMRRGRPAAHVTHGEDVAVLSAI 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A+E+++ L R + + LT +G++G++GGQ D++ + +
Sbjct: 122 AILSGAYEMLA-RVEGLSPAARLEAVTVLTRAVGVEGLVGGQFADLRGGRAERPLHEIAA 180
Query: 182 K--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
KTGAL A E+GAI A A + + LR F LG FQL DDLLD
Sbjct: 181 TNGRKTGALFLAAVETGAIAAGAGETTRAHLRGFATELGHAFQLLDDLLD 230
>gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 305
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ L + ++ + +L+ A GGK+IR V + V
Sbjct: 2 IEKELKKTVASEQPLVE-EAALQLIEA------GGKRIRPVFVLLAGKFGDYKLDAIKHV 54
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+ G+ L + E I++ +
Sbjct: 55 AVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIE 112
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
S +L + Q D + + K KT L+ +C+
Sbjct: 113 IPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTYLRRIKRKTALLIAASCQL 166
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAI A A+ + RL +G +G+ +Q+ DD+LD K
Sbjct: 167 GAIAAGANCDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 207
>gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
lugdunensis HKU09-01]
gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
lugdunensis HKU09-01]
Length = 318
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 16/229 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+ K+++ +L+ ++ ++ L A + L GGK++R V + F
Sbjct: 6 INNEIKKVNNLLEQIIKS--------NDTVLEEASLHLLSSGGKRVRPAFVILSSQ-FGK 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A+ + +D RRG+ T+ ++D+ TAI+ GN LL
Sbjct: 57 SKQSEDTYKVAVALELIHMATLVHDDVIDKSDKRRGRLTISKKWDQTTAILTGNFLLALG 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E +S I S ++ + Q ++ KT
Sbjct: 117 LEQLSEVNHPRIHTIISTSIVDVCRGELFQFQDQFNSNQTISNYLRR------INRKTAL 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L+ A E GA+ ++ASQ +L+ G +G+ FQ+ DD+LD K
Sbjct: 171 LIQLATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENK 219
>gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
holarctica FSC022]
Length = 325
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVILFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
Length = 308
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 20/225 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
+ I+ L + L +L RY + GG K++R + +
Sbjct: 4 LEAIERRLLEELNPKVK--------LVLETGRYLIDGGGKRLRPLITMLSCGMCGGEPED 55
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AL +G +E IH SL+HDD+ +D RRG+ + ++ + A++ G+ + A +
Sbjct: 56 ALPLGVGLEYIHAASLLHDDV--VDGAKKRRGRESANLIFGNEVAVLTGDYMYAKALHLF 113
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ T I S+ ++ + L+ G+++ + F I KT L
Sbjct: 114 ATHGTIDMIRIVSRAVMDMAEAQVLELSRVGELITE-------EEYFQIIDGKTAVLFGA 166
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
G + + RL G +G FQL DDLLD + K
Sbjct: 167 CVSVGGLAGGCDEE--GRLYEVGLRMGRAFQLIDDLLDYAGNSEK 209
>gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
87.22]
Length = 409
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
L++ +D L + M+ A G GK IR LV
Sbjct: 77 AEILEQARVSVDPELRRAVGSLPRSMRRVARYHFGWEDADGTPAAGNAGKAIRPALVLAA 136
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+R AA+E +H ++L+HDD+ MD RR + T + AI+AG+
Sbjct: 137 VHALGGRESVAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRATAWTVFGVPDAILAGD 194
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ A +++ ++L + Q ++ + +V +
Sbjct: 195 AMQALAQRLLAEDPHPASAAAAARLASCVVELCEGQH-TDTELEGRPPLDVTLDEVLTMA 253
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTGAL+ AC GA+ A A++ + E L FG G+ FQL DD++ D K
Sbjct: 254 EAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLIDDVIGIWGDPSRTGK 311
>gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
Length = 315
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 20/250 (8%)
Query: 1 MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
M + S L K++DT +++ L + A YAL GGK++R +
Sbjct: 23 MKKSIETNSLLTAYVKKVDTAIENHLDLLGP------PSPVRDACAYALSTGGKRVRPSI 76
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A L +IE H SL+ DD+PSMDN RR +P+VH ++ E A+
Sbjct: 77 TLMVADALGGMGDVTL-SALSIEYFHTASLVVDDMPSMDNDDERRSQPSVHKKFGEAAAL 135
Query: 118 IAGNGLLTYAFEIIS----------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ GL+ + +I+ D + + + N GL G GGQ LDI
Sbjct: 136 LVSYGLIGAGYGMIAENGRLLLDQNIFFADSVDLRCRLALENASFNTGLNGATGGQFLDI 195
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + I MKT +L A +G + + + ++++ + G+ FQ+ADDL
Sbjct: 196 RPPDLSTETLKKIIHMKTSSLFEVAFVNGWLFGGGALEKLDQVKQAAAHFGLAFQIADDL 255
Query: 228 LDCEEDLPKK 237
D E+DL K
Sbjct: 256 GDMEQDLRNK 265
>gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
Length = 371
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 51 IQQDLKDEVTKLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 103
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 104 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 161
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I + I K K
Sbjct: 162 SQSFKLMVA-----SGSIKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSK 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 217 TAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 264
>gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
Length = 323
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 17/225 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ ++ ++ + S + Y + GGK++R L A N+
Sbjct: 13 DMLAVNQLIQKQVNSDVSLINQLGF--------YIVNSGGKRLRPLLTVLAARALNIQTE 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F++
Sbjct: 65 QHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + I S + LQ M + + KT L
Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPDTTE------ESYMEVIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A ++ S+ + ++ +G+ LG FQL DD++D D
Sbjct: 177 AATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSE 221
>gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 323
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 17/225 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ ++ ++ + S + Y + GGK++R L A N+
Sbjct: 13 DMLAVNQLIQKQVNSDVSLINQLGF--------YIVNSGGKRLRPLLTVLAARALNIQTE 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F++
Sbjct: 65 QHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETANEVFGNQASVLVGDFLYTRSFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + I S + LQ M + + KT L
Sbjct: 123 MVTLDSMRVMQILSDATNVIAEGEVLQLMNCNDPNTTE------ESYMEVIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A++ S+ + ++ +G+ LG FQL DD++D D
Sbjct: 177 AATLLAAVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYASDSE 221
>gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1]
gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1]
Length = 303
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLT 71
+ L H++ H + L GGK+ R L ++
Sbjct: 14 ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ ++ Q+ + + KT L+
Sbjct: 134 SNALLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
Length = 281
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 21/233 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ LQ R++ L+ +L D L +R+ AL GGK++R +
Sbjct: 1 MMEYLQRRRDRVEERLEAVL-------DGVEPDELADEVRHVALAGGKRVRPTVTVLVCE 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A+ IE +H SL+ DD+ +D +RRG P+ + AIIA +GL
Sbjct: 54 ALGGEPADAVEFAVGIELVHNASLVIDDI--IDESDVRRGTPSAWAAFGHGPAIIASDGL 111
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AF + S S + + G+ ++ + +ET+ + +
Sbjct: 112 LGEAFALFS-----------SDERAMQAVTESMVELGEGEATELVSQPTNETEYIELARR 160
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTGAL A E GAI A A E + E +G+ FQ+ DD+LD D K
Sbjct: 161 KTGALFRAAAELGAIAADADAYTVEAFGQYAERVGVAFQMRDDVLDATADAEK 213
>gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related
protein [Thermoplasma acidophilum DSM 1728]
gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related
protein [Thermoplasma acidophilum]
Length = 322
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 85/240 (35%), Gaps = 22/240 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M+ L L + ++ L + + L RY + GGK+ R L
Sbjct: 1 MDWELE--LHSKVEEVNARLLETVKSEE--------PDLDRMARYTIEAGGKRFRPLLTI 50
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + + A ++ +DN +RRG+PT+ + AI+
Sbjct: 51 LAYES-STDEPYFKILDLATGYELIHTASLIHDDIIDNSPMRRGRPTLSYKEGVNNAIVV 109
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L A+E+ S + + + L L+ + G + + +
Sbjct: 110 ADYLFAKAYELGSRYGPIVS-KVMADASSRLAEGQILEAVNLGNLNISE------DTYYR 162
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I + KT I A+A N + L F NLG+ FQ+ DD+LD D K
Sbjct: 163 IIENKTAHFFEACARGATIAANADLNTRNMLSGFAFNLGMAFQVTDDILDITGDDKYTGK 222
>gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
Length = 323
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSVER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+R+ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHMHKGNKVAILSGDYLFAKAFQI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S I S ++ L +Q ++ D ++ +TQ KT M
Sbjct: 126 VSEMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
E G ++ S++E L+ +G LG+ FQ+ DD++D E K
Sbjct: 180 GCMELGGLLGGWSESEIVELKKYGHALGMAFQITDDIMDYRETTETTGK 228
>gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
Length = 325
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N + L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ N ++ +R +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
Length = 227
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 3/225 (1%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ +K+ L +T + + A RY+LLGG K+IR+ LV + N
Sbjct: 2 DYAKQYQEYLARANQALEKACETFLPEESEVCRAARYSLLGGGKRIRAVLVLAVCDMLNG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A + AA+E +HCYSLIHDDLP MDN +RRGKP+ H + E TA++AG+ LLT A
Sbjct: 62 SAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDLRRGKPSCHKAFGESTAMLAGDVLLTEA 121
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++++ ++++ L L + E Q+ +I + KTGA
Sbjct: 122 FNVVANAPASPIVSVQAAKALGAGAGSHGMVYGQELDLKYEALAATEEQLRLIHRNKTGA 181
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L+ A + GA A A++ + + L + +G++FQ+ DD+LD
Sbjct: 182 LINAAVQMGAAAAQANETQCKELEDYAFGIGLVFQIVDDVLDVTS 226
>gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
Length = 325
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 89/228 (39%), Gaps = 9/228 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + I+ ++ + M +Q L Y + GK++R V A + +
Sbjct: 4 VAKIKLPIEKEMELFEKKFRESMTSQV-SLLNRITHYIVNRKGKQMRPMFVFLIAKMCDE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ A ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 63 GNVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ ++ + + I + KT
Sbjct: 123 LLLSIDHGDFDLLKIISVAVREMSEGELLQIEKARRLDITEEIYFE------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ C GA +AS+ + E +R FGE +G FQ+ DDL D D
Sbjct: 177 LIAACCAMGAKSVNASEGQVENMRAFGELIGTAFQIKDDLFDY-GDTA 223
>gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium
HF0200_05J13]
Length = 339
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 81/233 (34%), Gaps = 7/233 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L ++L E + L L + + + + +A+ L GK++R V A
Sbjct: 11 DTLTARLIEIRTWLQDDLATLEREIIAPLPEVTDLGQRAAVHLLGLPGKRVRPLCVVLAA 70
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
AI C +S +D G RRG + Y +++ G+
Sbjct: 71 RA-GGAPFNEAVKQLAIACELVHSATLLHDDVLDEGSERRGAVAARLAYGNSASVLGGDY 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L ++ + + K L + G+ Q+ D I
Sbjct: 130 L------LVDALRRVYKTGEHGLLSDLMDVIDGMVKAEVAQLERRGKFDADRDAYLEIIY 183
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT A+ + +G I S+ + L +G +G+ FQ+ DD+LD +
Sbjct: 184 GKTAAIFEWGLRAGGIAGGLSEEAAQGLGKYGAAIGMAFQVVDDILDLAGESE 236
>gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
dimethylallyltransferase / geranyltranstransferase /
farnesytranstransferase) [Haloquadratum walsbyi DSM
16790]
gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
(probable dimethylallyltransferase / probable
geranyltranstransferase / probable
farnesytranstransferase) [Haloquadratum walsbyi DSM
16790]
Length = 348
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 32/253 (12%)
Query: 1 MNGGLPSK--LQENSKR---IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIR 54
M+ + L+ R ++ LD + + Q +RL A RY L GGK++R
Sbjct: 1 MSSDATEERVLEAVRARRTLVNDALD-------TDVPMQSPERLYEATRYLLEAGGKRLR 53
Query: 55 SFLVTECAS----------------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ A + + + + +IE I ++LI MD+
Sbjct: 54 PTVALLTAESLADVDPLTADYRSFPALDGSEVDVMSAATSIEVIQSFTLI--HDDIMDDD 111
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+RRG P VH +YD TAI+AG+ L AFE++S+ + + + L+ T +G
Sbjct: 112 DLRRGVPAVHREYDTETAILAGDTLYAKAFELLSNTGADPANGVAAVSRLATTCTQICEG 171
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + + + ++KT L A + A++ A + + L +G + G
Sbjct: 172 QALDVEF-EHRDAVLPEEYLEMVELKTAVLYGAATSTTALLLDADADVVDALYQYGIDAG 230
Query: 219 IIFQLADDLLDCE 231
FQ+ DD+LD
Sbjct: 231 RAFQIQDDVLDLT 243
>gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
Length = 327
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 7 IQQDLKEEVTQLNDLIISCLKSDTELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPTV++ + T+I+ G+ L
Sbjct: 60 FDYKGDNHIKLASAVEFIHAATLLHDDV--VDDSTLRRFKPTVNVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ I++ +L+ I +G + + + I + I K K
Sbjct: 118 SQSFKLM-----IASGCIKAMNVLARASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L ACE GAI+A E ++ FG LG IFQ+ DDLLD
Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLDYLG 220
>gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D]
gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
Length = 325
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E+ + +D ++ L + Q + ++SA GGK++R ++ A+
Sbjct: 13 VAEDMRAVDAVIRRRLGSEVVLIN-QIGEYIISA------GGKRLRPVILLLVANALGYK 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF
Sbjct: 66 GEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLYSRAF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I + ++ LQ + D + E + + + KT L
Sbjct: 124 QMMVQANSMRIMQILADATNIISEGEVLQLLNM------HDPDVTEERYLQVIRYKTAKL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA+++ A +E +G +G FQ+ DDLLD
Sbjct: 178 FEAAAQIGAVLSGAGAAIEEAAAEYGRRIGTAFQIIDDLLDYTS 221
>gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 340
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 85/238 (35%), Gaps = 19/238 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTA 72
++ +LD ++ + ++ +L + GGK+ R +V + A
Sbjct: 1 MNGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAA 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK---------------PTVHIQYDEVTAI 117
VGAA E +H ++HDD+ D + A+
Sbjct: 61 AHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAAV 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
IAG+ L A+ +I + + +L G L + + ++
Sbjct: 121 IAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDEI 180
Query: 178 FMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+++ ++GA++A AS L FG ++GI +Q+ DD+L D
Sbjct: 181 LRMERLKTAVYSFEAPLQAGAVLAGASPAIVSALGDFGRDIGIAYQVVDDVLGVFGDE 238
>gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
Length = 324
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTECASLFNV 67
N +I+ ++ ++ + + ++ I+Y + GGKKIRS ++ A
Sbjct: 2 NINQINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + IE IH +L+HDD+ +D+ RRGK T +I + +I+ G+ + T A
Sbjct: 62 NKTQHTILATLIEFIHTATLLHDDV--IDHSTTRRGKTTANIIFGNPASILIGDFIYTRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F++++ ++ ++ + + + LQ + ++ I KT
Sbjct: 120 FQMMTELQSLRILSLMADAVNIIAEGEILQLTYCNDPTITMNNYMQ------IIYKKTAR 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L A +S AI+AHA+ +++ L +G+ +GI FQL DDLLD
Sbjct: 174 LFEVASQSSAILAHANIQQEQALSNYGKYIGIAFQLIDDLLDY 216
>gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
Length = 341
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 3/215 (1%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + DR+ RYALL GK +R L+ A + + A+E +
Sbjct: 24 LRRELDLRWPAGGDRMHEIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYL 83
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI--IAGNGLLTYAFEIISSPKTQLKD 140
H SLIHDD+ D+ + + A + + E ++
Sbjct: 84 HVASLIHDDVIDGDDLRRGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDTAV 143
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+++ ++ + ++ + +KTGAL+ AC +GA+++
Sbjct: 144 LAAIRVLAEAGGDLCRGQVQEAELAAAWPGAGGLDAYREMASLKTGALLRAACRAGALLS 203
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S E E + F +LG+ FQ+ DDLL D
Sbjct: 204 GGSPEETEAVTVFAGHLGLAFQMYDDLLPYLADPA 238
>gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica URFT1]
gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 325
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ + + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALVKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVILFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ DD+LD D
Sbjct: 173 AKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAE 225
>gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
Length = 288
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
+I++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPQINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A++S + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
Length = 259
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 47 LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+LGGK++R L ASL N N A R A+E IHCYSL HDDLP MDN +RRG+P
Sbjct: 1 MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQP 60
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
T H+ + E TA++AG+ L + AFE++ + + L M+ G
Sbjct: 61 TCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCG 120
Query: 163 Q--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLG 218
Q L + + I + ++ I + KTGAL+ A GA I + Q +LR +G+ +G
Sbjct: 121 QVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQA-IPKLRQYGQAIG 179
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQ+ DD+LD
Sbjct: 180 LAFQVQDDILDITSSTE 196
>gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 326
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 17/235 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + + E+ +D ++ L + + RY + GGK++R L+
Sbjct: 7 TSAILALIAEDMHEVDKVIGLRLQSSVPLIG--------EIARYIISAGGKRLRPALLLL 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A IE IH +L+HDD+ +D +RRG+PT + + +++ G
Sbjct: 59 MSGALGYQGAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTANENFGNPASVLVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + AF+++ I S+ + Q M + D +DE +
Sbjct: 117 DFLHSRAFQMMVDADDMRVMQILSEATNIIAEGEVQQLM------NTHDATLDEQGYLEV 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L + A++A A +E +G+ LG FQ+ DD+LD + +
Sbjct: 171 IRSKTAKLFEASARLAAVLARAPAPIEEACAEYGKALGTAFQVIDDVLDYDGNSA 225
>gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
RC-I]
gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
RC-I]
Length = 340
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 93/242 (38%), Gaps = 21/242 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIR 54
S L+ S + + +L L + Y L GGK++R
Sbjct: 7 SILESYSVYTNQEIKRILDSRRKV------GLLGDMMMYHLGWRDEELNPCEAKGGKQLR 60
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
S + + AL AA+E +H +SLIHDD+ D RR +PTV +
Sbjct: 61 STMCLLACEAISGKFDNALPGAAAVELVHNFSLIHDDIE--DGDETRRHRPTVWKLWGVP 118
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI G+ + ++ I K + + I+ + + T +G +
Sbjct: 119 QAINTGDAMDVVSYIAILELKVKPETMIKVLRVFNDTIMQLCEGQYLDMDFQTRKTVTV- 177
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KT AL+ + GA+ A Q + + FG +GI FQ+ DDLL D
Sbjct: 178 EEYIEMITGKTAALIEASTAIGAMAATDDQKVIDHFKAFGHKIGIGFQIQDDLLGIWGDP 237
Query: 235 PK 236
K
Sbjct: 238 SK 239
>gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 325
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
Length = 288
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+I + L+ A + + H + ++ GGK+ R LV + +
Sbjct: 5 QILNDFESFLISQAPQIPSFHPHYEQAVWEMMK---NGGKRFRPALVFCVVNALAPQLIK 61
Query: 72 A-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+IECIH YSLIHDDLP MDN +RRG T+H +YDE A++ G+GL TYAF +
Sbjct: 62 NAFLPALSIECIHTYSLIHDDLPCMDNAPLRRGHATLHTKYDETLALLVGDGLNTYAFAL 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + + + L+L IG + +D+ + ++ +I KT L+
Sbjct: 122 LSQARLDAQVRLELIHSLALNAGIGGMVLGQMLDCAFEDKKLSLQELQIIHTNKTAKLIA 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + GAI+++A + + FG LGI FQL DDL+D
Sbjct: 182 TSLQFGAIISNAKAHFASSIYEFGLKLGIYFQLRDDLIDA 221
>gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 10/220 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLTALRV 75
++ L L + ++ L +A + GGK++R LV A L +++ +T +
Sbjct: 1 MEQLRLNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAELMHMSDITDRQR 60
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A ++ +D+ RRGK T+H Y AI+AG+ L + +++
Sbjct: 61 RLAEITEMIHTASLVHDDVLDDCDTRRGKETIHTLYGARVAILAGDFLFAQSSWFLANLD 120
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ SQ++ Q + + + + KT +L+ +C+S
Sbjct: 121 NLEVIKLISQVIADFADGEISQA------GALFNCDLTLDEYLEKSHNKTASLIAASCKS 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A+ + +++ K + +G++LG+ FQ+ DD+LD +
Sbjct: 175 AAVFSEVTESVKVDMYEYGKHLGLAFQVVDDILDFTQSEE 214
>gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 353
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 13 SKRIDTILDD--LLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68
++++ T +DD L++ A H + + D L RY L GGK++R L A L N
Sbjct: 23 ARQVATAVDDGLALVEEALHREVRFADNLADVTTRYLLEAGGKRVRPMLTLLTAQLGKGN 82
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L+ A+E H SL HDD+ MD+ +RRG PT + A++ G+ L A
Sbjct: 83 TPEVLQAAQAVEITHLASLYHDDV--MDDSQMRRGVPTAQFVWGNSVAVLTGDLLFARAS 140
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
+++S + + GQ+ + E V ++ KT
Sbjct: 141 KLVS----------SLGERAIQLQADTFERLCLGQLHETIGPQDGEDAVAHYIRVLEDKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
G+L+ A + G + + A + +E + FGE +G+ FQL DD++D +
Sbjct: 191 GSLIAVAAQMGIVFSGADSSYEEPVVTFGEKIGVAFQLIDDVIDLSSE 238
>gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
Length = 323
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLEGVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSVER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+R+ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFQI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S I S ++ L +Q ++ + ++ +TQ KT M
Sbjct: 126 VSEMPNMKYLQIFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E G ++ S++E L+ +G LG+ FQ+ DD++D
Sbjct: 180 GCMELGGLLGGWSESEIVELKKYGHALGMAFQITDDIMDY 219
>gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans]
Length = 302
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
++ ID L+ LL D + +A+R AL GK+IR L+ A
Sbjct: 17 EQLLADIDRRLEQLLPVEGER------DFVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V+H L + A+E +H SLI DD+P MD+ I G+PTVH QY E AI+A LL+
Sbjct: 71 VSHEGLLDIACAVEMVHAASLILDDMPCMDDAQIVGGRPTVHCQYGEHVAILAAVALLSK 130
Query: 127 AFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I+ R+ LS + + L D+ + M KT
Sbjct: 131 AFGVIADADGLTALAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKRRSAEAILMTNHFKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A+AS ++ L F +LG FQL DDL D D K
Sbjct: 191 STLFCASMQMASIVANASSERRDYLHRFSLDLGQAFQLLDDLTDGMADTGK 241
>gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549]
Length = 325
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ + R++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
Length = 325
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 19/239 (7%)
Query: 1 MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M + + +D ++++ + + + ++ A GGK++R
Sbjct: 1 MVIDFKQDILAPVATDFAAMDHLINEGISSKVGLVMSVS-KHVVEA------GGKRMRPI 53
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A +++++ + AAI + ++ +D +RRG+PT + ++ TA
Sbjct: 54 MCLLAARACDLDNMQNAQRLAAIIEM-LHTATLVHDDVVDESGLRRGRPTANATWNNQTA 112
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L+ AF+++ S + LQ E
Sbjct: 113 VLVGDFLIARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQL------QSQHQPDTTEET 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I KT L A E AI+A + +E LR F + G FQ+ DD+LD D
Sbjct: 167 YLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQIIDDILDYTSDAE 224
>gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG]
gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp.
tularensis FSC033]
gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG]
gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 325
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 2 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 61 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 119 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 172
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D
Sbjct: 173 AKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 225
>gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 328
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + ++ + + + + T L+++ GGKKIR L+
Sbjct: 9 SSKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINS------GGKKIRPKLIFIM 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ N + + + + A++E IH +L+HDD+ +D R G T + + ++I+ G+
Sbjct: 63 CKMLNYSGESRVNIAASVEFIHNATLLHDDV--LDESKARHGVATANKIWGNKSSILVGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LLT AF + +I S+ L Q I+ + + I
Sbjct: 121 LLLTLAFRWLIECGNLSVLSILSKASNLLVKGEIKQMTTRFDPNTIRKNYFN------II 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
KT +L E+ ++++ A+ +E ERLR FG N G+ FQ+ DD+LD + L K+
Sbjct: 175 GEKTASLFSACSEAASVVSGATSDETERLRNFGFNFGMAFQIIDDVLDYTANQCTLGKQ 233
>gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
Length = 323
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + +++ ++ ++ L + + Y + GG K+IR +
Sbjct: 1 MDIKAIQALSKQDMDAVNELILARLQSDVALVNQVGY--------YIVNGGGKRIRPLIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
T A + V A IE IH +L+HDD+ +D +RRG+ T + + +++
Sbjct: 53 TLSARALGYQGQQHVDVAAIIEFIHTSTLLHDDV--VDESDMRRGRKTANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + +F++++ +I S + LQ M + +
Sbjct: 111 VGDFLYSRSFQMMAKLNNSKIIDILSDATNVIAEGEVLQLMNCNDADTDE------KRYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L A + A++A + ++ + +G +LG FQL DD++D D
Sbjct: 165 DVIYYKTAKLFEAATQLAAVIAEQPADIEQAMIDYGVHLGAAFQLIDDVMDYTSDA 220
>gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis]
gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination
vector pL2-1]
gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector
pELR-1]
Length = 302
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
++ ID LD LL D + +A+R AL GK+IR L+ A
Sbjct: 17 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+
Sbjct: 71 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130
Query: 127 AFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I+ R+ LS + + L D+ + M KT
Sbjct: 131 AFGVIADADGLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A+AS ++ L F +LG FQL DDL D D K
Sbjct: 191 STLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241
>gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
Length = 350
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 59 GGKAVRPALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 116
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L+ A EI+ T T L +
Sbjct: 117 KVHGPAQAILVGDALMVLANEILLELGTVEAAR---ATRRVTTATRALIDGQAQDISYEH 173
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ AC GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 174 RERVTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLAFQAVDDLL 233
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 234 GIWGDPVSTGKQ 245
>gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 24/242 (9%)
Query: 13 SKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLF 65
+ ++ + DDL L + N L++A + GGK++R LV L
Sbjct: 23 ADLVNPVSDDLRLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQLS 82
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N+ L A ++ +D RRGK TVH + A++AG+ +
Sbjct: 83 NIQELRPQHRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFMFA 142
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ +++ + SQ++ Q + KT
Sbjct: 143 QSSWYLANLDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNY------LDKSYYKT 196
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDL 234
+L+ + +S AI + ++ + + +G +LG+ FQ+ DD+LD DL
Sbjct: 197 ASLIASSTKSAAIFSDSTPSVSNAMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGSDL 256
Query: 235 PK 236
K
Sbjct: 257 SK 258
>gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
Length = 319
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 16/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + L +++ ++ D + GGK++R LV ++
Sbjct: 5 DFTPDLPTLLEAFELRLREVVRSEVEFVRLIEEDLV-------TAGGKRVRPRLVFLASN 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A+E +H SL+HDDL +D+ RRGK +Y ++++G+ L
Sbjct: 58 ALGGVPYAME-LALAVELLHSASLLHDDL--VDDAETRRGKEAAFRKYGNAVSVLSGDYL 114
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ +++ + ++ L+ LQ + + + I
Sbjct: 115 LSRLMALLAQTGRMELVAMFAETARQLSEAEVLQFQVAALHDYSLENY------ERIIDG 168
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT ++M ACE A++ A E+E L FG G FQ+ DD LD
Sbjct: 169 KTASVMRVACEGAAVLGDAPPAEREALARFGSFYGQAFQMRDDYLDLMGTAE 220
>gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae
3841]
gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 338
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + +R++ ++ + N + S GGK++R L ASLF+
Sbjct: 25 RADMERVNQLILSKAGSDVQMIPEVANHLISS-------GGKRLRPMLTLASASLFDYRG 77
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ ++E +H +L+HDD+ +D +RRGK T + + +++ G+ LL AF
Sbjct: 78 ENHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQAFR 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + LQ ++ E + + KT AL
Sbjct: 136 MMVDVGSLDALDVLSSAACVIAEGEVLQL------SVAKNMETTEDDYLSVIRAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G I+A ++ + L+ +G NLG+ FQL DD LD DL K
Sbjct: 190 AAAAEVGPIVAEVGRSGRNALKSYGMNLGLAFQLVDDALDYGGKAADLGK 239
>gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
Length = 371
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 51 IQQDLKDEVTKLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 103
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 104 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 161
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I G + + + I + I K K
Sbjct: 162 SQSFKLMVA-----SGSIKAMNVLAKASAIISAGEVVQLVKLNERRIITIDEYQQIVKSK 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L AC GAI+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 217 TAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 264
>gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Coenzyme Q biosynthesis protein 1;
AltName: Full=Decaprenyl pyrophosphate synthase;
AltName: Full=Trans-prenyltransferase; Short=TPT
gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
Length = 456
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 9/191 (4%)
Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
Y L GK+IR +V + + + A I + ++ +D RR
Sbjct: 177 YFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMI-HTASLVHDDVIDEASTRRDV 235
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
+++ Y AI+ G+ LL A ++S+ + S + L +Q G +
Sbjct: 236 ISINHSYTNKLAILCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGEFMQAKSNGVV 295
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + +C S AI++ A N FG+NLG+ FQ+
Sbjct: 296 SFDNYLQKTYLKTGSLITN--------SCRSAAILSGADSNIINISTEFGKNLGLAFQIV 347
Query: 225 DDLLDCEEDLP 235
DDLLD
Sbjct: 348 DDLLDYTGSAE 358
>gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
Length = 336
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 15/232 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + ++ ++T + + + N + S GGK++R L A L
Sbjct: 18 LVALVADDMAGVNTTILSRTGSEVTMIPEVANHLISS-------GGKRLRPMLTLAMAQL 70
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ AA+E +H +L+HDD+ +D +RRGK + + + +++ G+ LL
Sbjct: 71 AGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSARMLWGNEASVLVGDFLL 128
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF ++ + +I S ++ +Q ++ E + + + K
Sbjct: 129 GQAFRMMVEVGSLRALDILSSAAATIAEGEVMQL------AAAKNTATTEDEYLAVIRGK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
T L A E G ++A+ + E+ R FG NLGI FQL DD+LD K
Sbjct: 183 TAELFAAASEVGPVIANRPKAEQTASRSFGMNLGIAFQLIDDVLDYGGKAAK 234
>gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis
AJ13355]
Length = 302
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
++ ID LD LL D + +A+R AL GK+IR L+ A
Sbjct: 17 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+
Sbjct: 71 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130
Query: 127 AFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I+ R+ LS + + L D+ + M KT
Sbjct: 131 AFGVIADADGLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A+AS ++ L F +LG FQL DDL D D K
Sbjct: 191 STLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241
>gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
PR4]
gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus
erythropolis PR4]
Length = 379
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 72/246 (29%), Gaps = 25/246 (10%)
Query: 16 IDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT- 71
+ L D + S++ + + + + L GGK++R +
Sbjct: 32 FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91
Query: 72 --------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ I S P++ + + +
Sbjct: 92 DAEAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGE 151
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L A + + + +S + +LGGQ LDI +E + V
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 178 FMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + GA + A + R FG ++GI FQL DDLL D
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 234 ---LPK 236
K
Sbjct: 272 PSVTGK 277
>gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis]
Length = 379
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 72/246 (29%), Gaps = 25/246 (10%)
Query: 16 IDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT- 71
+ L D + S++ + + + + L GGK++R +
Sbjct: 32 FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91
Query: 72 --------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ I S P++ + + +
Sbjct: 92 GADAVIRACAALELVQACALVHDDIIDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHFGE 151
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L A + + + +S + +LGGQ LDI +E + V
Sbjct: 152 AVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRTEVLGGQFLDISNEARGDETV 211
Query: 178 FMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + GA + A + R FG ++GI FQL DDLL D
Sbjct: 212 EAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDLLGVFGD 271
Query: 234 ---LPK 236
K
Sbjct: 272 PSVTGK 277
>gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
Length = 288
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
+I++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPQINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A+++ + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAKYANSNDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
Length = 323
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 23/240 (9%)
Query: 4 GLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
L S ++ E+ ++ + L + + Y + GG K+IR +
Sbjct: 2 NLESIIELTTEDMSAVNEAILSQLNSDVALINQLGY--------YIVSGGGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 54 LAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T +F++++ + + S+ + LQ M ++ ++
Sbjct: 112 GDFIYTRSFQMMTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQ------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A + AI+A+A+ +++ L+ +G +G FQL DDLLD + D L K
Sbjct: 166 VIYSKTARLFEAAAHASAILANATPEQEKALQDYGRYIGTAFQLIDDLLDYDADNAQLGK 225
>gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu]
Length = 331
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPIASDMEQVNRVIRQSLASDVVLIN-QIAEYIIGA------GGKRLRPALLLFVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADATTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
M045]
Length = 384
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR LV A+ + A+R AA+E +H ++L+HDD+ MD RR +PT
Sbjct: 100 GKAIRPALVLTAAATLGGHRQAAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTAWT 157
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + AI+AG+ L A +++ ++L + Q + +
Sbjct: 158 VFGDSDAILAGDALQALAHRLLAEDPHPASAAAAARLASCVVELCAGQHADTALE-ERRP 216
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E + +V + + KTGAL+ AC GA+ A A E E L FG G+ FQL DD++
Sbjct: 217 EDVTLEEVLAMAEAKTGALLGCACAMGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVIG 276
Query: 230 CEEDLP 235
D
Sbjct: 277 IWGDPG 282
>gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
Length = 320
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+Q K ++ D + + + + D + + +Y + GGK++R LV A
Sbjct: 1 MQSFHKVVEADFDAVNRLIVAKLHSDV-DLVENIGQYIVDAGGKRLRPLLVLLAAKALGY 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + A IE IH +L+HDD+ +D +RRG+P+ + Q+ +++ G+ L + A
Sbjct: 60 QGQQHIELAAIIEFIHTATLLHDDV--VDVSALRRGRPSANAQWGNAPSVLVGDFLYSRA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++ I S ++ Q + + ++ + KT A
Sbjct: 118 FQMMVGVGNIDVMAIMSDTTNVISEGEVQQLVNAKDPDVTEQNYMA------VIHKKTAA 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE+GA++A S ++ ++ G +LG+ FQL DD LD +
Sbjct: 172 LFEAACETGAVIAGVSSEQRASIKQIGYHLGVAFQLVDDALDYHGNTE 219
>gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO]
gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO]
Length = 276
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 6/217 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
+ + L + + + + A+ Y+LL GK+IR L+ V
Sbjct: 4 EGFVKKLNEKMTRLINK--STMVEQAMAYSLLSAGKRIRPVLIKLICEDMGVQEDLIWNP 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E H SLIHDDLP +D+ +RRG+P+ H+ + AI+AG+GL+ AF +++
Sbjct: 62 AMAVELFHTASLIHDDLPQIDDSPLRRGRPSCHVVFGNDMAILAGDGLMLMAFCVLNQTP 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ S + L + ++ + D V + + KTGAL F
Sbjct: 122 ADPVSKSMLFDLFSKSTYDVL--IGEAMDVEFTGKEKDINDVIEMYRKKTGALFSFCFAI 179
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GAI+ E+L G G+ FQ+ DDL D
Sbjct: 180 GAILMKK-LEYLEKLINVGSTFGVWFQIVDDLKDVSG 215
>gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
Length = 378
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV
Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ + + L +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGSVEAGR---ATRRLTAASRALIDGQAQDISYEH 201
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 202 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLL 261
Query: 229 DCEEDLP 235
D
Sbjct: 262 GIWGDPE 268
>gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 382
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 25/248 (10%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIR---YALLGGKKIRSFLVTECASLFNVNHL 70
+ ++ +L L + + + +A + L GGK++R +
Sbjct: 31 QHVERVLAGYLDRRRTDVLGVDPAVAQAADALAGFVLGGGKRLRPTFAWWGWRGAGGDPG 90
Query: 71 TALRVGAAI-----ECIHCYSLIHDDLPS--------------MDNGYIRRGKPTVHIQY 111
+ E I +L+HDDL + ++
Sbjct: 91 SDHAQAVLTAVASLELIQACALVHDDLMDASSTRRGRPTVHVEFARTHAANDWSGPPARF 150
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI+ G+ +A ++ S + R+ L G + +
Sbjct: 151 GAAVAILVGDLAQVWADDMFHSAALPDGAHGRAAEPWRAMRTEVLAGQYLDVLAQASGDT 210
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ T + + + + GA +A A R +G ++G+ FQL DDLL
Sbjct: 211 AESTALQIDRFKTAAYTVERPLHLGAAIAGAEPQVVNAYRRYGADIGVAFQLRDDLLGVF 270
Query: 232 ED---LPK 236
D K
Sbjct: 271 GDPRVTGK 278
>gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9303]
gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9303]
Length = 323
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 ATVTELLQPVELDLETLLTDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 ADGDLSARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYRYDTGQSF------ATYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+LM + ++ +++ S ++ L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLMANSVQAAGVLSGESVEHQKSLHHFGRQLGLAFQVVDDILDFTGSEQQLGK 229
>gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a]
gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
subunit 2) [Frankia alni ACN14a]
Length = 296
Score = 91.8 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 64/200 (32%), Gaps = 13/200 (6%)
Query: 41 SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
R+ + GGK+ R +V A + + + AIE H +L HDD+
Sbjct: 3 ETSRHLVDAGGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDVMDEAPRR 62
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+ + D + + L
Sbjct: 63 RGAASANARWTNTVAI---------LTGDYLFARASDITADLGPAATRILARTIATLCEG 113
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ + + + KT +L+ + GA++A A + L FGE G+
Sbjct: 114 QIRETVGPAPDQDPVEHYLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFGELFGV 173
Query: 220 IFQLADDLLDCEE---DLPK 236
FQL+DD++D D K
Sbjct: 174 AFQLSDDIIDVASDPADSGK 193
>gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC
BAA-1498]
Length = 337
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E+ + ++ L + ++ M + ++ L+S+ GGK+IR + A +F
Sbjct: 24 KEDMECVNQ-LTISMAKSNVAMIPEISNYLISS------GGKRIRPMITLATAHMFGYQG 76
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ A+E +H +L+HDD+ +D +RRGK T I + +I+ G+ LL AF+
Sbjct: 77 DKHIKLATAVEFMHTATLLHDDV--VDESALRRGKSTARIIWGNQASILVGDFLLGQAFK 134
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + ++ S + +Q ++ + + I KT AL
Sbjct: 135 MMVDVGSLDALSVLSNAAAIIAEGEVMQL------SAAKNIETNVSDYLKIINAKTAALF 188
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E G I+A E+ L +G +LG+ FQL DD+LD L K
Sbjct: 189 SAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSSSAQYLGK 238
>gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 334
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 17/235 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
Q+ ++ L L + A+ Y + GGK++R L A +
Sbjct: 9 QKYGAEVEKALVRYL-------SIGLAEDFREAVLYQVKTGGKRLRPLLTLAAAEAVSGQ 61
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL A +E IH YSLI+DD+ +D G +RRG PTV + + AI+ G
Sbjct: 62 WRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIE 119
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-------LGGQMLDIQDEFIDETQVFMIQ 181
E + ++ + + + + +
Sbjct: 120 EAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTGAL+ A + G + + E FG G+ FQ+ DD+LD D K
Sbjct: 180 SLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKK 234
>gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium
BAC13K9BAC]
Length = 319
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 90/228 (39%), Gaps = 11/228 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L++ SK + + L+ L + T + + GGK+IR ++ + LF
Sbjct: 3 DLKQISKSLHSDLEKLNIFLKKATSTDVSLINNLSSHMIESGGKRIRPIILMLFSRLFKN 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ +D IR T + + + +A++ G+ L + A
Sbjct: 63 EKNVIEAGAILEL---IHAATLLHDDVVDQSDIRHNIKTANKLWGDDSAVLVGDFLYSRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
FE+I + I ++ ++ +Q M+ +++D + I +KTG
Sbjct: 120 FELIVDINKEKVYKILAETTNQISQGEVIQLMVKDKIIDNT------DKYLNIIYLKTGK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + + +A + + + FG+N GI +QL +D LD D
Sbjct: 174 LFEASAAVASELAGGN--YIDNAKSFGKNFGIAYQLRNDYLDYFGDES 219
>gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9313]
gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. MIT 9313]
Length = 323
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + E + ++ L+ LL S + H +A GGK++R +V + +
Sbjct: 2 ATVTELLQPVELDLETLLTDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + R E ++ +D RRG TVH +++ A++AG+ L
Sbjct: 62 ADGDLSARHRRLAEITEMIHTASLVHDDVVDEAATRRGVATVHSRFNHRVAVLAGDFLFA 121
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +++ + S++++ L QG+ KT
Sbjct: 122 QASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYRYDTGQSF------ATYLEKSYCKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+LM + ++ +++ S ++ L FG LG+ FQ+ DD+LD L K
Sbjct: 176 ASLMANSVQAAGVLSGESVEHQKLLHHFGRQLGLAFQVVDDILDFTGSEQQLGK 229
>gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
Length = 327
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 7 IQQDLKDEVTKLNDLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + + N+ ++ ++ +Q + + I + + I K K
Sbjct: 118 SQSFKLMVASGSIKAMNVLAKASAIISVGEVIQLVKL-----NERRIITIEEYYQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L +CE GAI+A + + +R FG LG IFQ+ DDLLD
Sbjct: 173 TAELFGASCEVGAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLDYLG 220
>gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
NGR234]
gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Geranyltranstransferase
gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
NGR234]
Length = 332
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q +KR++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 36 WMQNGAKRVEQALARLLCAED-----HGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE +H +L+HDDLP+MD+ +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 91 TPAHILDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 150
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S + I L+ + L + + ++ ++ + +MK G
Sbjct: 151 AFLTLASLDAPGDNRIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKCG 210
Query: 187 ALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ + GA+ A A L + G+ Q+ DD+LD D
Sbjct: 211 ALVRASVRMGALCAIAEDAADATLYCALDHYSACFGLALQVVDDILDATADTA 263
>gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis]
Length = 418
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 21/244 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECAS 63
L + + L L S + ++ + +A + GGK++R LV A
Sbjct: 95 SLINVFEAVAGDLQTLNQNLRSIVGAENPVLMSAADQIFGAGGKRMRPALVFLVSRATAE 154
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + LT A ++ +D +RRGK TVH Y A++AG+ +
Sbjct: 155 IVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKQTVHQLYGTRVAVLAGDFM 214
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + + SQ++ Q + D ++ + +
Sbjct: 215 FAQSSWYLANLENIEVIKLISQVIKDFASGEIKQA------SSLFDCDVELEEYLIKSYY 268
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------E 232
KT +L+ + + AI + + E++ +G+NLG+ FQ+ DD+LD
Sbjct: 269 KTASLIAASTKGAAIFSGVDSSVAEQMYEYGKNLGLSFQVVDDVLDFTQSAEQLGKPAGS 328
Query: 233 DLPK 236
DL K
Sbjct: 329 DLAK 332
>gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103]
gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103]
Length = 311
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
++ ID LD LL D + +A+R AL GK+IR L+ A
Sbjct: 26 EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 79
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V+H L + A+E +H SLI DD+P MD+ +RRG+PT+H Y E AI+A LL+
Sbjct: 80 VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 139
Query: 127 AFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I+ R+ LS + + L D+ + M KT
Sbjct: 140 AFGVIADADGLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFKT 199
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A+AS ++ L F +LG FQL DDL D D K
Sbjct: 200 STLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 250
>gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
Length = 334
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 16/241 (6%)
Query: 4 GLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +KL Q+ I+ L+ L + + L GGK++R L A
Sbjct: 2 DIVTKLHQKYGGAIERALEHYLSIDVA--PDFREEVLYQ----IKTGGKRLRPLLTLAIA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ AL +E IH YSLI+DD+ +D G +RRG PTV + + AI+ G
Sbjct: 56 EAVSGQWEPALPAATIVELIHNYSLIYDDI--IDRGDVRRGMPTVRKAFGDNAAILIGIW 113
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-------LGGQMLDIQDEFIDET 175
E + L ++ + + + +
Sbjct: 114 YREAIEEAVLDTPKPLVFAKEVAKVIKAIDEGERLDILFEYAGRDDPYFIKARKRDVTVE 173
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTG L+ A + G + S+ E FG N GI FQ+ DD+LD D
Sbjct: 174 DYIHMVSLKTGVLIAAAAKWGVLSVSDSKELAETAWNFGLNAGIAFQIIDDVLDIYGDPK 233
Query: 236 K 236
K
Sbjct: 234 K 234
>gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
Length = 304
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 11 ENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E K I+ L ++L + ++T RY + GGK++R + + +
Sbjct: 2 EILKAIEDRLVEELNPKVRLVLETG---------RYIVESGGKRLRPLFTLLVSGMCGGD 52
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL +G A+E IH SL+HDD+ +D RRG+ + ++ + A++ G+ + +
Sbjct: 53 PSKALPLGVALEYIHVASLLHDDV--VDRAKTRRGRESANLVFGNGVAVLTGDYMYAKSL 110
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ S+ + S +++ + L+ G ++ + F I KTG L
Sbjct: 111 HLFSTYGNMEMIRLVSGVVMDMAEGQVLEISKVGDIISE-------EEYFQIIDGKTGVL 163
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GA+ + L G LG FQL DD LD E D L K
Sbjct: 164 FGACFGVGAMSGECG--DWRELYEAGLRLGRAFQLIDDALDYEGDPKVLGK 212
>gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 323
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
+E K I L + + + ++ L +A++Y + GK+IR LV A L
Sbjct: 3 DFEEGKKVISNELKIFNDKFSLSFFAE-DELLHNALQYLMPQKGKQIRPILVILGAKLCG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ AA E +H SLIHDD+ +DN RR KP+++ +D T+++ G+
Sbjct: 62 EVTDDTYLIAAAYELLHSASLIHDDV--IDNSLQRRNKPSLNKIFDNKTSVLVGD----- 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+++ + + + + L E + + + K KT
Sbjct: 115 --YLMTKSFNYIYHTYKMEQIGLLQKLSIDIIRGELLQQQYSHSIPKEKEYYSVIKNKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
AL ++GA+ A+ + + + + GENLG+ FQ+ DD+ D + L K
Sbjct: 173 ALFATCLQAGALSANGTTQQLDDMYSIGENLGMCFQIKDDIFDYSANASLGK 224
>gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
lyrata]
gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 10/232 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECAS 63
L+ + + L L S + ++ + +A + GGK++R LV A
Sbjct: 94 SLENLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAE 153
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + LT ++ +D +RRGK TVH + A++AG+ +
Sbjct: 154 LAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFM 213
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +++ + + SQ++ Q + D ++ +
Sbjct: 214 FAQASWYLANLENLQVIKLISQVIKDFASGEIKQA------SSLFDCDVELDDYLLKSYY 267
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ + + AI + E++ FG+NLG+ FQ+ DD+LD +
Sbjct: 268 KTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDDILDFTQSTE 319
>gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis]
gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis]
Length = 420
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 24/244 (9%)
Query: 11 ENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL--- 64
+ + DDL L Q + N L+SA GGK++R LV A
Sbjct: 97 SVKNLFEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAE 156
Query: 65 -FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ LT A ++ +D +RRGK TVH Y AI+AG+ +
Sbjct: 157 VIGLKELTIKHRRLAEIIEMIHTASLIHDDVLDESNMRRGKETVHQLYGTRVAILAGDFM 216
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + + SQ++ Q + D ++ + +
Sbjct: 217 FAQSSWYLANLENIEVIKLISQVIKDFASGEIKQA------SSLFDCDVELEEYLIKSYY 270
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------E 232
KT +L+ + + AI + ++ E++ +G+NLG+ FQ+ DD+LD
Sbjct: 271 KTASLIAASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGS 330
Query: 233 DLPK 236
DL K
Sbjct: 331 DLAK 334
>gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4]
gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus
273-4]
Length = 349
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 83/224 (37%), Gaps = 12/224 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNHLT 71
I +I+ D + N ++ + GGK++R + CA +FN
Sbjct: 30 IQSIVADDFEIMDKQVFGSLNSKVQLVMNVSQHVINAGGKRMRPLITLLCARMFNDEPSQ 89
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
AAI ++ +D RRGK T + +D TA++ G+ L+ AF ++
Sbjct: 90 QAMHLAAITE-MLHTATLVHDDVIDESGQRRGKATANATWDNATAVLVGDYLIARAFNLL 148
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + S + LQ + E I KT L
Sbjct: 149 VGFQSLPLLQVFSDGTCDIAEGEVLQLQHQ------HNPEATEQDYLNIIDGKTSRLFMM 202
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + AI+ + L FG++ G FQ+ DD+LD D
Sbjct: 203 ATQGAAILQGQ-IQHLQALADFGQHFGNAFQIIDDVLDYSGDSE 245
>gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1]
gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1]
gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
Length = 324
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 87/234 (37%), Gaps = 13/234 (5%)
Query: 8 KLQENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
KL I+ L + + S + + + + Y L+GGK +R L A F
Sbjct: 3 KLSSIYAPINEGLKGVEDEFKLVSESRKKSFPEMAEMLDYILVGGKVLRPALSMLSAMCF 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + + E +H +L+HDD + R ++ +L
Sbjct: 63 GAGIKKVLPLATSSEMLHIATLVHDDAIDKADTRRGRRTVNAVWGLEKA--------ILL 114
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
F + +T + + L + Q + KT
Sbjct: 115 GDFLFAHAAETAAETGNMGIVTLFSQTLQIIASGELKQAYASFNPDQSYENYLERISGKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AL A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD D+ K
Sbjct: 175 AALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228
>gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
Length = 323
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKAIQTLTANDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 LLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++++ + + S+ + + Q M + E
Sbjct: 111 VGDFIYTRSFQMMTTLGSLKILELMSEAVNVIAEGEVQQLMNC------NNPDTTEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GAI++ +S + ++ +G+ LG FQL DD++D D K+
Sbjct: 165 QVIYSKTARLFEAATQIGAILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD-GKE 222
>gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
Length = 326
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 14/233 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
KL E + I+ L++ + + T +D L A+ + GK +R LV A F
Sbjct: 5 KLAEIRRPIEAELNEY-ARLFAESLTHEDDFLGQALSHMRRRNGKMMRPILVLLAAKAFA 63
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
LR +E +H SLIHDD+ + A+ +
Sbjct: 64 PISEKTLRSAVTLELLHTASLIHDDVVDDSGERRGQASVN---------ALFGNKVAVLV 114
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKT 185
++S Q +++ + G + L + + + F + + KT
Sbjct: 115 GDYLLSKSLHQAYLTDDLRIVEIVARLGGTLAEGEVKQLANIRQSVATEEAYFDVIRHKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PK 236
AL GAI A + E+ FGE +G+ FQ+ DD+ D +D K
Sbjct: 175 AALFAACTRLGAISADCAPATVEQAATFGEIIGLCFQIRDDIFDYYDDETIGK 227
>gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 345
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 17/224 (7%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA 72
+R+ L ++L + +L + L G GK +R LV L
Sbjct: 8 ERVQKRLKEVL--------SGGQAQLEEVLMGPLQGLGKMLRPRLVLLSRGLLGPIEDLT 59
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ V A+ECIH SLIHDD+ +D +RRG PT++ Y A++ G+ AF +++
Sbjct: 60 VDVAVAVECIHNASLIHDDI--IDAAVLRRGAPTINHLYGPKIAVLVGDHYFAAAFGLLT 117
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ S + + Q + +D++ KT +L A
Sbjct: 118 RHNLKHIMRELSDAIQDMCKGEIYQDLNLFNPYITEDDYWTS------IFGKTASLFSAA 171
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G + S E + FG LG +Q+ADD+ D D K
Sbjct: 172 CRCGVMAGGGSAREVYLMGKFGRELGYAYQVADDINDLIGDEEK 215
>gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium
aurimucosum ATCC 700975]
Length = 363
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 79/257 (30%), Gaps = 25/257 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFL 57
+PS L E + L L + + + + +AI Y L GGK+IR
Sbjct: 3 TPQIPS-LDEIPAAVREELALFLDRQRDAIASIGAP-VTNAISYLESFVLDGGKRIRPLY 60
Query: 58 VTE----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG---------- 103
L A+ A + D + R
Sbjct: 61 AWAGFIGARGLEGTESPQAMLRAATSLEFIQACALIHDDIVDASDTRRGNPTVHRGVAAR 120
Query: 104 -----KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+ + AI+ G+ L +A +++ + R++ + G
Sbjct: 121 HRELGFHGDADFFGQSLAILVGDMALVWAEDMLQDSGLSPEALARARAPWRAMRREVIGG 180
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ L+ + + + + GA +A A + R +G+++G
Sbjct: 181 QMLDICLEAEGSEDATLADSVNRFKTAAYTIERPLHLGAAIAGAPEKLVAAFRGYGQDIG 240
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQL DDLL D
Sbjct: 241 VAFQLRDDLLGVFGDPA 257
>gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
Length = 326
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 17/230 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L L+E I+ + ++ ++ ++A+ ++ GGK +R V A
Sbjct: 11 PELQKDLKEVLVTIEKNIK---------IRDKNVAENINAMIHS--GGKLLRPAFVLLTA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A + +D+ +RRG PT+H ++ A+ G+
Sbjct: 60 QA-GPEYNVDRSIAVASALEVLHMATLIHDDVIDDADMRRGVPTIHSKFGRKYAVYTGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+I+S+ +++ + + L M D+ +
Sbjct: 119 LFCVCFKILSAHADSVENIDFNSKNIEKILMGELNQMK-----DLYHMNVTVKDYLTRIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L +C SGA+ + A + + G +G+ FQ+ DD+LD
Sbjct: 174 GKTAQLFALSCYSGAVSSKAPRKTLYTAKNAGHFIGMAFQIIDDILDYTS 223
>gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
Length = 325
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L + I + LD + + + + L + + GK++R L+ A F
Sbjct: 3 YLTLIKQPISSELDTFINLFNDSL-SHADGLLGQVLEHIRKRAGKRMRPMLILLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
R +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+
Sbjct: 62 EVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S Q +QL +L++ LQ ++ + + + KT
Sbjct: 120 ALLNVSLTGDQAIITYLAQLGRTLSNGEILQLTNIRNQEISEEVYYQ------VIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL GA+ A + + E R FG+NLGIIFQ+ DD+ D D
Sbjct: 174 ALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFDYY-DSE 221
>gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1]
Length = 324
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSRASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1]
Length = 324
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSRASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
Length = 365
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 72 GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T +L + I Q +
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGTVEAGRATRRLTSATRKLIDGQ---AQDISYEH 186
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 187 RERVTVAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 246
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 247 GIWGDPDATGKQ 258
>gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
ATCC 43541]
gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
ATCC 43541]
Length = 349
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 88/230 (38%), Gaps = 13/230 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+N + +Q + + ++ L + + + + + S GGK++R L
Sbjct: 25 LNNDMFDVIQADLEMLELTLTEAIASETALVTDIGTHLVSS-------GGKRLRPALFLV 77
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + A + A ++ +D RRG T + ++ AI+ G
Sbjct: 78 AAR-GGTSFDPARAMPIAAALELVHTASLVHDDVIDEADTRRGAATANAKWGNQIAILTG 136
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + AF++I+ + L Q + DE+ +
Sbjct: 137 DYIFARAFKLIAEKGYDSSI-----YVKLAQLVCTLSEGEILQDHTVYQVPKDESAYYER 191
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ KT + CE GA++ S ++ R+ +G+ LG+ FQ+ DDLLD
Sbjct: 192 IRKKTADFLEICCELGAMIGGMSADDTARMAQYGQALGMAFQITDDLLDF 241
>gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 364
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 75/247 (30%), Gaps = 17/247 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTAS--------------HMQTQHNDRLLSAIRYAL 47
+ + S I+ L + + S + ++ Y +
Sbjct: 9 SEEFADFIGSVSASINKALWEYMSNERSDRNIKRLLGRGGFEYDSEAIQKSIIEPSWYLV 68
Query: 48 L-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK+IR + + + + E +H +L+HDD+
Sbjct: 69 EKGGKRIRPIITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIEDGSETRRGAQSVY 128
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
D + + S + IGL
Sbjct: 129 KKYGMDIALNLGDFLFFFPIKVLLDSKKLDDAVKYRILKAHEKHMIRIGLGQATDIAWHR 188
Query: 167 IQDEFIDETQVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ T+ + KTG L+ FA E GAI+ A + ERL F +G+ FQ+
Sbjct: 189 ALTDIGKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFASMIGVAFQIE 248
Query: 225 DDLLDCE 231
DD+L+
Sbjct: 249 DDILNIT 255
>gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 98/232 (42%), Gaps = 10/232 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS---- 63
+ + + ++ + + + ++ L +A + GGK++R LV A
Sbjct: 2 DIDAITAPVMADMEQMRMNLRDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARSTAQ 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L ++ +T + A ++ +D+ RRG T+H Y AI+AG+ L
Sbjct: 62 LMDMPEITDRQRRLAEITEMIHTASLVHDDVLDDCDTRRGAQTIHTLYGTRVAILAGDFL 121
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + SQ++ Q + +++++
Sbjct: 122 FAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEGYLEKSHN------ 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C+S A+ + S++ K + +G++LG+ FQ+ DD+LD +
Sbjct: 176 KTASLIAASCKSAAVFSEVSEDIKVDMYEYGKHLGLAFQVVDDILDFTQTEE 227
>gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071]
gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071]
gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071]
Length = 359
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 81/223 (36%), Gaps = 12/223 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-VG 76
T DD L +H + L +A GK +R+ L F + R
Sbjct: 44 TRFDDRLRPMVAHHFGWPSSDLPTA----TTSGKMVRATLTVLTGECFTTDAEAISRVTA 99
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A ++ MD RRG+P V +Y AI+ G+ LL A ++ P
Sbjct: 100 AGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWHEYGIPAAILTGDLLLAQAPLMLDGPWA 159
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
R G + + + KTGAL+ ACE G
Sbjct: 160 ADPRATRLLAEAVARLAAG----QMADLSLEGRPEASPDEALAVAADKTGALLACACELG 215
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A++A AS+ R FG LG+ FQ+ADD+L D K
Sbjct: 216 ALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGDPRRTGK 258
>gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays]
gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays]
Length = 407
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 22/225 (9%)
Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIH 83
S + ++ + +A + GGK++R LV A L + LT A
Sbjct: 103 KSLVGAENPVLVSAAEQIFSAGGKRLRPALVFLVSRATAELAALPELTTEHRRLAEIIEM 162
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++ +D+ +RRGK T+H Y A++AG+ + + +++ + +
Sbjct: 163 IHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLI 222
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
SQ++ Q + D + + KT +L+ + S AI +
Sbjct: 223 SQVIKDFASGEIKQA------STLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGVG 276
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE------------EDLPK 236
E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 277 SGVCEQMYEYGRNLGLAFQVVDDILDLTQSAEQLGKPAAGSDLAK 321
>gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 367
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 73/249 (29%), Gaps = 26/249 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
R+D L L + + + L +A+R L GGK +R +
Sbjct: 14 RTRVDAALSAFLDSQGAALIAMSPELAPLPTALREFLDGGKLMRPGFCYWGWRGVLGDSA 73
Query: 71 TALRV----------------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE- 113
TA + S +P++ + + DE
Sbjct: 74 TAQEEEGIVHAAASLELLQASALIHDDYMDDSDTRRGMPAIHRRFAAAHREAAWEGSDER 133
Query: 114 ---VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
AI+ G+ LT+ E+ + + ++ + + G +
Sbjct: 134 FGAAAAILLGDVCLTWCDEMFAGNGLPAERTAAARRYFDVMRTEVMAGQYLDVLAQAHGL 193
Query: 171 FIDETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
E Q + + GA++A ++ +G LG FQL DD
Sbjct: 194 DEPERAAQRAQTVIRFKSAKYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLRDD 253
Query: 227 LLDCEEDLP 235
+L D
Sbjct: 254 VLGVFGDPA 262
>gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 326
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 83/228 (36%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEKNVKDLIH-------AGGKLLRPAFALLSAQA-GPE 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 FDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + AS+ + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDAG 227
>gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
Length = 324
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSKASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium
acnes KPA171202]
gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium
acnes KPA171202]
gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3]
gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2]
gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1]
gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium
acnes 266]
Length = 324
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSKASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus
jensenii SJ-7A-US]
gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus
jensenii SJ-7A-US]
gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
Length = 325
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ +++ +L + +++ L GGK +R LV A
Sbjct: 13 IANELAQVNELLKQTMHAPNKNLE----SALKEMAD---NGGKYLRPSLVLLAAHAVGKT 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +++ AIE +H +LIHDD+ +D+ RRGKP++ + + A+ AG+ L T F
Sbjct: 66 NKQIIQIATAIETLHMATLIHDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + +Q M + + GQM + K KT L
Sbjct: 124 DLMLDVNEPEYLRLNAQTMRQILNGE------LGQMNQRFNLEQTFDDYLADIKGKTATL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A E GA A + + + L F E+LGI FQ+ DD+LD
Sbjct: 178 FRLAAEEGAHFAGGNLEQTQILANFAEDLGIAFQIIDDILDYRG 221
>gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured
proteobacterium eBACred25D05]
Length = 308
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
KRI+ + + + +L AI+Y++ GG +IR ++ A +
Sbjct: 23 KRIEAAVRRGVGVFGKKLP--VPQKLDDAIQYSVFPGGARIRPTILLSVAVACGDDNPSL 80
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A AA+E IHC SL+HDDLP DN RRGKP+VH +Y E TA++ G+ L+ AF +I
Sbjct: 81 ANASAAALEMIHCASLVHDDLPCFDNAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVI 140
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + + G G E + + KTGAL
Sbjct: 141 ARA----ADKDAVRAAKLIALLSKYTGFPKGICAGQAWEAEISVDLSAYHQTKTGALFIA 196
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A + GA A G +G FQ+ADDLLD
Sbjct: 197 ATQMGAASAGHDPE---PWFELGARIGEAFQVADDLLDV 232
>gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10]
Length = 289
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 5/220 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + N ++ + Y++ GGK++R L + +R+
Sbjct: 14 VIDDYLAKHLA--SEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQ 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + +G Q + + + + ++ +KTG L+ + E
Sbjct: 132 SAQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKF-INQMEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A+ A AS E+ +L F + G +Q+ DDL+D E K
Sbjct: 191 AVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEK 230
>gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
Length = 325
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L + I + LD + + + + L + + GK++R L+ A F
Sbjct: 3 YLTLIKQPISSELDTFINLFNDSL-SHADGLLGQVLEHIRKRAGKRMRPMLILLMAKNFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
R +E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+ +L+
Sbjct: 62 EVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S Q +QL +L++ LQ ++ + + + KT
Sbjct: 120 ALLNVSLTGDQAIITYLAQLGRTLSNGEILQLTNIRNQEISEEVYYQ------VIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL GA+ A + + E R FG+NLGIIFQ+ DD+ D D
Sbjct: 174 ALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFDYY-DSE 221
>gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
Length = 331
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+++ ++ + L + + + S GGK+IR + A ++
Sbjct: 22 MNQVNKLITEQLSSDVALINQLGFYIINS-------GGKRIRPLITVLAAKALGIHDQNT 74
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L T +F++++
Sbjct: 75 TKLAAIIEFIHTATLLHDDV--VDDSDLRRGKKTANAVFGSAASVLVGDFLYTRSFQMMT 132
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ +I S + LQ M + + I KT L A
Sbjct: 133 QLRNLKVMDILSSATNIIAEGEVLQLMNCNDPDTTE------KKYMDIIYFKTAKLFEAA 186
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A++ S+ + L +G+ LG FQL DD++D D
Sbjct: 187 TQLVAVLGEQSEEIETALLNYGKYLGTAFQLTDDVMDYNSDAS 229
>gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana]
Length = 379
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 10/232 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECAS 63
L+ + + L L S + ++ + +A + GGK++R LV A
Sbjct: 56 SLETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAE 115
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + LT ++ +D +RRG+ TVH + A++AG+ +
Sbjct: 116 LAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFM 175
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +++ + + SQ++ Q D+++ ++
Sbjct: 176 FAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKS------YY 229
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ + + AI + E++ FG+NLG+ FQ+ DD+LD +
Sbjct: 230 KTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTE 281
>gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565]
gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565]
Length = 323
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 17/228 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + + ++ ++ L S + Y + GGK++R L A
Sbjct: 5 TIRALCAADMTAVNELILARLQSDVSLINQLGF--------YIVSAGGKRMRPMLTVMAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 57 RALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETANAMFGNAASVLVGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F++++ I S ++ LQ M + +
Sbjct: 115 LYSRSFQMMAELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTE------ESYMTVIY 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L A A++ H + ++ + +G+ LG FQ+ DD++D
Sbjct: 169 CKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDY 216
>gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1]
Length = 331
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 95/241 (39%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + ++++ + + + Y + GG K+IR +
Sbjct: 9 MDMHAIQALTDADMQKVNQAILAQINSDVPMVNQLGF--------YIVQGGGKRIRPLIA 60
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A +E IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 61 VLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATANSAFGNAASVL 118
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ I + L Q M +
Sbjct: 119 VGDFIYTRAFQLVAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTE------ESYM 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A +S AI+A A ++ + + +G LG FQL DD+LD + L
Sbjct: 173 RVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAAALG 232
Query: 236 K 236
K
Sbjct: 233 K 233
>gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
Length = 293
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 134/230 (58%), Gaps = 10/230 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ +++ +LDDL+ Q+ L +++Y++ GGK++R L+ + N +
Sbjct: 7 NDLISQVNQVLDDLIPQSK------LGTNLEKSMQYSINAGGKRVRPLLLLLTLDMLNKD 60
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ L AA+E IH YSLIHDDLP+MD+ RRGK T H + E A++AG+ LLT AF
Sbjct: 61 YQLGLATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEWKAVLAGDALLTKAF 120
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTG 186
++IS TQL ++I+ +L+ L G GM+GGQ + + + +D + + I + KTG
Sbjct: 121 DVIS-NDTQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQSETQAVDISTLEQIHRAKTG 179
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ FA + +A +++ E L F ++LG++FQ+ DDLLD + K
Sbjct: 180 ALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDDLLDVYGEESK 229
>gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
Length = 325
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 20/236 (8%)
Query: 1 MNGGLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56
M+ + Q +++ ++ L + ++ Y + GGK+IR
Sbjct: 1 MSMDIKHIQQISNTEMAKVNALISKQLTSDVALIKQLGF--------YIVNSGGKRIRPL 52
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ A NV+ ++ A IE +H +L+HDD+ +D +RRGK T + + +
Sbjct: 53 ITILAAKALNVHSEKITKLAAIIEFVHTATLLHDDV--VDESDLRRGKKTANALFGNAAS 110
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L T +F+++S + ++ S+ + LQ M + ++D
Sbjct: 111 VLVGDFLYTRSFQMMSELQNLKVMDVLSRATNIIAEGEVLQLMNCNDANISEKLYMD--- 167
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KT L A + ++A + + L +G+ LG FQL DD++D
Sbjct: 168 ---IIYYKTAKLFEAATQLVGVLAEQTPEIELALLNYGKYLGTAFQLTDDVMDYTS 220
>gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium]
gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase
gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium]
Length = 323
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 19/235 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
++E+ I+ L+ L+ +N L +A ++ L+ KKIR +V A
Sbjct: 9 QSVKEDLLNIEQTLNKLI--------KVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI 60
Query: 66 NVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ N E ++ +D IRRG +V+ + A+ AG+ L
Sbjct: 61 DKNKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLF 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +++ S+++ L Q + + K
Sbjct: 121 AQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSII------KYLEKSFNK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T +L+ +C+S +++ Q+ + +G+NLG+ FQ+ DD+LD L K
Sbjct: 175 TASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGK 229
>gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
Length = 319
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ +++ +L + +++ L GGK +R LV A
Sbjct: 7 IANELAQVNELLKQTMHAPNKNLE----SALKEMAD---NGGKYLRPSLVLLAAHAVGKT 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +++ AIE +H +LIHDD+ +D+ RRGKP++ + + A+ AG+ L T F
Sbjct: 60 NKQIIQIATAIETLHMATLIHDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFF 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + +Q M + + GQM + K KT L
Sbjct: 118 DLMLDVNEPEYLRLNAQTMRQILNGE------LGQMNQRFNLEQTFDDYLADIKGKTATL 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A E GA A + + + L F E+LGI FQ+ DD+LD
Sbjct: 172 FRLAAEEGAHFAGGNLEQTQILANFAEDLGIAFQIIDDILDYRG 215
>gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK IR LV A + TAL A+E +H +SL+HDD+ MD RR + T
Sbjct: 60 GGKAIRPALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDV--MDGDLTRRHRATAW 117
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LLT A ++++ ++ + T + L + +
Sbjct: 118 RVFGNGPAILAGDALLTLASDVLA---ASGHPAAQAGVRTLNTAVLELVDGQVADLAFEK 174
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + + KTGAL+ AC GA S + E LR FGE LG+ FQ DDLL
Sbjct: 175 RDDVGVAECQTMVAGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGLAFQHVDDLL 234
Query: 229 DCEEDLP 235
D
Sbjct: 235 GIWGDPE 241
>gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
Length = 325
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
L + I L+D + + + L A+ + GK++R L+ A FN
Sbjct: 3 YLSLIQQPIVDELNDF-DYLYNESLSHGDGLLSQALSHIRQRKGKRMRPMLILLIAKNFN 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A +E +H SL+HDD+ +D RRG+ +V+ YD A++ G+ +L+
Sbjct: 62 GVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYDNKVAVLVGDYILST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +S ++ + L +L++ LQ ++ + + K KT
Sbjct: 120 ALLQVSFTHSEAIIQNLANLGRTLSNGEILQLSNIQNQDISEEVYYQ------VIKQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL GA A+ E E R FG+ LGIIFQ+ DD+ D E ++ K
Sbjct: 174 ALFESCAVIGAQAGKATPEEVEAAREFGQTLGIIFQIRDDIFDYFESKEIGK 225
>gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis]
Length = 332
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 7/231 (3%)
Query: 8 KLQENSKRIDTI--LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+ ++ D L L TA+ DRL + RYA+ GK +R L+ E A+
Sbjct: 5 YIDSRTEEFDPAPALRHYLAGTAA----GDGDRLDAVTRYAVQPPGKLVRPVLLVESAAA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A+E +H +L+HDD+ D R DE L
Sbjct: 61 VGADPADLVPIAVALEYLHVATLVHDDIIDGDLLRRGRPTVHARYGRDEAIVAGDALLLD 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T+ ++ + + + + L + D + + + +K
Sbjct: 121 TFRTLTEAAELGFPPAAVLEAVRIVAVAGLDLCRGQAMEAGLAGDLYCGMARYRTMAGLK 180
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL AC +GA++ S E LR F ++LG FQ+ DDLL D
Sbjct: 181 TGALFIAACAAGAVLGGGSGEEVRALRSFADHLGCAFQMRDDLLPYLADTS 231
>gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 355
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 20/217 (9%)
Query: 39 LLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ +A+R + L GGK++R F + + V AA + + +D
Sbjct: 40 VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDASPIVVAAASLELFHAFALI-HDDIVDR 98
Query: 98 GYIRRGKPTVHIQYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
RRG PT+H + E G ++ ++ Q+
Sbjct: 99 SDRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPERL 158
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-------MKTGALMCFACESGAIMAHA 202
++ L M + + + + + + GA +A A
Sbjct: 159 RRGHVLLARMRSEVIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALAGA 218
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ E L FG+ LG FQL DDLL D K
Sbjct: 219 APEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGK 255
>gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 355
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 20/217 (9%)
Query: 39 LLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ +A+R + L GGK++R F + V AA + + +D
Sbjct: 40 VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDAAPIVVAAASLELFHAFALI-HDDIVDR 98
Query: 98 GYIRRGKPTVHIQYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
RRG PT+H + E + G ++ ++ Q+
Sbjct: 99 SDRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPERL 158
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-------MKTGALMCFACESGAIMAHA 202
++ L M + + + + + + GA +A A
Sbjct: 159 RRGHVLLARMRSEVIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIGAALAGA 218
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ E L FG+ LG FQL DDLL D K
Sbjct: 219 APEEVAALAGFGDPLGDAFQLRDDLLGVFGDPSVTGK 255
>gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
Length = 305
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 102/207 (49%), Positives = 139/207 (67%), Gaps = 6/207 (2%)
Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
L+ A+R+ +L GGK++R FLV E A + ALRV AA+ECIHCYSL+HDDLP+
Sbjct: 40 PAHLILAMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVHDDLPA 99
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
MD+ +RRG+PTVHI +DE TAI+AG+ LLT AF++IS+P+T L + R +L+ +L+
Sbjct: 100 MDDDDLRRGQPTVHIAFDEATAILAGDALLTLAFDVISAPETDLPADARLRLVNALSRAA 159
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRC 212
G+ GM+GGQ LD+ E + + ++ Q MKTGAL+ FAC +GAI A R+
Sbjct: 160 GVGGMVGGQALDLAAERVSPDEAGIVKLQAMKTGALLRFACAAGAIAAGCDDAIVARVTR 219
Query: 213 FGENLGIIFQLADDLLDCEED---LPK 236
FGE +G+ FQLADDLLD D L K
Sbjct: 220 FGEIIGLAFQLADDLLDVTSDAATLGK 246
>gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
Length = 306
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 9/223 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
L + + +R++ L+ + + L A+RYA+LG GK++R LV
Sbjct: 15 FDLSAWSAQALRRVEQALE-------TWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + ALR ++E IH YSL+HDD+P MDN +RRGKPTVH+Q+ + A++AG+
Sbjct: 68 AEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGD 127
Query: 122 GLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L AFE+++ R +L+ L + E ++ +
Sbjct: 128 ALQALAFELLTPEDDVPEAMQARLCRLLARAAGADGMAGGQAIDLASVGVALSEDELRRM 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
++KTGAL+ + GA + + L +G LG+ FQ+
Sbjct: 188 HRLKTGALLQSSVLMGAACGAVAPAAWDALSRYGAALGLAFQV 230
>gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 368
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +++ + I+ L +++ + L A GGK++R L A
Sbjct: 10 PQLEARIVPALQAIEDRLMEVVTSADETINPPT-SHLAEA------GGKRLRPVLALLTA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ A + + MD +RRG P+ + AI+ G+
Sbjct: 63 QLGDPALAAGEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L+ A +++++ + + + L +
Sbjct: 123 VLVARASQLVAALGPEAVMAHAKTFERLCMGQLH-------ETLPRPSGTDPVDHYIQVL 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA++ A + + FGE +G+ FQLADD++D D
Sbjct: 176 ADKTGSLIAVSARYGAMLTGAGVRTERIVEEFGEKIGVAFQLADDVIDLMSDSA 229
>gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463]
Length = 257
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L+ A + + + + ++IE +H +LI ++D+ +RRG ++
Sbjct: 5 GGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLI--HDDTIDDSDLRRGNISIQ 62
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
++ + A+ AG+ L T F+++ T+ + +R+ +S N GQM +
Sbjct: 63 AEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSHILNG-----ELGQMAERF 117
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ T K KT AL A E GA A + + L FGENLGI FQ+ DDLL
Sbjct: 118 NLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLL 177
Query: 229 DCEE 232
D
Sbjct: 178 DYTG 181
>gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
Length = 288
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
+I++ L + L T ++ + + Y+ L GGK++R L + +
Sbjct: 10 YLPQINSFLKEQLEC------TINDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL +
Sbjct: 64 EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + G Q M ++ + + + ++ +KTG L+
Sbjct: 124 WIAEASNSYELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETF-IDKMEFLKTGCLI 182
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + A A +S + L F E G +Q+ DD++D + KK
Sbjct: 183 VASVQMAAEYASSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233
>gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1]
gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1]
Length = 296
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAI 79
L +++ H + L GGK+ R L+ S F +HL + A+
Sbjct: 19 YLKHAKPKLKSFHPTFEQAFWEMLLNGGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALAL 78
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E +H YSLIHDDLP MDN +RR PT+H+ Y A + G+GL TYAFE++SS +
Sbjct: 79 EVLHTYSLIHDDLPCMDNAPLRRYHPTLHVSYGVTVATLVGDGLNTYAFELLSSARLPNA 138
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ L+ + + + + + Q+ ++ +KT L+ + + GA++
Sbjct: 139 LKVSLISTLAHCGGVFGMVLGQAIDCYFEHKPLLREQLEILHTLKTAKLIAASLKMGALI 198
Query: 200 AHA----SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
A N L FG LG+ FQ+ DD++D E+ K
Sbjct: 199 AKKYARTPTNLPTTLFNFGLKLGLFFQVRDDIIDRTKSPEESGK 242
>gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 345
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 8/230 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++++ ++ L H+ ++ D L A GK IR LV +
Sbjct: 13 IQAEMRAAFPVVEGRLSRFYAMQEYHLGWRNED-LTPA---DADPGKLIRPQLVLLACAA 68
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ AL + A I+ +H +SLIHDD+ +RRG+ T+ + I AG+ +
Sbjct: 69 AGGDPQQALPLAAGIQLLHDFSLIHDDIEDDSA--MRRGRRTLWHIWGLAHGINAGDAMF 126
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
A I + R +L I L+ G + + I +
Sbjct: 127 VIAHLAIHRLSERGLPAERVLSILRRFDEIILRICEGQYLDLSFEGDLSITPADYLTMIG 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL+ A E GA A A L FG +G+ FQ+ DD+L
Sbjct: 187 GKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDDILGIWG 236
>gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
33392]
gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
33392]
Length = 331
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 18/237 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + ++++ + + + Y + GG K+IR +
Sbjct: 9 MDMHAIQALTDADMQKVNQAILAQINSDVPMVNQLGF--------YIVQGGGKRIRPLIA 60
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A +E IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 61 VLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATANSAFGNAASVL 118
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ I + L Q M +
Sbjct: 119 VGDFIYTRAFQLVAQLQSLDILRIMADATNVLAEGEVQQLMNVNDPDTTE------ESYM 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A +S AI+A A ++ + + +G LG FQL DD+LD +
Sbjct: 173 RVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVLDYSANAA 229
>gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Actinomyces viscosus C505]
gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Actinomyces viscosus C505]
Length = 369
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 85/235 (36%), Gaps = 16/235 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + I+ L +++ + L A GGK++R L A
Sbjct: 10 PELESRIIPALQTIEDRLMEVVTSADETINPPT-SHLAEA------GGKRLRPVLALLTA 62
Query: 63 SLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + A + + MD +RRG P+ + AI+ G
Sbjct: 63 QLGDPALAATGEEIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L+ A +++++ + + + L +
Sbjct: 123 DVLVARASQLVAALGPEAVMAHAKTFERLCMGQLH-------ETLPRPAGTDPVDHYIQV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA++ A ++ + FGE +G+ FQLADD++D D
Sbjct: 176 LADKTGSLIAVSARYGAMLTGAGTRTEQIVEEFGERIGVAFQLADDVIDLMSDSA 230
>gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1]
gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1]
Length = 318
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 11/223 (4%)
Query: 17 DTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTAL 73
+ +DLLL+ S T + ++ + GGK+IR V A L NVN
Sbjct: 11 EQYFNDLLLKAVSSDSTLFSDPKMMNDLLQIIMNGGKRIRPLFVLLAADLKENVNKQEIY 70
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
AIE +H SLIHDD+ +D R T+H QY + GN +L + E+ S
Sbjct: 71 TAAVAIELMHVASLIHDDI--IDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSE 128
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
K + +M +L Q + + + KTGAL+ +
Sbjct: 129 FKIPKLHQEIAVVMNNLCLGE------LNQQHNHFNFDLSFDDYINKSYQKTGALISLSL 182
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
G ++A N +L G +GI +QL DD+LD K
Sbjct: 183 VVGGLVAGLDANIINQLSTIGSQIGIAYQLKDDILDFTSTSKK 225
>gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
Length = 575
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 15/225 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ L ++L ++ D + GGK+ R + A ++
Sbjct: 263 AAFEARLREVLRSRVEFIELIGEDLVA-------AGGKRARPTVTFLAAQALGLDGQDPR 315
Query: 74 RVGAAIECI---HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +S +D+ RRG+ ++ V ++++G+ +L +
Sbjct: 316 WQTVTDLAVCIELLHSASLLHDDLIDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLLTL 375
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+++ S Q I KT AL+
Sbjct: 376 LAAMPQGPALTRAFGQTASQICEG-----EVLQFQVAAYAEYGLAPYLDIIHGKTAALIE 430
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A S A++ +A + ++ L FG G+ FQ+ DDLLD D
Sbjct: 431 LAAFSPALLLNAPEAQRAALATFGREYGLAFQIQDDLLDLMGDEA 475
>gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
Length = 379
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV
Sbjct: 88 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 145
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T T + L +
Sbjct: 146 KVHGPAQAILVGDALFALANEVLLELGTVDAGR---AARRLTTASRALIDGQAQDISYEH 202
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 203 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLL 262
Query: 229 DCEEDLP 235
D
Sbjct: 263 GIWGDPE 269
>gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
Length = 330
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 62/211 (29%), Gaps = 19/211 (9%)
Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLI 88
+ L GGK++R + + I S
Sbjct: 14 DFVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDIIDASTT 73
Query: 89 HDDLPSM----DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
P++ + + E AI+ G+ L +A ++I + R
Sbjct: 74 RRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASARI 133
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ S L G + + + + + + + GA +A A
Sbjct: 134 SPVWSAMRTEVLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAALAGADD 193
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
R FG ++GI FQL DDLL D
Sbjct: 194 TLVSAYRRFGTDIGIAFQLRDDLLGVFGDPA 224
>gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
Length = 366
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 78/252 (30%), Gaps = 25/252 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTE--- 60
L + + L L A+++ + A+ Y L GGK+IR V
Sbjct: 10 DLDQIPDVVRERLTRFLDDRAANVVAIGGP-VTEALSYLRDFVLNGGKRIRPLYVWAGFV 68
Query: 61 CASLFN-------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK--- 104
A + + I S P++
Sbjct: 69 AAQGPGRSSEDINAVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVESMHGAVG 128
Query: 105 -PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ E AI+AG+ L +A +++ R++ + G L
Sbjct: 129 LEGDAAHFGESVAILAGDMALVWAEDMLQDSGLSAAALARARDAWRGMRTEVIGGQLLDI 188
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
L+ Q E + + + GA +A + + LR +G ++GI FQL
Sbjct: 189 YLEAQASESVELANSVNRFKTAAYTIERPLHLGASLAGGAPELIDALRNYGRDIGIAFQL 248
Query: 224 ADDLLDCEEDLP 235
DDLL D
Sbjct: 249 RDDLLGVFGDPA 260
>gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
Length = 330
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRQRLASDVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGDTTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADAKTEAAAAEYGRRIGTAFQIMDDWLDYTGTAE 229
>gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
Length = 344
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 17/235 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + + ++ +D ++ L + + RY + GGK++R L+
Sbjct: 25 TSAILALIADDMHEVDKVIGLRLQSSVPLIG--------EIARYIISAGGKRLRPALLLL 76
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A IE IH +L+HDD+ +D +RRG+PT + + +++ G
Sbjct: 77 MSGALGYQEAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTANENFGNPASVLVG 134
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + AF+++ I S+ + Q M + D +DE +
Sbjct: 135 DFLHSRAFQMMVDADDMRVMQILSEATNIIAEGEVQQLM------NTHDATLDEQGYLEV 188
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L + A++A A +E +G+ LG FQ+ DD+LD + +
Sbjct: 189 IRSKTAKLFEASARLAAVLARAPAAIEEACAEYGKALGTAFQVIDDVLDYDGNSA 243
>gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct]
Length = 360
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+L++ I + + + + + Y + GGK++R LV A
Sbjct: 28 QQLKDIQALIKEDIQNNNQFIVDSLCSDVV-LINQISHYIINSGGKRLRPLLVMLFARAL 86
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N N L A IE IH +L+HDD+ +D+ +RRGK T + + +++ G+ L +
Sbjct: 87 NYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYS 144
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF+++ S I + ++ LQ + + + + KT
Sbjct: 145 RAFQMMVSLDNMQIMQILADATNKISEGEVLQLLNARNSELSE------EEYIKVIYCKT 198
Query: 186 GALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
L ACE +++ Q+ + R++ +G LG FQ+ADD+LD D
Sbjct: 199 AKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 251
>gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
Length = 342
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV
Sbjct: 51 GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T T + L +
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGTVDAGR---AARRLTTASRALIDGQAQDISYEH 165
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 166 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLL 225
Query: 229 DCEEDLP 235
D
Sbjct: 226 GIWGDPE 232
>gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 258
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+ +I+ L +LL L A+ Y + GK+IR L ++
Sbjct: 3 FDDLRPKIEKRLRELLTPFE-------PKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDL 55
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A+ +G A+E IH YSLIHDD+P +DN RRGKPT H + + A++AG+GLL+ A
Sbjct: 56 DEEDAITLGCAVEFIHNYSLIHDDMPELDNDDERRGKPTCHKIFGQDIALLAGDGLLSLA 115
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+I+S+ ++++ ++ N G++GM+ GQ+ D E + +KT A
Sbjct: 116 FDILSNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYD----IKGEKDFLKVASLKTAA 171
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L+ + +I+ + E+L G N+G++FQL DD D
Sbjct: 172 LIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQLTDDYYD 210
>gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum]
Length = 485
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 89/239 (37%), Gaps = 14/239 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L + I L S +Q H + + Y L GK+IR ++
Sbjct: 159 VDSDLQKLTNNIVEHIKNHLSG-NSSIGSGLQKPHPILVSISSYYFQLKGKRIRPTIILL 217
Query: 61 CASLFNVNHLTALRVGAAIECI----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + I+ ++ +D RR P+V+ + +
Sbjct: 218 LSRCLLQQKNITEPIASQIKLAEIVEMIHTATLVHDDVIDEATTRRDVPSVNKSFSNKLS 277
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+ G+ LL A ++S + + S L ++ G+ + ++ Q
Sbjct: 278 ILCGDYLLARASVLLSQLRNPDVSELISTS---------LADLVEGEFMQVKSNESSFEQ 328
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+KT +L+ +C++ A++ + FG+NLG+ FQL DDLLD
Sbjct: 329 YLRKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKNLGLAFQLIDDLLDYTSTTE 387
>gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52]
Length = 303
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHL-----T 71
+ L H+++ H + L GGK+ R L +L
Sbjct: 14 ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +IEC+H YSLIHDDLP MDN +RR PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74 YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ + + +LS I + ++ + Q+ + + KT L+
Sbjct: 134 SNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKTAKLISA 193
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G + + + + L+ FG G+ FQ+ DD++D +D
Sbjct: 194 SLMMGLVASGIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238
>gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
Length = 269
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDL 92
N +L A+ + + GK++R L+ A V+ A AIE IH YSLIHDDL
Sbjct: 3 NTQLNRALSHTSTNPGKRLRPQLLQAAARATGNPVSEALAAAPAEAIELIHTYSLIHDDL 62
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLT 151
P+MD+ +RRG+PT+H+ +DE TAI+ G+GL AFE+I+ + + I L+
Sbjct: 63 PAMDDDDMRRGRPTLHVAFDEATAILVGDGLQAKAFELIASEEQLSAQQRIDLVACLAKA 122
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G ++ + + Q+ I +KTGAL+ A G I+ A+ ++K L+
Sbjct: 123 AGFEGMVGGQGLDIEATERTLSVEQLKNIHALKTGALITAALVMGGIVGQANPDQKHILK 182
Query: 212 CFGENLGIIFQLADDLLDCEED---LPK 236
G+ +G+ FQ+ DD++D D L K
Sbjct: 183 AVGDKIGLAFQIIDDVIDVRSDSTTLGK 210
>gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Weiss]
gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum MopnTet14]
gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
muridarum Nigg]
Length = 292
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 110/237 (46%), Gaps = 18/237 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+I+ L D L L + I YALLGG K++R LV A
Sbjct: 7 YRSKIEKRLRDSLEDFGK-----TQSGLRNPIEYALLGGGKRVRPLLVCLFADSI-QKRR 60
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L A+E IH +LI DDLP MDN +RRGKP+VH +DE +A++A L+ A+
Sbjct: 61 DVLDTAIAVEYIHTSTLIADDLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYAR 120
Query: 131 ISSPKTQLKDNIRSQLMLSLTH---------NIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
I LK+ + Q + + G++G+LGGQ D+ + E V I
Sbjct: 121 IRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLGGQYEDVFFQSFTEESVINII 180
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
KT AL AC SG + ++ + + F N GI+FQ+ DDL D +D K
Sbjct: 181 NKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEK 237
>gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023]
Length = 326
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A
Sbjct: 13 LSKDLQEVLQTIESNIQIRDKHVEKNVKDLIH-------AGGKLLRPAFALLSAQA-GPE 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 FDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMDVTVREYLSRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A + + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 309
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
IDT++ D L + + + GGK++R L
Sbjct: 1 MAAIDTLIHDRLTSDIVLINQIADHII-------CSGGKRLRPMLTMLAGHAIGPTGPHH 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ A IE IH +L+HDD+ +D +RR + T + + +++ G+ L + +F++++
Sbjct: 54 HQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQLMT 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I ++ ++ LQ + + + DET + + KT L A
Sbjct: 112 ELANLEVMQILAETTNRISEGEVLQLLH------VHNPDTDETTYLSVIERKTAILFAAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ GA+ +HA + R+ +G LG FQ+ DD+LD + L K
Sbjct: 166 AQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTANNSQLGK 212
>gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797]
gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797]
Length = 330
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 14/227 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYAL-LGGKKIRSF 56
M L + + R++ ++ L Q ++ + + + +++ GK++R
Sbjct: 1 MGDHLTT--HDLLARVEELIGGELEQAERVFLSEVSSKHPYVHDVLQHITRFQGKRLRPI 58
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ A+ + + + + +E IH +L+HDD+ +D+ IRR TV+ +++ T+
Sbjct: 59 LLLLSAAATGGINESHYVLASVVEMIHLATLVHDDV--LDDALIRRHVATVNSRWNNETS 116
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L T+AF + +S + + + Q G + Q
Sbjct: 117 VLVGDFLFTHAFHLTASLGDARACRLIGRATNLVCEGELAQIYERGNHELSE------EQ 170
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
I KT L + + GA+ A A ++ E + +G LG+ FQ+
Sbjct: 171 YLEIINGKTAELCAISTQLGALYASADESIVEAMDEYGRALGVAFQI 217
>gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana]
gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 417
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 10/232 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECAS 63
L+ + + L L S + ++ + +A + GGK++R LV A
Sbjct: 94 SLETLFEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAE 153
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + LT ++ +D +RRG+ TVH + A++AG+ +
Sbjct: 154 LAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFM 213
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +++ + + SQ++ Q D+++ ++
Sbjct: 214 FAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKS------YY 267
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ + + AI + E++ FG+NLG+ FQ+ DD+LD +
Sbjct: 268 KTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTE 319
>gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
Length = 336
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 20/238 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
+ +K +D ++ + L + Y + GGK++R L+
Sbjct: 18 DSIKKLTTAEAKAVDQLIINELSSDVVLINQMG--------HYIVGSGGKRLRPMLLLLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + L + A IE IH +L+HDD+ +D+ +RRGK + + + +I+ G+
Sbjct: 70 AKALGGANDNHLLMAAVIEFIHTATLLHDDV--VDDSDLRRGKESANAVWGNAASILVGD 127
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AFE++ I S+ ++ LQ + + E + +
Sbjct: 128 YLYSSAFEMMVRTGNMRVMEILSKTTTAIAEGEVLQLLNC------NNPETTEQKYLEVI 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L A + A++A AS ++ L +G++LGI FQL DD LD + +L K
Sbjct: 182 ARKTAILFSAATKLAAVIAGASTETEQGLSLYGQHLGIAFQLIDDALDYKASKDELGK 239
>gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
Length = 337
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GK +R L A AL A+E +H +SL+HDDL MD RR +
Sbjct: 49 SADAGKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRR 106
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
TV + +AI+ G+ +L A E++ L + H I Q
Sbjct: 107 TVWKLWGPSSAILTGDAMLALAQEVLLDTGLPTAAPAARLLARTTRHLIRGQVQDLSFEQ 166
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + KTGAL+ + GA++A A + + L +G+ +G+ FQL D
Sbjct: 167 RSHVTV---EECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVD 223
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 224 DVLGIWGDPA 233
>gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130]
gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130]
Length = 289
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 12/227 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
+N+ RI+ L+ L + A +L +A+ A+ GG ++R L A +
Sbjct: 2 DNAARIEECLERSLSRAA---NADCPPKLRAAVHSAVFPGGARVRPQLTLAVAEACGDHE 58
Query: 70 LTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + AA IE +HC SL+HDDLP D+ +RRGKPT+H Y E A++ G+ L+ AF
Sbjct: 59 IELVDGAAAAIELLHCASLVHDDLPCFDDADLRRGKPTIHSLYGEEIAVLTGDALIIEAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + Q + + + GM G E D V KTG+L
Sbjct: 119 NTLCASSAQHPSRLPALVAAVC----AATGMTTGITAGQAWESEDVVDVERYHCAKTGSL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A +GA+ + R G +G +QLADDLLD
Sbjct: 175 FVGAVCAGALAVGSDP---LPWRSLGSRIGAAYQLADDLLDALGSEE 218
>gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
SJ-7A-US]
gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
SJ-7A-US]
gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
Length = 288
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 11/232 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + ++ ID L+ L + + + Y++ GGK++R L
Sbjct: 1 MT-EFTNFYKKYQPIIDHYLEQHLASE------IEDKKFSQIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ +RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+
Sbjct: 54 ATLISLGKEINEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LL E I+S K + + + G + + E +
Sbjct: 114 AGDALLPMGLEWIASAKNAEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFINR- 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + E I A+A+ ++ L F N G +Q+ DDL+D
Sbjct: 173 -MEWLKTGCLIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDV 223
>gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500]
Length = 417
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 14/196 (7%)
Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDDLPSMDNGY 99
Y + GK+IR ++ A N + + + + ++ +D
Sbjct: 105 YFEMKGKRIRPTVLLLLARAITSNDCPSEPISESQLKLAQVVEMLHTASLVHDDVIDGAD 164
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
RR +V+ Y AI+ GN L ++S+ + + S + +
Sbjct: 165 TRREMASVNCAYSNKLAILCGNFLTARTIVLLSTLRNHHVTELVS---------NIISDL 215
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ G+++ I+ +KT +L C S A+++ A N FG+NLG+
Sbjct: 216 VDGELMQIKSNSTSFESYIRKTYLKTASLFANGCRSIAVLSGADANMTNMATEFGKNLGL 275
Query: 220 IFQLADDLLDCEEDLP 235
FQ+ DDLLD
Sbjct: 276 AFQIIDDLLDVTGSSE 291
>gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
Length = 315
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 15/233 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
L++ + + +L D+ + +++L I+ Y GGK++R L+ C+ L +
Sbjct: 2 LKQYDELVQEVLKDIF-----VITKSEDEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDF 56
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N+ + A ++ +D RRG T++ ++ + A++ G+ L +
Sbjct: 57 NNNKKNIIRMASIVEIIHTASLIHDDIIDKAETRRGNITLNKEFGDEFALLVGDYLFSIV 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S + +L + + + L +Q + + K KT
Sbjct: 117 LREVSEFENELIHSYLATTLKELCIGELIQE------DGLYNLNTRRLDYLRKIKRKTAI 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
L+ FA SG+I++ A + + + FG LG+ +Q+ DD LD L K+
Sbjct: 171 LIAFATVSGSIISGAKKEDVDSSYRFGYYLGMSYQIIDDYLDFAGGATSLGKE 223
>gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
Length = 315
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 83/231 (35%), Gaps = 19/231 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+ + L +L+ ++ H D + GGK+IR LV +
Sbjct: 7 LEAKLAAFEEALSELVRSEVLFVRLIHQDLV-------TAGGKRIRPRLVFLASGAVGGA 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ +S +D +RRGK + +Y ++++G+ LL+
Sbjct: 60 PFELE---LALAVELLHSATLLHDDLIDEAELRRGKEAAYRRYGNAVSVLSGDFLLSRLL 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + ++ L LQ + + + I KT AL
Sbjct: 117 HVVAKTGSLELVEAFAETARVLAEGEVLQFQVAALEDYSLENY------ERIITAKTAAL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M A E A++ +E LR FG G FQ+ DD LD L K
Sbjct: 171 MALATEGPALLKGLKGAWREALRRFGLLYGQAFQMRDDYLDLMGSPEALGK 221
>gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136]
Length = 336
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 11/218 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+++LL++ A + + GK+IR L ++
Sbjct: 23 ERVEELLMEQARAFDPNVEGYISYVCNTS---GKRIRPALAVLAGGATGGVTHEHRQLSI 79
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+E IH SL+HDD+ MD IRR PT ++ +++ G+ L YA E+ +
Sbjct: 80 ILEMIHIASLVHDDI--MDGATIRREMPTAAAKWGNALSVLLGDSLFAYALELATQFDES 137
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + LQ + F I +MKT AL A E GA
Sbjct: 138 SICRKIARASRDVACGEILQTQRRFDFTLSM------EEYFKIIEMKTAALFASATELGA 191
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ S + + +G LG +Q+ DD +D D
Sbjct: 192 RLNGCSDSVVASMYNYGNRLGTAYQIYDDCIDLVGDEK 229
>gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix
orenii H 168]
gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix
orenii H 168]
Length = 326
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 10/229 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+ E +R +++ + + + + A R + GGK++R LV A L +
Sbjct: 6 SIAEYRQRFAPVIEK-IDEIIWEITKTRVGLINIATRDLVESGGKRLRPLLVVLSARLGD 64
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + +AIE +H +L+HDD+ +D IRRG+ + ++ + A+ G+ +L+
Sbjct: 65 FDKEKIYHIASAIELLHMATLVHDDI--IDEARIRRGEISAQSKFGKDVAVFLGDFMLSR 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF+I + ++ ++++ + Q + + + KT
Sbjct: 123 AFDIFTLYLSRHSLRKLNKVVGLICEGEIDQYEDKFEYKVSI------REYLRRIRRKTA 176
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + GA + + FG LG FQ+ DD+LD D
Sbjct: 177 LLFGLSTYIGAYESGVRGRNLSNIYRFGLRLGTAFQIQDDILDFVADPE 225
>gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 297
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 18/240 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
S L +++ ++ + ++ A YAL GGK+ R LV A
Sbjct: 5 SILLSYQAQVEAKIEQSIAAL------GAKSKVRDACEYALRNGGKRFRPALVLMVAKTL 58
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+E H SLI DDLP MDN RR P++H + E A++A L+
Sbjct: 59 GKQADASEA-ALAVEFFHTASLIADDLPCMDNDDERRNMPSLHKVFGEDIALLASYALIA 117
Query: 126 YAFEIISSP----------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ ++ + D++ + ++++N GL G GGQ LDI + + +
Sbjct: 118 EGYRYLAQNSETLKQQQVSFSDRCDHLCVLAIQNVSYNTGLFGATGGQFLDIHESNLSLS 177
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KT +L + G + + ++ + G+ FQ+ADDL D ++DL
Sbjct: 178 ALRDILHKKTVSLFEISFVLGWLFGGGELEKLPLVKKAASHFGMAFQIADDLSDMQQDLK 237
>gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 350
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 69/236 (29%), Gaps = 14/236 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
R+D +L + + + + + + +R A GK++R+
Sbjct: 13 KDRVDAVLRGFVDEETALLLAVDAELAPVAEQLRTATAYGKRLRAAFCYWGWRAAGQPDS 72
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL AA + + + +D +R G PT + +
Sbjct: 73 DALVRAAAAMELVHAAAVV-HDDLIDGSALRHGLPTAQFALRAAVSGRRRPAAARSLALL 131
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----------DETQVFM 179
+ + L + + + ++ + +
Sbjct: 132 VGDLLMSWAGQLFVSSGLPAAYLSRARPLWAALARELIAGECLEILRTGAVPDVRDSLKV 191
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+ + G +A AS + +E +G LG FQL DDLL +
Sbjct: 192 IRYKTAKYTVEQPLLIGGALAGASPDLREAFSDYGLPLGEAFQLRDDLLGLFGETA 247
>gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
Length = 290
Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RV 75
+ +D L + H+Q+ H A+ Y L GGK+ R L+ N + + V
Sbjct: 5 QLFEDHLQKNLPHVQSFHPFY-TDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDV 63
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIE H YSLIHDDLP MD+ +RRGK T+H +YDE+TA++ G+ L TYAF I+ K
Sbjct: 64 AMAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIA--K 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFAC 193
+ L + R++L L N G++GM+ GQ+LD E Q+ + KT L+ +
Sbjct: 122 SALSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASL 181
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ GA++ E+ RL FG +LG++FQ+ DD++D
Sbjct: 182 QMGAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIID 217
>gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 330
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRHRLASEVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I ++ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILAEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A A + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADARIEAAAAEFGRRIGTAFQIMDDWLDYTGTAE 229
>gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp.
(strain APS)
gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 282
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ RI+ L L Q LL A++Y++ G K++RS L+ +F VN
Sbjct: 8 ERYKHRINQKLFYTLNQL-----PFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVN 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
T + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF
Sbjct: 63 ITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF 122
Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
I+S+ + + R +++ L+++IG GM GQ LD + + ++ +++ +I KT
Sbjct: 123 NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKT 182
Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
LM A ++ S++ L F ++G+ FQ+ DD+LD ++D K
Sbjct: 183 SFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234
>gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
HTCC2594]
gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
HTCC2594]
Length = 340
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++T++ D + + A GGK++R L A L
Sbjct: 30 MNAVNTVILDRMQSEIPLIPRL-------AGHLISGGGKRLRPMLTLAGAELVGYQGSRH 82
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ AA+E IH +L+HDD+ +D +RRGK +I + ++ G+ L + AFE+++
Sbjct: 83 HKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAANIIFGNPATVLVGDFLFSRAFELMT 140
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + Q + E + I KT AL A
Sbjct: 141 EDGSLRVLKILSNASAVIAEGEVAQL------SAQRKLETSEERYLDIIGAKTAALFAAA 194
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A++A + + L +G NLG+ FQL DD +D + D
Sbjct: 195 SRISAVVAECDDSHERALDDYGRNLGVAFQLVDDAIDYDSDAA 237
>gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
Length = 302
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 9/229 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
LQ+ + I + + S ++ +A+ YA GGK +R+FL E A + +N
Sbjct: 18 LQDALAQASKIAEARIGFALSGLEGDVP----AAMLYAASGGKALRAFLALETARMLGIN 73
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A AAIECIH YSL+HDDLP MD+ +RRG+PTVH ++D+ TA++AG+GL AF
Sbjct: 74 PVAAAGAAAAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHQKWDQATAVLAGDGLQALAF 133
Query: 129 EIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
E++ + + + + LS + G + +D Q+ +Q KTG
Sbjct: 134 ELLIQAECAPRAKLNLLMSLSNAAGVRGMVGGQAADIAAETAAVPLDLEQIMDLQASKTG 193
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ ++ G MA + E+E L +G NLG+ FQ+ADD+LD D
Sbjct: 194 ALISWSALVGPRMA---ETEREPLSIYGANLGLAFQIADDVLDATGDAA 239
>gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
HTCC2181]
gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
HTCC2181]
Length = 321
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 18/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + S + + ++ ++ L + N + S GGK++R +
Sbjct: 1 MLSTILSPISNDLNEVNNVIRKSLFSEIPIVNQISNHIINS-------GGKRMRPSIHLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + + + A IE IH +L+HDD+ +D RR K T + + ++++ G
Sbjct: 54 FAKLTGEINTSHHAMAAIIEFIHTATLLHDDV--VDQSTQRRSKKTANALFGNSSSVLVG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + + +F++++ I + +++ LQ + + F +
Sbjct: 112 DFIYSRSFQMMTKINNMEVMEILADATNAISEGEILQLLNTKNPDLSE------NDYFQV 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L ++ Q +++ L G GI+FQL DD+LD ++ K
Sbjct: 166 IGFKTAKLFESCGSLAGVLNEVDQEKQKDLAKLGNIFGIMFQLTDDILDYSGKEIEMGK 224
>gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
Length = 324
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSKASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
Length = 324
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVTEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGDAVNDADLVRAAVVMELTHVASLY-HDDVMDEASRRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSKASLAVAELGVDFVK-------LQARTFSRLVQGQIAETRGPSQGQDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221
>gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa]
gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa]
Length = 355
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L++ +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 35 IQQDLKDEVTKLNNLIISCLKSDEELIEKVG-KYLLEA------GGKRIRPLLTIITAKM 87
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 88 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 145
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ + +I++ +L+ I +G + + + I + I K K
Sbjct: 146 SQSFKLMVA-----SGSIKAMHVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSK 200
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L AC G I+A + + ++ FG+ LG IFQ+ DDLLD
Sbjct: 201 TAELFGTACAVGTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDYLG 248
>gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase
[Candidatus Kuenenia stuttgartiensis]
Length = 327
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 11/229 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
G+ ++ +ID +L +L + + L I Y + GK++R +
Sbjct: 2 GIEDSIRTYGAKIDDMLREL-------IPVDEENYLSEPIWYHMNTKGKRVRPAICLITC 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N AL AIE +H L+HDD+ D + V
Sbjct: 55 EALGGNPENALSFALAIEVLHNMFLMHDDIEDGDTVRRDQPTVWVKYGTANAINAGDYLL 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
Y + S + + + L L+ + Q + + + +
Sbjct: 115 ACAYKSTLASPVAPEKRLKLLEALTLTYGKTVEGQALDINARAAESFTVAAYMK---MVE 171
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+KTG + GAI+A AS E++ G+N+G FQ+ DDL+D
Sbjct: 172 LKTGYYLACGMVGGAIVAGASNEVVEKIWMLGKNMGPAFQIRDDLIDLT 220
>gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 325
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L + I +++ Q +++ + + Y + GK IR V A
Sbjct: 1 MKIILDKIKNPIKKEINEFEKQF-TNITKSNVSLIDQITHYIIHRKGKLIRPIFVFLIAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ IE IH +L+HDD+ +DN +RRG +++ + A++ G+ L
Sbjct: 60 MLGNIQKKTYHTACLIELIHTATLVHDDV--IDNSSLRRGSFSINAIWKNKIAVLIGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + + ++ I Q + ++ LQ ++ + + I
Sbjct: 118 LSKSLLLATNNNYYDLLKIICQTIKDMSEGELLQMEESDKLNITEKTYNQ------IIYH 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT +L+ +CE GA + + ++R FG +GI FQ+ DDL D E
Sbjct: 172 KTASLIAASCECGARSVNVDEKTALKMRKFGLFVGIAFQIKDDLFDYE 219
>gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC
19977]
gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
abscessus]
Length = 328
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ +K++++ I+T++ S + S + GGK+ R
Sbjct: 8 DPVFAAKVRDHLAAIETLI-------VSELGQSDPLLTESVLHLFHAGGKRFRPLFTVLA 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A C + MD RRG P+ + ++ AI+AG+
Sbjct: 61 AQ-TGPDPDNDEVILAGAVCELIHLATLYHDDVMDEAQKRRGVPSANARWGNNVAILAGD 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A ++S I ++ L + + + D + + +
Sbjct: 120 YLLATASRLVSRLGPT-AVRIVAETFAELVTGQMRETVGVPEGGDETEHY------LKVI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KTG+L+ A GA+ + ++ ERL G +G FQ++DD++D E + K
Sbjct: 173 HEKTGSLIAAAGRFGAMTSRCDDDQIERLSRLGAIVGTAFQISDDIIDIESLTDESGK 230
>gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 282
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ RI+ L L Q LL A++Y++ G K++RS L+ +F VN
Sbjct: 8 ERYKHRINQKLFYTLNQL-----PFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVN 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
T + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF
Sbjct: 63 ITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF 122
Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
I+S+ + + R +++ L+++IG GM GQ LD + + ++ +++ +I KT
Sbjct: 123 NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKT 182
Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
LM A ++ S++ L F ++G+ FQ+ DD+LD ++D K
Sbjct: 183 SFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234
>gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
Length = 322
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
I+ + + +H+ + + Y + GGK++R LV A+ +
Sbjct: 9 AIEPQFEAVNDYIINHLGSNVP-LVEKIGHYIVESGGKRLRPLLVLLAANAAGYKGDKHV 67
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ A IE IH +L+HDD+ +DN +RRGK T + ++ +++ G+ L + AF+I+
Sbjct: 68 PLAAIIEFIHTATLLHDDV--VDNSDLRRGKDTANAKWGNAPSVLVGDFLYSRAFQIMVE 125
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + S + LQ + ++ ++ + KT L A
Sbjct: 126 IGSMQIMEVISNATNVIAEGEVLQLLNTKNPDTTEEAYMQ------VILGKTAMLFEAAT 179
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E+GAI+A A+ E+E LR +G +LG FQL DD++D
Sbjct: 180 EAGAILADATAEEREGLRLYGLHLGTAFQLIDDVMDYLSTAE 221
>gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
Length = 294
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 95/235 (40%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
LP L + ++ +++ L + + A+ YA GGK +R+FL E A L
Sbjct: 10 LPDALAQAARIATQMIEAQLSDLSGPVP--------DAMIYAARGGKALRAFLAIETARL 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
V A AAIECIH YSLIHDDLP MD+ +RRG+PTVH ++DE TA++AG+ L
Sbjct: 62 HGVPPQVAAHAAAAIECIHAYSLIHDDLPCMDDDDLRRGQPTVHKRWDEATAVLAGDALQ 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMI 180
AFE++ + D + L LSL G++GM+GGQ DI E D Q+ +
Sbjct: 122 ALAFELL--GRLDCADAAKLDLTLSLAQAAGVRGMVGGQAADIAAETADVPLTLDQIIAL 179
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q KTGALM +A G MA A Q LR +G+ LG+ FQ+ADD+LD D
Sbjct: 180 QAGKTGALMSWAALVGPRMALADQ---AALRLYGDCLGLAFQIADDVLDVTGDAA 231
>gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 989
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ +R L L GK+IR+ V A + ++ A A + + +
Sbjct: 691 DPALVQQVVRQILSLPGKRIRALCVYLSACVGRRSYPQAAENIALAVELVHAASLL-HDD 749
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
+D RR +P+ ++ Y +I+ GN L+ A +++ + + + ++ +
Sbjct: 750 VIDLAPQRRHQPSSNMVYGNAASILGGNFLVVQAAQLLLNTGRPGLAADLLRAVEAMILS 809
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
Q GQ++ Q I + KT L + C++GA +++ E L +
Sbjct: 810 ESEQLENRGQVILNP------EQYLNIIRGKTATLFRWGCQAGASISNHPAAVVEALARY 863
Query: 214 GENLGIIFQLADDLLDCEED---LPK 236
GENLG+ FQL DDLLD + L K
Sbjct: 864 GENLGMAFQLIDDLLDVIGEGTLLGK 889
>gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 280
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 19/229 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
L+ I+T L+D+L + + L + + L GGK++R +
Sbjct: 2 EYLERRRDLIETRLEDVLASVD---PAELSSELENVV---LAGGKRVRPTVSLLVCEAVG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A+ +E +H SL+ DD+ +D RR P+ + A+IA +GL+
Sbjct: 56 AEPEDAVDFAVGVELVHNASLVVDDI--IDESDRRRDSPSAWSAFGHGPALIASDGLIGE 113
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF + S+ + ++ + + + G+ ++ E + + KTG
Sbjct: 114 AFALFSTDERAMRAVSEAMVE-----------LGEGEATELAAMPDSEDAYRQLARRKTG 162
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL A E GAI A A E + E +GI FQ+ DD+LD D
Sbjct: 163 ALFRAAAELGAIAADADARTVEAFGQYAEQVGIAFQIRDDVLDATGDAE 211
>gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 282
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ RI+ L L Q LL A++Y++ G K++RS L+ +F VN
Sbjct: 8 ERYKHRINQKLFYTLNQL-----PFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVN 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
T + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF
Sbjct: 63 ITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF 122
Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
I+S+ + + R +++ L+++IG GM GQ LD + + ++ +++ +I KT
Sbjct: 123 NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKT 182
Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
LM A ++ S++ L F ++G+ FQ+ DD+LD ++D K
Sbjct: 183 SFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234
>gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262]
gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262]
Length = 326
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 14/228 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A
Sbjct: 13 LSKDLQEVLQTIESNIQIRDKHVEKNVKDLIH-------AGGKLLRPAFALLSAQA-GPE 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 FDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKMDVTVREYLSRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+C SGA + A + + G LG+ FQ+ DD+LD D
Sbjct: 180 FALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227
>gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
45221]
gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
45221]
Length = 344
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 12/230 (5%)
Query: 9 LQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
E + LDD L + M+ + D + ++ GK++R LV
Sbjct: 17 FAEVYAPVKPYLDDLDVFLQSQVAEMEPEVQDHVRYVFGHS---GKRLRPMLVAYSGWEG 73
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
V + +D R + T ++ A++ G+ L +
Sbjct: 74 PALTRADDLVKLGSVIELVHLATLVHDDILDEADTRHRQETAAKKFGPAAAVLIGDVLFS 133
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+A ++ + T +Q + Q G++ ++ + + ++KT
Sbjct: 134 HALKLAAEFDTNEVCRTVAQATSRVCAGEIAQTYQRGEVNYSREFYFR------VIQLKT 187
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L +C GA +A + E FG +LGI +Q+ DDL+D D
Sbjct: 188 AELFEVSCRLGAKVAGYTDEFSEAAGLFGRHLGIAYQIFDDLVDLYADES 237
>gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 309
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D ++ L + + Q + +++A GGK++R L+ A
Sbjct: 1 MREVDIVIAQRLTTSVPLI-AQISQYIIAA------GGKRLRPALLLLIAGALGHQGKNK 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F+++
Sbjct: 54 YILAAVVELIHTATLLHDDV--VDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + Q + + D ++E + + KT L +
Sbjct: 112 EVGSMRVLQILSDATNVIAEGEVQQLI------NTHDASLNEAGYLHVIRSKTAQLFEAS 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ A++A A+ ++ +G+ LG FQ+ DD+LD ++ K
Sbjct: 166 AQLAAVLAGATPEVEQACAAYGQALGTAFQIIDDVLDYTGNTQEMGK 212
>gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 333
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ + + LD++ ++++ N + +++ GGK+IR A F +
Sbjct: 19 AEVVQSGLDEVEGILREVVRSEFNPVMETSLHLVEAGGKRIRPLFTILAAQ-FGPSWDRE 77
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
V AA + MD +RRG + + +++ AI+ G+ L +A +++
Sbjct: 78 SVVKAAAVVELTHLATLYHDDVMDEATMRRGAASANAKWNNSIAILTGDYLFAHASTLVA 137
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ S+ L + M ++ KTG+L+ A
Sbjct: 138 DLGTE-AARTISRTFGELVTGQMRETM------GPREGEDPVEHYLTTIAEKTGSLIATA 190
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
G + + A++ + L+ +G+ +G FQ++DD++D + K
Sbjct: 191 ARFGGMFSDATEEQVAALQAYGDVIGSAFQISDDVIDIASPPEESGK 237
>gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
Length = 324
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 11/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ E I +D + M++ L + Y + GK++R V A +
Sbjct: 5 VAEIQAPIAAEMDLFEQKFKGQMKSDVM-LLDQIMNYIVKRKGKQLRPMFVFLMAGVCGS 63
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
R + IE +H +L+HDD+ +D RRG +++ + A++ G+ LL+
Sbjct: 64 ITEATYRGASLIELLHTATLVHDDV--VDESNYRRGFFSINALWKNKVAVLVGDYLLSRG 121
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++S + L + + LDI ++ E I + KT +
Sbjct: 122 L-LLSVDNNDFDLLRIVSTAVRELSEGELLQLYKARRLDITEDIYYE-----IIRQKTAS 175
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
L+ C GA A E+ FGE +GI FQ+ DDL D ++ K
Sbjct: 176 LIAACCAVGARSAGIDPQVVEKAHAFGEKVGIAFQIKDDLFDYGTAEVGK 225
>gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 89/244 (36%), Gaps = 23/244 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECAS 63
L + + L LL + N L++A + GGK++R LV
Sbjct: 34 LADLVAPVSDDL-QLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQ 92
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L N+ L A ++ +D RRGK TVH + A++AG+ +
Sbjct: 93 LSNIQELRPQHRRLAEITEMIHTASLIHDDVLDESDTRRGKETVHQTFGTRVAVLAGDFM 152
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ +++ + SQ++ Q +
Sbjct: 153 FAQSSWYLANLDNLEVIKLISQVIRDFASGEIKQAQNLFDTEVTLQNY------LDKSYY 206
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------E 232
KT +L+ + +S AI + ++ + ++ +G +LG+ FQ+ DD+LD
Sbjct: 207 KTASLIASSTKSAAIFSDSTSSVSNQMFDYGMHLGLAFQVVDDILDFTQTSEQLGKPAGS 266
Query: 233 DLPK 236
DL K
Sbjct: 267 DLSK 270
>gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 322
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 20/235 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFL 57
M+ + + ++ ++ ++ + L L+ + Y + GGK++R L
Sbjct: 1 MDIDAIRNLAADDMAAVNRLIQERLSSEV---------VLIDQMGHYIVNSGGKRLRPLL 51
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A +++ A +E IH +L+HDD+ +D +RRG+ T + + A+
Sbjct: 52 VLLAARAAGYRGEHHIKLAAVVEFIHTATLLHDDV--VDESTLRRGQDTANSIWGNEAAV 109
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L T AFE++ + ++ ++ +Q + D + E +
Sbjct: 110 LVGDFLYTRAFEMMVEVGLLPIMQVMARTTNTIAEGEVMQLLNC------HDPDVSEARY 163
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +L AC G +A Q + + L +G +LG +QL DD LD
Sbjct: 164 RDVIYRKTASLFEAACCLGGTIAGLPQAQTDHLAAYGLHLGTAYQLVDDALDYAG 218
>gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC
BAA-286]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 11/227 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+K + L + +N R+ I Y + GK+IR L+ A +
Sbjct: 7 IAKPVTEELKKFNTYYKDSVF-CNNVRIQEIIDYIMKSDGKRIRPILLLLAAKACGEINN 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
T +E +H SLIHDD+ +D IRRG +++ YD A++AG+ L+ A
Sbjct: 66 TTYNSAITVELLHTASLIHDDV--VDESKIRRGMASLNAIYDNKMAVLAGDYFLSTALIK 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ S L L Q+ +++ +DE + F + + KT +LM
Sbjct: 124 SVLTGNIEIISRVSDLGRDLAEGE------LNQLSLVKELILDEDEYFQVIRKKTASLMS 177
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
GA+ AS E ER GE LG+ FQL DD+ D D K
Sbjct: 178 VCMRIGAMSVDASSEEVERFTKLGEYLGVCFQLRDDIFDYFTDAIGK 224
>gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKAIQTLTANDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 LLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++++ + + S+ + + Q M + E
Sbjct: 111 VGDFIYTRSFQMMTTLGSLRILELMSEAVNVIAEGEVQQLMNC------NNPDTTEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GAI+ +S + ++ +G+ LG FQL DD++D D K+
Sbjct: 165 QVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD-GKE 222
>gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas
sputigena ATCC 35185]
gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas
sputigena ATCC 35185]
gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
Length = 324
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPS 94
DR+ + + GGK++R L A + + + A+E IH SL+HDD+
Sbjct: 30 DRITEIGTHLVKSGGKRLRPALFLLAARSSKDFDAKKMMPLAVALELIHMASLVHDDV-- 87
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D+ RRG T + + AI++G+ AF +I + + R ++ +
Sbjct: 88 LDHADTRRGAVTANAMWGNQQAILSGDYFFARAFLLIVENGFGERVSGRVAQLIMDLSSG 147
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+ Q ++ D + + KT + CE GAI + + LR +G
Sbjct: 148 EII-----QNKELYRASRDVEEYYERIAKKTANFLAICCELGAIATNLGAEAERGLRAYG 202
Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
+ +G+ FQ+ DDLLD + K
Sbjct: 203 KYVGMAFQITDDLLDLTSNEKK 224
>gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201]
gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201]
Length = 370
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 71/250 (28%), Gaps = 25/250 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + +D + H+ D RL+ A+ GGK++R+ L
Sbjct: 17 QFREDLDARIRGFFAVEREHVTAISPDATRLVDAVGQLTEGGKRLRARLCHWGWRAAGGE 76
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----YDEVTAIIAGNGLL 124
+ + V AA + +D RRG+P+VH + E
Sbjct: 77 AGSDVVVAAAASLELFQTAALIHDDILDRSDTRRGRPSVHRVFEALHRESGWAADPAHFG 136
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-------- 176
A + + + + + G + + +
Sbjct: 137 VSAAVLTGDMSLSFAEQLFADAAARVAPQAGARAREIFSTMRTEVMAGQYLDIHAEVAPP 196
Query: 177 -----------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ +++ + GA +A A + F LG FQL D
Sbjct: 197 AAEPARQLERAMTVLRYKSAKYSVEHPVAIGAALAGADEAFLRACAAFTLPLGEAFQLRD 256
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 257 DVLGVFGDPE 266
>gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + + ++ ++ L S + Y + GGK++R L A
Sbjct: 5 TIRALCAADMTAVNELILARLQSDVSLINQLGF--------YIVSAGGKRMRPMLTVMAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 57 RALGYEGQDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETANALFGNAASVLVGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++S I S ++ LQ M + ++ +
Sbjct: 115 LYSRSFQMMSELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTEQSYMT------VIY 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L A A++ H + ++ + +G+ LG FQ+ DD++D
Sbjct: 169 CKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDY 216
>gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
Length = 378
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 95/252 (37%), Gaps = 25/252 (9%)
Query: 6 PSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALL---------------- 48
P++ +D T L + A+ + DRL S +
Sbjct: 27 PAETAAARNAVDVTALLERGRTLATPVLKAAVDRLASPMDTVSAYHFGWIDAQGNPADGD 86
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + T + A+E +H +SL+HDDL MD RR + TV
Sbjct: 87 GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T T L +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGR---ATRRLTTATRALIDGQAQDISYEH 201
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 202 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLL 261
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 262 GIWGDPDSTGKQ 273
>gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
Length = 276
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 11/220 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
Q+ I+ ++ + L + S D+ I Y++L GGK+IR + S N
Sbjct: 2 FQKQIDYINNVISNFLAKLES-----IPDKTKELIIYSVLSGGKRIRPIFLINVVSESNY 56
Query: 68 NHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + L+ E +HC SLIHDDLP++DN RRGK T+H +Y E AI+AG+ L
Sbjct: 57 DTMLGLKEAILALELMHCASLIHDDLPAIDNDDFRRGKLTLHKKYGEGPAILAGDALQIM 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F I+S+ + +++ G+ G + + Q++ I +KTG
Sbjct: 117 PFNILSNIEDTNLAVKLIKILSDKAGVKGM----IGGQILDISNIENFEQIYNIMALKTG 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
AL + G ++ + + L G+++G++FQ+ DD
Sbjct: 173 ALFEASLMMGGVVGRLEDKQIKNLEEIGKSIGLLFQILDD 212
>gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + S ++ L +Q ++ + ++ +TQ KT M
Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E G ++ ++E L+ +G LG+ FQ+ DD++D
Sbjct: 180 GCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219
>gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLERVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + S ++ L +Q ++ + ++ +TQ KT M
Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMIKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E G ++ ++E L+ +G LG+ FQ+ DD++D
Sbjct: 180 GCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219
>gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
Length = 323
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKAIQTLTANDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 LLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++++ + + S+ + + Q M + E
Sbjct: 111 VGDFIYTRSFQMMTTLGSLRILELMSESVNVIAEGEVQQLMNC------NNPDTTEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GAI+ +S + ++ +G+ LG FQL DD++D D K+
Sbjct: 165 QVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD-GKE 222
>gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
Length = 401
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECA 62
+ LQ +I+ L +L + + R A+ YAL K++R LV
Sbjct: 60 TWLQLVQAQIEASLAELFELPD---EACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGY 116
Query: 63 SL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTA 116
L + A ++ + D +RRG +H + E A
Sbjct: 117 HLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAALHHLLAPGRAGEDLA 176
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L A E + + + H Q + +
Sbjct: 177 VVVGDHLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQA 236
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + C GAI+A A + + L G G+ +QL DD+L D
Sbjct: 237 LRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGDARM 296
Query: 234 LPK 236
K
Sbjct: 297 SGK 299
>gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
Length = 259
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ Y L GGKKIRS ++ + ++F +N+ T + +GAA+ECIH YSLIHDDLP MD+ IR
Sbjct: 1 MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RGK + HI++ E TA++AGN LLT AFEI+ S ++ + I+ L+ L+ G G+ G
Sbjct: 61 RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120
Query: 162 GQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
GQ LD + + + ++++ ++ KTG L F C I+ S + + G N+G+
Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGL 180
Query: 220 IFQLADDLLDCEE 232
+FQ+ADDL+D +
Sbjct: 181 LFQIADDLIDFKG 193
>gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 368
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 88/234 (37%), Gaps = 15/234 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + I+ L +++ + L A GGK++R L A
Sbjct: 10 PELESRIIPALQTIEDRLMEVVTSADETINPPT-SHLAEA------GGKRLRPVLALLTA 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + T ++ A + + MD +RRG P+ + AI+ G+
Sbjct: 63 QLGDPALATGEQIRDAGVAVELTHIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L+ A +++++ + + + L +
Sbjct: 123 VLVARASQLVAALSPEAVMAHAKTFERLCMGQLH-------ETLPRPSGTDPVDHYIQVL 175
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + GA++ A ++ + FGE +G+ FQLADD++D D
Sbjct: 176 ADKTGSLIAVSARYGAMLTDAGVRTEQIVEEFGERIGVAFQLADDVIDLMSDSA 229
>gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 330
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ASLLAPIAEDMQQVNRVIRHRLASEVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA++A A + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADARTEAAAAEFGRRIGTAFQIMDDWLDYTGTAE 229
>gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 338
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 85/234 (36%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L +L ++ L L +Q + + L A GGK++R L
Sbjct: 12 SANLVEELTSRMGEVEAQL-RLAVQVDDLVVDEATSHLAKA------GGKRLRPALCLLT 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + +A+ + MD +RRG P+ Y +AI+AG+
Sbjct: 65 AQL-GPRPASPDVLDSAVVVELTHLATLYHDDVMDEAPLRRGVPSAQYVYGNSSAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + + ++ +
Sbjct: 124 VLFARASGIVAKLGPEAVLLHAETFERLCMGQLH-------ETIGPREGEDPIQHHIQVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + G + + E + FG+ +G+ FQ+ADD++D D
Sbjct: 177 ADKTGSLIAASGRYGVLYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSDPE 230
>gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 356
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 15/236 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + ++ L + + + +A GGK+ R LV
Sbjct: 37 DEAFEAYVGDQLDAVERRLSAI------TLTAANPFLAEAAEHIIAAGGKRFRPMLVAVT 90
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L A AA+ + MD+ +RRG P+ + Y TAI+ G+
Sbjct: 91 SQL-GPQPNDAAAQIAAVVVELTHVASLYHDDVMDDAALRRGVPSANAAYGNSTAIMVGD 149
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +++ +T I +M Q +
Sbjct: 150 WLFARASNQVATLGNDFVRMQADTFAELVTGQI-------DEMRGPQPGHDAMLHYLNVV 202
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
KTGAL+ + GA+ + AS+ + L FG +G++FQLADDL+D D K
Sbjct: 203 AGKTGALIRTSAVFGAMTSGASREVLDALAQFGMQIGVVFQLADDLMDIMSDDSGK 258
>gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
Length = 371
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 64/251 (25%), Gaps = 23/251 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---YALLGGKKIRSFLVTECASL 64
L + + + L L + + + L GGK+IR
Sbjct: 15 DLDKFPEVVRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLA 74
Query: 65 FNVNHL----------------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + I S P++ +
Sbjct: 75 AQGHKNSSEKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNF 134
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
E + A + + ++GGQ+LDI
Sbjct: 135 EGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALARTRDAWRGMRTEVIGGQLLDIY 194
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E V + + + GA +A S + L +G ++GI FQL
Sbjct: 195 LESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLR 254
Query: 225 DDLLDCEEDLP 235
DDLL D
Sbjct: 255 DDLLGVFGDPA 265
>gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
Length = 323
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
E +RI L+ + AS T D L+ + + GGK++R+ L A+
Sbjct: 8 EMMERIALDLEGVERALASSFNTGSEDFNTLIRPL--SEAGGKRLRAQLCLLIANAGTSV 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+++ A+E +H +LIHDD+ +D IRRG+ T+H AI++G+ L AF
Sbjct: 66 EAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I+S I S ++ L +Q ++ D ++ +TQ KT
Sbjct: 124 RIVSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQ------KKTADF 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EED-LPK 236
M E G ++ S +E L+ +G LG+ FQ+ DD++D D K
Sbjct: 178 MEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGK 228
>gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group]
Length = 581
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 26/255 (10%)
Query: 1 MNGGLPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
M L ++ N + L LL +++ T++ + +A + GGK++R
Sbjct: 248 MESDLHQVIKANDDLTKEHYQFFLYQLLRAL-TYIHTENPVLVSAAEQIFGAGGKRLRPA 306
Query: 57 LVT----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
LV A L + LT A ++ +D+ +RRGK T+H Y
Sbjct: 307 LVFLVSRATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYG 366
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
A++AG+ + + +++ + + SQ++ Q + D +
Sbjct: 367 TRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQA------STLFDCDV 420
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE- 231
+ KT +L+ + S AI + S E++ +G NLG+ FQ+ DD+LD
Sbjct: 421 TLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQ 480
Query: 232 ----------EDLPK 236
DL K
Sbjct: 481 SAEQLGKPAGSDLAK 495
>gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
Length = 380
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + T + A+E +H +SL+HDDL MD RR + TV
Sbjct: 89 GGKAVRPALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 146
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T T L +
Sbjct: 147 KVHGPAQAILVGDALFALANEMLLELGTVEAGR---ATRRLTTATRALIDGQAQDISYEH 203
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 204 RDRVTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 263
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 264 GIWGDPDSTGKQ 275
>gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
Length = 330
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/224 (20%), Positives = 78/224 (34%), Gaps = 9/224 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ + L + LL +H + L Y GGK +R LV +L
Sbjct: 6 QEVKDALHERLLGHLTHPDPAYQALLQE---YPSRGGKMLRGLLVVYAGLAHGATLEASL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
G A+E + LIHDD+ D RRG+P +H Y A+ AG+ L + ++
Sbjct: 63 WAGTALELFQNWVLIHDDIE--DGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIR 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKMKTGALMCF 191
+ + G + + + + M+
Sbjct: 121 GLNEGLFGPEVLAEFHQVVHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVA 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA+++ + G LGI FQ+ DD+L+ E D
Sbjct: 181 PLRLGALLSGKTPP--ALYEEAGLKLGIAFQIMDDVLNLEGDQA 222
>gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
Length = 338
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L ++ ++ +L + S + A R+ + GGK+ R +V
Sbjct: 14 DPDLEKAVRVGLAAVEEMLRLSVHSEFSF--------VTEASRHLVDAGGKRFRPMVVLL 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + AIE H +L HDD+ MD +RRG + + ++ AI+ G
Sbjct: 66 AAQFADPEAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASANARWTNTVAILTG 123
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A EI + + I ++ + +L + + G + + + +
Sbjct: 124 DFLFARASEITADLGPE-ATRILARTIATLCEGQIRETVGPGPGQNQIEHY------LRV 176
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT +L+ + GA++A A + + L FGE G+ FQL+DD++D E K
Sbjct: 177 ITDKTASLIATSGRLGAMLAGADRVTADVLAAFGERFGVAFQLSDDIIDLASPTETSGK 235
>gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii]
Length = 303
Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
++ ID+ LD LL D + +A+R L GK+IR L+ A
Sbjct: 17 EQLLADIDSRLDQLLP------VQGERDCVGAAMREGTLAPGKRIRPMLLLLTARDLGCA 70
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++H L + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A LL+
Sbjct: 71 ISHGGLLDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSK 130
Query: 127 AFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I+ + R+ LS + + L D+ + + + KT
Sbjct: 131 AFGVIAEAEGLTPIAKTRAVSELSTAIGMQGLVQGQFKDLSEGDKPRSADAILLTNQFKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I A+AS +E L F +LG FQL DDL D D K
Sbjct: 191 STLFCASTQMASIAANASCEARENLHRFSLDLGQAFQLLDDLTDGMTDTGK 241
>gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
27-2-CHN]
gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
115-3-CHN]
gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
27-2-CHN]
gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
115-3-CHN]
gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
Length = 288
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + Q+ ID L+ L + + + Y++ GGK++R L
Sbjct: 1 MT-DFTNFYQKYQPIIDHYLEQHLSSE------IEDKKFSQIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+RV IE IH YSLIHDDLP+MDN RRG T H ++ E AI+
Sbjct: 54 ATLISLGKEITEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LL E I+S + + + + G + D E +
Sbjct: 114 AGDALLPMGLEWIASAENAEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNFINR- 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + E I A A +++L F N G +Q+ DDL+D
Sbjct: 173 -MEWLKTGCLIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDV 223
>gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium
glutamicum ATCC 13032]
Length = 366
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 64/251 (25%), Gaps = 23/251 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---YALLGGKKIRSFLVTECASL 64
L + + + L L + + + L GGK+IR
Sbjct: 10 DLDKFPEVVRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLA 69
Query: 65 FNVNHL----------------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + I S P++ +
Sbjct: 70 AQGHKNSSEKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNF 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
E + A + + ++GGQ+LDI
Sbjct: 130 EGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALARTRDAWRGMRTEVIGGQLLDIY 189
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E V + + + GA +A S + L +G ++GI FQL
Sbjct: 190 LESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLR 249
Query: 225 DDLLDCEEDLP 235
DDLL D
Sbjct: 250 DDLLGVFGDPA 260
>gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
Length = 325
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 10/221 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L L + T + + + GGK +R + + + + + AA
Sbjct: 16 ELASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAA 75
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H +LIHDD+ +D RR + T+ Q+ TA+ AG+ L F++++ + L
Sbjct: 76 IETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSL 133
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L M I KTG L +C GA
Sbjct: 134 RSIQQDSGSMEKILKGELDQMA-----TRYQTQITINDYLKQVSGKTGQLFALSCFIGAY 188
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + N + G N+GI FQL DD+LD D L K
Sbjct: 189 ESGGTTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGK 229
>gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
Length = 326
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 12/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+K+ + ++ L++ + + L + Y GK +R LV A LF
Sbjct: 4 NKIDLIKQPVEKELEEFRGLFEDSLTSTDP-LLGEVLAYIKKRSGKMMRPILVMLTAKLF 62
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + ++E +H SL+HDD+ +D RRG+ +V+ Y+ +++ G+ +L
Sbjct: 63 GTLNESTFHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLA 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + + + + L L+ LQ G+ E F + + KT
Sbjct: 121 TSLKHAALTGKVELVELVATLGQELSEGEILQLGNIGKED------FSEEAYFDVIRKKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL + +SGA+ A Q E + GE +GI FQ+ DD+ D E +L K
Sbjct: 175 AALFKASSQSGAVSVGAVQEEVMKAGLLGEMIGIAFQIKDDIFDYFESPELGK 227
>gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
Bath]
gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
Bath]
Length = 340
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
G+ + + +D+++ L + +Y + GGK++R L
Sbjct: 22 AGIRRLVDGEAAAVDSLILRELHSDVVLINQIG--------QYIVGSGGKRLRPMLHLLS 73
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A IE IH +L+HDD+ +D +RRG+ + + + +++ G+
Sbjct: 74 AKALGYPGDHHITLAAVIEFIHTATLLHDDV--VDESALRRGQDSANALWGNSASVLVGD 131
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + +FE++ + +I S+ ++ LQ + + DE + +
Sbjct: 132 YLYSRSFELMVRVQDMRVMDILSRTTTAIAEGEVLQLLNC------NNPATDEGRYLDVI 185
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + A++A +S +E L+ +G LGI FQL DD+LD + D
Sbjct: 186 SRKTAILFSAAAQLAAVLAGSSHAVEESLKNYGTYLGIAFQLKDDVLDYKADPE 239
>gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
Length = 323
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S ++ + K+ D IL + L + + + + GGK++R L+ CA
Sbjct: 5 SDIQSLIKLDLKKTDEILINRLSSNVALINQMSHYIIH-------AGGKRLRPLLLLLCA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ IE IH +L+HDD+ +D RRGK TV+ + +I+ G+
Sbjct: 58 RATGYQGTHHYLMAVVIELIHTATLLHDDI--VDESSTRRGKDTVNEVWGNAPSILVGDF 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFEI+ P I S+ ++ LQ + + + + + K
Sbjct: 116 LYSRAFEIMVEPNLMSIMCILSKTTNNIAEGEVLQLLNCQNDELTE------VEYYAVIK 169
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + G +++ ++ ++ L+ +G +LG FQ+ DD+LD E D
Sbjct: 170 QKTACLFQAATQIGGLLSAVNKTQETALKNYGLHLGNAFQIIDDVLDYESDAK 222
>gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 362
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 69/233 (29%), Gaps = 13/233 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQH---NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ++ L LL A+ + + R GGK++R L A V+
Sbjct: 24 RLVEARLGHLLDAEAARWRAIDERFAEPFDELSRLTRAGGKRLRPALAFWAARGLGVDGD 83
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------YDEVTAIIAG 120
L + ++ MD +RRG TVH + E
Sbjct: 84 DELLGDLLVAIELLHTFALVHDDIMDRSELRRGAVTVHARARDEHRSLKLRGEAETYGDA 143
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
G+L + + + + + G + Q E +
Sbjct: 144 IGILVGDLALTLADGALEAAPLPVRATFTQLKLEVNLGQYLDVVASAQLFDTPEHAEHIA 203
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ GA++A + L F LG+ FQL DD+L D
Sbjct: 204 LFKSAKYTVERPLHLGALLADPADGVLAALSRFALPLGLAFQLRDDVLGVFGD 256
>gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 313
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
N ++ I Y L GK +R L+ AS + + L +G A+E IH SL+HDD+
Sbjct: 5 NPQVEPIIDYLLESSGKMLRPRLLYLAASPYPHDPLMVRDMGVAVELIHLASLVHDDV-- 62
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D RRG+ +++ +Y+ T+++ G+ L AF +I+ + ++ + +
Sbjct: 63 IDQALTRRGQESINSRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQLMCQGE 122
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
Q + + E + + KT L +C GA ++ + L +G
Sbjct: 123 IKQL------SLAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYG 176
Query: 215 ENLGIIFQLADDLLDCEED---LPK 236
LG +Q+ DD+LD D L K
Sbjct: 177 LYLGYAYQIIDDILDLVADSQALGK 201
>gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 279
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 15/233 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + K ID + + ++ L A+ YA GK+IR +
Sbjct: 4 MNKKEFDRILNTDKKIIDQAMKEKF---------VGDNPLNEALVYASDSGKRIRPIVFL 54
Query: 60 ECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
E + + + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI
Sbjct: 55 ETCRMLLGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ LL++AFE I ++D + L G GM+ GQ+ DI+ +
Sbjct: 115 LVGDSLLSFAFENIL--NLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSY 172
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ K KT L A + + E+L + LG+ FQL DD+LD
Sbjct: 173 ILDVYKNKTSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILD 225
>gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 386
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 7/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + D ++ L ++ + LL Y GGK +R L
Sbjct: 15 LEDYLALCKETCDREIERL--YSSGRPGSGFEALLLD---YPRRGGKALRPALSIAVCLG 69
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L A +E H LIHDD+ + + + L
Sbjct: 70 LGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMHIDHGIPIAVNVGDAMLSL 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQK 182
+ + + + L +R ++ ++G + + + + M++
Sbjct: 130 SLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWVRSNAWRLDDADYLTMVEL 189
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++GAI A + E L G +LG FQ+ DDLL+ D
Sbjct: 190 KTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRHLGAAFQITDDLLNLRADPE 242
>gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
Length = 307
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 12/199 (6%)
Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+L Y + GGK++R L + L + IE IH SL+HDD+ +D
Sbjct: 26 ILEVGSYIISSGGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDV--VDG 83
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
RRG+ + ++ + ++ G+ + A + S I S+ ++ + L+
Sbjct: 84 ADRRRGRLSANLVFGNDLCVLTGDYMYAKALWLYSRYGDIKSIEIVSRAVMDMAQGQVLE 143
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
G ++D F I KTG L + GA+MA + ER G +
Sbjct: 144 LKSIGDIIDQ-------ETYFSIIDRKTGVLFGASMAVGALMAGR--EDYERFYQMGLKV 194
Query: 218 GIIFQLADDLLDCEEDLPK 236
G FQL DD LD K
Sbjct: 195 GRAFQLVDDALDYSGSEEK 213
>gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
Length = 289
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + + ++ + Y++ GGK++R L ++ +R+
Sbjct: 14 VIDDYLAKHLA--DEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSN 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
K + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAKLAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ A A+ E+ +L F + G +Q+ DDL+D
Sbjct: 191 AVYARATDIEQVKLVDFAKAFGRSYQIYDDLVDV 224
>gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
Length = 323
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + + +++ + L S + Y + GG K++R L
Sbjct: 1 MDFKAIQTLTANDMAKVNETIQAQLNSDVSLINQLGF--------YIVSGGGKRLRPLLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 LLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F+++++ + + S+ + + Q M + E
Sbjct: 111 VGDFIYTRSFQMMTTLGSLRILELMSESVNVIAEGEVQQLMNC------NNPDTTEESYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L A + GAI+ ++ + ++ +G+ LG FQL DD++D D K+
Sbjct: 165 QVIYSKTARLFEAATQIGAILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTAD-GKE 222
>gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 354
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 63 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 121 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQ---AQDISYEH 177
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 178 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 237
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 238 GIWGDPDATGKQ 249
>gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)]
gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)]
Length = 378
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 87 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQ---AQDISYEH 201
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 202 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 261
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 262 GIWGDPDATGKQ 273
>gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
Length = 323
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
E +RI L+ + AS T D L+ + + GGK++R+ L A+
Sbjct: 8 EMMERIALDLEGVERALASSFNTGSEDFNTLIRPL--SEAGGKRLRAQLCLLIANAGTSV 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+++ A+E +H +LIHDD+ +D IRRG+ T+H AI++G+ L AF
Sbjct: 66 EAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAF 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I+S I S ++ L +Q ++ D ++ +TQ KT
Sbjct: 124 RIVSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQ------KKTADF 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EED-LPK 236
M E G ++ S +E L+ +G LG+ FQ+ DD++D D K
Sbjct: 178 MEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDYRETSDTTGK 228
>gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 406
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 21/238 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNH 69
+ + L L S + ++ + +A + GGK++R LV A L +
Sbjct: 89 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
LT A ++ +D +RRGK TVH + A++AG+ + A
Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + SQ++ Q + D + + KT +L+
Sbjct: 209 YLANLENLEVIKLISQVIKDFASGEIKQA------SSLFDCDTKLDEYLLKSFYKTASLV 262
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + E++ FG+NLG+ FQ+ DD+LD DL K
Sbjct: 263 AASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAK 320
>gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana]
gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 406
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 21/238 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNH 69
+ + L L S + ++ + +A + GGK++R LV A L +
Sbjct: 89 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
LT A ++ +D +RRGK TVH + A++AG+ + A
Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + SQ++ Q + D + + KT +L+
Sbjct: 209 YLANLENLEVIKLISQVIKDFASGEIKQA------SSLFDCDTKLDEYLLKSFYKTASLV 262
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + E++ FG+NLG+ FQ+ DD+LD DL K
Sbjct: 263 AASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAK 320
>gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 343
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 18/231 (7%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ Q ++ + ++ + Y + GGK++R + ++ AL A +
Sbjct: 13 HEIDEQLIKYLNREVSEDFKDTVIYQVSTGGKRLRPLITLTATRACGSDYKVALPAAAIV 72
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH YSLI+DD+ +D +RR K TV +Y + AI+ G E I + +
Sbjct: 73 ELIHNYSLIYDDI--IDEALLRRNKLTVRAKYGDNAAILIGIWYREAIEEAILETRDPVS 130
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--------------DEFIDETQVFMIQKMKT 185
+ + +L + + +KT
Sbjct: 131 FARETARTIRAIDEGERLDILLEYSGRKDPYFVENRLGPRLLSNWESLYNTYIKMISLKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
AL+ + GA+ A+ + + + L +G LG+ FQ+ DD+LD D+ K
Sbjct: 191 AALIRASSVFGAMSAN-TPHCVKALSDYGTYLGLAFQVLDDILDIFGDVKK 240
>gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Streptomyces Coelicolor A3(2)
Length = 352
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 53 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 110
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 111 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQ---AQDISYEH 167
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 168 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 227
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 228 GIWGDPDATGKQ 239
>gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
Length = 406
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 89/224 (39%), Gaps = 21/224 (9%)
Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIH 83
S + ++ + +A + GGK++R LV A L ++ LT A
Sbjct: 103 KSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAALSELTTEHQRLAEIIEM 162
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++ +D+ +RRGK T+H Y A++AG+ + + +++ + +
Sbjct: 163 IHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLI 222
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
SQ++ Q + D + + KT +L+ + S AI +
Sbjct: 223 SQVIKDFASGEIKQA------STLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGMD 276
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 277 TTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAK 320
>gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 321
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 17/234 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L +++ I+ LD + ++ + A GGK++R L A L
Sbjct: 4 LKARIALELPAINRALDRAVEVLPEPVRPVT-RHIFEA------GGKRLRPLLTVLTARL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + +E +H +L+HDD+ +DN RRGKP H Y+ + I+AG+ LL
Sbjct: 57 LGHDREDIHDLAVTLEMLHAATLLHDDV--LDNAMSRRGKPAAHTLYNVSSVILAGDALL 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A ++ S+ L+ G++ + I + K
Sbjct: 115 AEANAQVARRGDPRLTRCFSEATSRTAAGEILEIAAQGRVDTSAGHY------EEIVRGK 168
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
T L+ ACE GA+ A A + +GENLG+ FQ+ DD LD E K
Sbjct: 169 TAWLIRAACEMGALAAEADEASVAAAAAYGENLGMAFQMVDDALDFAPESATGK 222
>gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 386
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 76/233 (32%), Gaps = 7/233 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L L + D ++ L ++ + LL Y GGK +R L
Sbjct: 15 LEDYLALCKETCDREIERL--YSSGRPGSGFEALLLD---YPRRGGKALRPALSIAVCLG 69
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L A +E H LIHDD+ + + + L
Sbjct: 70 LGGQLDAILPTAATLELYHNAFLIHDDIEDESWWRRGKPTMHIDHGIPIAVNVGDAMLSL 129
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQK 182
+ + + + L +R ++ ++G + + + + M++
Sbjct: 130 SLQPLLDNVERIGLGPALRILRAVAHMTRRTVEGQAIELEWVRSNAWRLDDADYLTMVEL 189
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++GAI A N E L G +LG FQ+ DDLL+ D
Sbjct: 190 KTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRHLGAAFQITDDLLNLRADPE 242
>gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus]
Length = 337
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GK +R L A AL A+E +H +SL+HDDL MD RR +
Sbjct: 49 SADAGKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRR 106
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
TV + +AI+ G+ LL A E++ L + H I Q
Sbjct: 107 TVWKLWGSSSAILTGDALLALAQEVLLDTGLPTAAPAARLLARTTRHLIRGQVQDLAFEQ 166
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + KTGAL+ + GA++A A + + L +G+ +G+ FQL D
Sbjct: 167 RSHVTV---EECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVD 223
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 224 DVLGIWGDPA 233
>gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-1A-US]
gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-3A-US]
gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-1A-US]
gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
MV-3A-US]
Length = 289
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
I+DD L + + + ++ + Y++ GGK++R L + +R+
Sbjct: 14 IIDDYLAKHLA--SEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSN 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAQLVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
AI A AS EK +L F + G +Q+ DDL+D
Sbjct: 191 AIFAKASDIEKVKLIDFAKVFGRSYQIYDDLVDV 224
>gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 322
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
++ ++++ ++ + + ++Y + GGK++R L A +
Sbjct: 10 KDMEKVNFLILKRICSDVEMIP--------DVVKYLIFSGGKRLRPMLTLATALMLEYRG 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + AIE IH +L+HDD+ +D+ +RRGK + + T+++ G+ LL+ AF
Sbjct: 62 DNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFC 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ K+Q L Q+ ++ + E + K KT L
Sbjct: 120 MVIETKSQEALE------ALSLVACTLAEGELRQLSLSKNLDVTEEDYLHVIKSKTAVLF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A E +++A + ++ L+ +G NLGI FQL DD+LD +
Sbjct: 174 SAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGE 217
>gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium]
Length = 328
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + +++ K+ D+ + + + +N + GK++R L A L
Sbjct: 11 IKAPIEKEMKQFDSYFKESMKSKVRLLDIINNYIIK-------RKGKEVRPILTFLSARL 63
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A + +H +LIHDD+ +D Y RRG +++ + A++ G+ LL
Sbjct: 64 LGDIQESTYVAAALTQLLHTATLIHDDV--VDEAYERRGFFSINALWKSKAAVLVGDYLL 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ + K + + S + ++ LQ ++ +D + D I K
Sbjct: 122 SKGLLVALENKEYDQLQVVSDAVREMSEGELLQLEKSRKLDITEDVYFD------IIYKK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
T +L+ + GA+ A+++++E+L+ FGE LG+ FQ+ DDL D E ++ K
Sbjct: 176 TASLIASCTQLGALSVGATKDQQEKLKRFGECLGVAFQMKDDLFDYEKQGNIGK 229
>gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
Length = 320
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 10/221 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L L + T + + + GGK +R + +V+ + + AA
Sbjct: 11 ELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAA 70
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H +LIHDD+ +D RR + T+ Q+ TA+ AG+ L F+++S + L
Sbjct: 71 IETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL 128
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L M I KTG L +C GA
Sbjct: 129 RSIQQDSGSMEKILKGELDQMA-----TRYQTKITIDDYLKQVSGKTGQLFALSCFIGAY 183
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S + G N+GI FQL DD+LD D L K
Sbjct: 184 ESGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 224
>gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae]
Length = 337
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 5/190 (2%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GK +R L A AL A+E +H +SL+HDDL MD RR +
Sbjct: 49 SADAGKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRR 106
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
TV + +AI+ G+ +L A E++ + L + H I Q
Sbjct: 107 TVWKLWGPSSAILTGDAMLALAQEVLLDTGLPTAASAARLLARTTRHLIRGQVQDLAFEQ 166
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + KTGAL+ + GA++A A + + L +G+ +G+ FQL D
Sbjct: 167 RSHVTV---EECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVD 223
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 224 DVLGIWGDPA 233
>gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa]
gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa]
Length = 420
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 21/236 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLT 71
+ L L S + ++ + +A + GGK++R LV A + + LT
Sbjct: 105 VADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEVVGMKELT 164
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A ++ +D +RRGK TVH Y A++AG+ + + +
Sbjct: 165 TEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYL 224
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + + SQ++ Q + D ++ + + KT +L+
Sbjct: 225 ANLENIEVIKLISQVIKDFASGEIKQA------SSLFDCDVELEEYLIKSYYKTASLIAA 278
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + ++ +G+NLG+ FQ+ DD+LD DL K
Sbjct: 279 STKGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAK 334
>gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 323
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 17/228 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ + + ++ ++ L S + Y + GGK++R L A
Sbjct: 5 TIRALCAADMTAVNELILARLQSDVSLINQLGF--------YIVSAGGKRMRPMLTVMAA 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L++ A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 57 RALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETANALFGNAASVLVGDY 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++S I S ++ LQ M + +
Sbjct: 115 LYSRSFQMMSELSNLRVMEILSDATNTIAEGEVLQLMNCNDPDTTE------ESYMTVIY 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L A A++ H + ++ + +G+ LG FQ+ DD++D
Sbjct: 169 CKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVMDY 216
>gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS)
(dimethylallyltransferase) [Arabidopsis thaliana]
Length = 322
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 10/224 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLT 71
+ L L S + ++ + +A + GGK++R LV A L + LT
Sbjct: 7 VADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELT 66
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ +D +RRG+ TVH + A++AG+ + A +
Sbjct: 67 VEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYL 126
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ + + SQ++ Q D+++ ++ KT +L+
Sbjct: 127 ANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKS------YYKTASLVAA 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + AI + E++ FG+NLG+ FQ+ DD+LD +
Sbjct: 181 STKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTE 224
>gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens
ATCC 23877]
Length = 354
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 9/233 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLL------SAIRYALLGGKKIRSFLVTECA 62
L + L++ + + + R A GGK +R L A
Sbjct: 20 LNRCRALVRPALEEAVGRLHPWVGEMAAYSFGWCEVGGEPARDA-RGGKGVRQALAVLGA 78
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A+E +H +SL+HDD+ MD RR +P V Y A++AG+
Sbjct: 79 EAAGASGRAGVPAAVAVELVHAFSLLHDDI--MDGDPDRRRRPAVWKAYGTGPAVLAGDA 136
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L A E ++ + L+ +L + E + + + +
Sbjct: 137 LFALAVETLAVAPAGPRTVRLLSTALNDLVRGQADDLLFAERPWTGPERVRPHEYRAMAE 196
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ A GA++ A + L G LG+ FQ+ DD+L D
Sbjct: 197 HKTGSLLGCAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVVDDVLGIWGDPA 249
>gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 12/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
S+L E I+ L + + + + + L+ AIR+ GK +R LV A LF
Sbjct: 2 SQLTEIRYPIEQELAEFQQIFDNSLTSSNP-LLMRAIRHIRKSNGKMMRPILVLLLAKLF 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L ++E +H SL+HDD+ +D RRG+ +V+ ++ +++ G+ LL
Sbjct: 61 GSIKTNTLYSAVSLELLHTASLVHDDV--VDESDERRGQLSVNALFNNKVSVLVGDFLLA 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + + ++ + L +L LQ ++ ++ E + + KT
Sbjct: 119 TSLVQVGLTRDCDIIDVVAHLGQNLADGEILQL------SNVSNKEFSEDVYYSVIYKKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
AL + A+ A AS+ FGE LGI FQ+ DD+ D + K
Sbjct: 173 AALFAACAKVAALSAGASKESVIEATKFGEYLGICFQIKDDIFDYSDSSSIGK 225
>gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24]
Length = 342
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 51 GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQ---AQDISYEH 165
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 166 RDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 225
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 226 GIWGDPDATGKQ 237
>gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
DSM 18315]
gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 11 ENSKRIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++ +I+ + A+ ++++ N RL SAI L GK IR LV A
Sbjct: 2 KDRSKIEQPVAVEFKRFNDEFAASLRSETN-RLQSAIDQILNASGKHIRPLLVLLAAKAC 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+
Sbjct: 61 GQVTDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A +I S +T I L + G Q+ ++ IDE+ + + KT
Sbjct: 119 TA--LIRSIQTGNLQIIGIVSNLGRDLSEG----EIKQLETAEESIIDESCYMQVIRKKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
L+ E G+I A AS E+ R FGE LG FQ+ DD+ D ++ K
Sbjct: 173 AMLLSACSEIGSISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFKEANIGK 225
>gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter hominis ATCC BAA-381]
gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter hominis ATCC BAA-381]
Length = 284
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 7/222 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH-L 70
+ + L + + A+ Y L GGK R+ L
Sbjct: 7 LENFENYLRE-----NPIKAPSFHPYFEEALNYMLFAGGKHFRAQLCLGVVETMAPKKLS 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ + AIE IH YSLIHDDLPS+DN RRG T+H +YDEV+AI+ G+ L T AF
Sbjct: 62 KAMPIALAIEMIHTYSLIHDDLPSVDNADFRRGIATIHKKYDEVSAILVGDALNTEAFYR 121
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
IS I+ +LS + + + ++ +QV + ++KTGAL+
Sbjct: 122 ISRADLNDNIKIKCVEILSKNAGSAGMVLGQAIDCFFEKKQLEISQVEFLHRLKTGALIG 181
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA ++ + + +++ G LG+ FQ+ DDL+D
Sbjct: 182 ASLALGATISEIPKEKTDKIYEIGLKLGLAFQINDDLIDATS 223
>gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii
PYR-1]
Length = 359
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 78/254 (30%), Gaps = 20/254 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIR-YALLGGKKIRSFL 57
M+ PS + E + + L D L L A+ + L GGK++R
Sbjct: 1 MDASAPSAV-ELAAAVTEQLRDYLRARRRDAAYIGAGYAVLTEAVEEFVLRGGKRLRPAF 59
Query: 58 VTECASLFNVNHLTA------------LRVGAAIECIHCYSLIHDDLPSM----DNGYIR 101
+ + S LP++ +
Sbjct: 60 AYWGWRAVAGTEPGPEALRLFSALELLHACALVHDDVIDASATRRGLPTVHRIFAERHRS 119
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
Q+ AI+ G+ L +A +I++S + ++ + R Q + + L G
Sbjct: 120 NNWLGSSEQFGLSAAILLGDVALVWADDIVASAEIGVEAHRRVQRVWAAIRTEVLGGQYL 179
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + + + + + + GA A G +LG+ F
Sbjct: 180 DIVNEATGAETVASALTVNIYKTASYTISRPLQLGAAAAADCPEVLSAFHELGTSLGVAF 239
Query: 222 QLADDLLDCEEDLP 235
QL DD+L D
Sbjct: 240 QLRDDVLGVFGDPA 253
>gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 363
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 29/257 (11%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
P ++ S+R+D L D L +S + + A +L GGK++R+
Sbjct: 5 PEPIEAVSQRLDKFLSDQLSYASSLGP--EAETMSRAGAASLRGGKRLRARFCLTGWRAV 62
Query: 66 NVNHL------------------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
+ + I S P+
Sbjct: 63 AESTAARTVAPAAAAISVAAALEIFQAAALVHDDIIDNSDTRRGQPAAHRALEAAHAAAH 122
Query: 108 HIQYDEVTAIIAGN--------GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+ + ++ T M +
Sbjct: 123 WAGDAAMFGRSGAVLLGDLLVAWSDDLLEDALADQPTASATRRLYAHMRRDVTIGQFLDV 182
Query: 160 LGGQMLDIQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + + + + E GA +A A ++ + L FG ++G
Sbjct: 183 AEESAYAVYPDDQHAERALRVASYKSARYSIQKPLEIGAALAGADDDQLDALARFGHDVG 242
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQL DD+L D
Sbjct: 243 MAFQLRDDVLGVFGDTA 259
>gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 287
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + I+ L+ L + + + R + Y++ GGK++R L
Sbjct: 1 MT-TFKEFQAKYTPIINDFLEGQLAKES------DDPRFAEIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
V + IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+
Sbjct: 54 ATLDALGVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L + I+ + K +++ G+ + +E E +
Sbjct: 114 AGDALQPLGIQWIAQAEHNWKL---VEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVID 170
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D
Sbjct: 171 HMEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDI 222
>gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
Length = 323
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + E+ ++ + L + + Y + GG K+IR +
Sbjct: 1 MNLESIVELTSEDMSAVNEAILSQLNSDVALINQLGY--------YIVSGGGKRIRPMIA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ ++V A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAGRSLGYSGQKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTANAVFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++ + + S+ + LQ M ++ ++
Sbjct: 111 VGDFIYTRSFQMMTDLDSMRVLKLMSEATNVIAEGEVLQLMNCNDPNITEENYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A + AI+A A+ +++ L+ +G LG FQL DDLLD + D L
Sbjct: 166 -VIYSKTARLFEAAAHASAILASATPEQEKALQDYGRYLGTAFQLIDDLLDYDADNKQLG 224
Query: 236 K 236
K
Sbjct: 225 K 225
>gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 286
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ ++ + L L S N + +GGK+ R L+
Sbjct: 4 KAIVEKFEAFLKRELPVVESF-HPHFNQAFGEMLD---VGGKRFRPLLLLSVVEASAPLL 59
Query: 70 LTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V +E +H YSLIHDDLP MDN +RRG PT+H+ YDE TA++ G+ L T+AF
Sbjct: 60 FENALHVSLGLEMMHTYSLIHDDLPCMDNAALRRGHPTLHVTYDETTAVLIGDALNTHAF 119
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I++ + +R +L+ I + +D+ +D Q+ + KT L
Sbjct: 120 YRIANAPLSAEIKVRLVSILAGDAGIYGMVLGQALDCFFEDKRLDVEQLSFLHVHKTAKL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + GA++ + +E + FG LG++FQ+ DD++D
Sbjct: 180 IAASLLMGAVICELDKATQETVYAFGLRLGLLFQIQDDIIDAT 222
>gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118]
Length = 289
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + + ++ + Y++ GGK++R L + +R+
Sbjct: 14 VIDDYLAKHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ A A+ E+ +L + + G +Q+ DDL+D
Sbjct: 191 AVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDV 224
>gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 320
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 20/238 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ ++ + +D ++ L + + Y + GG K++R LV
Sbjct: 2 EQFYNLIELDMTAVDAVIRRRLHSDIA--------LVRQVAEYIIQGGGKRLRPALVLLA 53
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A IE IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 54 AGALDYRGTHHHELAAVIEFIHTATLLHDDV--VDGSDLRRGRDTANAIFGNSASVLVGD 111
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + AF+++ + + S + LQ M D +DE +
Sbjct: 112 FLYSRAFQMMVAVDDMRVMRVLSDATNVIAEGEVLQLMNC------HDADVDEAGYLQVI 165
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ KT L A + GAI+ S ++ + +G +LG FQL DD+LD + K
Sbjct: 166 RYKTAKLFEAAAQLGAIIGGGSAAAEQGMATYGIHLGTAFQLIDDVLDYSGAEVETGK 223
>gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
Length = 331
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
++ L L ++ +L + + + A R+ + GGK+ R+ LV
Sbjct: 12 VDERLAEDLATGLAEVERMLRASVESEDAF--------ITEAARHVMEAGGKRFRAMLVL 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + IE H +L HDD+ MD +RRG P+ + ++ + AI+
Sbjct: 64 LAAQFGDPKAPAVVPGAVVIELTHLATLYHDDV--MDQAPMRRGLPSANARFGDTVAILT 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L A EI++ + ++++ L + + + T
Sbjct: 122 GDYLFAQASEILADLGAE-AIRVQARTFSRLVRGQIRETI------GPPEGMDPITHYLQ 174
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KTG+L+ + GA+++ A + ++RL E +G+ +QL DD++D D K
Sbjct: 175 VLADKTGSLIATSGRFGAMLSGAPREVEDRLAGACEAIGVAWQLGDDIIDVVSDGSVSGK 234
>gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
Length = 323
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLEHVEESLASSFNTVAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + S ++ L +Q ++ + ++ +TQ KT M
Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E G ++ ++E L+ +G LG+ FQ+ DD++D
Sbjct: 180 GCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219
>gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
Length = 295
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLT 71
RI+T + + +L SA+ YA+ GG +IR ++ AS +
Sbjct: 5 ARIETAIQSAIA---GGQTAPSPGKLASALHYAVTPGGARIRPTILLSVASACGDDMPKL 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A AA+E IHC SL+HDDLP D+ RRGKP VH + E A++ G+ L+ AF ++
Sbjct: 62 ADAAAAALELIHCASLVHDDLPCFDDADTRRGKPAVHRAFGEPLAVLTGDSLIVMAFTVL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
TQ ++ + + GM G E D+ + + KTGAL
Sbjct: 122 ----TQSAHLHPTRAIELMKVLAERTGMPNGICAGQGWESEDQIDLSAYHRAKTGALFIA 177
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A + GAI A G +G FQ+ADDL D D L K
Sbjct: 178 ATQMGAIAAGQDG---APWDELGARIGEAFQVADDLRDALYDQATLGK 222
>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ ++ + + M + + + +A+R+A+L G K+ L L
Sbjct: 48 SLISEVEGELDAAMPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 107
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL AA+E +H SL+HDDLP D RRG+P+ H Y A++AG+ L A+
Sbjct: 108 AALPTAAALEMLHGASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167
Query: 131 I---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTG 186
+ + + + +++ L +G GM GQ + E +V + K G
Sbjct: 168 VISRTPSPDPVSHAVLLRVLAELARTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFG 227
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA++ A +E+ LR +G +G++++L DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRAIGVLYELVDDM 268
>gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
Length = 319
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 81/227 (35%), Gaps = 16/227 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
S L+ + L +L+ ++ +D + GGK++R L +
Sbjct: 7 TSDLEPLLNTFEEYLRELVRSDVEFIRLIEDDLV-------TAGGKRVRPQLAFLASRAL 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ +S +D+ RRG +Y +++AG+ LL+
Sbjct: 60 GGVPYEME---LALAVELLHSTTLLHDDLVDDAETRRGHVAAFRKYGNAVSVLAGDYLLS 116
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
++S + S++ L + LQ + I KT
Sbjct: 117 RLLYLLSITGRMELVYMFSEVARELAESEVLQFQIAALGDYSF------EAYERIITGKT 170
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+LM ACE A++ +A ++ L FG G FQ+ DD LD
Sbjct: 171 ASLMRLACEGAAVLGNAPSEWRQALADFGLFYGQAFQMRDDYLDLMG 217
>gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 287
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + I+ L+ L + + + R + Y++ GGK++R L
Sbjct: 1 MT-TFKEFQAKYTPIINDFLEGQLAKES------DDSRFAEIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
V + IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+
Sbjct: 54 ATLDALGVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L + I+ + K +++ G+ + +E E +
Sbjct: 114 AGDALQPLGIQWIAQAEHNWKL---VEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVID 170
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D
Sbjct: 171 HMEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDI 222
>gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
125-2-CHN]
gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
125-2-CHN]
gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
Length = 289
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + + ++ + Y+++GG K++R L + +R+
Sbjct: 14 VIDDYLAKHLA--SEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSK 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
K + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A+ A AS E+ +L F + G +Q+ DDL+D + K
Sbjct: 191 AVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGK 233
>gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
Length = 325
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 10/221 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L L + T + + + GGK +R + +V+ + + AA
Sbjct: 16 ELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAA 75
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H +LIHDD+ +D RR + T+ Q+ TA+ AG+ L F+++S + L
Sbjct: 76 IETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL 133
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L M I KTG L +C GA
Sbjct: 134 RSIQQDSGSMEKILKGELDQMA-----TRYQTKITIDDYLKQVSGKTGQLFALSCFIGAY 188
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S + G N+GI FQL DD+LD D L K
Sbjct: 189 ESGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 229
>gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
DW4/3-1]
Length = 366
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECA 62
+ LQ +I+ L +L + + R A+ YAL K++R LV
Sbjct: 25 TWLQLVQAQIEASLAELFELPD---EACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGY 81
Query: 63 SL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTA 116
L + A ++ + D +RRG +H + E A
Sbjct: 82 HLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDVADRADLRRGGAALHHLLAPGRAGEDLA 141
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L A E + + + H Q + +
Sbjct: 142 VVVGDHLFARAMEAMLGSGLRGAAKACQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQA 201
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + C GAI+A A + + L G G+ +QL DD+L D
Sbjct: 202 LRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGDARM 261
Query: 234 LPK 236
K
Sbjct: 262 SGK 264
>gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
Length = 329
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 11/227 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF-- 65
L K ++ L+ L + YAL GK IR V A+L
Sbjct: 4 LDMIRKPVEGDLEAFEQFIRQKFTADG-TLLSEMLDYALSARGKGIRPMTVLLSAALNAP 62
Query: 66 -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ AA + +D +RRG+ +V+ ++ A++ G+ +L
Sbjct: 63 AGQRSGGLRALLAATLVEMIHVASLIHDDVIDESDMRRGRASVNARWQSRNAVVVGDYIL 122
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
++ + +L LQ + + I K
Sbjct: 123 AKNMDLGLKSGQFDLVTHVCGAIATLCEGEILQN------DKANRQEMTRASYLDIIYKK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
T L+ + +GA+ AS+ ++ +R FGE++G+ FQ+ DD+LD
Sbjct: 177 TACLIGVSASAGALAVGASREKQALMRKFGESIGMAFQIQDDILDYT 223
>gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
705]
gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
705]
gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
Length = 325
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 10/221 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L L + T + + + GGK +R + + + + + AA
Sbjct: 16 ELASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAA 75
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H +LIHDD+ +D RR + T+ Q+ TA+ AG+ L F++++ + L
Sbjct: 76 IETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSL 133
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L M I KTG L +C GA
Sbjct: 134 RSIQQDSGSMEKILKGELDQMA-----TRYQTQITINDYLKQVSGKTGQLFALSCFVGAY 188
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + N + G N+GI FQL DD+LD D L K
Sbjct: 189 ESGGTTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGK 229
>gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
Length = 336
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 6/227 (2%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ I L D L + + + + Y GGK +R L+ + +
Sbjct: 8 AQVRAAIQQYLLDALPKPEAATRLELAQFARMLRDYPERGGKMLRGTLLVYTGLAYGASL 67
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L V AA+E ++LIHDD+ D RRGKP +H Y A+ AG+ L +
Sbjct: 68 EGVLPVAAALELFQNWALIHDDIE--DASDERRGKPALHKLYGVPLALNAGDALHARQWA 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + M+ T M + D ++ + +
Sbjct: 126 LLVEAGASRAVLLEFVRMVEQTAQGQHLEMSWMEGQRFDLGEPDYLEM--VGQKAAYYTA 183
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ A A G LGI FQ+ DD+L+ D K
Sbjct: 184 VAPLRLGALAAGAEPPAI--FSEAGLKLGIGFQIVDDVLNLMGDPAK 228
>gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 323
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 10/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
++ K I+ + + ++ + + + D + +Y L GK IR + A
Sbjct: 3 FEKIFKLINKDIINFQIELERSLYS-NVDLIKKCNKYILNNNGKFIRPIAIILAAKSLFY 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + + + IE IH +L+HDD+ +D+ RRG +V++ + + I+ G+ + T A
Sbjct: 62 NKKKHIILASLIELIHMSTLLHDDI--IDDAKKRRGNASVNVVFGNIPTILIGDFIYTRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F++IS ++ I S + + LQ + ++ I KT
Sbjct: 120 FQMISKLRSFKIFKIISNAVNMIVEGEILQLTYCNSVDITIKNYMQ------IIYKKTAK 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L + +S AI++ +S E++ + +G LGI FQ+ DD LD + D K
Sbjct: 174 LFEVSLQSAAILSKSSYKEEQAFKNYGRYLGISFQIIDDFLDYKSDFKK 222
>gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 342
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 21/248 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG----------- 49
M + L+E S D + +L RL + Y L
Sbjct: 1 MVDTVTPILEEYSAYTDRQMRAVLNNRKRV------GRLYDMMMYHLGWLDEDFRECRAP 54
Query: 50 -GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK +RS + + + AL AA+E +H +SLIHDD+ D RR + T+
Sbjct: 55 RGKSLRSTMCLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIE--DGDVKRRHRDTLW 112
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI G+ + A + ++ + ++ + +D Q
Sbjct: 113 KLWGVPQAINTGDAMDIAANLSLLDLDGTVEPGMMVDIIRIFNQTVIELCEGQYLDMDFQ 172
Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + KT AL+ + GA++A ++ R FG +GI FQ+ DD+
Sbjct: 173 GRSDVSVGEYITMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQIRDDI 232
Query: 228 LDCEEDLP 235
L D
Sbjct: 233 LGIWGDPE 240
>gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 395
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 15/246 (6%)
Query: 1 MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
M LP L++ D +++ + N + Y L GGK
Sbjct: 2 MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGSGERGSNGLYQLILDYPLRGGK 61
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R L + L A +E H LIHDD+ D + RRGKPT+HI +
Sbjct: 62 ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDH 119
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL----QGMLGGQMLDI 167
A+ G+ +L+ + + + ++ +++ ++ Q + +
Sbjct: 120 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 179
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
D + M++ + ++GA+ A ++ + L G +LG FQ+ DDL
Sbjct: 180 TWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLESLGRHLGAAFQITDDL 239
Query: 228 LDCEED 233
L+ D
Sbjct: 240 LNLRAD 245
>gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
Length = 330
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ I L + LL H + D L Y GGK +R L A L
Sbjct: 6 EAIRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E + L+HDD+ D RRG+P +H + A+ AG+ + + +++
Sbjct: 63 EAATALELFQNWILVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCF 191
+ L G + + F + M+
Sbjct: 121 GLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVA 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A + G LG FQ+ DD+L+ E
Sbjct: 181 PLRLGALLAGKTPP--AAYEEGGLRLGTAFQIVDDVLNLEG 219
>gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 347
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 13/239 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFN- 66
RIDT L + + ++ + + +R A+ GK+IR+
Sbjct: 5 AALKSRIDTELRAFVREETGLLEAVDPLLAPVGAQLRAAVADGKRIRAAFCYWGWRAAGQ 64
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMD-------NGYIRRGKPTVHIQYDEVTAIIA 119
+ +R AA+E +H +L+HDDL ++ + T + A
Sbjct: 65 GDTPAMVRAAAAMELVHAAALVHDDLIDDSLLRRGVPTPHVALREATAKAPDPDGAARSL 124
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
+ T ++ + ++ G+ L+ D +
Sbjct: 125 ALLVGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLARELIAGECLEVLRTGTETDPQES 184
Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KT + + G + AS +G LG FQL DDLL D
Sbjct: 185 LTIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLLAVFGDPA 243
>gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 309
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D ++ L + + Q + +++A GGK++R L+ A
Sbjct: 1 MREVDIVIAQRLTTSVPLI-AQISQYIIAA------GGKRLRPALLLLIAGALGHQGKNK 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L T +F+++
Sbjct: 54 YILAAVVELIHTATLLHDDV--VDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I S + Q + + D ++E + + KT L +
Sbjct: 112 EVGSMRVLQILSDATNVIAEGEVQQLI------NTHDASLNEAGYLHVIRSKTAQLFEAS 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ A++A A+ ++ +G+ LG FQ+ DD+LD ++ K
Sbjct: 166 AQLAAVLAGATPEMEQACATYGQALGTAFQIIDDVLDYTGNAQEMGK 212
>gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
Length = 289
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M ++ + I+ L+ L + ++ + Y++ GGK++R L
Sbjct: 1 MTA-FKYFQKQWTPVINEYLNKHLANEV------DDQKISQIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ +R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E +I+
Sbjct: 54 ATLNTLGKEITEDEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LL + I+ + + +G Q + + + +
Sbjct: 114 AGDALLPMGIQWIAEGSKSAELVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKF-IN 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + + A++ ASQ E+ +L F + G +Q+ DDL+D
Sbjct: 173 RMEWLKTGCLIEASVKMAAVLVGASQIEEVKLVDFAKVFGRSYQIYDDLVDV 224
>gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 337
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ R++ ++ + + + S GGK++R L A +
Sbjct: 26 DMARVNDLILAMAGSNVELIPEIAEHLISS-------GGKRLRPMLTIASALAHDYRGDA 78
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+++ A++E +H +L+HDD+ +D +RRGK T + +++ G+ LL AF+ +
Sbjct: 79 HVKLAASVEFMHTATLLHDDV--VDESDLRRGKKTARTIWGNQASVLVGDFLLGQAFKTM 136
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ +I S + Q + E + KT AL
Sbjct: 137 VEVGSLTALDILSTASSVIAEGEVWQL------SAAKHMTTSEADYLAVIDAKTAALFAA 190
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A E G ++A A + E+ +R +G +LG+ FQL DD+LD
Sbjct: 191 AAEVGPVIAGAGEAERTAMRDYGRSLGLAFQLVDDVLDYGG 231
>gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
[Ferroplasma acidarmanus fer1]
Length = 330
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 79/229 (34%), Gaps = 19/229 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
L++ +++ L + L +Y + GGK+ R L + N
Sbjct: 11 LRDKINEVNSRLLQAI--------KTDQPYLFEMSKYTIDAGGKRFRPLLTILSYEISCN 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + L + + E IH SLIHDD+ R D + L
Sbjct: 63 EPYDSILDLASGYELIHTASLIHDDIIDKSKYRRGRETLASRYGIDNAIVV---GDYLFA 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ S ++ + + L ++ + G + + + I KT
Sbjct: 120 KAYELGSRYGKVVSKVMADGSSHLAEGQIIEALNIGNLSLDIETYNK------IIMNKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E I A A N +++L F N+G+ FQ+ DD+LD +
Sbjct: 174 YFFSACAEGATIAAMAPDNVRDKLSKFAYNMGMAFQITDDILDIVGNEK 222
>gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
From Thermus Thermophilus
gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
Length = 330
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ I L + LL H + D L Y GGK +R L A L
Sbjct: 6 EAIRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E + L+HDD+ D RRG+P +H + A+ AG+ + + +++
Sbjct: 63 EAATALELFQNWVLVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCF 191
+ L G + + F + M+
Sbjct: 121 GLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVA 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A + G LG FQ+ DD+L+ E
Sbjct: 181 PLRLGALLAGKTPP--AAYEEGGLRLGTAFQIVDDVLNLEG 219
>gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
Length = 324
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 6/213 (2%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ ++ L + Y L LGGK++R L+ LF + A++ AIE H
Sbjct: 13 QEINTYSYPSSPRNLYEPVSYLLGLGGKRLRPALLLLATDLFGGDVEKAVKPAMAIEFFH 72
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+SL+HDD+ MD +RRGKPTVH ++ + TAI++G+ +L A+++I +
Sbjct: 73 NFSLMHDDI--MDKAPLRRGKPTVHEKWSDSTAILSGDIMLIEAYKLICEVEAVKLPACL 130
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
T Q M M ++EF+ + + ++KT L+ A + GA++A AS
Sbjct: 131 KIFNTISTEVCEGQQM---DMNFEKEEFVSIEEYIEMIRLKTAVLLGGALKIGAVIADAS 187
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+N++E + FG LG+ FQL DD+LD D K
Sbjct: 188 ENDQELINDFGTKLGVAFQLQDDILDVYGDPEK 220
>gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
Length = 326
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 76/225 (33%), Gaps = 8/225 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALR 74
I+ L + + ++ + + + GGK +R L A L ++
Sbjct: 11 IEQRLKTVCSIIEERVTVRNKEIQDVLVDFTYSGGKMLRPALFFLFADLGEPIDERNDQL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A + +D+ +RRG+ TV +Y + A+ G+ L T FE++
Sbjct: 71 TKIAASLEILHMATLIHDDIIDDSPLRRGRITVQAKYGKDIAVYTGDLLFTQFFELLIES 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L M + KT L AC
Sbjct: 131 MNGSHFLATNAQAMKRLLLGELDQMH-----TRYNIDESIADYLQSINGKTAELFWLACI 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GA +ER G N+GI FQ+ DD+LD D KK
Sbjct: 186 EGAHFGGLDLENQERAGEIGRNIGIAFQVFDDILDYTADSGTLKK 230
>gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 373
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 82/260 (31%), Gaps = 39/260 (15%)
Query: 15 RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTE------------ 60
+ T LDD L A+ ++ D + L GGK+ R+
Sbjct: 10 HVQTRLDDFLTAQAAGLREISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69
Query: 61 CASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNG--------------YIRRG 103
V A +E H +LIHDD+ + + G
Sbjct: 70 AGRPQGEERPGYRAVVGVAAGLEIFHAAALIHDDIIDRSDTRRGRPAAHRRFEALHAASG 129
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----- 158
+ E A + G+ LL ++ E++ L D ++ + + Q
Sbjct: 130 WGGSSAGFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELATMRTQVTLGQY 189
Query: 159 ---MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ + ++ +I + GA +A A+ + LR G
Sbjct: 190 LDVLEEVAWPTVPEDDTLARAHNVIVYKSAKYSIEAPLVVGASLAGATPEQVAALRAVGL 249
Query: 216 NLGIIFQLADDLLDCEEDLP 235
LGI FQL DD+L D
Sbjct: 250 PLGIAFQLRDDVLGVFGDSA 269
>gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 357
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 18/230 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
+ + + + ++ L + RY L GGK++R L
Sbjct: 30 DRRMARSIDDGLALVEEQLLREVRFADDVADVTT--------RYLLAAGGKRVRPMLALL 81
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L N + AIE H SL HDD+ MD +RRG P+ + AI+AG
Sbjct: 82 IAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRRGVPSAQAVWGNSVAILAG 139
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +I++ + + + + + + +D+ +
Sbjct: 140 DLLFARASKIVADLGPRAIRLQAATFERLVLGQLH-------ETIGPRDDQDPIEHYLDV 192
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTG+L+ A + G I + A + + FGE G+ FQL DD+LD
Sbjct: 193 LADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGVAFQLVDDVLDL 242
>gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
BL23]
gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
BL23]
gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W]
gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II]
Length = 325
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 10/221 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L L + T + + + GGK +R + +V+ + + AA
Sbjct: 16 ELASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAA 75
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE +H +LIHDD+ +D RR + T+ Q+ TA+ AG+ L F+++S + L
Sbjct: 76 IETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL 133
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L M I KTG L +C GA
Sbjct: 134 RSIQQDSGSMEKILKGELDQMA-----TRYQTKITIDDYLKQVSGKTGQLFALSCFIGAY 188
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S + G N+GI FQL DD+LD D L K
Sbjct: 189 ESGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 229
>gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis]
Length = 426
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 17/231 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
L+++ K + + L+ SH + L + Y G GK +R + A
Sbjct: 107 QLLEDDLKNVYEDIRRELVANTSH------EELRTIATYYFGGQGKALRPMVAILMARAI 160
Query: 66 NVNHLTALRVGAAIECIHC----YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + + + + + ++ +D RRGKP+V+ + + +AG+
Sbjct: 161 NYDKDQSGLLASQRQVAMISEMIHNASLVHDDVVDQSDFRRGKPSVNALWSQKKVTMAGD 220
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L A +I+ + SQ++ L +Q + E
Sbjct: 221 FILAVASMMIARLQNDDVTLTLSQVITDLVQGEFMQL------GSKETENERFAHYLTKT 274
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT +L+ + ++ A++ A + E +G N+G+ FQL DDLLD
Sbjct: 275 YRKTASLIANSAKAVAMLGGADERLAELAFQYGRNIGLAFQLVDDLLDFVS 325
>gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
Length = 289
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + + ++ + Y++ GGK++R L + +R+
Sbjct: 14 VIDDYLARHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ A A+ E+ +L + + G +Q+ DDL+D
Sbjct: 191 AVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDV 224
>gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
Length = 291
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIEC 81
L + + + L I Y++ GGK+IR L+ E F + +V AA+E
Sbjct: 12 LTIQEFYQSKEVSADLTETILYSVEAGGKRIRPLLLLELLEGFGLELTPAHFQVAAALEM 71
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L + +++ + +
Sbjct: 72 IHTGSLIHDDLPAMDNDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLVAMVELPSQVK 131
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ LSL + + + Q+ I KTG L+ + + I+A
Sbjct: 132 VDLIAELSLAAGSFGMVAGQVLDMQGEGRKLTMDQLQTIHANKTGKLLAYPFVAAGIIAQ 191
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ+ +LR GE LG+ FQ+ DD+LD
Sbjct: 192 TSQSVLGKLRQAGELLGLAFQVRDDILDVTA 222
>gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
Length = 375
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 32/260 (12%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLV 58
+ LP+ ++ L D L + S + + + + L GGK+IR
Sbjct: 19 DADLPA-------HVERALADFLGRAGSEILRTEPSVAAGIEALSGFVLGGGKRIRPTFA 71
Query: 59 TECASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
+ + + S P++ +
Sbjct: 72 WWGWRGAGGAASGPLAEGALQAVASLELIQACALIHDDLIDSSDSRRGRPTVHVAAEKLH 131
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ V + + + A + + +L GQ
Sbjct: 132 AGRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAPLPAETIAAARPAWRAMRTEVLAGQ 191
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGI 219
LD++ + + + ++ + GA +A A + L FG ++G+
Sbjct: 192 YLDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGASLAGADEQLIATLLEFGGDVGV 251
Query: 220 IFQLADDLLDCEED---LPK 236
FQL DDLL D K
Sbjct: 252 AFQLRDDLLGVFGDPSVTGK 271
>gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1);
trans-octaprenyltranstransferase [Arabidopsis thaliana]
gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 367
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 21/238 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNH 69
+ + L L S + ++ + +A + GGK++R LV A L +
Sbjct: 50 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 109
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
LT A ++ +D +RRGK TVH + A++AG+ + A
Sbjct: 110 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 169
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + SQ++ Q + D + + KT +L+
Sbjct: 170 YLANLENLEVIKLISQVIKDFASGEIKQA------SSLFDCDTKLDEYLLKSFYKTASLV 223
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + E++ FG+NLG+ FQ+ DD+LD DL K
Sbjct: 224 AASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAK 281
>gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
2360]
gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
2360]
gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
Length = 318
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 10/218 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L LL + N L A+ + GGK++R V + N +
Sbjct: 8 EIEKELV-LLEEFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVI 66
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
AAIE +H +LIHDD+ +D RRG+ T+ ++ A+ G+ L T A +++
Sbjct: 67 PAAAAIEILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG 124
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + +I ++ + ++ Q + ++ KT L AC
Sbjct: 125 NVPEKRLSILAKGIKAICEGEVDQYQHKYSIDTSVYTYLKR------IGRKTAVLFSAAC 178
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
GA +A Q L G G+ FQ+ DD+ +
Sbjct: 179 ALGAYIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYT 216
>gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
43184]
gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
43184]
Length = 324
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 16/233 (6%)
Query: 11 ENSKRIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++ +I+ + A+ ++++ N RL SAI L GK +R LV A
Sbjct: 2 KDRSKIEQPVAVEFKRFNDEFAASLRSETN-RLQSAIDQILNASGKHVRPLLVLLTAKAC 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+
Sbjct: 61 GQVTDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLS 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A I S L L+ Q + + + ++ + + KT
Sbjct: 119 TALIRSIQTGNLQIIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQ------VIRKKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
L+ E G+I A AS E+ R FGE LG FQ+ DD+ D ++ K
Sbjct: 173 AMLLSACAEIGSISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFKEANIGK 225
>gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
Length = 316
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 24 LLQTASHMQTQHNDR---LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L + S + Q + + I++ L GGK+ R ++ + + V AAI
Sbjct: 9 LQEMESLIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCTDARRIVVAAAI 68
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E +H +L+HDD+ +D +RRG T + + +I+ G+ L AF+ I S +
Sbjct: 69 EFLHSATLLHDDV--VDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIVSCNSIQL 126
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ S + Q + + + T+ I KT L ACES A++
Sbjct: 127 LSVLSNTASIIVSGEMQQLVHSSSLDISR------TKYLEIISSKTAVLFSAACESAAVL 180
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
++ LR +G N GI+FQ+ DD+LD +L K+
Sbjct: 181 HDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKR 221
>gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491]
gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
Length = 306
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 18/225 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +I+ + D L + S + + ++ S GK +RS L A +
Sbjct: 2 EVLAQINQKIQDFLEELESPIVLGLSQKIQS--------GKMLRSKLALNIA---GESDE 50
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L + L +DN RR +P+++ + AI+ G+ L + AF
Sbjct: 51 CILLCAIIEMIQNASLL---HDDVIDNATTRRSQPSINAIAGDKNAIMLGDVLYSKAFCE 107
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + R IG + + +E + + + KT +L+
Sbjct: 108 LSDFQESFPMIPRIVSNAVTLLAIG----EMEDVELAKQFNANEAKYLKMIEHKTASLIE 163
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A +A +Q E + R +G NLGI FQ+ DD+LD +
Sbjct: 164 STAYAAAFLAGRNQEEAKDFRVYGRNLGIAFQIIDDVLDITANEK 208
>gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R]
gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 366
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 64/251 (25%), Gaps = 23/251 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---YALLGGKKIRSFLVTECASL 64
L + + + L L + + + L GGK+IR
Sbjct: 10 DLDKFPEVVRDRLTQFLDAQELTIAGIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLA 69
Query: 65 FNV----------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + I S P++ +
Sbjct: 70 AQGLKNSSERLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNF 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
E + A + + ++GGQ+LDI
Sbjct: 130 EGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALARTRDAWRGMRTEVIGGQLLDIY 189
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E V + + + GA +A S + L +G ++GI FQL
Sbjct: 190 LESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLR 249
Query: 225 DDLLDCEEDLP 235
DDLL D
Sbjct: 250 DDLLGVFGDPA 260
>gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 317
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 16/226 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHL 70
+ + ++ L + + + S GGK++R +LV + + + N N
Sbjct: 5 DKAYFEKVMYQHLDSNVNFILQVGKYIIDS-------GGKRVRPYLVLKFSKIMKNKNEE 57
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AA+E +H SL+HDD+ +D +RRGKPT + + T ++ G+ L A +
Sbjct: 58 KDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTANRIFGNDTTVLTGDYLYANALYL 115
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
S SQ + + L+ I D I + + I + KT AL
Sbjct: 116 FSIHGNIDMIKNVSQTVKKMAEGQLLEL------KKIADFDITLQEYYSILEGKTAALFG 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G + ++ K++ +G N+G+ FQ+ DDLLD K
Sbjct: 170 SCCYVGTALGTDNETLKQKAFEYGLNIGMAFQIVDDLLDYTGKEEK 215
>gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
7454]
gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
7454]
Length = 279
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + K ID + + ++ L A+ YA GK+IR +
Sbjct: 4 MNKKEFDRILNTDKKIIDQAMKEKF---------VDDNPLNEALIYASDSGKRIRPIVFL 54
Query: 60 ECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
E + + + ++E +H YSL+HDD+P MDN RRGK TVH ++ E AI
Sbjct: 55 ETCRMLLGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAI 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ LL++AFE I ++D + L G GM+ GQ+ DI+ +
Sbjct: 115 LVGDSLLSFAFENIL--NLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSY 172
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ K KT L A + + +L + LG+ FQL DD+LD
Sbjct: 173 ILDVYKNKTSRLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILD 225
>gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 316
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 24/230 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ++ L + + + L+ A GGK++R LV A L
Sbjct: 1 MEAVERRLGEEV-RLDDLQVDPATTHLVGA------GGKRLRPALVLLAAEL-GPRPGAE 52
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +A+ + MD+ +RRG P+V + AI+AG+ L A + S
Sbjct: 53 AVLDSAVAVELTHLASLYHDDVMDDAPMRRGVPSVQSLFGNSVAILAGDVLFARASLVTS 112
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189
+ H + + GQ+ + + ++ KTG+L+
Sbjct: 113 ----------KLGPQAVKLHATTFERLCQGQLHETIGPRASVSPRDHYIRVLEDKTGSLI 162
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + S + L +GE +G+ FQLADD++D E D K
Sbjct: 163 ATSARYGVLFSGGSWELADALAQYGECIGVAFQLADDVIDIESDGAVTGK 212
>gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 287
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + I+ L+ L + + + R + Y++ GGK++R L
Sbjct: 1 MT-TFKEFQAKYTPIINDFLEGQLAKES------DDPRFAEIMAYSVMAGGKRLRPLLFL 53
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
V + IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+
Sbjct: 54 ATLDALGVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAIL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L + I+ + K +++ G+ + +E E +
Sbjct: 114 AGDALQPLGIQWIAQAEHNWKL---VEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVID 170
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D
Sbjct: 171 HMEWLKTGCLILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDI 222
>gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
Length = 343
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 82/228 (35%), Gaps = 16/228 (7%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
I I+ D + N ++ + GGK++R + C+ L
Sbjct: 22 ADIQQIIADDFAIMDKQVFGSLNSKVQLVMSVSQHVINAGGKRMRPLITLLCSRLCRDEQ 81
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
AAI + ++ +D +RRG PT + +D TA++ G+ L+ AF
Sbjct: 82 SEDAMHLAAITEM-LHTATLVHDDVIDESGLRRGHPTANATWDNPTAVLVGDYLIARAFN 140
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ ++ L + G + G++L +Q + + ++ G
Sbjct: 141 LLVGFQSL---------PLLKLFSDGTCDIAEGEVLQLQHQHNPQATEDDYMRIIDGKTS 191
Query: 190 CFACE--SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G + + FG++ G FQ+ DD+LD D
Sbjct: 192 RLFMMATCGVAILQDKPEFMQPFSDFGQHFGNAFQIIDDVLDYTGDSE 239
>gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 296
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + I+ L+ L + + + R + Y++ GGK++R L
Sbjct: 10 MT-TFKEFQAKYTPIINDFLEGQLAKES------DDSRFAEIMAYSVMAGGKRLRPLLFL 62
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
V + IE IH YSLIHDDLP+MDN RRG+ T H ++ E AI+
Sbjct: 63 ATLDALGVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAIL 122
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L + I+ + K +++ G+ + +E E +
Sbjct: 123 AGDALQPLGIQWIAQAEHNWKL---IEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVID 179
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ +KTG L+ + + +A + ++ F ++ G +QL DDL+D
Sbjct: 180 HMEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDI 231
>gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis]
Length = 348
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK IR+ L A + A+ AA+E +H +SL+HDD+ MD+ RRG+PTV
Sbjct: 63 SGGKMIRAALTILAAEACGGDAQQAVPGAAAVELVHNFSLLHDDV--MDHDLERRGRPTV 120
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
++ AI+AG+ +++ + Q + + + GQM D
Sbjct: 121 WSKFGTPAAILAGD-------ILLARACGMFDEASGHQGWATKALIDAIAELAAGQMADL 173
Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + + + KT AL+ AC GA + A R FG +LG+ FQL
Sbjct: 174 ALERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDATSRRFGAFGMHLGMAFQLV 233
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 234 DDVLGIWGDPA 244
>gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium
sp. P08]
Length = 324
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 83/232 (35%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 6 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVAEAANHIISAGGKRFRPLLVVL 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 58 CSQFGHEADEADLVRAAVVVELTHVASLY-HDDVMDEASKRRGAPSANLRWGNSVAIMVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 117 DYLFSKASLAVAELGVDFVR-------LQARTFSRLVQGQIAETRGPSQGEDPLAHYLKV 169
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 170 VADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLADDLIDVTS 221
>gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
Length = 365
Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 83/232 (35%), Gaps = 17/232 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + I+ L + A + + GGK+ R LV
Sbjct: 47 SSEFTDLVSAKLALIEDEL--------GRQAGADTPFVAEAANHIISAGGKRFRPLLVVL 98
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
C+ + L A + + + ++ MD RRG P+ ++++ AI+ G
Sbjct: 99 CSQFGHEADEADLVRAAVVVELTHVASLY-HDDVMDEASKRRGAPSANLRWGNSVAIMVG 157
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + A ++ L L + +
Sbjct: 158 DYLFSKASLAVAELGVDFVR-------LQARTFSRLVQGQIAETRGPSQGEDPLAHYLKV 210
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA+++HAS L FGE++G +FQLADDL+D
Sbjct: 211 VADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLADDLIDVTS 262
>gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1]
gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1]
Length = 289
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 8/223 (3%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + + ++ + Y++ GGK++R L + +R+
Sbjct: 14 VIDDYLAKHLA--SEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEEPEIRIA 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSK 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
K + +G Q + + + ++ +KTG L+ + E
Sbjct: 132 SAKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-MEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A+ A AS E+ +L F + G +Q+ DDL+D + K
Sbjct: 191 AVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGK 233
>gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1]
gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
Length = 326
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 80/234 (34%), Gaps = 24/234 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + ++ L +++ L +Y + GGK+ R L
Sbjct: 11 LHSKIEEVNERLFEVVKSEE--------PDLDRMAKYTIEAGGKRFRPLLTILAFESSTD 62
Query: 68 NHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + + A E IH SLIHDD+ R + + + L
Sbjct: 63 DPYFKILDLAAGYELIHTASLIHDDIIDDSPMRRGRPTLSYKEGINNAIVVAD---YLFA 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ S L + + L L+ + G + +D + + +
Sbjct: 120 KAYELGSRYGPLVSKVMADASSRLAEGQILEAVNLGNLDITEDTYYKIIENKTAHFFE-- 177
Query: 187 ALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
AC GA I+A A + +E L F NLG+ FQ+ DD+LD D K
Sbjct: 178 -----ACALGATIVAEADRPTREILSNFAFNLGMAFQVTDDILDIVGDDRYTGK 226
>gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 317
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 87/225 (38%), Gaps = 14/225 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ + ++ L + + + S GGK++R +LV + + + N
Sbjct: 5 DKAYFEKVMYQHLDSNVNFILQVGKYIIDS-------GGKRVRPYLVLKFSKIMK-NKNE 56
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A + ++ +D +RRGKPT + + T ++ G+ + A +
Sbjct: 57 EKDYILAAALEYLHTASLLHDDVVDGSQLRRGKPTANRIFGNDTTVLTGDYMYANALYLF 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S+ SQ + + L+ I D I + + I + KT AL
Sbjct: 117 STHGDIDMIKNVSQTVKKMAEGQLLEL------KKIADFDITLQEYYSILEGKTAALFGS 170
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
C G + ++ K++ +G N+G+ FQ+ DDLLD K
Sbjct: 171 CCYVGTALGTDNETLKQKAFEYGLNIGMAFQIVDDLLDYTGKEEK 215
>gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana]
Length = 390
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 21/238 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNH 69
+ + L L S + ++ + +A + GGK++R LV A L +
Sbjct: 73 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 132
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
LT A ++ +D +RRGK TVH + A++AG+ + A
Sbjct: 133 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 192
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + SQ++ Q + D + + KT +L+
Sbjct: 193 YLANLENLEVIKLISQVIKDFASGEIKQA------SSLFDCDTKLDEYLLKSFYKTASLV 246
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + E++ FG+NLG+ FQ+ DD+LD DL K
Sbjct: 247 AASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAK 304
>gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 349
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 24/251 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + +L+ L D +TA ++ ++ + + + L GGK++R
Sbjct: 1 MTGAITEQLRRY-------LHDRRAETA-YIGDDYSGLIAALEEFVLNGGKRLRPAFAYW 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG----------------YIRRGK 104
+ ++ +D+ + R
Sbjct: 53 GWRAVATEAPDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQW 112
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
++ AI+ G+ L +A +I+ + R + + + L G +
Sbjct: 113 QGSPERFGMSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRTEVLGGQYLDIV 172
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + + + + GA A + + FG +LG+ FQL
Sbjct: 173 AEASAAASIASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLGVAFQLR 232
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 233 DDVLGVFGDPA 243
>gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
CBDB1]
gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
CBDB1]
Length = 326
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 13/234 (5%)
Query: 8 KLQENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
KL I+ L + + S + + + + Y L+GGK +RS L A F
Sbjct: 5 KLSSIYAPINEGLKGVEDEFKLVSESRKKSFPEMAEMLDYILVGGKVLRSALSMLSAMCF 64
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + + E +H +L+HDD + R ++ +L
Sbjct: 65 GAGIKKVLPLATSSEMLHIATLVHDDAIDKADTRRGRRTVNAVWGLEKA--------ILL 116
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
F + +T + + L + Q + KT
Sbjct: 117 GDFLFAHAAETAAETGNMGIVTLFSQTLQIIASGELKQAYASFNPDQSYENYLERISGKT 176
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AL A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD D+ K
Sbjct: 177 AALFVMATKGGAILADASSSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 230
>gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
Length = 355
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 34/259 (13%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
+ L++ + ID +L D T D L A+R Y + GGK++R ++ L
Sbjct: 3 NHLRQIAADIDRLLAD-----DEFPATVRPDYLRDAVRDYPVRGGKRLRPAMLIWSCGLL 57
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------I 109
+ AL AA+E H ++L+HDD+ D+ V
Sbjct: 58 GGSESAALYPAAAVEVFHNWTLVHDDIIDQDDTRRGAPTSHVKLAAELGGRFSLAADDAE 117
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ AI+AG+ +A +++ + + + ++ G+ LD++
Sbjct: 118 RTGRDFAILAGDLQQGWANDLLLRSAEHGVPPEVTVALGRRFQKLANSDLISGEALDVEF 177
Query: 170 EFI-----DETQVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGII 220
+V + +KTGAL+ F E+GA++ A A + +L F GI
Sbjct: 178 SLRELTGLKSQEVRTMLGLKTGALLQFCTEAGAMIALNTADAEHPDVRKLSEFALAAGIA 237
Query: 221 FQLADDLLDCEE---DLPK 236
FQL DD L L K
Sbjct: 238 FQLRDDYLGIFGVYDSLGK 256
>gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815]
gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
Length = 330
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + E+ ++++ ++ L + Q ++ ++SA GGK++R L+ A
Sbjct: 12 ANLLAPIAEDMQQVNRVIRHRLASEVMLIN-QISEYIISA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGDRTGYRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +F+++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFQMMVGVGKMRVMEILSEATNIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + GA+++ A + FG +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAAQLGAVLSGADATTEAAAAEFGRRIGTAFQIMDDWLDYTG 226
>gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 354
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 68/239 (28%), Gaps = 13/239 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
R+D +L + + H+ D + +R A GK++R+
Sbjct: 12 AAFKARVDDVLLHFVEEEIDHLLAVDGDLAPVADRLRIATNRGKRLRAAFCYWGWRAAGQ 71
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNG--------YIRRGKPTVHIQYDEVTAIIA 119
AL AA + + + D D+ ++ V A
Sbjct: 72 PDSDALVRAAAAMELVHAAAVVHDDLIDDSPLRHGLPTAHVALRAAVVASPRPGAAARSL 131
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-- 177
+ T + + ++ G+ L+I
Sbjct: 132 AMLVGDLLMSWAGQLFTACGLPAAYLSRARPLWAVLARELVAGECLEILRTGAHPDTAAS 191
Query: 178 -FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I+ + G + A + +E L +G LG FQL DDLL D
Sbjct: 192 LKVIRYKTAKYTVEHPLHIGGALGGACEELREALSDYGLPLGEAFQLRDDLLGLFGDPA 250
>gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 373
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 82/260 (31%), Gaps = 39/260 (15%)
Query: 15 RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLF------- 65
+ T LDD L A+ ++ D + L GGK+ R+
Sbjct: 10 HVQTRLDDFLAAQAAGLREISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69
Query: 66 ------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD------- 112
VG A ++ +D RRG+P H +++
Sbjct: 70 AGRPQGEERPGYRAVVGVAAGLEIFHAAALVHDDIIDRSDTRRGRPAAHRRFEALHAASG 129
Query: 113 ---------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----- 158
E A + G+ LL ++ E++ L D ++ + + Q
Sbjct: 130 WGGSSASFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELAMMRTQVTLGQY 189
Query: 159 ---MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ + +E +I + GA +A A+ + LR G
Sbjct: 190 LDVLEEVAWPTVPEEDTLARAHNVIVYKSAKYSIEAPLVVGANLAGATPEQVTALRAVGL 249
Query: 216 NLGIIFQLADDLLDCEEDLP 235
LGI FQL DD+L D
Sbjct: 250 PLGIAFQLRDDVLGVFGDSA 269
>gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
27405]
gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
27405]
Length = 318
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 10/218 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L LL + N L A+ + GGK++R V + N +
Sbjct: 8 EIEKELV-LLEKFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVI 66
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
AAIE +H +LIHDD+ +D RRG+ T+ ++ A+ G+ L T A +++
Sbjct: 67 PAAAAIEILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG 124
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + +I ++ + ++ Q + ++ KT L AC
Sbjct: 125 NVPEKRLSILAKGIKAICEGEVDQYQHKYSIDTSVYTYLKR------IGRKTAVLFSAAC 178
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
GA +A Q L G G+ FQ+ DD+ +
Sbjct: 179 ALGAYIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYT 216
>gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
Length = 340
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 30/253 (11%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M L +LQ + +I+T++ A+ ++ + RL + +AL GGK+IR L
Sbjct: 1 MKAEKLKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLT 53
Query: 59 TECASLFNVNHLTALRVGAAIECI------------HCYSLIHDDLPSMDNGYIRRGKPT 106
A L + + + ++ +D+ RRG+ T
Sbjct: 54 LLAARLTTAANHGGVPTEPPAADQATDRQRLAIAFEYLHTASLLHDDVIDHAAQRRGRET 113
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
V+ ++D+ AI+AG+ L A + + Q + + ++ LQ
Sbjct: 114 VNSRWDQGHAILAGDFLHARAMWLAGNYGGQPCLELIASATEAMVAAEFLQAEAAAARDW 173
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
++ + + L+ AC+ G + + + LR +G NLG+ FQ+ DD
Sbjct: 174 RRETYFAVLEGKTAA------LIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDD 227
Query: 227 LLDCEED---LPK 236
LLD D K
Sbjct: 228 LLDFLGDPRATGK 240
>gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
[polymorphum gilvum SL003B-26A1]
gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
[Polymorphum gilvum SL003B-26A1]
Length = 336
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 18/237 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + + + ++ ++ + + S GGK++R L A
Sbjct: 17 SLVDLVARDMEAVNRLILSKAGSNVDLIPEIAKHLIDS-------GGKRLRPMLTLALAD 69
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+F + + A++E +H +L+HDD+ +D +RRGK + +++ G+ L
Sbjct: 70 MFGYQGSGHVTLSASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNQASVLVGDYL 127
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L AF+++ + + ++ + +Q ++ E + +
Sbjct: 128 LGQAFKMMVDVGSLEALRVLAEASAVIAEGEVMQL------GAAKNLATSEASYMKVIEA 181
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KT AL A E G I+A S R +G LG+ FQL DD LD DL K+
Sbjct: 182 KTAALFAAAAEVGPIIAGQSAETCAAARRYGMELGLAFQLVDDALDYGGSSADLGKQ 238
>gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
18170]
gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
18170]
Length = 324
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
K++ + I+ L + + + + + L + Y GK +R LV A L+
Sbjct: 3 KIEIIKRPIERELSEFKMLFDATLTSTAP-MLGDVLGYIRNRNGKMMRPMLVMLMAKLYG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
V + L ++E +H SL+HDD+ +D RRG+ +V+ YD +++ G+ +L
Sbjct: 62 VVNPATLHSALSLELLHTASLVHDDV--VDKSDKRRGQASVNALYDNRVSVLVGDYMLAT 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + K ++ ++L +L+ +Q + + E F + + KT
Sbjct: 120 SLRHAAYTKEIELVDLVARLGQNLSEGEIVQL------ANTNNTDFSEEIYFDVIRKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
AL + ESGA+ AS + + FGE +GI FQ+ DD+ D E+L K
Sbjct: 174 ALFTASAESGALSVKASAEDVDNAALFGEMIGIAFQIKDDIFDYFENEELGK 225
>gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
Length = 340
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 30/253 (11%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M L +LQ + +I+T++ A+ ++ + RL + +AL GGK+IR L
Sbjct: 1 MKAEKLKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLT 53
Query: 59 TECASLFNVNHLTALRVGAAIECI------------HCYSLIHDDLPSMDNGYIRRGKPT 106
A L + + + ++ +D+ RRG+ T
Sbjct: 54 LLAARLTTAANHGGVPTEPPAADQATDQQRLAIAFEYLHTASLLHDDVIDHAAQRRGRET 113
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
V+ ++D+ AI+AG+ L A + + Q + + ++ LQ
Sbjct: 114 VNSRWDQGHAILAGDFLHARAMWLAGNYGGQPCLELIASATEAMVAAEFLQAEAAAARDW 173
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
++ + + L+ AC+ G + + + LR +G NLG+ FQ+ DD
Sbjct: 174 RRETYFAVLEGKTAA------LIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDD 227
Query: 227 LLDCEED---LPK 236
LLD D K
Sbjct: 228 LLDFLGDPRATGK 240
>gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b]
gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b]
Length = 301
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
+R+ + L+ LL Q D++ +A+R L GK+IR L+ A +
Sbjct: 20 QRLQSHLEQLLPC------GQQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDMGCDSQQP 73
Query: 73 L--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A+E +H SLI DD+PSMDN +RRG+PTVH ++ AI+A LL+ AFE+
Sbjct: 74 GLLDLACAVEMVHAASLILDDIPSMDNAQMRRGRPTVHREFGANVAILAAIALLSRAFEV 133
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGAL 188
I+ L +S + L+ +GLQG++ GQ D+ D + + ++KT L
Sbjct: 134 IA-LAPGLAAQRKSDAIAELSAAVGLQGLVQGQFQDLHDGAHARSAEAIELTNELKTSVL 192
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
+ AI A+AS ++ L F ++LG+ FQL DDL D D K
Sbjct: 193 FRATLQMAAIAANASPTVRQNLSAFAQDLGLAFQLLDDLTD--GDTHTGK 240
>gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 589
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 11/218 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + + + + A Y GGK+ R L A +G A
Sbjct: 285 LERALAELTDTRCETFAEASSYLQAQGGKRARPLLTLSAAEACGGADEAQRALGLAAG-- 342
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
L L D + + + A ++ + + +
Sbjct: 343 -VEWLHQGSLLLDDIVDAAELRRGRQALHAATSPTFAAGVATFVFARVVRASQGMHPEIR 401
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + T G + ++ + + T + I KT +L A E GA A
Sbjct: 402 SALVNSAATLAEGERL----ELQRTGEAELPRTDYYAIIAAKTASLFACAVEVGARAVGA 457
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + L +G LG+ FQ+ DD+LD + K+
Sbjct: 458 PRGQVRALIRYGRELGLAFQIIDDVLDYVGEARVFGKR 495
>gi|72161455|ref|YP_289112.1| polyprenyl synthase / dimethylallyltranstransferase [Thermobifida
fusca YX]
gi|71915187|gb|AAZ55089.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Thermobifida fusca YX]
Length = 356
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 69/237 (29%), Gaps = 17/237 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+D L + + + +L+A+ + GGK++R L
Sbjct: 16 VDAELAAFVASRRPLLLEIGAEWEPVLAALEAMISGGKRLRPAFCYWGWRGAGGGEEPGL 75
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRG---------------KPTVHIQYDEVTAII 118
AA + + D ++ R ++ AI+
Sbjct: 76 YTAAAALELLQACALIHDDVIDNSDTRRGQPAVHRRLAALHRESGWHGDPDEFGRGAAIL 135
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L + ++ S + + L + G + + E +
Sbjct: 136 LGDLCLAWCEDMYQSSALPAEALAAGRGPFDLMRTEVVAGQYLDLVEQARGADTVEAALR 195
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + GA +A +G LGI FQL DD+L D
Sbjct: 196 VMRFKSAKYTIEQPLHLGAALAGRYAELAPAYTAYGIPLGIAFQLRDDVLGVFGDPE 252
>gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
Length = 264
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L+ +I++ L +LL + L A+ Y + GK+IR + ++
Sbjct: 2 LELWKSQIESRLRELLKPFEPRI-------LYDAMSYYVFQEGKRIRPLFLCAVSNALGG 54
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N A+ VG AIE IH YSL+HDDLP++DN RRGKP+ H+ + E AI+AG+ LL A
Sbjct: 55 NLQDAITVGCAIEFIHNYSLVHDDLPALDNDDFRRGKPSCHVLFGEDMAILAGDALLNLA 114
Query: 128 FEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
FE +S+ + + + ++ ++ + G QGM+GGQ++D++ + I KT
Sbjct: 115 FETLSNRENFISLSEKDLIYIIRLVSESSGFQGMVGGQVMDVKKLGDPWS----ISLKKT 170
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD------CEED 233
++ G I++ E L G +G++FQL DD D D
Sbjct: 171 ASMFSAVFACGGIISKKY-ERVEYLSKAGTQVGLLFQLIDDYKDKDGFYLLYGD 223
>gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 301
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 10/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
+ RI+ L L Q LL A++Y++ G K++RS L+ +F VN
Sbjct: 8 ERYKHRINQKLFYTLNQL-----PFQKSSLLKAMKYSVFSGSKRLRSSLIYSTGDVFKVN 62
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
T + AIE IH YSLIHDDLP MDN RRGK + H++Y E T+++AG+ L + AF
Sbjct: 63 ITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF 122
Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
I+S+ + + R +++ L+++IG GM GQ LD + + ++ +++ +I KT
Sbjct: 123 NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKT 182
Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
LM A ++ S++ L F ++G+ FQ+ DD+LD ++D K
Sbjct: 183 SFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234
>gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
acidophilus NCFM]
gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
acidophilus NCFM]
gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
Length = 289
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 9/217 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
ID L L + ++ + Y++ GGK++R L + + +
Sbjct: 15 IDNYLAKHLASE------IDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEI 68
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
R+ IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 69 RLACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAE 128
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ I + +G Q + + ++ ++ +KTG L+ +
Sbjct: 129 GSNSSELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINK-MEWLKTGCLIQASV 187
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E A+ A AS E+ +L F + G +Q+ DDL+D
Sbjct: 188 EMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDV 224
>gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 353
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 25/241 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S ++ R+++ L++ + A + L A GGK++R L
Sbjct: 28 SRTLLSTVEAGLGRVESTLEEEVRS-ADRLADVTARYLYEA------GGKRVRPMLAILT 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + V A+E H SL HDD+ MD RRG P+ + AI+ G+
Sbjct: 81 AQLGRGTTPEVIEVATALELTHLGSLYHDDV--MDGADKRRGVPSAQTVWGNNIAILTGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A ++++ + + ++ GQM + + V
Sbjct: 139 LLFSRASQLMARRGER----------AIQLQADTFERLVLGQMHETVGPQEGDEPVEFYL 188
Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
++ KTG+L+ A + G I + A + ++ + FGE G+ FQL DD++D +
Sbjct: 189 RVLADKTGSLIAAAAQCGVIYSGAPEEFEQPMVVFGEKAGVAFQLLDDVIDLSPDASETG 248
Query: 236 K 236
K
Sbjct: 249 K 249
>gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
Length = 343
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +RS L A + A+E +H +SL+HDDL MD RR +PTV
Sbjct: 63 GGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDL--MDGDTERRHRPTVW 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +AI+ G+ +L A E++ + + L L + Q
Sbjct: 121 ALWGSASAILTGDAMLALAQEVVLDSGSPHAV---AAGRLLTETTRRLIHGQFLDVAFEQ 177
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + + KTGAL+ + GA++A A + L FGE +G+ FQL DD+L
Sbjct: 178 RDDVGLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQLVDDVL 237
Query: 229 DCEEDLP 235
D
Sbjct: 238 GIWGDPA 244
>gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum]
Length = 398
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 24/239 (10%)
Query: 16 IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
+ + DDLL + ++ N L+SA GGK++R LV A + +
Sbjct: 80 FEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEMSGLK 139
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
LT A ++ +D RRGK T+H Y A++AG+ + +
Sbjct: 140 ELTTNHRRLAEIIEMIHTASLIHDDVLDESDTRRGKETIHQLYGTRVAVLAGDFMFAQSS 199
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + + SQ++ Q ++ D + + + KT +L
Sbjct: 200 WYLANLENLEVIKLISQVIKDFASGEIKQA------SNLFDCDVGLDEYLLKSYYKTASL 253
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + + AI + + E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 254 IAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILDFTQSAAQLGKPAGSDLAK 312
>gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces
cinnamonensis]
Length = 352
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 14/239 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSFLVTECASLFN 66
+E ++++ L L + + + GGK+IR
Sbjct: 19 EELLEQMEDRLRAFLRAEHELWAEVNERAVGAVAALTDLVAAGGKRIRPAFCIAGYLAAG 78
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-----DEVTAIIAGN 121
+ V AA ++ +D RRG+PTVH ++ +
Sbjct: 79 GDPDDTAVVAAAAALEMLHASALIHDDVIDASSHRRGRPTVHARHSALHDRNAWQGESRR 138
Query: 122 GLLTYAFEI--ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ 176
A + ++ ++ +L + + + M+G M +
Sbjct: 139 YGEGVAILVGDLALVYSEQLMAAAPPAVLPVWGTLRSELMIGQYMDMTAAAEFLVDPRLS 198
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ + GA A + +GE +G FQL DDLLD D
Sbjct: 199 RWIALAKSGHYTIHRPLVVGASAAGR-ADLAPAFAKYGEAVGEAFQLRDDLLDAFGDFA 256
>gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 293
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 10/228 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
+ L + ++T L + + A RY+L+GG K+IR+ LV +
Sbjct: 8 QNYLAQAMAALETACGRFLPEE---------SEVCRAARYSLMGGGKRIRAVLVLSVCDM 58
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A + AA+E +HCYSLIHDDLP MDN +RRG+P+ H + E TA++AG+ LL
Sbjct: 59 LGGSMQAAQQFAAAVEMLHCYSLIHDDLPCMDNDDLRRGRPSCHKAFSEATAMLAGDVLL 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE +++ +++ L L + E Q+ +I + K
Sbjct: 119 TEAFETVANAPADASVCVQAARALGAGAGSRGMVYGQELDLKYEALAATEDQLRLIHRNK 178
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
TGAL+ A + GA A A + + L + LG++FQ+ DD+LD
Sbjct: 179 TGALINAAIQMGAAAAKADEAQCRVLEQYAYGLGLVFQIVDDVLDVTS 226
>gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate
Synthase From Corynebacterium Glutamicum
gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Corynebacterium Glutamicum Complexed With Isoprenyl
Diphosphate And Magnesium
Length = 380
Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 64/251 (25%), Gaps = 23/251 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---YALLGGKKIRSFLVTECASL 64
L + + + L L + + + L GGK+IR
Sbjct: 17 DLDKFPEVVRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLA 76
Query: 65 FNVNHL----------------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + I S P++ +
Sbjct: 77 AQGHKNSSEKLESVLDAAASLEFIQACALIHDDIIDSSDTRRGAPTVHRAVEADHRANNF 136
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
E + A + + ++GGQ+LDI
Sbjct: 137 EGDPEHFGVSVSILAGDXALVWAEDXLQDSGLSAEALARTRDAWRGXRTEVIGGQLLDIY 196
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E V + + + GA +A S + L +G ++GI FQL
Sbjct: 197 LESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLR 256
Query: 225 DDLLDCEEDLP 235
DDLL D
Sbjct: 257 DDLLGVFGDPA 267
>gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 364
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 89/246 (36%), Gaps = 23/246 (9%)
Query: 13 SKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NH 69
+R+ LD + + D +L A+ L GGK++R+ + +
Sbjct: 11 LERLQETLDAEVSHQRDVLAPLGGQTDLMLDAVATLLRGGKRVRASFLYWGYRAAGGADS 70
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYI--------------RRGKPTVHIQYDEVT 115
+R A++E +L+HDD+ + RG ++ E
Sbjct: 71 DALVRCAASMELFQAAALLHDDVMDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGEAG 130
Query: 116 AIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+AG+ LT+A E+ ++ R+ L T +G Q + +
Sbjct: 131 AILAGDLCLTWADEMYATSGLPADEVARGRAVFDLMRTQLMGGQFLDVLEASTPWATMGT 190
Query: 174 ETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
++ ++ M GA A AS + + L +G LG +QL DDLL
Sbjct: 191 PERIERALRVIRFKSAKYTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQLRDDLLG 250
Query: 230 CEEDLP 235
D
Sbjct: 251 VFGDPA 256
>gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
Length = 321
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 10/230 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ E I L D + + +++ L + Y + GK+IR V A LFN
Sbjct: 1 MDEIKHLISKELQDFESKFSDAVKSHVP-LLDRIMHYIVKRKGKQIRPMFVLLSAKLFNN 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + AA+ + ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 60 NIQESTYRAAALVEL-LHTATLVHDDVVDDANERRGFFSINALWKNKIAVLVGDYLLSKG 118
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S+ + ++ LQ ++ +D + + I + KT +
Sbjct: 119 LLLSVDNNEFRSLKILSEAVKEMSEGELLQIEKTRKLNIKEDIYFE------IIRRKTAS 172
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
L+ AC +GA E++R FGE +G+ FQ+ DDL D D + K
Sbjct: 173 LLASACAAGAWSTTNDDETTEKMRLFGEKVGVAFQIKDDLFDYGSDKIGK 222
>gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 360
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 80/250 (32%), Gaps = 29/250 (11%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSA----IRYALLGGKKIRSFLVTECASL---FN 66
+D +L + + + A + L GGK++R V
Sbjct: 9 AAVDEVLTTFFDSGRPALDAIYPA-VAEAGDVLADFVLAGGKRVRPSFVYAGWRCGPDTA 67
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT--------------VHIQYD 112
+ ALRVGAAIE I +LIHDD+ + Y
Sbjct: 68 GDDTMALRVGAAIELIQACALIHDDILDRSDTRRGNPTVHRRFEGLHAGRRLTGDSAHYG 127
Query: 113 EVTAIIAGNGLLTYAFEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
AI+ G+ L +A +++ ++ S L G L
Sbjct: 128 VSAAILLGDLALAWADDLVHGIGPATDGWADPRPLPRSVGVLWSRMRTEVLGGQLLDITN 187
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + +++ + + GA ++ A L G +LGI FQL D
Sbjct: 188 ESSRDESVTAAYRVMEYKTAAYTVARPLQLGAALSGADAALSGSLHRIGLDLGIAFQLRD 247
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 248 DVLGVFGDPE 257
>gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 276
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN L + K ID + ++L A+ YA GGK+IR+FL
Sbjct: 2 MNKEKFLESLSLDKKIIDREIQSYFNP---------KNKLEEAMVYATDGGKRIRAFLYL 52
Query: 60 ECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E +F+ N ++ +IE IH YSL+HDDLP+MD+ RRG+ +VH ++ E I+
Sbjct: 53 ETKKMFSQNISELDYKLAMSIEFIHAYSLVHDDLPAMDDDDYRRGQESVHKKFGEDIGIL 112
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL A I+ + L + G M ++ D + +
Sbjct: 113 TGDALLNEAALIL-FDIGIKDSSYLKASSYILERASRFGMIEGQVMDLRRESTYDLSYLL 171
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL-DCEEDL 234
+ K KT L AC + A+ ++ ++ ++ F ENLG+ FQ+ DDLL D +D
Sbjct: 172 EVYKKKTSDLFKAACLAAALTSNQTEYTYRKIEVFAENLGLAFQIQDDLLEDTYKDE 228
>gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
5a2]
Length = 324
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 16/231 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
M + + + +++ ++ L N + I+Y+ GK++R LV
Sbjct: 1 MLTDISLLVSKELSKVNDYINRCL--------YTENPVIQQVIQYSFQQQGKQLRPQLVL 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
AS+ + R GAA+ + ++ + +D RR K TV+ ++ A++
Sbjct: 53 IVASVLGNDITEKTRRGAALVSLLHHASLI-HDDVVDEATYRRHKETVNARWGNKLAVLF 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L + +I + + + +++ LQ Q+ E
Sbjct: 112 GDYVLANSLQIAIENQDYDFLPMLTITTQTMSEGEILQL------KQAQEIMASEATYLE 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + KT +L+ +C GA+ ASQ + E + GE +G+ FQL+DDL+D
Sbjct: 166 IIQKKTASLLAASCAMGAMSVSASQEQIEIMYAIGEQIGMAFQLSDDLIDY 216
>gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella
paramesenteroides ATCC 33313]
gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella
paramesenteroides ATCC 33313]
Length = 342
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 10/224 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+ L D+L + +Q + + + GGK +R + N +
Sbjct: 31 VQQELQDVLFIIQNSLQANDKEVEQALLDMFRAGGKMLRPAFAIIIGQFYPGNTSNLKHI 90
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E +H +LIHDD+ +D+ RR P++ ++ + A AG+ L F+ ++
Sbjct: 91 AAAVEMLHTATLIHDDI--IDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATFKTLAYHT 148
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L Q + D + KT AL + +
Sbjct: 149 DDMTLVRQATKLLEDILTGELT-----QRTNHYDRHMTLADYKEQIAGKTAALFVLSAQL 203
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GA A + + F N+G+ FQ+ DD+LD + DL K
Sbjct: 204 GAANGDAPDEFVDLVTEFAFNVGMAFQILDDILDYQSTKTDLGK 247
>gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
Length = 326
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 16/237 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
MN + + + I+ +D L IRY + LGGK++R L
Sbjct: 1 MNQSIKEYIVSINSAIEQ--EDF---------GDKPQELYEPIRYIMSLGGKRMRPLLSL 49
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L+ N + A+E H ++L+HDD+ MDN +RRG+ TVH +++ AI++
Sbjct: 50 LSYQLYKDNIKEVIPASIAVEIFHNFTLMHDDI--MDNAPLRRGQQTVHEKWNSPVAILS 107
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L A++ + + K + + + + E + E
Sbjct: 108 GDVMLVKAYQQLIANSPTEKLTEILEKFNRCAIEVCEGQQIDMNF--EEQEQVQEADYIE 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ ++KT L+ F+ E G I+A ++ ++ L G N GI FQL DDLLD D K
Sbjct: 166 MIRLKTAVLLGFSLEFGGILAMDNEADQALLYQMGVNAGIGFQLMDDLLDVYADQDK 222
>gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
Length = 321
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I L D+L +++ + S I GGK +R V + + ++
Sbjct: 10 EIKRELVDVLDLMKKNVKCKDKKIENSIIELIESGGKLLRPAFVLIGSKFGTNDTEKSIP 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A IE +H +L+HDD+ +D+ +RRG+ T+ +Y + A+ G+ L F+I+++
Sbjct: 70 TAAVIEMLHMATLVHDDV--IDDSKLRRGRETIQSKYGKDYAVYIGDYLFCVCFKILATS 127
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + S+ M + Q M KT L +
Sbjct: 128 ASLQAIKVDSRAMSKICMGEVNQLNSRFSMKLSV------KDYLNRISGKTAELFSISLY 181
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA +A + L G NLG+ FQ+ DD+LD E
Sbjct: 182 LGAAECNADDKVSKELGKIGHNLGMAFQIIDDILDYEG 219
>gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
synthase) [Campylobacter concisus 13826]
gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter concisus 13826]
Length = 299
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 25/241 (10%)
Query: 18 TILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
++L+D + +++ + A+ L GGK R+ L+ + + A+
Sbjct: 2 SLLEDFVKFLNANLPKAPSFHPYYEEALGVMLKAGGKHFRALLLLGVVENVDKSLTQKAM 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
RV +E +H YSLIHDDLPSMDN +RRG PT+H+ YDE TAI+AG+ L T+AF IS
Sbjct: 62 RVALGLEMMHTYSLIHDDLPSMDNASLRRGTPTLHVTYDETTAILAGDALNTHAFYEISR 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------------- 178
+ R + + L+ N G+ GM+ GQ LD E ++ +
Sbjct: 122 ADL--PADTRIKCVEILSQNAGVSGMVLGQALDCFFENTNKEDIKRAKAKFGLSGKMLSL 179
Query: 179 ----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L+ + + GA++ + + E +++ G LG+ FQ+ DD++D D
Sbjct: 180 DELVFLHIHKTAKLIAASLKMGAVIVNLDEKECDKIYDIGLKLGLAFQIQDDIIDLTSDE 239
Query: 235 P 235
Sbjct: 240 A 240
>gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL2A]
gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str.
NATL2A]
Length = 323
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + ++ L+ LLL S + H +A GGK++R +V +
Sbjct: 6 EILQPVELDLEALLLDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKE 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L+ + ++ +D RRG TVH ++D A++AG+ L A
Sbjct: 66 LPLKHRKLAQITEMIHTASLVHDDVVDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + S++++ L QG+ KT +L+
Sbjct: 126 HLANLENLEVVKLLSRVIMDLAEGEIKQGLNRFDSSQSF------ESYLEKSYCKTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ ++ ++++ Q L FG LG+ FQ+ DD+LD + L K
Sbjct: 180 ANSSKAIGVLSNVDQESLNSLYFFGRQLGLAFQVVDDILDFTGNDEQLGK 229
>gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella
sp. 3_1_44]
gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella
sp. 3_1_44]
Length = 323
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E +RI L+ + AS T D + GGK++R+ L A+
Sbjct: 8 EIMERIALDLEHVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIANAGTSIER 67
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+++ A+E +H +LIHDD+ +D IRRG+ T+H+ AI++G+ L AF+I
Sbjct: 68 QRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAFKI 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + S ++ L +Q ++ + ++ +TQ KT M
Sbjct: 126 VSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQ------KKTADFME 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E G ++ ++E L+ +G LG+ FQ+ DD++D
Sbjct: 180 GCMELGGLLGDWQESEIIELKKYGHALGMAFQITDDIMDY 219
>gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase; OPP synthetase) [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 317
Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 17/235 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + +Q + D LD ++ + ++ + GGK+IR F
Sbjct: 1 MKSKIK--IQSVLSKFDKNLDSIIHEDIPILKKIKKQVI-------TSGGKRIRPFSHYL 51
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
NV ++ L VG+ E IH SL+HDD+ +DN IRRGKPT+ + TAI+AG
Sbjct: 52 FCQFMNVKDVSWLDVGSVAELIHAASLLHDDV--VDNAPIRRGKPTIGASFGNKTAILAG 109
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ LL ++S I SQ++ L+ + LQ + I
Sbjct: 110 DYLLACGISRLNSLGNPDLMEIFSQVLRDLSVSELLQMEWEKNPNITLKIY------DQI 163
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L E+ AI+A+ S+ +++ R FG LG +FQ DD LD ED
Sbjct: 164 IYGKTASLFGVCTEAAAILANQSKEKRKEFRQFGVRLGKLFQKKDDCLDYFEDSK 218
>gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 357
Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A N + G ++E +H +SL+HDDL MD RR + T
Sbjct: 63 GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDL--MDGDETRRHRATAW 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ A++AG+ L T E++ + + ++ GQ LD+
Sbjct: 121 TVFGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLITTATRRLIDGQALDVS 180
Query: 169 DEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E D + ++ KTGAL+ + GA++A A + L+ +G +LG+ FQ D
Sbjct: 181 FEQRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAVD 240
Query: 226 DLLDCEE 232
DLL
Sbjct: 241 DLLGIWG 247
>gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
Length = 406
Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 92/238 (38%), Gaps = 21/238 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNH 69
+ + L L S + ++ + +A + GGK++R LV A L +
Sbjct: 89 ELVADDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
LT A ++ +D +RRGK TVH + A++AG+ + A
Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASW 208
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + SQ++ Q + D + KT +L+
Sbjct: 209 YLANLENLQVIKLISQVIKDFASGEIKQA------SSLFDCDAKLDDYLLKSFYKTASLV 262
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
+ + AI + + E++ FG+NLG+ FQ+ DD+LD DL K
Sbjct: 263 AASTKGAAIFSRVETDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAK 320
>gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
Length = 352
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 80/238 (33%), Gaps = 15/238 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ +Q + R++ I+ + M + L+ A GGK+ R
Sbjct: 25 SAAFADAVQVSLDRVEDIIRAEVDSGIEAMSA-VAEHLVKA------GGKRFRPLFAVVA 77
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L AA + MD +RRG P ++++ AI+AG+
Sbjct: 78 GKL-GQPDQQGAVEVAAAALELIHLATLYHDDVMDEATMRRGVPAANVRWGNQVAILAGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +I+ + + + + + Q Q
Sbjct: 137 YLFARACGLIAQLGS----EATAIVAHTFAELVTGQFRDVVGAGADQGNAAKIEHYLATI 192
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT +L+ + A Q+ ++RL G G+ FQ+ADD++D D K
Sbjct: 193 HGKTASLIGACGRLAGLAVRADQDVQDRLASIGVLTGMAFQIADDIIDIGSGSADSGK 250
>gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Picrophilus torridus DSM 9790]
gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Picrophilus torridus DSM 9790]
Length = 328
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 22/234 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-LF 65
++ I+ L D + + L RY + GGK+ R L
Sbjct: 10 SMRSKIAEINQRLLDSIQTDEKY--------LYDMARYTIEAGGKRFRPLLTILSFEIAS 61
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
++ L + A E IH SLIHDD+ +D+ +RRG+ T+ + AI+ G+ L
Sbjct: 62 GESYEKILDLAAGYELIHTASLIHDDI--IDHSDMRRGRYTLSYKEGINNAIVVGDYLFA 119
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A+E + S + I + +L L+ G + ++E I + KT
Sbjct: 120 KAYE-LGSRYGKEVSKIMADASSNLAEGQILEAENIGNLN------MNEETYLKIIENKT 172
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A A RL F N+G+ FQ+ DD+LD D+ K
Sbjct: 173 ARFFAACALGATKAAGADFEISNRLSNFAYNMGMAFQITDDILDIIGNEKDMGK 226
>gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
Length = 288
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 67/209 (32%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L SA+ YA+ GG +IR L+ A+ + + A+E IHC SL+HD
Sbjct: 21 SEAPSKLASALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 80
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPT H Y E AI+ G+ L+ FE+++ +
Sbjct: 81 DLPCFDDAEIRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRALQLVTALA 140
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 141 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 193
Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
G +G FQ+ADDL D D L K
Sbjct: 194 EELGARIGEAFQVADDLRDALCDADTLGK 222
>gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 325
Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 18/227 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + + ++ L + RY L GGK++R L A
Sbjct: 1 MARSIDDGLALVEEQLLREVRFADDVADVTT--------RYLLDAGGKRVRPMLALLIAQ 52
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L N + AIE H SL HDD+ MD +RRG P+ + AI+AG+ L
Sbjct: 53 LGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRRGVPSAQAVWGNSVAILAGDLL 110
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A +I++ + + + + + + ++ +
Sbjct: 111 FARASKIVADLGPRAIRLQAATFERLVLGQLH-------ETIGPREGQDPIEHYLDVLAD 163
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTG+L+ A + G I + A + + FGE G+ FQL DD+LD
Sbjct: 164 KTGSLIACAAQMGVIYSGADPELESAVLAFGERTGVAFQLVDDVLDL 210
>gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 325
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ L++ I+ + Q + +++ + Y + GK+IR V A
Sbjct: 1 MKKILEKVKGSINEEMKIFEKQFNAIIKSDVP-LINKITHYIVHRKGKQIRPMFVFLIAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + IE IH +L+HDD+ +DN Y+RRG +++ + A++ G+ L
Sbjct: 60 MLGTIQKKTYHTASLIELIHTATLVHDDV--IDNSYLRRGSFSINAIWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + + + I + + ++ LQ ++ + + I
Sbjct: 118 LSKSLLLATENNYHDLLKIICRTIKDMSEGELLQMEKSKKLDITEKIYNQ------IIYH 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L+ +CE GA +A+++ ++R FG GI FQ+ DDL D
Sbjct: 172 KTASLIAASCEGGARSVNANEDIALKMRKFGGLTGIAFQIKDDLFDY 218
>gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424]
gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424]
Length = 320
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL 64
L++ + +L+D+ + + +L + I+ Y L GGK++R L+ CA+L
Sbjct: 3 KKMLKQYDTLVQEVLEDIFK-----ITRSDDKKLNTIIKEYFLNGGKRVRVLLLLICANL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A ++ +D RRG+ T+ Y E A+ G+ L
Sbjct: 58 GDFEKNKKNIIRIASIVEIIHTASLIHDDIIDKAKTRRGQTTMSRAYGEEYALYVGDYLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
I+ K + S + L +Q + + T K K
Sbjct: 118 ATVLREIAEFKDERLHMYLSNTLKELCIGEIIQEE------GLYNIRTRRTDYLKKIKRK 171
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T L+ FA +G+I++ AS +R FG LG+ +Q+ DD LD
Sbjct: 172 TAILIAFATSAGSIVSCASNENIQRSYAFGYYLGMSYQIIDDYLDFAG 219
>gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 347
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 11/228 (4%)
Query: 15 RIDTILDDL----LLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH 69
++ +L+ L + L Y GK +R+ L F
Sbjct: 11 HVERMLERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRAFGGGD 70
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L +E H LIHDD+ D RRG T+H +Y A+ GN A
Sbjct: 71 AVGLNAAVTVELFHNAFLIHDDIQ--DESEQRRGGRTLHAEYGVGVALNVGNMTNLLALR 128
Query: 130 IISSPK----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + + + + ++ L + H++ Q + G + D + + M K +
Sbjct: 129 RLAANRAALGSGIAWRLFTETELMMRHSLEGQAIEIGWIRDNVCDLDADDYYRMCLKKTS 188
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ C +G ++A +N + L +G LG FQ+ DD L+ D
Sbjct: 189 WYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDALNLTGD 236
>gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
Length = 338
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 18/238 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ ++ + R+++I+ + M + L A GGK+ R
Sbjct: 14 SDAFTESVRASLDRVESIIIAEVESGIEAMAA-VAEHLAKA------GGKRFRPMFTVVA 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + AA + MD +RRG P+ ++Q+ AI+AG+
Sbjct: 67 GQL-GADERRGDVEIAASALELIHLATLYHDDVMDEATMRRGVPSANVQWGNQIAILAGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +I+ ++ +I +Q L + + D + + +
Sbjct: 126 YLFARACGLIAKLGSE-ATSIVAQTFGELVTGQLQEVLGAQGERDKIEHY------LTVI 178
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT +L+ + A + +++L GE +G+ FQ+ADD++D D K
Sbjct: 179 FGKTASLLGACGRLAGLAIRADRQVQDQLAVIGELVGMAFQIADDIIDIGSGSADSGK 236
>gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
Length = 302
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 7/235 (2%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ SK I ++D+L+Q Q H + L++ IRY + GKKIRS + S+ V
Sbjct: 8 SFHQKSKIIKKQVNDILMQKVRSFQKIHRN-LINVIRYIIFEGKKIRSCFIYSVGSMLKV 66
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ A++EC+H YSLIHDDLPSMDN IRR K + HI + E AI+AGN L A
Sbjct: 67 SCKQISKIAASVECMHAYSLIHDDLPSMDNDDIRRNKKSCHIVFGEANAILAGNALQALA 126
Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKM 183
FE ++S + L Q++ LT G++G+ GGQ LDI + + +I
Sbjct: 127 FELLLSLNRKNLDHKSHLQIIRELTIAGGIKGICGGQSLDISKKKRCHMNIELLNIIYFY 186
Query: 184 KTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT +L+ + + + L + EN+G++FQ+ADDL+D ++D K
Sbjct: 187 KTVSLIRASIRMIFYASRYRYEKKLILILDDYSENIGLLFQIADDLIDFKKDKLK 241
>gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium
BAC13K9BAC]
Length = 274
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ ++ + LD L + + N +L + Y++ GGK++R ++ E A
Sbjct: 2 EINKYIKNEITSFNNDLDIFLNKYKT------NTKLYKVMCYSMKNGGKRLRPIIIKEVA 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++N L+ AIE +H YSLIHDDLP MD+ RRG+ + H +YDE AI+AGN
Sbjct: 56 KSLSLNKNQFLKSMIAIELVHSYSLIHDDLPCMDDDDYRRGRLSTHKKYDEAQAILAGNS 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LLT AF +++ + S L G +D ++ ++ + I +
Sbjct: 116 LLTMAFNLLAQDSNPSLVELLSLLSGHEGLAGG-----QSLDVDTTEKKLNFKIIKKIHE 170
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT L F + I+++ SQ E R +G+ +G +FQ+ DD+ D E
Sbjct: 171 QKTAKLFEFCLAAPFIISNKSQKEINMSRKYGKIIGTVFQIIDDVHDYE 219
>gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 394
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 15/246 (6%)
Query: 1 MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
M LP L++ D +++ + N + Y L GGK
Sbjct: 1 MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGSGERGSNGLYQLILDYPLRGGK 60
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R L + L A +E H LIHDD+ D + RRGKPT+HI Y
Sbjct: 61 ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDY 118
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL----QGMLGGQMLDI 167
A+ G+ +L+ + + + ++ +++ ++ Q + +
Sbjct: 119 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 178
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
D + M++ + ++G + A A+ + L G +LG FQ+ DDL
Sbjct: 179 TWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLESLGRHLGAAFQITDDL 238
Query: 228 LDCEED 233
L+ D
Sbjct: 239 LNLRAD 244
>gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
Length = 325
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 11/231 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + + I T ++ + ++ M ++ L Y + GK++R V + + +
Sbjct: 4 VAQIKQPIITEMELFEKKFSNSMTSKVA-LLNRITHYIVNRKGKQMRPMFVFLVSKMVSD 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 63 GLVNDRTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ +D + + I + KT
Sbjct: 123 LLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYE------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PK 236
L+ C GA +AS E E LR FGE +G+ FQ+ DDL D D K
Sbjct: 177 LIAACCAMGAKSVNASDEEVENLRLFGEYIGMAFQIKDDLFDY-GDTQIGK 226
>gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 359
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 16/240 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--NH 69
+ +D +L+D L A H L ++ L GGK+IR L +
Sbjct: 16 VRESVDVVLEDFLTAKARTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDT 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQYDEVT 115
RV A +E H ++LIHDD+ + +P ++
Sbjct: 76 DAVFRVAACLEMFHAFALIHDDVMDDSDTRRGRPTIHRTLAALCAADRRPDQIERFGVSG 135
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ G+ LT++ E++ S +LS + G + E
Sbjct: 136 AVLLGDLALTWSDELLHSAGLTPAQFDAVLPLLSEMRTEVMLGQYLDLQATGELTDDVEA 195
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + + GA +A A+ E + LG FQL DDLL D
Sbjct: 196 TLTVNRYKTAKYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAFQLRDDLLGVYGDPE 255
>gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 347
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 11/228 (4%)
Query: 15 RIDTILDDL----LLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH 69
++ +L+ L + L Y GK +R+ L F
Sbjct: 11 HVERMLERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRAFGGGD 70
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L +E H LIHDD+ D RRG T+H +Y A+ GN A
Sbjct: 71 AVGLNAAVTVELFHNAFLIHDDIQ--DESEQRRGGRTLHAEYGVGVALNVGNMTNLLALR 128
Query: 130 IISSPK----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++ + + + + ++ L + H++ Q + G + D + + M K +
Sbjct: 129 RLAANRAALGSGIAWRLFTETELMMRHSLEGQAIEIGWIRDNVCDLDADDYYRMCLKKTS 188
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ C +G ++A +N + L +G LG FQ+ DD L+ D
Sbjct: 189 WYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDALNLTGD 236
>gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
HTCC2155]
gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
HTCC2155]
Length = 360
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 97/258 (37%), Gaps = 31/258 (12%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62
S L + +ID+ L + T L + + Y GGK++R L A
Sbjct: 5 DFKSDLSSIASQIDSYLLEH-----PFPNTVSPSWLGNEMSSYTKNGGKRLRPALCLWSA 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT---------------- 106
+L + A V +A E H ++L+HDD+ D
Sbjct: 60 ALVSDCPELATSVASAAEIFHTWTLVHDDIIDRDATRRGLPTSHTALADFARKEHGSEGD 119
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+ AI+ G+ +A ++S + + + ++ + +LGG+ +D
Sbjct: 120 NADHFGLSMAILTGDLQQAWALRLVSEQANKDLTSGTALAVMDRLLSHVYPVLLGGEAID 179
Query: 167 IQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFGENL 217
++ E + ++ + +MKT L+ F+ ++G ++ + F N
Sbjct: 180 VEFEHREIDSISPEEILKMLEMKTACLLEFSAQAGVVVGLELDSFDHDLVHHAGQFAYNA 239
Query: 218 GIIFQLADDLLDCEEDLP 235
G+ FQL DD+L D
Sbjct: 240 GLAFQLQDDILGVFADEK 257
>gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides]
Length = 288
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L +A+ YA+ GG +IR L+ A+ + + + A+E IHC SL+HD
Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPVLSDAAAVALELIHCASLVHD 80
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ +
Sbjct: 81 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 140
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 141 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 193
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 194 EELGARIGEAFQVADDLRDALCDAE 218
>gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii]
Length = 403
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 93/237 (39%), Gaps = 13/237 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
N + + +K ++ L + + T ++ L Y G GK R V
Sbjct: 73 NSSPKEAVTDPTKLTESELSQVCTNIKKELNTSKHN-LNEISHYLFDGKGKAFRPMTVLL 131
Query: 61 CASLFNVNHLTALRVGAAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A N + + +V + + ++ +D RRGK V+ + +
Sbjct: 132 SAKACNYHSGLSTQVTQSQREVAMIAEMIHTASLIHDDVIDAADTRRGKAAVNEIWGQKN 191
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+ G+ +L+ + +++ + + + ++ + + M G D + F
Sbjct: 192 AILVGDFILSKSSALLARIGNK---EVVIVISQAIDDLVRGEFMQLGSKEDENERF---A 245
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT +L+ +C++ +I++ + E +G N+GI FQL DD+LD
Sbjct: 246 HYLQKTYKKTASLIANSCKAVSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLDYIS 302
>gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
Length = 529
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHC---------YSLIHD 90
A Y L GK+IR ++ A ++ + A + + ++
Sbjct: 236 AAYYFDLKGKRIRPTILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLV 295
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RR P+++ Y AI+ G+ LL+ A ++S+ K + S
Sbjct: 296 HDDVIDDADTRRDVPSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMS------ 349
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ ++ G+ + I+ +KT +L+ +C S AI++ + + +
Sbjct: 350 ---TVISDLVEGEFMQIKASGSSFDIYIRKTYLKTASLIANSCRSTAILSGSDRQVIDIA 406
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
FG+NLG+ FQ+ DDLLD
Sbjct: 407 TDFGKNLGLAFQIVDDLLDFTSSTE 431
>gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM
22836]
Length = 323
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 11/227 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+K + L + +N R+ I + + GK+IR L+ A +
Sbjct: 7 IAKPVAEELKIFNTYYKDSVF-CNNVRIQEIIDHIMKSDGKRIRPILLLLAAKACGEINN 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+E +H SLIHDD+ +D IRRGK +++ YD A++AG+ L+ A
Sbjct: 66 ITYNAAITVELLHTASLIHDDV--VDESKIRRGKASLNAIYDNKMAVLAGDYFLSTALIK 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ S L L Q+ +++ IDE + F + K KT +LM
Sbjct: 124 SVLTGNIEIISNISDLGRDLAEGE------LNQLSLVKELIIDEDEYFQVIKKKTASLMS 177
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
GAI +AS+ E E+ GE G+ FQL DD+ D D K
Sbjct: 178 VCMRIGAISVNASEEEIEKFTRLGELFGLCFQLRDDIFDYFTDAIGK 224
>gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ]
Length = 325
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
L+GGK++R L L+ V+ T +IE +H SL HDD+ +DN RRG
Sbjct: 41 VLVGGKRLRPLLTYLVGHLYGVDFKTLDPYAKSIELVHAASLSHDDV--IDNATTRRGVA 98
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+++IQ A++AG+ LL+ +++ ++++ L +Q
Sbjct: 99 SINIQASNKKAVLAGDYLLSDVIVNLTNAGNLELVGEMAKVIQDLAIGEWIQA------D 152
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
I+ + I KT ++M + C + AI+A S++ E+ + G +LGI FQL D
Sbjct: 153 AIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAGLSRSTIEKSKQMGIDLGIAFQLMD 212
Query: 226 DLLDCEEDLPK 236
D LD + K
Sbjct: 213 DTLDFSSESQK 223
>gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 349
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 24/251 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + +L+ LD+ +TA ++ +N + + + L GGK++R
Sbjct: 1 MTGAITEQLRRY-------LDERRAETA-YIGNDYNGLIAALEDFVLGGGKRLRPAFAYW 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG----------------K 104
+ + ++ +D+ RRG
Sbjct: 53 GWRAVATDEPDEQVLLLFSALELLHACALVHDDVIDDSSTRRGRPTTHVQFATLHRDRGW 112
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
++ AI+ G+ L +A +I+ + R + + + L G +
Sbjct: 113 QGSPERFGASAAILLGDLALAWADDIVFGIDLTPQAQRRIRRVWANIRTEVLGGQYLDIV 172
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + + + + G A + + FG +LG+ FQL
Sbjct: 173 AEASAAASIASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLGVAFQLR 232
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 233 DDVLGVFGDPA 243
>gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106]
Length = 293
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
T+L L + A L +A+ + AL GK+ R L+ A T +
Sbjct: 11 TLLQTRLEEIAQGFGAVSQP-LGAAMSHGALSSGKRFRGMLMLLAAEASGGVCDTIVDAA 69
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E +H SLI DDLP MD+ +RRG+ H+ + E A++ G L+T A +++ +
Sbjct: 70 CAVEMVHAASLIFDDLPCMDDAGLRRGQSATHVAHGESRAVLGGIALITEAMALLAGAR- 128
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+R+QL+ L+ ++G QG+ GQ LD+ Q +KTG L E
Sbjct: 129 GASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNGAGVEQE-QDLKTGVLFIAGLEML 187
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A++ E+ ++ FG LG +FQ DDLLD D L K
Sbjct: 188 AVIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLDVVGDQAALGK 230
>gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644]
Length = 362
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 77/238 (32%), Gaps = 22/238 (9%)
Query: 20 LDDLLLQTASHMQTQHND---RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ + ++ + D + + L GGK+IR +
Sbjct: 19 IRNFFIERRAEAAALGPDFAVMVGDLESFVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEA 78
Query: 77 AAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVT----------------AI 117
C L +D RRG P HI Y E AI
Sbjct: 79 VLSACSGFELLHAAGLIHDDIIDASRTRRGHPAAHITYAERHRASRFSGDSQIFGTGTAI 138
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L +A ++ + R + S + + G L + +D+ + +
Sbjct: 139 LIGDLALIWADVLVRGSRLPADAQARVSPVWSAVRSEVMYGQLLDLISQARDDEDVDAAL 198
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + + GA +A AS + R FG LGI FQL DDLL D
Sbjct: 199 RVNRYKTASYTVERPLQFGAAIAGASPDLITAYRSFGAGLGIAFQLRDDLLGVFGDPE 256
>gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW]
gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW]
Length = 289
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
+ RI+ L+ + T + RL A+RY++ GG ++R L A +
Sbjct: 2 DVMARIELALESAIKGTE---VSGTPPRLAEAMRYSVFPGGHRLRPRLCVAVARACGDDA 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+IE +HC SL+HDDLP D+ IRR KP+VH + E A++AG+GL+ AF
Sbjct: 59 PELTDAAAASIELLHCASLVHDDLPCFDDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++++ Q D +L+ + G+ G + E E + + KTGAL
Sbjct: 119 DLLARAAAQRPD----RLIPLMGVVSRSVGVPSGIIAGQAWECEPEADLSEYHRAKTGAL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A +GA A A R GE LG +Q+ADDL D D
Sbjct: 175 FAGATMAGAAAAGADP---TPWRFLGERLGEAYQVADDLRDVAADPE 218
>gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
Length = 325
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 9/228 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++ ++ + + M ++ L Y + GK++R V A L +
Sbjct: 4 VAQIKDPVNKEMELFEKKFHASMSSKVA-LLNRITYYIVNRKGKQMRPMFVFLTAKLVSG 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D+ RRG +V+ + A++ G+ LL+
Sbjct: 63 GKVNERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ +D + + I + KT
Sbjct: 123 LLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARKLDITEDVYYE------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ C GA + ++ E R FGE +G+ FQ+ DDL D D
Sbjct: 177 LIAACCSLGACSVNPDSDDVETFRKFGELIGMAFQIKDDLFDY-GDEA 223
>gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio]
gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio]
Length = 411
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
+KL++ + L ++ + + L + Y G GK R +V A
Sbjct: 86 AKLKDPFSLVQKDLQNIYDDIKQQLLVSKAE-LKALCDYYFDGKGKAFRPMIVILMARAC 144
Query: 66 NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
NV+ + A+ ++ +D+ RRGK T++ + E AI+AG
Sbjct: 145 NVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGERKAILAG 204
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L+ A ++ ++ SQ++ L + M G + + F +
Sbjct: 205 DFILSAASMALARIGNTTVVSVLSQVIEDLVRG---EFMQLGSKENENERFKHYLEKTF- 260
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +L+ +C++ +I+ ++ E +G N+GI FQL DD+LD + L K
Sbjct: 261 --KKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGK 317
>gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
Length = 324
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ + L++ I + + + L+ M+++ L + Y + GK++R V A
Sbjct: 1 MKADLKQIQVPIASEMTEFELKFRGLMKSKV-KLLDHIMNYIVKRKGKQMRPMFVFLTAG 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + R A IE +H +L+HDD+ +D+ RRG +V+ + A++ G+ L
Sbjct: 60 VCGEINESTHRGAALIELLHTATLVHDDV--VDDANYRRGFFSVNALWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + I S + ++ LQ ++ ++ + I +
Sbjct: 118 LSRGLLLSVDNGDFKLLQIVSNAVKEMSEGELLQIAKARKLDITEEVYYQ------IIRQ 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
KT +L+ C GA + +++ FGE +G+ FQ+ DDL D EE++ K
Sbjct: 172 KTASLIASCCAVGASSVEGNIEVVSKMQEFGEKVGMAFQIKDDLFDYGEEEIGK 225
>gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL1A]
gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
[Prochlorococcus marinus str. NATL1A]
Length = 323
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 10/230 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + ++ L+ LLL S + H +A GGK++R +V +
Sbjct: 6 EILQPVELDLEALLLDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKE 65
Query: 71 TALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L+ + ++ +D RRG TVH ++D A++AG+ L A
Sbjct: 66 LPLKHRKLAQITEMIHTASLVHDDVVDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASW 125
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + + S++++ L QG+ KT +L+
Sbjct: 126 HLANLENLEVVKLLSRVIMDLAEGEIKQGLNRFDSSQSF------ESYLEKSYCKTASLI 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ ++ +++ Q L FG LG+ FQ+ DD+LD + L K
Sbjct: 180 ANSSKAIGVLSDVDQESLNSLYFFGRQLGLAFQVVDDILDFTGNDEQLGK 229
>gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
Length = 330
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 8/205 (3%)
Query: 35 HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
H D L + Y GGK +R L A AL G +E + LIHDD+
Sbjct: 22 HPDPLYQELLQDYPRRGGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDI 81
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
D RRG+P +H + A+ AG+ L + +++ + + L
Sbjct: 82 E--DGSEERRGRPALHRLHPMPLALNAGDALHGEMWGLLAEGVARGSLSPEVLLEFHQVV 139
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVF--MIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G + + + + M+ GA++A +
Sbjct: 140 RRTAYGQHLDLLWTLTGRLDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAGNTP--HPLY 197
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
G LG FQ+ DD+L+ E D
Sbjct: 198 EEAGLKLGTAFQIVDDVLNLEGDEA 222
>gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 323
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ S L+ + ++ D IL + L + + + + GGK++R L+ CA
Sbjct: 5 SDIQSLLKLDLQKTDEILINRLSSNVALINQMGHYIIH-------AGGKRLRPLLLLLCA 57
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ IE IH +L+HDD+ +D RRGK TV+ + +++ G+
Sbjct: 58 RATEYQGTHHYLMAVVIELIHTATLLHDDI--VDESITRRGKDTVNEVWGNAPSVLVGDF 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AFE++ P + I S+ S+ LQ + + T+ + + +
Sbjct: 116 LYSRAFEMMIEPNSMYIIRILSKTTNSIAEGEVLQLLNCKNTELTE------TEYYAVIE 169
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A + G +++ + ++ L+ +G +LG FQ+ DD+LD E
Sbjct: 170 RKTACLFQAATQIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVLDYES 219
>gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8]
gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8]
gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
Length = 326
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGTVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
16047]
gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
16047]
Length = 326
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I L+++ ++T H + ++ A GGK +R L+ A + +++
Sbjct: 13 IANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVGKTNERTIKL 72
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
++IE +H +LIHDD+ + RRG ++ + + A+ G+ L T F+++
Sbjct: 73 ASSIEILHMATLIHDDIIDDSDE--RRGNVSIQAAFGKDVAVYTGDLLFTDFFDLMLDAI 130
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + +R+ + N GQM + + K KT AL A E
Sbjct: 131 DEHEYLVRNAQTMRKILNG-----ELGQMAERFNLKQTLDDYLRDVKGKTAALFRLAAEE 185
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA A A+ + + L FGENLGI FQ+ DD+LD
Sbjct: 186 GAHFAGANSMQSDALAQFGENLGIAFQMVDDILDYSG 222
>gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
Length = 288
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L +A+ YA+ GG +IR L+ A+ + + A+E IHC SL+HD
Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 80
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ +
Sbjct: 81 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 140
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 141 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 193
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 194 EELGARIGEAFQVADDLRDALCDAE 218
>gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis]
Length = 348
Score = 87.2 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 12/191 (6%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK IR+ L A + A+ AA+E +H +SL+HDD+ D R
Sbjct: 63 SGGKMIRAALTILAAEACGGDARQAVPGAAAVELVHNFSLLHDDVMDRDLERRGRPTV-- 120
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
+ + +++ + Q + + + GQM D
Sbjct: 121 -------WSKFGTPAAILAGDILLARACGMFDEASGHQGWATKALIDAIAELAAGQMADL 173
Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + + + KT AL+ AC GA + A R FG +LG+ FQL
Sbjct: 174 ALERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDGTSRRFGAFGMHLGMAFQLV 233
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 234 DDVLGIWGDPA 244
>gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus]
Length = 369
Score = 87.2 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 87/259 (33%), Gaps = 37/259 (14%)
Query: 11 ENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---- 62
++ L DD +++ +H RL +A R A GGK+IR LV
Sbjct: 11 SRQAEVERYLGGFFDDAIVRADAHAADYR--RLWAAARDAASGGKRIRPRLVLGAYDALA 68
Query: 63 ----------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-- 110
A V A ++ +D +RRG+P V +
Sbjct: 69 AQGAPASGRERADAEPAAAAEAVALAAAFELLHTAFLVHDDVIDRDLVRRGEPNVAGRFA 128
Query: 111 ---------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
Y + +AI+AG+ L+ A + ++ + S L+
Sbjct: 129 LDAALRGLERERADAYGQASAILAGDLLIAAAHSVAAASTCRSSAGEPSSPSLTKCVFAA 188
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
G + + MI+ +GA++A A + ERL G
Sbjct: 189 AAGEHADVRHAAGVRPGEADILAMIEDKTACYSFSAPLRAGALLAGAPRATVERLGEIGR 248
Query: 216 NLGIIFQLADDLLDCEEDL 234
LG+ FQL DD+L D
Sbjct: 249 RLGVAFQLQDDVLGVYGDE 267
>gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 337
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 86/231 (37%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + ++ L + + + + A+ GGK++R L CA
Sbjct: 11 PDLESRITPGLEVVERRLLEAVSSSRDLTDELTS-------HLAVAGGKRMRPLLTLVCA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + V A + L MD+ RRG P+ + AI+AG+
Sbjct: 64 QLGESDRRLDDAVLTAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +++S ++ + + +
Sbjct: 124 ILFARASLLVASLGPEIVAHHARTFERLCQGQ-------LNETFGPTHGADRVDFYLQVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ A GA+++ A + + + FGE +G+ FQ+ADD+LD
Sbjct: 177 ADKTGSLVSTAASFGALLSGAGRLVADVVADFGEKVGVAFQIADDVLDLAS 227
>gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 417
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 100/264 (37%), Gaps = 37/264 (14%)
Query: 4 GLPSKLQ-ENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--G 50
G ++ ++S I+ LD LL M +L SA Y +G G
Sbjct: 60 GFKQQIHHQSSSLIEDQLDPFSLVADELSLLANKLRSMVVAEVPKLASAAEYFFKMGVEG 119
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD---------------DLPSM 95
K+ R ++ A+ NV+ G +
Sbjct: 120 KRFRPTVLLLMATALNVHIPEPTPTGVGDVVATELRARQQSIAEITEMIHVASLLHDDVL 179
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
D+ RRG +++ A++AG+ LL+ A ++S K ++ + ++ L
Sbjct: 180 DDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGET 239
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+Q + + ++ +T KT +L+ +C++ A++A + +G+
Sbjct: 240 MQMTSTSEQRCSMEYYMQKT------YYKTASLISNSCKAIALLAGQTAEVAMLAFEYGK 293
Query: 216 NLGIIFQLADDLLDCEE---DLPK 236
NLG+ FQL DD+LD L K
Sbjct: 294 NLGLAFQLIDDVLDFTGTSASLGK 317
>gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
Length = 338
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 88/230 (38%), Gaps = 17/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
Q + R++ ++ + + N + S GGK++R L A
Sbjct: 24 QRDMGRVNDLILSMAGSRVELIPEIANHLISS-------GGKRLRPMLTIASALAHGYEE 76
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A AA + + +D +RRG+ T + +++ G+ LL AF+
Sbjct: 77 GDAHVKLAASVEFMHTATLL-HDDVVDESDLRRGRRTARTIWGNQASVLVGDYLLGQAFK 135
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I S + Q +M + + KT AL
Sbjct: 136 MMVDVGSMAALAILSDASAVIAEGEVWQLAAAKRMTTSE------ADYLSVVDAKTAALF 189
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E G ++A S E+E +R +G +LGI FQL DD+LD DL K
Sbjct: 190 AAAAEVGPVIAGKSMREREAMRRYGRSLGISFQLIDDVLDYGGVATDLGK 239
>gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
Length = 346
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 87/240 (36%), Gaps = 9/240 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALLGG-KKIRSFLV 58
+ L+E I+ L + + + D L + + GG K++R L
Sbjct: 10 EAFVAYLREKLPLIERALHEANAAPMAEVDAPARDLDRYLYEPLAHFTAGGGKRVRPVLA 69
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A AL G AIE +LIHDD+ D +RRG+P ++ + E AI
Sbjct: 70 LLGAEAVGGCAEQALSSGVAIELFQSAALIHDDIA--DASELRRGEPCLYRTHGEGLAIN 127
Query: 119 AGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ L +++ +R L L+G + +
Sbjct: 128 AGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQALDLGWARDGRWDVTSSD 187
Query: 178 F--MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ MI+ + GA+ A A+ L G G+ FQL DDLL+ D
Sbjct: 188 YLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAGLAFQLQDDLLNLVGDAS 247
>gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
Length = 326
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
YIT 12066]
gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
YIT 12066]
Length = 323
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 20/239 (8%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + K+++ L + + S ++ N LS I GGK++R LV + L
Sbjct: 4 FEALIGSEMKKVEATL--VEGFSDSALEAHVNSLCLSIIN---AGGKRMRPALVLLASHL 58
Query: 65 ----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ ++ A +E +H +LIHDD+ +DN +RRG+PT++ A++AG
Sbjct: 59 LPSYTDEEETAVCKLAAGVELLHTATLIHDDV--IDNSLMRRGRPTLNSTSGNHVAVLAG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T F I K +I S + +L Q G + +
Sbjct: 117 DYMFTRCFATIKDLKKADVLSIISDTLATLVTGELDQLKNEGDVNISV------EDYYTT 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGAL + + A+ + L+ +G LG FQ+ DD LD D L K
Sbjct: 171 IYCKTGALFELSASAPAVYLGEEEKYITALKNYGRYLGNAFQIIDDCLDYSSDSKTLGK 229
>gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi]
gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi]
Length = 394
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 101/253 (39%), Gaps = 26/253 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN---------DRLLSAIRYALL-GGK 51
+ LPS +++ K + + + + L++ A + + + +Y GGK
Sbjct: 44 STRLPSFIRDKLKALQSEIMETLVRNAENSPSLLSTCFSSSAFTKTFQEMAKYYFDQGGK 103
Query: 52 KIRSFLVTECASLF------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
R + A + +T + A+ ++ +D
Sbjct: 104 LFRPTICLLMARACNQFEPKSMLVDSGRDTVTRNQYKIAVISEMIHTASLVHDDVIDKAD 163
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
IRRG T++ + A++ G+ +L A +++ S ++ + ++ L +Q
Sbjct: 164 IRRGSRTINALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFMQMN 223
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
G + Q + + KT +L +C+S A+++ S+ ++ +G++LGI
Sbjct: 224 DGTDLNATQRFNKYMAKTYS----KTASLFANSCKSAAMLSDVSEADELSAYEYGKSLGI 279
Query: 220 IFQLADDLLDCEE 232
FQ+ DDLLD
Sbjct: 280 AFQMIDDLLDYVS 292
>gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567]
gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567]
Length = 380
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 35/271 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
++ G+ S+ + + ++ + + Q + + +D LL AI GGK++R+ L
Sbjct: 10 LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69
Query: 59 TECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R GAA+E +LIHDD+ + + +
Sbjct: 70 YWGWRGAGGESILERSAPTPIIRAGAALELFQSAALIHDDIIDRSDTRRGKPSVHKKFET 129
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ G+ I + L + + + G + + +
Sbjct: 130 QHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEVMA 189
Query: 172 IDETQVF--------------MIQKMKTGALMCFACESGAIMAHA---------SQNEKE 208
V ++ ++CE ++ A E
Sbjct: 190 GQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALALTAIAHQDHPILE 249
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ R FG LG FQL DD L + K
Sbjct: 250 KYRAFGLPLGEGFQLRDDELGVFGEPSATGK 280
>gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus
CTV-05]
gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus
CTV-05]
Length = 329
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 8/223 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I L+++ + ++T ++D + + A GGK +R L+ A + + + ++
Sbjct: 13 IRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQI 72
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
I + +D+ RRGK ++ ++ + TA+ AG+ L T+ F++I +
Sbjct: 73 IQLASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILNA 132
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
++ ++ + L GQM + + D K KT AL A E
Sbjct: 133 ISEQDY-----MIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAE 187
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
G+ + + + L FGENLGI FQ+ DD+LD K+
Sbjct: 188 EGSHFGNGDEQTTQALASFGENLGIAFQIVDDILDYTG--GKQ 228
>gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
Length = 326
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 82/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + + GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVSLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KTG L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTGELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
Length = 326
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLQTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 337
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 81/246 (32%), Gaps = 24/246 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-----------G 49
M LP+ L +D L ++ + + Y G
Sbjct: 1 MTSTLPAALTAARTAVDPELRKVIGKLDPDTRGVC--------EYHFGWTNADGSPNGGG 52
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R LV A N A+ AA+E +H +SL+HDD + R +
Sbjct: 53 GKALRPALVLLSAQAVAPNGAQAVPAAAAVELVHNFSLLHDD-LLDGDTSRRHRPTAWTV 111
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ L ++ S + R+ + G L +
Sbjct: 112 FGRPAALLAGDALLGLATEVLLDSTSGDAIASARALCAAVRSLIAGQNADLDFEHRADVT 171
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + KT AL+ + GA+ A + ERL FG LG+ FQL DDLL
Sbjct: 172 L----DECLHMADEKTSALLACSTSIGALHVGAPRETVERLHAFGSELGMAFQLVDDLLG 227
Query: 230 CEEDLP 235
D
Sbjct: 228 LWGDPE 233
>gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
Length = 315
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 10/225 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
K I +L +Q++H +A GGK+IR V + +
Sbjct: 1 MKLISELLAQNERHIQRLIQSRHALLSAAAAHLFQAGGKRIRPTFVLLVSQALGGISQSQ 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
R+ E IH SL+HDD+ +D RRG TV+ ++ A++AG+ L + ++
Sbjct: 61 QRLAEITEMIHTASLLHDDV--VDEASKRRGIDTVNTRFSNRIAVLAGDFLFAQSSWYLA 118
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ S+L+ L Q KT +L +
Sbjct: 119 NLNNLEVVKFISKLISDLAEGEMRQTSTQFSTQFELW------AYLEKSFYKTASLFACS 172
Query: 193 CESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ ++++ + + + G++LGI FQ+ DD+LD D+
Sbjct: 173 AKATCMLSNDHEDNHHHKNMYLLGQHLGIAFQIMDDVLDISGDIS 217
>gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
PHSC20C1]
gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
PHSC20C1]
Length = 372
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 66/262 (25%), Gaps = 42/262 (16%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECASLFNVNH 69
+ +D+ L + S + + + +A+ L GGK+ R+
Sbjct: 9 DLVQLKIDEFLAEKQSELNSIAPEL--TAMTDVGGSLLSGGKRFRALFCYWGWQAVAGLP 66
Query: 70 LT-------------------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ + I S PS + + +
Sbjct: 67 SSTGPLDSEVKSEELPGVLLSASALELFHAAALVHDDIMDRSDTRRGSPSAHRRFEQMHR 126
Query: 105 PTVHIQYDEVTAIIAGNGLLTY---AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
E A L + + + + + + M G
Sbjct: 127 DGAWTGNAETYGQSAALLLGDLLLGWSDELLGRGLAMLPRPAALAARREFMTMRTEVMAG 186
Query: 162 GQMLDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
+ + ++ + GA + ++ + LR F
Sbjct: 187 QYLDIHDESAWASYPESEALDRAQRVLIYKSAKYSVEAPLAVGASLGAGTEEQIAALRAF 246
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
G LG+ FQL DD+L D
Sbjct: 247 GLPLGVAFQLRDDVLGIFGDPE 268
>gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
Length = 326
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
Length = 324
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
SK++E I T + + ++ M+++ L + Y + GK++R V A +
Sbjct: 3 SKIKEIQSPIATEMAEFEIKFRQFMKSKVY-LLDKIMGYIVKRKGKQMRPMFVFLSAGVH 61
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ R A IE +H +L+HDD+ +D+ RRG +++ + AI+ G+ LL+
Sbjct: 62 GQINEATYRGAALIELLHTATLVHDDV--VDDANYRRGFFSINALWKNKIAILVGDYLLS 119
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + I S+ + ++ LQ ++ +D + D I K KT
Sbjct: 120 RGLLLSIDNEDFDLLKIVSEAVREMSEGELLQIEKARKLNITEDIYYD------IIKQKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
+L+ C G+ + + E+++ FGE +G+ FQ+ DDL D D+ K
Sbjct: 174 ASLIASCCAVGSRSVNKDDDISEKMKLFGEKVGMAFQIKDDLFDYGTNDIGK 225
>gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98]
gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2]
gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3]
gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188]
gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11]
gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98]
gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
Length = 326
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
Length = 354
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 75/248 (30%), Gaps = 21/248 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ +D +L+ L A + L IR +GGK+IR+ L
Sbjct: 8 ADIIAHVDAVLEQELGTFAHELAGLSPVASELTDPIRAFCVGGKRIRALATWWGYQLAGG 67
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
H + A++E +H +LIHDD+ + +A G+
Sbjct: 68 THPGIAHMAASVELLHAAALIHDDIIDNSDMRRGNPSTHAFFSQMHGSAGFEGDARSFGI 127
Query: 128 FEII---------------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
I +S N+R+ + Q + +
Sbjct: 128 NAAIIAGDVCLGLSEQLFNASGLNVTDPNVRATHDAFRRDVMMGQYLDIRIQAAPVPDSQ 187
Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + K+ + E GA +A A L F LG FQL DD L
Sbjct: 188 IVDRAMEVLTYKSAKYSVEQPFELGARLAGAKPQFVHDLSAFTLPLGQAFQLRDDELGVF 247
Query: 232 ED---LPK 236
D K
Sbjct: 248 GDPQATGK 255
>gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
Length = 326
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + + GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVSLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1]
gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1]
Length = 329
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I L+++ + ++T ++D + + A GGK +R L+ A + + + ++
Sbjct: 13 IRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQI 72
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
I + +D+ RRGK ++ ++ + TA+ AG+ L T+ F++I +
Sbjct: 73 IQLASSIEILHMASLIHDDIIDDSDERRGKISIQARFGKDTAVYAGDLLFTHFFDLILNA 132
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
++ ++ + L GQM + + D K KT AL A E
Sbjct: 133 ISEQDY-----MIKNAHTMHHLLAGELGQMAERFNLSQDFNDYLTNVKGKTAALFRLAAE 187
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
G+ + + + L FGENLGI FQ+ DD+LD K
Sbjct: 188 EGSHFGNGDEQTTQALASFGENLGIAFQIVDDILDYTG--GK 227
>gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6]
gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis
OG1RF]
Length = 326
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ S L ++ + LD L + L ++RY+ L GGK++R L
Sbjct: 64 SFDFESYLSAKARAVHDALDLTLQGLR------CPEVLSESMRYSVLAGGKRLRPVLAIA 117
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ V A+E IH SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG
Sbjct: 118 ACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAG 177
Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
+ LL AFE ++ + + + ++ L G+ G+ GQ+ D+ E V
Sbjct: 178 DALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVS 237
Query: 178 ----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KT L+ A SGA++ E ER+R + LG++ Q+ DD+LD
Sbjct: 238 LGALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGT 297
Query: 234 LP 235
Sbjct: 298 SE 299
>gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis]
Length = 298
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + + H+ L +A R ALLG GK++R L A+ + AL A+E +
Sbjct: 26 VQARLAEVAPAHDGLLSTAAREALLGRGKRVRPVLAMLAAAHVGGDPEDALEYACALEMV 85
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DDLP MD+ +RRG+PT+H ++ E TA++A LL A ++ + +
Sbjct: 86 HAASLVLDDLPCMDDASLRRGQPTLHHRHGEDTAVLAAVALLNQATRLVLQTAAPAETRL 145
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ +L+ + L DE+ + I +KTGAL G ++
Sbjct: 146 AALDLLTQAIGFDGLSEGQMRDLRDDARDRDESALRQINDLKTGALFVATVRGGGLLGGG 205
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ RL FGE +G FQL DDLLD
Sbjct: 206 DAQDLARLSIFGEAIGFAFQLCDDLLDV 233
>gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
Length = 290
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ I+T ++D L + + + + + YAL GGK+IR LV A ++
Sbjct: 4 FEAYRVMIETGIEDSLDEFGPKGFS-----IRAPVEYALTSGGKRIRPMLVCMIAKGLDM 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L AIE IH +LI DDLP MD+ RRG+PTVH +DE +A++A L+ A
Sbjct: 59 -GRDVLDSALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAA 117
Query: 128 FEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ I + ++ D + N G+ G+LGGQ D+ V
Sbjct: 118 YSRIRLNAKKLKSAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQ 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KTGAL AC SG + + ++R F + G++FQ+ DD+LD +D
Sbjct: 178 SIIHKKTGALFEIACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQD 232
>gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
Length = 323
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL+E K I T LDD ++ M++ L Y + GK++R V A
Sbjct: 3 KLEEIKKPIATELDDFEIKFKESMRSSVP-LLDRITHYIVKRKGKQMRPMFVFFAAGACG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + R A +E +H +L+HDD+ +DN Y RRG +V+ + A++ G+ LL+
Sbjct: 62 GINESTHRGAALVELVHTATLVHDDV--VDNSYQRRGFFSVNALWKNKIAVLVGDFLLSK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + I ++ + ++ LQ ++ + + + + + KT
Sbjct: 120 GLSLSVKNQDFEFLRILNEAVTEMSEGELLQMEKARRLDIDEGVYFE------VIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+L+ C GA +A ++ FGE +GI FQ+
Sbjct: 174 SLIASCCACGAASTNAPSELVTKMHDFGEKVGIAFQIK 211
>gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
Length = 326
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii]
gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii]
Length = 342
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 84/229 (36%), Gaps = 22/229 (9%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTE----------CASLFNVNHL 70
L + M +L SA Y LG GK+ R ++ A+ +
Sbjct: 4 LGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAATSDEK 63
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A + +D+ RRG +++ A++AG+ LL A
Sbjct: 64 NWRHHKLAEITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFS 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S+ + + S+++ L +Q + + D + KT +L+
Sbjct: 124 LSTLQNDEVVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYY------LQKTFYKTASLIA 177
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+C+ AI+A + +G +LG+ +QL DDLLD L K
Sbjct: 178 NSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGK 226
>gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides KD131]
gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides WS8N]
gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides KD131]
gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
sphaeroides WS8N]
Length = 278
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L +A+ YA+ GG +IR L+ A+ + + A+E IHC SL+HD
Sbjct: 11 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 70
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ +
Sbjct: 71 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 130
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 131 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 183
Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
G +G FQ+ADDL D D L K
Sbjct: 184 EELGARIGEAFQVADDLRDALCDAATLGK 212
>gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
M21/2]
gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
M21/2]
gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3]
Length = 293
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 34 QHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ A RY+LLGG K+IR+ L + A + AA+E +HCYSLIHDDL
Sbjct: 27 PEESEVCRAARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDL 86
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
P MDN +RRG+P+ H + E TA++AG+ LLT AFE+I++ + + + L
Sbjct: 87 PCMDNDDLRRGRPSCHKAFSESTAMLAGDVLLTEAFEVIANASATPQICVAAARALGAGA 146
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
L + E Q+ +I + KTGAL+ A + GA A A+ + + L
Sbjct: 147 GSRGMVYGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKILAS 206
Query: 213 FGENLGIIFQLADDLLDCEE 232
+ LG++FQ+ DD+LD
Sbjct: 207 YAYGLGLVFQIVDDVLDVTS 226
>gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833]
gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833]
Length = 358
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 20/254 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M + L +D + L + LL A L GGK++R
Sbjct: 1 MTTS-AAPLDVVRPEVDRSIRRFLDRQRPLFFDDPQLATLLDAAEAFLSGGKRLRPAFCY 59
Query: 60 ECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPS-------MDNGYIRRGKPTVHIQ 110
+ A++E + +LIHDD+ M + + R + + +
Sbjct: 60 WGWRAAGGGSDDARLYNAAASLELLQASALIHDDVMDASDVRRGMPSAHRRFERMHLESR 119
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDI 167
+ A N + ++ + + + + H+ L ++ GQ LD+
Sbjct: 120 WHGSAAQFGENAAVLLGNLLLVWAGEMWRTSGLPAEALAVAQPVHDHMLTELMCGQYLDL 179
Query: 168 QDEFIDETQVFMIQKMKTGALMCFA----CESGAIMAHAS--QNEKERLRCFGENLGIIF 221
++ E ++ ++ G ++A S +G+ +GI F
Sbjct: 180 LEQAQGEGTFDSALRVALYKSGKYSVEQPLRLGLLLAAQSRLPWIDTLCAQYGQRVGIAF 239
Query: 222 QLADDLLDCEEDLP 235
QL DD+L D
Sbjct: 240 QLRDDILGVFGDPA 253
>gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1]
gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC]
Length = 293
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ I+T ++D L + + + + + YAL GGK+IR LV A ++
Sbjct: 7 FEAYRVMIETGIEDSLDEFGPKGFS-----IRAPVEYALTSGGKRIRPMLVCMIAKGLDM 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L AIE IH +LI DDLP MD+ RRG+PTVH +DE +A++A L+ A
Sbjct: 62 -GRDVLDSALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAA 120
Query: 128 FEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ I + ++ D + N G+ G+LGGQ D+ V
Sbjct: 121 YSRIRLNAKKLKSAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQ 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KTGAL AC SG + + ++R F + G++FQ+ DD+LD +D
Sbjct: 181 SIIHKKTGALFEIACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQD 235
>gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139]
gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1]
Length = 365
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 64/250 (25%), Gaps = 24/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + L + + +L A R GGK++R +
Sbjct: 12 ADFRDSVSARILSFLDDEKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAAD 71
Query: 68 NHLTA-------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + +S LPS+ + E
Sbjct: 72 QPTEPAGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPSVHRHFEAAHGIAHGDGPAEQ 131
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
L S T + + + GQ+LD+ +
Sbjct: 132 FGFDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMA 191
Query: 175 TQV---------FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+++ + C+ G +A S ++ + FG +G FQ D
Sbjct: 192 GSDSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRD 251
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 252 DLLGVFGDAE 261
>gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
Length = 326
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 8/214 (3%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+L++ A H++ + ++ + + +A GGK +R +S F A
Sbjct: 22 VLMEDAIHLKNKPVEQAVLQMIHA--GGKMLRPAYQLLFSS-FGPEKDRKKATAIAAAIE 78
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D +RRG ++ Q+ A+ AG+ L F+++++ + +K
Sbjct: 79 MLHTATLIHDDIVDEAELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASSMKSLQ 138
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ N GQM + + + KT L +C GA +
Sbjct: 139 MHSKSMESILNG-----ELGQMDNRFNIDLSVADYLEAISGKTAELFALSCAIGAYESGT 193
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S+ E+ G +G+ FQ+ DD+LD +D K
Sbjct: 194 SRKFAEQAGKIGLAIGMAFQIMDDILDYTQDQQK 227
>gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB]
gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB]
Length = 303
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
I+ LD LL + D + +A+R AL GK+IR L+ A +
Sbjct: 18 ASLLNDIEQRLDQLLPVESER------DLVGAAMRDGALAPGKRIRPLLLLLAARDLGCD 71
Query: 69 --HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A LL+
Sbjct: 72 VTPTGLLDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSK 131
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKT 185
AF +++ + + + G + + ++ KT
Sbjct: 132 AFGVVAMAEGLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKT 191
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A AS +E+L F NLG FQL DDL D D K
Sbjct: 192 STLFCASMQMASIVAEASAETREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242
>gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
SKA53]
Length = 293
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
+ + RI+ + + Q +L +A+ YA+ GG +IR ++ A +
Sbjct: 2 KIADRIEATMTAAIAQGQG---GVAPPKLAAALNYAVTPGGARIRPTILMSVAMACGDDR 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AA+E +HC SL+HDDLP D+ +RRGKP +H + E A++AG+ L+ F
Sbjct: 59 PALTNAAAAALELVHCASLVHDDLPCFDDADMRRGKPALHRAFSEPLAVLAGDSLIIMGF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + ++ + L GM G E + + + KTGAL
Sbjct: 119 HLLARA----AGDAPARAITLLDILGTRTGMPFGICAGQGWESESQIDLSAYHQAKTGAL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A + GA+ A E E G +G FQ+ADDL D D L K
Sbjct: 175 FIAATQMGAVAAG---QEAEPWAELGARIGEAFQVADDLRDALCDDATLGK 222
>gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f]
gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f]
Length = 860
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 32 QTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ + L AIR LGG K++R L A V + AA E H SL+
Sbjct: 588 PAETSPHDLDAIRAYALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAASELFHTASLLL 647
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DDLP+ DN RRG+PT H +DE + +A +++ F ++ +++
Sbjct: 648 DDLPAQDNATTRRGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVVEVVAY 707
Query: 150 LTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+G + + GQ LD+ D + T + + ++K+ + A ++
Sbjct: 708 AGSTLGPERLCRGQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMMLLGRP 767
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE-----------DLPK 236
E + + + GI+FQ+ DD+LD D K
Sbjct: 768 DREISLVERYARHAGIVFQIRDDVLDLTAADDLLGKDTGHDTGK 811
>gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 335
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 13/240 (5%)
Query: 1 MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M + + E S + + L + + L RYALL GK +R ++
Sbjct: 1 MTAD--ALIHEVTSSPVAADIRRALDAR----WSGGGEPLDEISRYALLSPGKLLRPLML 54
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A+E +H SL+HDD+ +D RRG+ +VH +Y AII
Sbjct: 55 VASAEAVGGDREAVMPAALAVEYLHAASLVHDDI--IDGDDTRRGRASVHARYGVADAII 112
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL---THNIGLQGMLGGQMLDIQDEFIDET 175
G+ L+ F ++ D + + +L+ G
Sbjct: 113 TGDALIIRLFGSLAECPVPDADVLSAVRILARAGDDLCRGQMREALLVPPAPGALGSGLA 172
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +KTGAL AC++GA++ + E + F E+ G+ FQ+ DDLL D
Sbjct: 173 AYLGMAALKTGALFRGACQAGAVLGGGTPGEVGIVAEFAEHTGLAFQMYDDLLPFLGDPA 232
>gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
Length = 293
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+ I+ L+ L+ + ++ A+++ + GGK+ R +V A L ++
Sbjct: 9 RLINNELERLVNSVNTI------PKVKKALKHVISAGGKRTRPLIVLLSAKLCGGDYKDV 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + A+E IH SL+HDD+ +D G +RR +H++YD AI+ G+ L++ + E++S
Sbjct: 63 MDMALAVELIHTASLVHDDI--IDRGVMRRNVKALHVEYDISLAILVGDWLISKSVELVS 120
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
SQ++ + + E E F KT +L +
Sbjct: 121 --------KYPSQIIKEFAKTGMMMSEGEVLDVYSPYERFTEDTYFKCITFKTASLFAYG 172
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ A++ + E++ +G NLGI +QL DDLL+
Sbjct: 173 AKNSAMVVCDDEKAWEKMFEYGLNLGIAYQLVDDLLEY 210
>gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]
Length = 420
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 27/236 (11%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
+L M +L SA Y LG GK+ R ++ A+ + +
Sbjct: 91 SILANRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATAIDAPISRTPPDTSL 150
Query: 79 IECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L +D+ RRG +++ A++AG+ L
Sbjct: 151 DTLSTELRLRQQTIAEITKMIHVASLLHDDVLDDAETRRGIGSLNFVMGNKLAVLAGDFL 210
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A ++S K ++ + ++ L +Q + ++ +T
Sbjct: 211 LSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTTTSDQRCSMEYYMQKT------YY 264
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
T +L+ +C++ A++A + +G+NLG+ FQL DD+LD L K
Sbjct: 265 MTASLISNSCKAIALLAGQTSEVAMLAYEYGKNLGLAFQLIDDVLDFTGTSASLGK 320
>gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
Length = 292
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L +A+ YA+ GG +IR L+ A+ + + A+E IHC SL+HD
Sbjct: 25 SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 84
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ +
Sbjct: 85 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 144
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 145 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 197
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 198 EELGARIGEAFQVADDLRDALCDAE 222
>gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10]
Length = 326
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+DT++ +QT H + + A G K +R L+ A + +
Sbjct: 17 LAEVDTLIQH-------TIQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQT 69
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + ++IE +H +LI ++D+ +RRG ++ ++ + A+ AG+ L T F+++
Sbjct: 70 INLASSIEILHMATLI--HDDTIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLML 127
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ + +R+ +S N GQM + + T K KT AL A
Sbjct: 128 DTTTEHEYLVRNAQTMSHILNG-----ELGQMAERFNLEQTFTDYLNDIKGKTAALFRLA 182
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E GA A + + L FGENLGI FQ+ DDLLD
Sbjct: 183 AEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLLDYTG 222
>gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris]
Length = 312
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 83/235 (35%), Positives = 119/235 (50%), Gaps = 14/235 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+LQ K I+ LD LL Q T+ ND + A+R A L GK+IR L+ A
Sbjct: 14 ELQSMRKTIENRLDSLLPQ------TEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLG 67
Query: 67 VNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E IH SL DD+P MDN +RRG+PT+H ++ E AI+A LL
Sbjct: 68 CAPAHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALL 127
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-- 182
+ AF ++S L D R+Q + L+ +G QG++ GQ D+++ + I
Sbjct: 128 SKAFGVVS-SAEGLSDAGRAQAVSELSAAVGTQGLVKGQYQDLREGCEPRST-EAIHTTN 185
Query: 183 -MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KTG L + + AI A+AS + RLR F + G FQL DDL+D K
Sbjct: 186 DLKTGVLFSASLQLAAIAANASVAARNRLRSFALDFGQAFQLLDDLIDGLATTGK 240
>gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 413
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 76/251 (30%), Gaps = 24/251 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALLGGKKIRSFLVTECASLF 65
++ + +LD L + + D R+ L GGK+ RS V
Sbjct: 29 EDVPAAVGRLLDRFLAERVARAAALDPVFAHDIAERVARFTLDGGKRTRSQFVWWAHRAC 88
Query: 66 -------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK----PTVH 108
+ + S + P++ + P
Sbjct: 89 GGPAAGAEAALRVGAALELIQTCALVHDDVMDGSRLRRGRPALHTDVSAQYADAVLPAPG 148
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
++ E AI+AG+ L +A ++++ R + + S + G
Sbjct: 149 TRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRVREVWSCLRMEMVAGQYLDIQGQAT 208
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + E GA +A A + L G +G+ FQL DDL
Sbjct: 209 SSHSEARAMRAACLKSALYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLH 268
Query: 229 DCEED---LPK 236
D E+ K
Sbjct: 269 DVFEEPRRTGK 279
>gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 322
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
++ +++ ++ D + + + ++Y + GGK++R L A +
Sbjct: 10 KDMNKVNLLIMDRICSNVTIIP--------DVVKYLIFSGGKRLRPMLTVATALMLEYRG 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + AIE IH +L+HDD+ +D+ +RRGK + + +++ G+ LL+ AF
Sbjct: 62 NNHVLLACAIEFIHTATLLHDDV--VDDSALRRGKAAARLVWGNQASVLVGDFLLSQAFS 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ K+Q + S L Q+ ++ + E + K KT AL
Sbjct: 120 MVIETKSQEALKVLSL------VACTLSEGELRQLSISKNLNVTEEDYLYVIKSKTAALF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A E ++++ A + ++ L+ +G NLGI FQL DD LD +
Sbjct: 174 VAALEVSSLISGAQDSVRDALKSYGTNLGIAFQLVDDALDYRGE 217
>gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525]
Length = 357
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 65/238 (27%), Gaps = 14/238 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFLVTECASLFN 66
+ +R++ L L L + GGK++R
Sbjct: 24 DDLLQRVEDKLASFLTAERDRYAAMDERALAAVDALTDLVTSGGKRVRPTFCITGYLAAG 83
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------QYDEVTA 116
+ V AA + +DN RRGKPT+H E
Sbjct: 84 GDPRDPGIVAAAAGLEMLHVSALIHDDILDNSAQRRGKPTIHTLYGDLHDSHGWRGESRR 143
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
G G+L ++ S + + + G + +
Sbjct: 144 FGEGIGILIGNLALVYSQELVCQAPPAVLAEWHRLCSEVNIGQCLDVCAAAEFSADPQLS 203
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + GA A + +GE +G FQL DDLLD D
Sbjct: 204 RLVALIKSGRYTIHRPLVMGANAASR-PDLAAAYVEYGEAVGEAFQLRDDLLDAFGDS 260
>gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 348
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 25/251 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + +L+ L D +TA ++ ++ + + + L GGK++R
Sbjct: 1 MTGAITEQLRRY-------LHDRRAETA-YIGDDYSGLIAALEEFVLNGGKRLRPAFAYW 52
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG----------------YIRRGK 104
+ ++ +D+ + R
Sbjct: 53 GWRAVATEAPDDQALLLFSALELLHACALVHDDVIDDSATRRGRPTTHVRFASLHRDRQW 112
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
++ AI+ G+ L +A +I+ + R + + + L G +
Sbjct: 113 QGSPERFGMSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRTEVLGGQYLDIV 172
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + + + + + GA A + + FG +LG+ FQL
Sbjct: 173 AEASAAASIASAMNVDTFKTACYTVSRPLQLGAAAADR-PDVHDLFSQFGTDLGVAFQLR 231
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 232 DDVLGVFGDPA 242
>gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187]
gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165]
gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137]
gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2]
gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1]
gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3]
gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1]
gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase
[Propionibacterium acnes 266]
Length = 365
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 65/250 (26%), Gaps = 24/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + L + + +L A R GGK++R +
Sbjct: 12 ADFRDSVSARILSFLDDEKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAAD 71
Query: 68 NHLTA-------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + + +S LPS+ + E
Sbjct: 72 QPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQ 131
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
L S T + + + GQ+LD+ +
Sbjct: 132 FGCDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMA 191
Query: 175 TQV---------FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+++ + C+ G +A S ++ + FG +G FQ D
Sbjct: 192 GSDSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRD 251
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 252 DLLGVFGDAE 261
>gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4]
gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4]
Length = 359
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 67/251 (26%), Gaps = 35/251 (13%)
Query: 9 LQENSKRID------TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + I+ +D+ + + A + + L GGK++R
Sbjct: 17 LATLRRHIEGRRTVVAAIDERVDRLAGLLS-----------DFVLDGGKRMRPRFALAGW 65
Query: 63 SLFNVNHLT--------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ + + I S P++ +
Sbjct: 66 AASRPDAGPAPEEVVTACAALELIQACALVHDDIVDASDTRRGRPTVHRAIESAHRRDGW 125
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ + A + + + +L GQMLDI
Sbjct: 126 DGDAARYGVSQAILVGDLALSWADEMFVTSGVDPAALGRALGPWHAMKTEVLSGQMLDIL 185
Query: 169 DEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E T ++ + GA +A A+ LR FG +G FQL
Sbjct: 186 AEASGATDEQTPARVNRFKTAAYTVERPLHIGAELAGATDETVAALREFGVAVGQAFQLR 245
Query: 225 DDLLDCEEDLP 235
DDLL D
Sbjct: 246 DDLLGVFGDPE 256
>gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 368
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 16 IDTILDDLLLQTASHMQTQHND---RLLSAIRYAL------------LGGKKIRSFLVTE 60
++ +L + ++ + A Y GGK +R L
Sbjct: 18 VEEVLRRVRELCVPALRAAVAELEAPARRAAEYHFGWVDEAGRRVEANGGKALRPALTLL 77
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
CA A+ A+E +H +SL+HDD+ +D RR + TV + TAI+AG
Sbjct: 78 CAEAAGGQADEAVPAAVAVELVHNFSLLHDDV--IDGDRTRRHRATVWAVFGRPTAILAG 135
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ LL+ AFE+++ ++ + + + L M + + +
Sbjct: 136 DSLLSLAFEVLA-------ESRPAGVGVLAEAVTRLNDGQLRDMDLETRVDVSLAECRDM 188
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KTGALM AC GA A R FG LG+ FQ ADDLL D K
Sbjct: 189 AARKTGALMAAACRLGAESGGADGERAGRFADFGGALGLAFQAADDLLGIWGDAQVTGK 247
>gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
17982]
gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
17982]
Length = 337
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + ++ L D + + A+ GGK++R L CA
Sbjct: 11 PDLESRITPGLEVVERRLLDAVSSSRDLTDELTR-------HLAVAGGKRMRPLLTLVCA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L +V A + L MD+ RRG P+ + AI+AG+
Sbjct: 64 QLGEPERALDEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +++S ++ + + + +
Sbjct: 124 ILFARASLLVASLGPEMVAHHARTFERLCEGQLNETFGPTDGADRVDFY-------LQVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ A GA+++ A + + + FGE +G+ FQ+ADD+LD
Sbjct: 177 ADKTGSLVSTAASFGALLSGAGKLMADVVSDFGEKVGVAFQIADDVLDLAS 227
>gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus]
Length = 513
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 31/244 (12%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA--LLGGKKIRSFLVTECASLFNVNHLT 71
+ + L L S + T+H L +A +Y L GGKKIR +V + N N
Sbjct: 186 ELVSAELAGLSDGIKSLIGTEHA-VLNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQ 244
Query: 72 ALRVGAAIECI-------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ ++ +D RRG P+V+ + AI+
Sbjct: 245 VRPDVQPGTELVNPLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAIL 304
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ LL + ++ ++ + S ++ ++ G++L ++
Sbjct: 305 AGDFLLARSSMSLARLRSLESVELMSA---------AIEHLVKGEVLQMRPTEDGGGAFE 355
Query: 179 MIQKMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ M +C++ A++ +E +G+ +G+ FQL DD+LD E +
Sbjct: 356 YYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTF 415
Query: 234 -LPK 236
L K
Sbjct: 416 TLGK 419
>gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
Length = 325
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 18/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLV 58
+ + + E + + + + LL+ I Y + GK++R V
Sbjct: 3 ITSQIKKPILEEMELFEKKFQQSMSSKIA---------LLNRITYYVVNRKGKQMRPMFV 53
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + + A+ ++ +D+ RRG +++ + A++
Sbjct: 54 FLTAKMISGGTVLERTYRGALVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVL 113
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL+ + I S + ++ LQ ++ + + +
Sbjct: 114 VGDYLLSKGLLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYE----- 168
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA + + E++R FGE +G+ FQ+ DDL D ED K
Sbjct: 169 -IIRQKTATLIAACCALGAQSVSNDEVQVEKMRKFGELIGMAFQIKDDLFDYTEDAIGK 226
>gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
Length = 362
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 66/239 (27%), Gaps = 22/239 (9%)
Query: 19 ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV- 75
L + L + + + L+ I + GGK++R+ L N T+ +
Sbjct: 20 ELQEFLAVKRNELAEISVDAPALIDTISGLVTGGKRMRALLCYWGWRGAGGNPETSSPIT 79
Query: 76 ------------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA------- 116
+ I S I PS+ + + + E
Sbjct: 80 TAGAALELFQAAALIHDDIIDRSDIRRGAPSVHRQFSQLHQRQRWALDPERFGHAAAILA 139
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
F I+ P Q ++ + + + L + E E
Sbjct: 140 GDLCLSFSEEVFSSINVPAPQKARSVFNTMRAEVMAGQYLDILEEVAGPSRGPENAVERA 199
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I+ G +A A N F LG FQL DD+L D
Sbjct: 200 QSIIRYKSAKYSSEHPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDMLGVFGDPA 258
>gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
Length = 300
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
E RI ++ L + Q + L+ AI Y++ GGK+IR L+ E +
Sbjct: 4 DEKLARIGQTIEGL------YAQKVVSADLIEAILYSVNAGGKRIRPLLLLELLEGLGLE 57
Query: 69 HLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V AA+E IH SLIHDDLP+MD+ RRG+ T H ++ E AI+AG+ L +
Sbjct: 58 LTEAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEAMAILAGDSLFLDS 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +I+ + + LSL + + + I ++ I KTG
Sbjct: 118 YALIAEAALPSQIKVNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQNIHANKTGK 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L+ + + ++A +Q ++E+LR G+ LG+ FQ+ DD+LD +L K
Sbjct: 178 LLTYPFIAAGLIAEVAQPQQEKLRKIGQLLGLAFQVRDDILDITANFEELGK 229
>gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463]
Length = 289
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVG 76
++DD L + + N ++ + Y++ GGK++R L + +R+
Sbjct: 14 VIDDYLAKHLA--SEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRIV 71
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE IH YSLIHDDLP+MDN RRGK T H ++ E AI+AG+ LL + I+
Sbjct: 72 CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGSQ 131
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + +G Q + + + + ++ +KTG L+ + E
Sbjct: 132 SAQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKF-INQMEWLKTGCLIQASVEMA 190
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ A AS E+ +L F + G +Q+ DDL+D
Sbjct: 191 AVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDV 224
>gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 340
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 83/238 (34%), Gaps = 19/238 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTA 72
++ +LD ++ + ++ +L + GGK+ R +V + A
Sbjct: 1 MNGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAA 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK---------------PTVHIQYDEVTAI 117
VGAA E +H ++HDD+ D + A+
Sbjct: 61 AHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAAV 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
IAG+ L A+ +I + + +L G L + + ++
Sbjct: 121 IAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDEI 180
Query: 178 FMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+++ ++GA++A A L F ++GI +Q+ DD+L D
Sbjct: 181 LRMERLKTAVYSFEAPLQAGAVLAGARPEVVAALGDFDRDIGIAYQVVDDVLGVFGDE 238
>gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 279
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
K ID LD +L + A+ Y+L+ GGK++R L+ F ++
Sbjct: 2 IKDIDARLDAILEYY------PKTSVVREAMTYSLMSGGKRLRPRLLLAMLEDFGCDYKL 55
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L A+E +H YSL+HDDLP+MD+ +RR KPT H + E AI+AG+ LLT AF +
Sbjct: 56 GLNPACALEMVHTYSLVHDDLPAMDDDDLRRFKPTNHKVFGEGVAILAGDALLTGAFTAL 115
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S ++ L ++ + + L N G GM+ GQ LDI D + +KTG L
Sbjct: 116 S--QSSLDSDVVGKCLEILARNAGNNGMILGQELDIDDHIDHIDDLVACYNLKTGCLFAG 173
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
A E ++A ++ G LG+ FQ DDLL+
Sbjct: 174 AFEMAVVIAGKDS-YQKLAHDLGLTLGVAFQFQDDLLEVT 212
>gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium
HF186_25m_30B18]
gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium
HF186_25m_13D19]
Length = 356
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 9/236 (3%)
Query: 6 PSKLQENSKRIDT-ILDDLLLQTASHMQTQHNDRLLSAIR-----YALLGGKKIRSFLVT 59
S L+ +R L+ L H + L +R + GGK++R+ +V
Sbjct: 18 QSILRRREERTQAHALERGLEAVRDHALQTAHAHLNEPLRSMVVQHLQTGGKQVRARIVL 77
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E A +T + + AA E +H +L+HDDL D +RRG+P V +++ E AI
Sbjct: 78 EAARALGEEPMTLVPIAAACELLHNATLVHDDLQ--DGDTVRRGEPAVWVRHGEAQAINV 135
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L + + G L +
Sbjct: 136 GDAMLMLPTLALEQMLLMPSVRWYIATAFTRRATETACGQALELELLGRGWLGRGP-YLR 194
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K+G E+ A+ A + LG +FQ+ DD+LD D
Sbjct: 195 AALGKSGPFFSLPIETAALAAGRQPTRARAIGDALLALGALFQIRDDVLDLFGDKG 250
>gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 306
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
L + + +R++ L+ + + L A+RYA+LG GK++R LV
Sbjct: 15 FDLSAWSAQALQRVEEALE-------AWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + ALR ++E IH YSL+HDD+P MDN +RRGKPTVH+Q+ + A++AG+
Sbjct: 68 AEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGD 127
Query: 122 GLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L AFE+++ R +L+ L + E ++ +
Sbjct: 128 ALQALAFELLTPEDDVPEAMQARLCRLLARAAGADGMAGGQAIDLASVGIALSEDELRRM 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
++KTGAL+ + GA A+ + L +G LG+ FQ+
Sbjct: 188 HRLKTGALLQSSVLMGAACGAAAPAAWDALSRYGAALGLAFQV 230
>gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
Length = 321
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 11/233 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L L++N++ IDT L+ M L A + L GGK++R + A+
Sbjct: 3 LEEYLEKNAELIDTRLES--------MYGSLPGELDKASAHLLCAGGKRLRPSVTMLAAN 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ A + + MD RRG PTVH ++DE TAI+AG+ L
Sbjct: 55 IVEKGSSDSVIPAALALEVTHTFTLV-HDDIMDGDVARRGVPTVHTKWDEPTAILAGDVL 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
AFE+I+ + + +L+ T +G + +D+ + +
Sbjct: 114 YAEAFELITMADADPVAKVEAVAILARTCLEICRGQHEDMSFEKRDDVDPY-EYLEMVGQ 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L A G I+A + L +G G+ FQ+ DD++D D K
Sbjct: 173 KTGKLYAAAAAIGGILAGGDARQVGALHDWGYLSGVAFQIQDDVIDLMADSEK 225
>gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147]
gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786]
Length = 330
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 12 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 123 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226
>gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
Length = 277
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 12 NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FN 66
N ++ D IL D ++ A + ++ L ++ YA GK+IR + E +
Sbjct: 2 NKEKFDKILIADKNIIDMAMIKKFDEDNPLSESLIYASDSGKRIRPVVFLETIKMLLGEG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A+E +H YSL+HDD+P MDN RRGK TVH +Y E AI+ G+ LL+Y
Sbjct: 62 SVDEKLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLSY 121
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AFEII + + + L+ + G + + + + K KT
Sbjct: 122 AFEIILDLSIYDQRFLEAGKYLAKACGKDG-MIKGQVFDIKSKKDENIEYILDVYKNKTA 180
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L A A+ A+ +++ E+L + LG+ FQL DD+LD
Sbjct: 181 RLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILD 223
>gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
Length = 323
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M+ + + + +D + L + Y + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAEVDAKIQAQLNSEVVLINQLGF--------YIVSSGGKRLRPMLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ +I S+ + LQ M +
Sbjct: 111 VGDYIYTRSFQMMTSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTE------DSYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L + + AI+A A + L+ +G LG FQL DD+LD D K+
Sbjct: 165 QVIYSKTARLFEASTQIAAIIAQAPAEIELALQEYGRYLGTAFQLIDDVLDYIAD-GKE 222
>gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147]
Length = 248
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+R L L + AA+E IH YSL+HDD+P MD+ +RRGKPTVH++YD
Sbjct: 1 MRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYD 60
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
E TA++ G+ L + AF ++ D + + L G GM GGQ +D+
Sbjct: 61 EATALLVGDALQSQAFVALTDAAALPLDRQPAL-VRELALASGSIGMAGGQAIDLASVGH 119
Query: 173 DETQV--FMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229
++ + +MKTGAL+ + GA+ + L + +G+ FQ+ DD+LD
Sbjct: 120 ALSRDALETMHRMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILD 179
Query: 230 CEEDLP 235
D
Sbjct: 180 VTTDSA 185
>gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 368
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 70/242 (28%), Gaps = 20/242 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +L++ L + + +++AI GGK++R
Sbjct: 23 ADVAQLLEEFLAAKSIEVGQITTSAVEIVNAITSLTRGGKRLRPLFAFWGYLGAGGQAED 82
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI---------IAGNG 122
V + + +DN RRG+P+VH +++
Sbjct: 83 RDIVRLGVALELFQAAALIHDDIIDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGMAS 142
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---------LDIQDEFID 173
+ +S + + N ++ GQ +
Sbjct: 143 AILTGDLCLSLSEEVFSEISSLTAQARTIFNQMRTQVMAGQYLDVLEESAGPAYDPKEAV 202
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +++ G +A AS++ E F LG FQL DD+L D
Sbjct: 203 KRARTIVRFKSAKYSTENPFLLGGALAGASESLMEHYSAFALPLGEAFQLRDDVLGVFGD 262
Query: 234 LP 235
Sbjct: 263 PE 264
>gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
Length = 306
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 21/229 (9%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ++I+ ++D L + S + + + ++ GK +RS L A+ +
Sbjct: 2 EALEQINQKIEDFLEELESPIVLELSSKIQR--------GKMLRSKLALNIAT---ESEE 50
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L L +DN +RR KP+++ + AI+ G+ L + AF
Sbjct: 51 CILLCAIIEMIQSASLL---HDDVIDNATMRRSKPSINAIAGDKNAIMLGDILYSKAFCE 107
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + R T IG + + +E + + + KT +L+
Sbjct: 108 LTQFQENFPMIPRIVANAVTTLAIG----EMEDVELAKQFNANEAKYLTMVEHKTASLIE 163
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ A ++ +Q E + R +G NLGI FQ+ DD+LD + L K
Sbjct: 164 STAYAAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLDIVSSTQTLGK 212
>gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
Length = 329
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 84/223 (37%), Gaps = 7/223 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+++I L L + + + Y GGK +R LV A + +
Sbjct: 5 ARQIQRTLLAALPDPEAAPRPELAAYARLLRDYPERGGKMLRGRLVVLTARAYGDDTAAL 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
V AA+E + L+HDD+ + RRG+P +H A+ AG+ L + +++
Sbjct: 65 G-VAAALELFQNWVLVHDDIEDDSDE--RRGRPALHRLVPMPLALNAGDALHAAMWRLLA 121
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ K + ++ T + + D ++ +++
Sbjct: 122 EAGARRKVLLEFAELVETTASGQHLDLSWTLEGRFDLTPDDYLEM--VRRKAAYYTAVAP 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A + G LG+ FQ+ DD+L+ E D
Sbjct: 180 LRLGALVAGRMPD--PAFARAGLELGVAFQIVDDVLNLEGDPA 220
>gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
Length = 347
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 12/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
++I +I+ D + + ++ + GGK++R + C+ + N
Sbjct: 29 QQIQSIIADDFEIMDKQVYGSLSSKVKLVMSVSQHVINAGGKRMRPLISLLCSRICNDQP 88
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A AI ++ +D +RRGKPT + +D TA++ G+ L+ +F
Sbjct: 89 SQAAMHLGAITE-MLHTATLVHDDVIDASGMRRGKPTANATWDNATAVLVGDYLIARSFN 147
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + + S + LQ D E I KT L
Sbjct: 148 LLVGFGSLPLLQLFSDGTCDIAEGEVLQLQHQ------HDPKATEADYMKIIDGKTSRLF 201
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + AI+ + + FG++ G FQ+ DD+LD D
Sbjct: 202 MMASQGVAILENR-PEYNDAFAKFGQHFGNAFQIIDDVLDFVGDSE 246
>gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
Length = 323
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++ + D L + Y + GG K+IR + A +
Sbjct: 13 DMAAVNATILDQLNSDVVLINQLG--------HYIISGGGKRIRPMIAVLVARALHYKGS 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ V A IE IH +L+HDD+ +D +RRGK T + + +++ G+ + T AF++
Sbjct: 65 KHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRAFQM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ + S + LQ M ++ ++ + KT L
Sbjct: 123 MTGLESLRVLTLMSAATNVIAEGEVLQLMNCNNPDITEENYMQ------VIYSKTARLFE 176
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A +S A++A AS+ ++ L+ +G LG FQL DDLLD D L K
Sbjct: 177 AAAQSAAVLAEASEEQELALQNYGRYLGTAFQLIDDLLDYSSDGTTLGK 225
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E +H SLIHDDLP MDN +RRGKPT H + E A++AG+ LL+++FE ++ +
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
+ + + L +IG +G++ GQ++DI E + + + I KT AL+ A G
Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
AI+ + E E+LR F +G++FQ+ DD+LD ++L K
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGK 163
>gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 326
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 10/223 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLT 71
R+ ++ + + ++ + + + GGK +R + +V+
Sbjct: 10 RMQAKINQICALIDKRVAVRNPAIETAVVDLSTAGGKYLRPAFFYLFSEFGQEESVDEDK 69
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L++ ++E +H +LIHDD+ +D+ +RRG+ T+ Q+ + A+ G+ L T FE+I
Sbjct: 70 LLKIATSLEILHMATLIHDDI--IDDSPLRRGQETIQSQFGKDVAVYTGDLLFTVFFELI 127
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + L M ++ KT L
Sbjct: 128 LESMANTPYMTINAKTMKKILMGELNQMHL-----QFNQEQTIRSYLHSISGKTAELFRL 182
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + GA A G N+G+ FQ+ DD+LD D
Sbjct: 183 ASKEGAYFGGADGKIVALAGRIGFNIGMAFQILDDILDYTADQ 225
>gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98]
gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14]
gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91]
gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9]
gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210]
gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894]
gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC
13177]
gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112]
gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215]
gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
Length = 330
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 12 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 229
>gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri
FSL N1-067]
Length = 291
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 71/189 (37%), Gaps = 7/189 (3%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK +R A + V A + +D+ +RRG PT+
Sbjct: 10 AGGKLLRPAFALLSAQA-GPDFDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTI 68
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H +Y A+ G+ L F+I+S+ + +++ + + + QM
Sbjct: 69 HSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTS 123
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + KT L +C SGA + AS+ + G LG+ FQ+ DD+
Sbjct: 124 YKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDV 183
Query: 228 LDCEE-DLP 235
LD D
Sbjct: 184 LDYTSTDEG 192
>gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
Length = 300
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 13/217 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L+ L + + L Y GGK++R L+ E A + + + +
Sbjct: 4 LEQLERSITEFLMPEVKTVL-EIGNYIASAGGKRVRPILMLETARMLGGDTERLIPLAVG 62
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE IH SL+HDD+ +D +RRG+P+ + + ++ G+ + A + S
Sbjct: 63 IEYIHMASLLHDDV--VDGADVRRGRPSANRVFGNPIVVLTGDYMYARALWLYSLYGNMK 120
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I S+ ++ + L+ + G+++D I KTGAL + GA+
Sbjct: 121 SIEIVSRAVMQMAEGQVLELLHIGKIIDE-------ETYLRIVDGKTGALFGASMGVGAL 173
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
M+ E G +G FQ+ DD LD D
Sbjct: 174 MSGYPG--FEEFYRMGVKVGRAFQMVDDALDYIGDQK 208
>gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1]
gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 291
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+++ L D L + L I YALLGG K++R LV A +
Sbjct: 3 YFSVYRSKVEKKLRDSLGDFGNTQGG-----LRDPIEYALLGGGKRVRPLLVGLFAEGIH 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L AIE IH +LI DDLP MD+ +RRGKP+VH +DE +A++A L+
Sbjct: 58 -KERDVLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116
Query: 127 AFEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
A+ I Q + ++ + G+ G+LGGQ D+ + V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDVFFHDFSKENV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LP 235
I K KTGAL AC SG + + + F E+ G++FQ+ DDL D +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEE 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured
Verrucomicrobiales bacterium HF0130_14P10]
Length = 344
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 80/220 (36%), Gaps = 14/220 (6%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D LL A+H D + A+ GGK+IR LV C ++ + A+
Sbjct: 31 FDTYLLGRANHFDPAVRDLAVQAL---ASGGKRIRPALVHACG--IGNLAVSENLLKASS 85
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D+ IRR + TV+ AI+ G+ L +A E+ S +
Sbjct: 86 IVEFVHVATLVHDDVLDDASIRRDRQTVYADRGATAAILLGDALFAHALEMASEFQGNEV 145
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ Q L G ++ +I + KT L +C GA +
Sbjct: 146 CRWVAAATRRTCSGEIQQSFLRGDFTLTS------SRYKLIIEAKTAELFTVSCRLGAHV 199
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A FG LG+ +Q+ DDL+D D K
Sbjct: 200 AGLDNATSALACEFGRRLGLAYQIYDDLVDVFGREADFGK 239
>gi|159040415|ref|YP_001539668.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157919250|gb|ABW00678.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 384
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 74/258 (28%), Gaps = 23/258 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFL 57
+ L + E +D LDD L + ++A L GGK++R
Sbjct: 25 VRASLAAYATEIVTAVDDTLDDFLSAEMDTLTAIDQAVGGFAVTARDSVLAGGKRVRPTF 84
Query: 58 VTECAS--LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG------------ 103
L + A + + D + R
Sbjct: 85 AYWGWRGVAGGGEPLPPVLPALAALELLHAFALIHDDVMDSSATRRGRPTAHVAVAAQHA 144
Query: 104 ---KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
+ ++ E AI+ G+ L +A +++ + + + G
Sbjct: 145 AAGRRGDPGKFGETVAILVGDLCLVWADRLLARAALPPARLLEVRRCYDQMRVETIAGQY 204
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAH--ASQNEKERLRCFGENL 217
+ + + + + KT + + GA +A A +G +
Sbjct: 205 LDVLGESDPTNWSVDRALQVARYKTASYTVQWPLLFGARLAGVVAEPPLIAAYTRYGLAV 264
Query: 218 GIIFQLADDLLDCEEDLP 235
G FQL DDLL D
Sbjct: 265 GEAFQLCDDLLGVYGDPA 282
>gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
U32]
gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
U32]
Length = 363
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 25/248 (10%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFLVTECASLFNVNHL 70
++ L L + + + + A+R + L GGK++R +
Sbjct: 12 AHVERALAGFLDRAGTAILGTEPTVAAGIDALRGFVLGGGKRLRPTFAWWGWRGAGGDPA 71
Query: 71 TA---------------LRVGAAIECIHCYSLIHDDLPSMDNG----YIRRGKPTVHIQY 111
+ + S P++ + RG +
Sbjct: 72 GPDAEGVLQAVASLELIQACALIHDDLIDSSDSRRGNPTVHIAGAKLHADRGWLGSPATF 131
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
TA++ G+ L +A ++ + + ++ L G +
Sbjct: 132 GLATAVLVGDLALAWADDMFADADLPAETLAAARPAWRAMRTEVLAGQYLDVRTQATGDA 191
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
E + + + + GA + A+ L FG +G+ FQL DDLL
Sbjct: 192 SVEAALKIDRLKTAAYTVQRPLHLGAALGGAAPELIATLLEFGGEVGVAFQLRDDLLGVF 251
Query: 232 ED---LPK 236
D K
Sbjct: 252 GDPSVTGK 259
>gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 335
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 1/203 (0%)
Query: 34 QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ L SA R+ + GK +R+ ++ A+ + A E +H +SL+ DD+
Sbjct: 30 DSDLPLYSAARHYMGKGKHLRALMLLLACGATGGEPSNAIDIAAGHEILHTFSLVQDDIM 89
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
+ D L + I+ + + RS+L+ +
Sbjct: 90 DKSEKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNAKRSRLLKEILEL 149
Query: 154 IGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ L+ + +F E + KT C G I+A S+ +
Sbjct: 150 GMVICEGQFLDLNFERKFSLAEDDYLDMIYKKTAVFFEKVCTIGGIIADTSEENIHSISE 209
Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
G+ LG+ FQ+ DD+L D
Sbjct: 210 MGKCLGMAFQIKDDMLSFFGDEK 232
>gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
Length = 337
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + ++ L D + + A+ GGK++R L CA
Sbjct: 11 PDLESRITPGLEVVERRLLDAVSSSRDLTDELTR-------HLAVAGGKRMRPLLTLVCA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L +V A + L MD+ RRG P+ + AI+AG+
Sbjct: 64 QLGEPERGLDEQVITAATAVELTHLASLYHDDVMDSAPTRRGVPSAQHLWGNNRAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +++S ++ + + + +
Sbjct: 124 ILFARASLLVASLGPEMVAHHARTFERLCEGQLNETFGPTDGADRVDFY-------LQVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ A GA+++ A Q + + FGE +G+ FQ+ADD+LD
Sbjct: 177 ADKTGSLVSTAASFGALLSGAGQLMADVVSDFGEKVGVAFQIADDVLDLAS 227
>gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43]
Length = 330
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 12 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 229
>gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Janibacter sp. HTCC2649]
gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase
[Janibacter sp. HTCC2649]
Length = 366
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 23/249 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFN- 66
+ R+ T +D L A + D LL + L GGK++R+ +
Sbjct: 13 ADLRTRVQTCIDGELRHQAVVLHELGPDVTDLLDRVGSLLAGGKRLRAAFLYWGHRAAGR 72
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQYD 112
+ +R+ A+E +LIHDD+ + + RG ++
Sbjct: 73 ADSDELVRLATAMEFFQAAALIHDDVMDDSDTRRGMPAAHRALAAVHTERGWGGDDARFG 132
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
AI+AGN LT+ E++++ ++D R T + Q + + D
Sbjct: 133 VAGAILAGNLCLTWTDELVATSGLGVEDLARGRVVFDRMRTQLMAGQFLDVVDSVRPWDG 192
Query: 171 FIDETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
++ Q++ + GA + + L +G +LG FQL DD
Sbjct: 193 LPASERIERAQRVIRYKSAKYTVEHPLLIGATAGGLGEADLAHLSSYGLDLGHAFQLRDD 252
Query: 227 LLDCEEDLP 235
LL D
Sbjct: 253 LLGVFGDPE 261
>gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
ambofaciens ATCC 23877]
Length = 380
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 60/236 (25%), Gaps = 16/236 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--- 72
+ +LD L + + D GGK++R+ + A
Sbjct: 32 LQEVLDARLRHSRAVDPVFARDVADRVAALVARGGKRLRTAFACCGWRAAGGSGDPAAVL 91
Query: 73 ---------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + SL P++ R E A
Sbjct: 92 RVGAALELLQACALVHDDVMDGSLQRRGAPALHVELARGHWAAGMHGSAETFGTSAAVLA 151
Query: 124 LT----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+A ++++ R + G + + +
Sbjct: 152 GDLALVWADDLLTETALGTPHGPRLHEEWRAMRTEMVAGQYLDLHAQAARSSGVDEALTV 211
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA +A A + E LR G G+ FQL DDLL D
Sbjct: 212 ATLKSALYTVARPLALGASLAGADEGTVEALRMAGRCAGLAFQLRDDLLGAFGDPA 267
>gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria
monocytogenes 1816]
Length = 302
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 71/189 (37%), Gaps = 7/189 (3%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK +R A ++ V A + +D+ +RRG PT+
Sbjct: 21 AGGKLLRPAFALLSAQA-GPDYDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTI 79
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H +Y A+ G+ L F+I+S+ + +++ + + L M
Sbjct: 80 HSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMR-----TS 134
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + KT L +C SGA + A++ + G LG+ FQ+ DD+
Sbjct: 135 YKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDV 194
Query: 228 LDCEE-DLP 235
LD D
Sbjct: 195 LDYTSTDEG 203
>gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70]
gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s]
gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923]
gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2]
gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150]
gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023]
Length = 291
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+++ L D L + L I YALLGG K++R LV A +
Sbjct: 3 YFSVYRSKVEKKLRDSLGDFGNTQGG-----LRDPIEYALLGGGKRVRPLLVGLFAEGVH 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L AIE IH +LI DDLP MD+ +RRGKP+VH +DE +A++A L+
Sbjct: 58 -KERDVLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116
Query: 127 AFEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
A+ I Q + ++ + G+ G+LGGQ DI + V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LP 235
I K KTGAL AC SG + + + F E+ G++FQ+ DDL D +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEE 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 340
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 12/237 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
E S+ + + + + ++ Q + +R Y G R L+ +F
Sbjct: 2 EFSEYVAKRRNAIYSKITDYIPLQEPEEHYKIVREYIDRQGNYRRPILLMLTGEMFGAPI 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ AA + + LI +MD+ RRG PT+H Y + AI A + + ++
Sbjct: 62 EKLVQLAAAQQLSEEWLLI--QDDAMDDSEFRRGGPTLHKMYGWIHAINASDTINVTMWK 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK----- 184
I+ + + + I + D ++ +
Sbjct: 120 ILKDYIMKFDPKNGNAIYDKFYDMIKYTIEGQYIENKFINNTKDLSKASESMYFRIADGK 179
Query: 185 -TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ + GA+ A A + + G N GI FQ+ DD+LD D KK
Sbjct: 180 TCYYTIYGPMQIGAMAAGAPEKAISAFKEIGTNTGIAFQIMDDILDMAGDEKTFGKK 236
>gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
DX253]
gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
DX253]
Length = 276
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH 69
++ L++++ + L + + AL GGK++R + +
Sbjct: 2 ARRTLVEDRLEEVVERVE-------PRELSEQLAHTALSGGKRVRPTVAMLACEAAGGDA 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+ G IE +H SL+ DD+ +D +RRG + +Y AIIA +G+L AFE
Sbjct: 55 ENAVDFGVGIELVHDASLVVDDI--IDRSDVRRGTESAWAEYGYGRAIIASDGMLGEAFE 112
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ S S + + G+ ++ ++++ + + KTGAL
Sbjct: 113 LFS-----------SDPRAMEVVAESMIELGMGEASELVATPSNQSEYMELARRKTGALF 161
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
A E GAI A A + + E +GI FQ+ DD+LD DL K
Sbjct: 162 RAAAELGAIAADADPETIDAFGEYAERVGIAFQIRDDVLDATADPDDLGK 211
>gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides
fragilis 3_1_12]
Length = 276
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+L+ + + AIE H Y+L+HDDL MD +RRGK TVH +++ TAI++
Sbjct: 1 MAYNLYKEDVTSVYDPATAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILS 58
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ ++ A++ ++S ++ + L+ Q M G + + E +
Sbjct: 59 GDAMMVLAYQYMASCSSEYLKEVMDLFSLTALEICEGQQMDMGF---ESRDDVKEEEYLE 115
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++KT L+ + + GAI+ AS+ + E L FG +G+ FQL DDLLD D
Sbjct: 116 MIRLKTAVLLAASLKIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSA 171
>gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
Length = 323
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 88/233 (37%), Gaps = 17/233 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L + + ++ L ++ + ++ + ++ ++ GGK +R +
Sbjct: 6 PALQADLSASLQLMEKSLK---------LKNKEVEQAILSMIHS--GGKLLRPAYQLLFS 54
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + V A ++ +D+ RR PT+ ++ A+ AG+
Sbjct: 55 -AYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDY 113
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F++++ + +K + + GQM D + +
Sbjct: 114 LFVCCFKLMADYASSMKSLQMNSRSMEKILAG-----ELGQMSKRYDLSVTVEDYLENIR 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L +C GA + S + R GE +G+ FQ+ DD+LD +D
Sbjct: 169 GKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDVLDYSQDAA 221
>gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
Length = 324
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
++ + + + + ++++ RL SAI L GK +R LV A +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+ A
Sbjct: 64 TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I S L L+ Q + + ++ + + K KT L
Sbjct: 122 IRSIQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCY------LQVIKKKTATL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ E GAI + AS R FGE LG FQ+ DD+ D ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225
>gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 324
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
++ + + + + ++++ RL SAI L GK +R LV A +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+ A
Sbjct: 64 TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I S L L+ Q + + ++ + + K KT L
Sbjct: 122 IRSIQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCY------LQVIKKKTATL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ E GAI + AS R FGE LG FQ+ DD+ D ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225
>gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
DSM 14838]
Length = 324
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 5 LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ ++L + K D L LL + SH++ ++ GK +R L+
Sbjct: 11 IAAELDDFKKLFDNSLTSSNFLLNEVISHIRQKN--------------GKMMRPILLLLV 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L+ +L ++E +H SL+HDD+ +D RRG+ +V+ Y+ A++ G+
Sbjct: 57 AKLYGRICPESLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIYNNKVAVLVGD 114
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A + ++ S+L +L+ LQ ++ + E F +
Sbjct: 115 YLLATALVQVGKTHNYAIIDVVSRLGQNLSEGELLQL------SNVSNLQFSEEIYFDVI 168
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ KT L +SGA+ + + E R FGE +G+ FQ+ DD+ D
Sbjct: 169 RKKTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFDYY 218
>gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
D13]
gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
D13]
Length = 324
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
++ + + + + ++++ RL SAI L GK +R LV A +
Sbjct: 5 RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+ A
Sbjct: 64 TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I S L L+ Q + + ++ + + K KT L
Sbjct: 122 IRSIQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCY------LQVIKKKTATL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ E GAI + AS R FGE LG FQ+ DD+ D ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225
>gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029]
gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
pneumoniae AR39]
gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
TW-183]
gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029]
gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
pneumoniae AR39]
gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
TW-183]
gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN]
Length = 289
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 16/236 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
L I++ ++ L H + S + YAL GG K++R LV A +
Sbjct: 5 LDTYRPSIESAIEKAL---EGFGPIGHP--IRSPVEYALQGGGKRLRPGLVCMMAQGLGL 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + A+E +H +LI DDLP MDN RRG+PTVH +DE TA++A L+ A
Sbjct: 60 N-HDVMDSALAVEFVHTSTLIADDLPCMDNDDERRGRPTVHKAFDEATALLASYALIPAA 118
Query: 128 FEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ + + D + + NIG G+LGGQ D+ + V
Sbjct: 119 YSHLRLNAKKLKEQGCDPREIDIAYNIIGDITDKNIGCSGVLGGQYDDMFFSNRGQEHVQ 178
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
I KTG+L AC SG + + F N G++FQ+ DD D ++D
Sbjct: 179 SIMIKKTGSLFEIACISGWLFGGGDPQFAPIITSFSNNFGLLFQIKDDFSDLQKDS 234
>gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56']
gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56']
Length = 370
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 73/240 (30%), Gaps = 12/240 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQT---QHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L R+D LD A+ +Q + + A L GGK+ R+ L+
Sbjct: 30 FLDFLSSIRPRVDAALDQRWRDKAASVQRYGREVEAMVSEARSLTLRGGKRFRAGLLVAA 89
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-----VTA 116
+ + A + + + +D +RRG TVH+ E
Sbjct: 90 YQGVAPDAPLGPAIDAGVALELLQTYLLIQDDWIDGDTVRRGDRTVHVALTETLGDPHLG 149
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ + S + L L + ++ GQ LD+
Sbjct: 150 ASSAILAGDLTWSFALSTLAGADAPPATTLAAVLLFCKMHEDVVIGQHLDVVGRA---ED 206
Query: 177 VFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
V + + GA +A A L F +G+ FQL DDLL
Sbjct: 207 VEQMHALKTGSYTVRGPLALGATLAGAPAETVAALERFAAPVGVAFQLRDDLLGTFGSAA 266
>gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
Length = 291
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+++ L D L + L I YALLGG K++R LV A +
Sbjct: 3 YFSVYRSKVEKKLRDSLGDFGNTQGG-----LRDPIEYALLGGGKRVRPLLVGLFAEGVH 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L AIE IH +LI DDLP MD+ +RRGKP+VH +DE +A++A L+
Sbjct: 58 -KERDVLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116
Query: 127 AFEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
A+ I Q + ++ + G+ G+LGGQ DI + V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGIGGILGGQYEDIFFHDFSKENV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LP 235
I K KTGAL AC SG + + + F E+ G++FQ+ DDL D +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEE 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
Length = 332
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + ++ ++I+ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 14 AQLLAPIADDMEQINRVIRQSLSSDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 GALGDGSSHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE++ + +
Sbjct: 125 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDESRYMQVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + + +G +G FQ+ DD LD
Sbjct: 179 YKTAKLFEASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 231
>gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49]
Length = 331
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX]
gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276]
gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s]
gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis
D/UW-3/CX]
gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768]
gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222]
gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074]
gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301]
gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC]
gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC]
Length = 291
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 18/241 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+++ L D L + L I YALLGG K++R LV A +
Sbjct: 3 YFSVYRSKVEKKLRDSLGDFGNTQGG-----LRDPIEYALLGGGKRVRPLLVGLFAEGVH 57
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L AIE IH +LI DDLP MD+ +RRGKP+VH +DE +A++A L+
Sbjct: 58 -KERDVLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116
Query: 127 AFEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
A+ I Q + ++ + G+ G+LGGQ DI + V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENV 176
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LP 235
I K KTGAL AC SG + + + F E+ G++FQ+ DDL D +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQDDQEE 236
Query: 236 K 236
K
Sbjct: 237 K 237
>gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440]
gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
Length = 360
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 69/241 (28%), Gaps = 18/241 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
+R+D L D L+ + M L A+ + L GGK++R
Sbjct: 16 RQRVDKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFAYWGYRGAGGID 75
Query: 70 LTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AA+E + +LIHDDL + + +A G+
Sbjct: 76 TEQVATALAALEFVQASALIHDDLIDRSDTRRGEPAVHLRFTARHRSAGWDGDAAGFGDA 135
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------- 179
I L + L + + + + V
Sbjct: 136 AAILLGDLCLVWSDELLHSAGLDPHTVARARPIFDQMRTEVTVGQYLDVLTQATGDTSVE 195
Query: 180 -----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + GA +A A+ +G LG FQL DD+L D
Sbjct: 196 RAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPLGEAFQLRDDVLGIFGDP 255
Query: 235 P 235
Sbjct: 256 A 256
>gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 334
Score = 85.7 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 25/241 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + ++ L + T + + L++A GGK++R L
Sbjct: 10 DAALERVVADGLVEVERRLAAAVSSTE-ILADAPSRHLVNA------GGKRMRPALALLT 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + L A+E H +L HDD+ MD+ RRG P+ H + AI+ G+
Sbjct: 63 AQLGSGTSDAVLEAAVAVELTHLATLYHDDV--MDSAPTRRGAPSAHEVWGNSVAILTGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + + GQ+ + E V
Sbjct: 121 LLFARASRLVS----------ELGPDAVRVQAETFERLCLGQLHETIGPQDGEDAVEHYL 170
Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KTG+L+ + + GA+ + + + +GE +G+ FQLADD++D D
Sbjct: 171 DVLAGKTGSLIAASAQYGAMFSGVGADALGTVVRYGEKVGVAFQLADDVIDLLSDADVTG 230
Query: 236 K 236
K
Sbjct: 231 K 231
>gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 327
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 83/224 (37%), Gaps = 6/224 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ I L + L + + + Y GGK +R L+ A A
Sbjct: 2 REAIRRYLLERLPDPKAAPRPELAQYAQLLRDYPERGGKLLRGQLLLATAQAHGAPPERA 61
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L AA+E + LIHDD+ D +RRG+PT+H Y A+ AG+ L + ++
Sbjct: 62 LPAAAALELFQNWVLIHDDIE--DASEMRRGRPTLHRLYSVPLALNAGDALHAVMWRVLL 119
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ T + + D + M+++
Sbjct: 120 EAAYPTPVLQEFARLVETTARGQHLDLAWIEAERFDLSPEDYLE--MVRQKAAYYTAVAP 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ GA++A + G LG+ FQ+ DD+L+ E + K
Sbjct: 178 LKLGALVAGHTP--HPAFEPAGLQLGVAFQIIDDVLNLEGNPDK 219
>gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 310
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK+IR + A N + V A IE IH +L+HDD+ +D +RRGK T +
Sbjct: 30 GGKRIRPMISILSARALNYKGDQHIIVAALIEFIHTATLLHDDV--VDKSDLRRGKKTAN 87
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++ G+ + T AF++++ + + S ++ Q M
Sbjct: 88 TVFGNSASVLVGDFIYTRAFQMMTDLGSMRILKVMSSATNVISEGEVQQLMYC------N 141
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ I E + KT L A +S AI+A AS ++ L+ +G LG +QL DDLL
Sbjct: 142 NVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQESALQSYGCYLGTTYQLIDDLL 201
Query: 229 DC 230
D
Sbjct: 202 DY 203
>gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
Length = 350
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 18/236 (7%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTAL 73
+I+ L D + ++ + + Y L GGK+IR+ L+ + + +
Sbjct: 13 KIEESLMDFFKEKKKGLEHWSSREACEILEEYTLRGGKRIRAILMIVGYKMMGGKNDEII 72
Query: 74 RVGAAIECIHCYSLIHDDLPS--------------MDNGYIRRGKPTVHIQYDEVTAIIA 119
+ +++E I Y LIHDD+ + +++ G I++ E AIIA
Sbjct: 73 KASSSLELIQSYLLIHDDIMDESDLRRGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIA 132
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ YA EI+SS + +++ L+ G + DEF +E + +
Sbjct: 133 GDLANAYAMEILSSSDFPAELKVKAIHKLNEIIEYTGYGQIIDIYSGALDEFKEEDLLLL 192
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + G I+A E + +GI FQL DD+L
Sbjct: 193 HKYKTARYTIEGPLALGMILAGKEPEGIE---NYAIPVGIAFQLQDDILGLFGSEE 245
>gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 312
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L KRI+ L + L + + N + GGK+IR L+ +
Sbjct: 7 LDSIRKRIELALSENLDSSVDTILKAGNSTIE-------AGGKRIRPLLLVYLVESLGGD 59
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ +G IE IH SL+HDD+ +D RRGKP+V+ + + A++ G+ L A
Sbjct: 60 VDKAIILGCGIEYIHIASLLHDDV--VDKADSRRGKPSVNKVFGQEAAVLTGDYLYAKAL 117
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ +I S+ ++++ L+ G ++D F I KT L
Sbjct: 118 FLYANYGNAKMIDILSKAVMNMAEGQLLELKSIGSIIDE-------KTYFDIIDGKTAYL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ GA++++ E E+ G LG FQL DD LD E D K
Sbjct: 171 IGACFGVGALISNY--EEYEKFFDIGLKLGRAFQLIDDALDYEVDSQK 216
>gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
DSM 44702]
Length = 373
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 72/263 (27%), Gaps = 30/263 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTE 60
L L + +D LD + + D + + ++ GGK++R
Sbjct: 9 TLDRPLADVPSAVDAELDRFFHDRHAEIDDLDPVVADGVDALEQFVTGGGKRLRPLFAWA 68
Query: 61 CASLF--------------------NVNHLTALRVGAAIECIHCYSLIHDDLPS----MD 96
+ + I +S P+ +
Sbjct: 69 GVRAALDGGGGTLSGSTGPEDLLRAVGSLEFIQACALIHDDIIDHSDTRRGRPTTHRRFE 128
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ G + Y E AI+ G+ +A +++ R++ +
Sbjct: 129 ASHRGNGWSGDAVGYGESQAILVGDLAFAWADDMLVDSGVDAASLARAREPWRKMRTEVI 188
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
G + L+ + + GA + A + LR G
Sbjct: 189 AGQMLDIALENSGSEDPAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVDLLRTAGRE 248
Query: 217 LGIIFQLADDLLDCEED---LPK 236
+GI FQL DD L D K
Sbjct: 249 IGIAFQLEDDHLGVFGDPQVTGK 271
>gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
Length = 331
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 15/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPITSDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227
>gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a]
gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a]
gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
52237]
gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
Length = 332
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 14 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 125 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 231
>gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
17931]
gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
17931]
Length = 380
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 84/271 (30%), Gaps = 35/271 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
++ G+ S+ + + ++ + + Q + + +D LL AI GGK++R+ L
Sbjct: 10 LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69
Query: 59 TECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ +R GAA+E +LIHDD+ + + +
Sbjct: 70 YWGWRGAGGDSILEGSAPAPIIRAGAALELFQSAALIHDDIIDRSDTRRGKPSVHKKFET 129
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ G+ I + L + + + G + + +
Sbjct: 130 QHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEVMA 189
Query: 172 IDETQVF--------------MIQKMKTGALMCFACESGAIMAHA---------SQNEKE 208
V ++ ++CE ++ A
Sbjct: 190 GQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALALTAIAHQDHPILG 249
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ R FG LG FQL DD L + K
Sbjct: 250 KYRAFGLPLGEGFQLRDDELGVFGEPSATGK 280
>gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803]
gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803]
Length = 325
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 9/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++ +D + M ++ L Y + GK++R V A + +
Sbjct: 4 ISQIKLPVEKEMDLFEKKFFESMSSKVA-LLNRITHYIVNRKGKQMRPMFVFLVAKMVSE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 63 GSVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ + + D I + KT
Sbjct: 123 LLLSIDNNDFDLLKIISVAVKEMSEGELLQIEKARRLDITEAVYYD------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
L+ C GA NE ++R FGE +G+ FQ+ DDL D + + K
Sbjct: 177 LIAACCSLGAASVKPESNEIAKMRRFGELIGMAFQIKDDLFDYGTQKIGK 226
>gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242]
gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii
DSM 6242]
Length = 300
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGKK+R ++ + + AIE IH SLIHDD+ +D G +RRG +
Sbjct: 39 SGGKKVRPIILLLASRICGKGSENCTNAALAIELIHSASLIHDDI--LDEGVMRRGVESA 96
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H ++ A++AG+ +++ + E+IS T + +
Sbjct: 97 HKKFGPAAAMLAGDYMISKSIELISIYSTPVVQ--------EFGRAGMAMAEGETIDIKS 148
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
E E F KT +L + GA +A A + +L+ +G LG +Q+ DDL
Sbjct: 149 TSEDFAEMNYFDCIDKKTASLFAASAVMGAYIAGADEKTASKLKNYGRKLGRAYQIVDDL 208
Query: 228 LDCEEDLPKK 237
L+ +++ K
Sbjct: 209 LEYTQNIDNK 218
>gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis]
Length = 379
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 77/243 (31%), Gaps = 20/243 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------- 65
+ +D L + + + A+ +D R+ L GGK+ RS V
Sbjct: 3 RLLDRFLAERVARAAALDPVFAHDIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAE 62
Query: 66 -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK----PTVHIQYDEVTA 116
+ + S + P++ + P ++ E A
Sbjct: 63 AALRVGAALELIQTCALVHDDVMDGSRLRRGRPALHTDVSAQYADAVLPAPGTRFGEAAA 122
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ L +A ++++ R + + S + G +
Sbjct: 123 ILAGDLALAWADDVVADTDLAPDPGRRVREVWSCLRMEMVAGQYLDIQGQATSSHSEARA 182
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + E GA +A A + L G +G+ FQL DDL D E+
Sbjct: 183 MRAACLKSALYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLHDVFEEPRR 242
Query: 234 LPK 236
K
Sbjct: 243 TGK 245
>gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
lyrata]
gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
lyrata]
Length = 865
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIHCYS 86
+ ++ + +A + GGK++R LV A L + LT ++
Sbjct: 565 VGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHT 624
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
+D +RRGK TVH + A++AG+ + A +++ + + SQ+
Sbjct: 625 ASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLQVIKLISQV 684
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ Q + D ++ + KT +L+ + + AI +
Sbjct: 685 IKDFASGEIKQA------SSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEV 738
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235
E++ FG+NLG+ FQ+ DD+LD +
Sbjct: 739 AEQMYQFGKNLGLSFQVVDDILDFTQSTE 767
>gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
Length = 330
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 11/227 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
K I LD +++ + + N ++ I GGKK+R FL+ AS + +
Sbjct: 5 DRYYKNIVKKLDKNIIEKTTTHREIINSAIVDLID---GGGKKLRPFLMFLAASFGDYDK 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L +G++IE +H SL+HDD+ +D+ +RRGK T ++ + A+ G+ L++ F+
Sbjct: 62 KELLDLGSSIEILHMASLLHDDI--IDDADLRRGKVTAQKRFGKNEAVFIGDFLISRTFD 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + ++ + + Q ++ + KT L
Sbjct: 120 ILFEYLDKETLIKMNKNLRLICEGEIEQAEKKYDFNISIRDYYRR------IRHKTALLF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ GA ++ + L G +G+ FQ+ DD+LD + K
Sbjct: 174 AISSYLGAYVSGIRGKKLNILYKLGLEIGMAFQIQDDILDFNGEQAK 220
>gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
Length = 403
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 74/250 (29%), Gaps = 23/250 (9%)
Query: 10 QENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + ++ L +L + A+ + + + L R+ + GGK+IR
Sbjct: 50 ADVAGAVERELAAVLADRLRDAAAVAPEVAEALRVLERFVVGGGKRIRPTFAWWGWRGAG 109
Query: 67 VNHLTA-------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ A + + S P++ + R + +
Sbjct: 110 GDPAAAGAALRAVSALELLQACALVHDDLIDDSATRRGRPTVHVEFAGRHRDGGWSGPAD 169
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A L A + + +L GQ LD+ +
Sbjct: 170 RFGAAAAILLGDIALAWADDTLQSSGLDAAALARAGAPWRAMRTEVLCGQYLDVLAQATA 229
Query: 174 ETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+T ++ + GA +A A R FG ++GI FQL DD+L
Sbjct: 230 DTSTAAAMRVNRFKTAAYTVERPLHIGAALAGADDRLVAAYRGFGTDIGIAFQLRDDMLG 289
Query: 230 CEED---LPK 236
D K
Sbjct: 290 VFGDPDVTGK 299
>gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
Length = 328
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 1 MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
MN + + + + + L ++T H L + GK++R LV
Sbjct: 5 MNLIDTIKQPILQEMQLFRETFAEALKTDNPMLETVHEYVLQKS-------GKQLRPMLV 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + + A+E +H SLIHDD+ +D+ RRGKP+++ ++ AI+
Sbjct: 58 LLSAKLCGHVNQNTVDGALALELLHTASLIHDDV--VDDTLERRGKPSINARWTNKIAIL 115
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+G+ +L+ A + + + + + L+ LQ ++Q E
Sbjct: 116 SGDYILSKALVCATKTNSLPVLKSIANIGMQLSDGELLQL------SNVQVLNASEENYL 169
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + KT L E G + +A+++ RLR FGE LGI FQ+ DD+ D
Sbjct: 170 TIIRKKTALLFSTCTEVGGLSVNAAEDTLVRLRNFGEYLGICFQIKDDIFDY 221
>gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv]
gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
(POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium
tuberculosis H37Rv]
gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
H37Ra]
Length = 350
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 21 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 81 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 139 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 197 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250
>gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 372
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 26/258 (10%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTEC 61
L + ++ ++ L + L + T +A L GGK++R
Sbjct: 17 LAAYTRDLVTAVEQTLAEFLDAEVDALATIDPAMGGFAATARDCVLAGGKRVRPTFGYWG 76
Query: 62 AS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT-------------- 106
+ + + A ++ MD+ RRG+PT
Sbjct: 77 WRGAASGDEPLHRVLPALATLELLHTFALVHDDVMDHSATRRGRPTAHVAMAAQHAAAGR 136
Query: 107 --VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
++ E A++ G+ L +A ++++ + + + G +
Sbjct: 137 CGDSGRFGEAVAVLIGDLCLVWADQLLARAALPASRLLDVRRGYDRMRVETIAGQYLDIL 196
Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNE--KERLRCFGENLGIIF 221
+ E + + + KT + GA +A + +G +G F
Sbjct: 197 GEADPENWSVDRALRVARYKTASYTVQRPLLFGASLAGVDGGTPLTDAYTRYGLAVGEAF 256
Query: 222 QLADDLLDCEED---LPK 236
QL DDLL D K
Sbjct: 257 QLRDDLLGVYGDPTATGK 274
>gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
Length = 297
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 87/226 (38%), Gaps = 30/226 (13%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG---GKKIRSFLVTECASLFNVNH 69
+ ID I+ + LL+ A I L GKK+RS L+ A +
Sbjct: 1 MQEIDKIIQNYLLELA-----------YEPILTMLSKTNTGKKLRSKLLLSIA---GESQ 46
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + +D +RRG +++ ++ A++ G+ L + AF
Sbjct: 47 KAYVLCAIIEL---IHLASLLHDDIIDESELRRGARSINAEFGAKNALMLGDILYSKAFY 103
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + ++ + + + + + ++ D+ + KT L+
Sbjct: 104 ELSKQEAKISQILSNAVCKLAIGELM-------DVNLSKEFNPDKEAYLTMIYHKTAVLI 156
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A +N +G+NLG+ FQ+ DD+LD D
Sbjct: 157 EASARCGALLAKLDEN---AFAKYGKNLGLAFQIVDDILDITGDEA 199
>gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
DelRiverFos06H03]
Length = 304
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECI 82
T RL++A+R+A+ GG +IR L A+ N A+E +
Sbjct: 13 THFEQAAGTGAPPRLVAAMRHAVFSGGARIRPQLCMAVATACGDNAPHLTDAAAVALELM 72
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
HC SL+HDD+P+ DN RRG PTVH + E A++AG+GL+ A+ ++ Q D +
Sbjct: 73 HCASLVHDDMPAFDNADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLLQAGVQQPDRL 132
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + G + E + Q+ KTGAL A +GA+
Sbjct: 133 VALMDNLTAGVG----LPHGIVAGQAWECETSADLGQYQRAKTGALFVSATCAGALSCGV 188
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ L G+ LG +Q+ADD+ D D
Sbjct: 189 APEPWAFL---GQYLGEAYQVADDIRDVIADAA 218
>gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
pacificum DSM 12653]
gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
pacificum DSM 12653]
Length = 322
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
++ + +D LL + + GK +R V A N + L + AAIE +
Sbjct: 21 IMKKRVKSSNKLISDILLDMVNNS---GKMLRPAFVIISAKFGNYDRKKILPLAAAIEML 77
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H +L+HDD+ +DN IRR KPT+ +Y + A+ G+ L + +F ++S
Sbjct: 78 HMATLVHDDI--IDNALIRRSKPTIQAEYGKDYAVFIGDFLFSQSFLLLSDNINVANLKK 135
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S+++ + Q D I KT AL + GA ++
Sbjct: 136 VSKVVSRICKGEI------DQFESRYDINITINDYLKRIAAKTAALFALSFYVGAYESNC 189
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + L G N+GI FQ+ DD+LD +
Sbjct: 190 GEELAKILGSIGYNIGIAFQIIDDILDYTGEES 222
>gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
Length = 350
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 21 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ +
Sbjct: 81 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLRD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 139 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 197 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250
>gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4]
gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4]
gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
Length = 324
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KLQ+ ID ++ + N L + Y GK +R L A LF
Sbjct: 3 KLQQIKLPIDKEFEEF-RRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + L ++E +H SL+HDD+ +D RRG+ +V+ Y+ +++ G+ +L
Sbjct: 62 EINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLAT 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + + + ++ + L +L+ +Q +I E + + + KT
Sbjct: 120 SLKHSAMTREITIVDLVACLGQNLSEGEIIQL------ANINASEFSEEVYYDVIRKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL + E+GAI HAS + R FGE +GI FQ+ DD+ D ++ K
Sbjct: 174 ALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIKDDIFDYYSSDEIGK 225
>gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
14796]
gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
14796]
Length = 314
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 23/231 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L+ + K + L +L + L +A + L GGK+IR LV A N
Sbjct: 9 ELKSHIKLSEIELARILETEV--------ETLRNASLHLLEAGGKRIRPTLVFLSALCVN 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++ A +E IH +LIHDD+ +D +RRG +V+ +Y AI++G+ +L
Sbjct: 61 QDIEKVIKYAAVVEGIHLATLIHDDV--IDESNVRRGILSVNGKYGFKVAILSGDFILAK 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+S + + + ++ + M G+++ +D F + I +
Sbjct: 119 ITHFLSLLENKEPVRLMAE---------VIMRMAEGEVMQQEDLFKIVSIERYIIRCTNK 169
Query: 187 ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ S A + +++ FG NLGI FQ+ DD+LD ++ K
Sbjct: 170 TARLIS--SSAFLGSIDVLDKRNIFAEFGLNLGIAFQIIDDILDFTGEVKK 218
>gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
Length = 304
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDD 91
Q RL A+ Y+ GG +IR ++ A + + AA+E +HC SL+HDD
Sbjct: 37 QTPARLADALDYSTSPGGARIRPTILMSVALACGDDRPELSDAAAAALEIMHCASLVHDD 96
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
LP D+ +RRGKP+VH Y E A++AG+ L+ +FEI++ + ++
Sbjct: 97 LPCFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILARVAECDAARANALILALAR 156
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ G+ GQ + + + + KTGAL A + GAI A
Sbjct: 157 RSGMPNGICAGQGWESEPT----VDLEAYHRSKTGALFIAATQMGAIAAGHEPE---PWY 209
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 210 ELGARIGAAFQVADDLRDALLDAE 233
>gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus]
Length = 357
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 65/238 (27%), Gaps = 14/238 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFLVTECASLFN 66
+ +R++ L L L + GGK++R
Sbjct: 24 DDLLQRVEDKLASFLTAERDRYAAMDERALAAVDALTDLVTSGGKRVRPTFCITGYLAAG 83
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------QYDEVTA 116
+ V AA + +DN RRGKPT+H E
Sbjct: 84 GDAGDPGIVAAAAGLEMLHVSALIHDDILDNSAQRRGKPTIHTLYGDLHDSHGWRGESRR 143
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
G G+L ++ S + + + G + E
Sbjct: 144 FGEGIGILIGNLALVYSQELVCQAPPAVLAEWHRLCSEVNIGQCLDVCAAAEFSADPELS 203
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + GA A + +GE +G FQL DDLLD D
Sbjct: 204 RLVALIKSGRYTIHRPLVMGANAASR-PDLAAAYVEYGEAVGEAFQLRDDLLDAFGDS 260
>gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 397
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 18/243 (7%)
Query: 8 KLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
L N + ++T L+ L+ + + + ++ +R + GGK++R L
Sbjct: 48 DLLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAG 107
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA--------- 116
A V AA ++ MD+ RRGKPTVH +
Sbjct: 108 GGAGDMAAVVQAAASLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAAHHSALRGQEAAS 167
Query: 117 -------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
I+ G+ L ++ E++ + ++ + G
Sbjct: 168 HLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLDLCAAGDP 227
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + GA +A A E + LG FQL DDLL
Sbjct: 228 TLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDLLG 287
Query: 230 CEE 232
Sbjct: 288 VYG 290
>gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 336
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 13/238 (5%)
Query: 1 MNGGLPSKL---QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56
M+ SKL + + + L + + + + + + GK +R
Sbjct: 1 MSIPFFSKLRSQKHYLQLVKPELKQV-SEFVEAQSSCFDPEVADYMETVCQSKGKMLRPA 59
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV A +R+GA +E +H SL+HDD+ +D RR + T + + A
Sbjct: 60 LVLLVAGATGGIKPAHIRLGALLEMVHLASLVHDDV--IDEADKRRDEATANALWGNSLA 117
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L ++A + + + + + ++ Q + D + +
Sbjct: 118 VLLGDVLFSHAMVLGTEFGSTEFCRRLANTVRNVCQGEVAQS------SRLYDLSMTREE 171
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
F I + KT +L A ++ + +E L G+ LG+ +Q+ DD LD D
Sbjct: 172 YFEIIRKKTASLFSAATGGAGWISGVTPEVEESLYQLGDLLGVAYQIYDDCLDMVGDE 229
>gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans]
Length = 315
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
GGK++R L A L VG A ++ +D +
Sbjct: 24 AHLVAAGGKRLRPLLTLASARLCGYQPGPDHQRHVGLAACVEFIHTATLLHDDVVDESTL 83
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG + + + +++ G+ L +F+++++ + I S ++ LQ ++
Sbjct: 84 RRGLASANAVFGNKASVLVGDFLFARSFQLMTADGSLKVMAILSDASATIAEGEVLQMVV 143
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + KT AL AC GA++A + E+E L FG NLG+
Sbjct: 144 QNDLTTPV------ERYLEVIHGKTAALFAAACRVGAVVAERPEAEEEALERFGTNLGMA 197
Query: 221 FQLADDLLDCEED---LPK 236
FQL DD LD D L K
Sbjct: 198 FQLVDDALDYAADQQVLGK 216
>gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97]
gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987]
gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
Haarlem]
gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506]
gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475]
gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
(POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
Haarlem]
gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
Length = 350
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 21 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 81 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 139 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 197 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250
>gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens]
Length = 385
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 73/238 (30%), Gaps = 19/238 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ L +L + +T L ++ + GGK IR ++ + + A
Sbjct: 46 FEDRLAQVLAEARKRSRTVSAQYGQLWDSLTHMATGGKLIRPRMLLDAHAALGGRDEHAA 105
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA----------------I 117
A + +L+ D ++ R E + I
Sbjct: 106 VDAACAMQLLHIALVIHDDVIDNDTIRRGEATISGEFASEAMSRGALRRDANAWGIATSI 165
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ +LT + +++ + + T G L + E + V
Sbjct: 166 LGGDLILTLSHSLLARLDIEDTKRRAILDIFDDTVVESAAGEHSDVWLSLHLEGANSPDV 225
Query: 178 FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + A++A A + L +G+I+QL DD+L D
Sbjct: 226 LAMVDQKTAVYSFQAPLLIAAVLAGADSGLIDDLANISRQIGVIYQLRDDVLGLFGDE 283
>gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax]
Length = 422
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 13/232 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
+KL++ + L L + + L S Y G GK IR +V A
Sbjct: 97 AKLKDPFTLANKDLQSLFDDIRKELF-VTKEELKSLCDYYFDGKGKAIRPIIVILMARAL 155
Query: 66 NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N++ + A+ ++ +D RRGK T++ + E AI+AG
Sbjct: 156 NIHSNRAGDLLPGQRALAMISEMIHTASLVHDDVIDGSDKRRGKRTINDMWGERKAILAG 215
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L+ A +++ + SQ++ L + M G + + F +
Sbjct: 216 DLILSAASVLLARIGNNAVVKVMSQVIEDLVRG---EFMQLGSKENENERFKHYLEKTF- 271
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT +L+ +C++ +I+ + E +G+N+GI FQL DD+LD
Sbjct: 272 --KKTASLIANSCKAVSILVTSDPEVHEIAYQYGKNVGIAFQLVDDVLDFTS 321
>gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
RM3195]
gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
RM3195]
Length = 297
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 87/226 (38%), Gaps = 30/226 (13%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG---GKKIRSFLVTECASLFNVNH 69
+ ID I+ + LL+ A I L GKK+RS L+ A +
Sbjct: 1 MQEIDKIIQNYLLELA-----------YEPILTMLSKTNTGKKLRSKLLLSIA---GESQ 46
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + +D +RRG +++ ++ A++ G+ L + AF
Sbjct: 47 KAYVLCAIIEL---IHLASLLHDDIIDESELRRGARSINAEFGAKNALMLGDILYSKAFY 103
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + ++ + + + + + + D+ + KT L+
Sbjct: 104 ELSKQEAKISQILSNAVCKLAIGELM-------DVNLSKKFNPDKEAYLTMIYHKTAVLI 156
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA++A ++N +G+NLG+ FQ+ DD+LD D
Sbjct: 157 EASARCGALLAKLNEN---AFAEYGKNLGLAFQIVDDILDITGDEA 199
>gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
Length = 367
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 28/264 (10%)
Query: 1 MNGGLP-SKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLS---AIRYALLGGKKIRS 55
M+ G+ S+L + RI + L + + + L + A Y L GGK++R+
Sbjct: 1 MSQGIDYSELLNYAVRIVEDNLRAVFSRIREEASSISPLTLDAVEIASDYTLRGGKRLRA 60
Query: 56 FLVT---ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
FL + + + IE + Y L+HDD+ D +
Sbjct: 61 FLTLVGYWSKEWGSGDPSLITSLMTGIELLQSYLLVHDDVMDRDEIRRGGPTVHSWFRDK 120
Query: 113 EVTAIIAGNGLLTYAFEIIS----------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
+ G+ + I+ ++ N L T+ GL+ + G
Sbjct: 121 CIREFKTGDCTHYGDSQAITVGDFLEATAVEYVSRAGINGEVLSKLLGTYAAGLRKVAYG 180
Query: 163 QMLDIQDEFIDETQV-----FMIQK-MKTGALMCFACESGAIMAHA-SQNEKERLRCFGE 215
Q LD+ + +V ++ + + GAI + ++ L +
Sbjct: 181 QYLDVLFSYRSLHEVSERDVLLVHRLKTASYTIELPLHMGAIASGKYNERLLGELSSYAI 240
Query: 216 NLGIIFQLADDLLDCEED---LPK 236
GI FQL DD++ D K
Sbjct: 241 PAGIAFQLRDDIIGLYGDPRQTGK 264
>gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7]
Length = 345
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
++ + + + + ++++ RL SAI L GK +R LV A +
Sbjct: 26 RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 84
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +E +H +LIHDD+ +D RRG P+++ +D +++ G+ +L+ A
Sbjct: 85 TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 142
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I S L L+ Q + + ++ + + K KT L
Sbjct: 143 IRSIQTGDLRIVGIISNLGRDLSEGEIKQLETAEESILDENCY------LQVIKKKTATL 196
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ E GAI + AS R FGE LG FQ+ DD+ D ++ K
Sbjct: 197 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 246
>gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
35910]
Length = 325
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 10/229 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + ++E + I+ + + MQ++ L R+ + GK++R V CA
Sbjct: 1 MANIVEEIKRPINDEMKLFEQKFYESMQSKVA-LLDKVTRFIVTTKGKQMRPMFVFLCAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L R + IE IH +L+HDD+ +D + RR +++ + A++ G+ L
Sbjct: 60 LVGEVTEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + + + K + S+ + ++ LQ ++ +D + + I +
Sbjct: 118 LSKSVLLSTDHKDYDLLGVISRTIREMSEGELLQLEKARKLDITEDVYYE------IIRQ 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ CE G + +A + +++ FG G+ FQ+ DDL D
Sbjct: 172 KTATLIAACCEIGVLSNNADEALAKKMMDFGTFTGMAFQIKDDLFDYLS 220
>gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
Length = 365
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 65/250 (26%), Gaps = 24/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + L + + +L A R GGK++R +
Sbjct: 12 ADFRDSVSARVLSFLDDEKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAAD 71
Query: 68 NHLTA-------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + + +S LPS+ + E
Sbjct: 72 QPIEPTGLLQAAASLEFLHVSALVHDDLMDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQ 131
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
L S T + + + GQ+LD+ +
Sbjct: 132 FGCDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMA 191
Query: 175 TQV---------FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+++ + C+ G +A S ++ + FG +G FQ D
Sbjct: 192 GSDSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRD 251
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 252 DLLGVFGDAE 261
>gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
12755]
Length = 339
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L + + ++ L ++ + ++ + ++ ++ GGK +R +
Sbjct: 22 PALQADLSASLQLMEKSLK---------LKNKEVEQAILSMIHS--GGKLLRPAYQLLFS 70
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + V A ++ +D+ RR PT+ ++ A+ AG+
Sbjct: 71 -AYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDY 129
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F++++ + +K + + GQM D + +
Sbjct: 130 LFVCCFKLMADYASSMKSLQMNSRSMEKILAG-----ELGQMSKRYDLSVTVEDYLENIR 184
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT L +C GA + S + R GE +G+ FQ+ DD+LD +D L K
Sbjct: 185 GKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDVLDYSQDATALGK 241
>gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2]
Length = 336
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 22/233 (9%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + + + ++ L ++ QT T L GGK+ R L+
Sbjct: 14 DAQLAADISTQLEAVERRLYEVTEQTRKLPDTTSKHLLA-------AGGKRARPNLLLLT 66
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L N + A+E IH SL HDD+ MD+ +RRG P H + AI+ G+
Sbjct: 67 ARLGEANRDAIIDAAVAVELIHLASLYHDDV--MDDAPVRRGAPAAHEVWGNSVAILTGD 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + A + + + + ++ GQ+ + D +
Sbjct: 125 LLFSKASGVTA----------KLGPEAVRVQAETFERLVLGQLNEFAGPPEDADAIEHYI 174
Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ KTG+L+ + + G + + A Q+ E +R FGE +GI FQLADD++D
Sbjct: 175 QVLADKTGSLIATSAQFGVMFSQADQSLAEPVRIFGERVGIAFQLADDIIDLT 227
>gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia]
Length = 346
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 80/240 (33%), Gaps = 11/240 (4%)
Query: 3 GGLPSKLQ--ENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIR---YAL--LGGKKIR 54
L ++ ENSK D IL L Q+ L +I Y L GGK+ R
Sbjct: 2 AQLKRDVKKFENSKSFDKILPKKFELSDPQFSQSDDVKTLSQSISDPIYDLIDRGGKRWR 61
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
A LF H V A +E IH +L+ DD+ + + D
Sbjct: 62 PAFCFLIADLFKRAHEELYEVAALVELIHNATLVVDDIEDDSSVRRNDKCVHIKYGLDVA 121
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A ++S ++ + I G Q I
Sbjct: 122 VNA-ANYLYFAPLHYFLNSANYSNDQKMKMLEVSLSNMKIVHFGQAWDIFWHKQVCDIIP 180
Query: 175 TQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
T+ + KTGAL A + I+ + + L F +GI FQ+ DD+L+
Sbjct: 181 TEEQYLKMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFAVQIGIAFQIQDDILNLNG 240
>gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
Length = 330
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 12 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 229
>gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 331
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPITSDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
OCh 114]
gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
OCh 114]
Length = 294
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTA 72
RI+ + + + RL SA+ YA GG +IR ++T A +
Sbjct: 6 RIEAAIAQAVA--VGQGRGAVPQRLSSALGYATAPGGARIRPTILTSVALACGDDQPKLT 63
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+A+E IHC SL+HDDLP D+ RRGKP+VH Y E A++ G+ L+ AFEI++
Sbjct: 64 DAAASALELIHCASLVHDDLPCFDDADTRRGKPSVHKAYSEPLAVLTGDSLIVLAFEILA 123
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
D + +++ GM GG E E + + KTGAL A
Sbjct: 124 RQSGLAPDRVAQMILILSQR----TGMPGGICAGQGWESEAEIDLSAYHQAKTGALFIAA 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD--CEED-LPK 236
+ GA+ A E E G +G FQ+ADDL D + D L K
Sbjct: 180 TQMGAVAAG---QEAEPWFELGARIGEAFQVADDLRDALYDADTLGK 223
>gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
Length = 323
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M+ + + + +D + L + Y + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAEVDAKIQAQLNSEVVLINQLGF--------YIVSSGGKRLRPMLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A IE IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ +I S+ + LQ M +
Sbjct: 111 VGDYIYTRSFQMMTSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPNTTE------DSYM 164
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L + + AI+A A + + +G LG FQL DD+LD D K+
Sbjct: 165 QVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIAD-GKE 222
>gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu010]
gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu011]
gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu010]
gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu011]
gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
Length = 354
Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 25 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 84
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 85 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 143 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 200
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 201 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 254
>gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
Length = 323
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 18/224 (8%)
Query: 4 GLPSKLQ---ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
L S ++ ++ ++ + + L + + + GGK+IR +
Sbjct: 2 NLESIIKLTADDMAAVNETILNQLNSDVALINQLGYYIISG-------GGKRIRPMIAVL 54
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ ++V A IE IH +L+HDD+ +D +RRGK T + Y +++ G
Sbjct: 55 AGKALHCEKEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAMYGNAASVLVG 112
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T +F++++ + + S + +Q M E +
Sbjct: 113 DFIYTRSFQMMTDLDSMRVLKLMSDATNVIAEGEVMQLMNCNDPDTS------EDDYMRV 166
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
KT L A S AI++ A+ ++ LR +G LG FQL
Sbjct: 167 IYSKTARLFEVAAHSAAILSGATPEQEAALRDYGRYLGTAFQLI 210
>gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 350
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 78/243 (32%), Gaps = 16/243 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASL-FN 66
R+D +L + A + + + A+ GK++R+
Sbjct: 8 AAFKARVDEVLHRFVADEADLLAAVDPALAPVAERLEEAVAVGKRLRAAFCYWGWRATRQ 67
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV------HIQYDEVTAIIAG 120
+ LR A++E +H +++HDDL R V A +
Sbjct: 68 PDSDALLRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALGAAVRHHPRAADAARSL 127
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDE---FIDETQ 176
L+ ++ + L + + ++ G+ L+I
Sbjct: 128 AMLVGDLLMSLAGQLFATSGLPAAYLGRARPLWAALARDLIAGECLEILHTGGAPDTAAS 187
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ +I+ + G +A A + +E +G LG FQL DDLL D
Sbjct: 188 LKVIRYKTAKYTVEQPLLIGGALAGAGERLREGFSAYGLPLGEAFQLRDDLLGLFGDPHR 247
Query: 234 LPK 236
K
Sbjct: 248 TGK 250
>gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 331
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPITSDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
S4-120]
gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
S4-120]
Length = 288
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 71/189 (37%), Gaps = 7/189 (3%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK +R A + V A + +D+ +RRG PT+
Sbjct: 7 AGGKLLRPAFALLSAQA-GPDFDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTI 65
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H +Y A+ G+ L F+I+S+ + +++ + + + QM
Sbjct: 66 HSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTS 120
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + KT L +C SGA + AS+ + G LG+ FQ+ DD+
Sbjct: 121 YKMNVTVREYLTRISGKTAQLFALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQIIDDV 180
Query: 228 LDCEE-DLP 235
LD D
Sbjct: 181 LDYTSTDEG 189
>gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
Length = 402
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 84/231 (36%), Gaps = 24/231 (10%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECAS------------LFNVN 68
L + M +L SA Y LG GK+ R ++ +S +
Sbjct: 78 LGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAAAATSD 137
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + +D+ RRG +++ A++AG+ LL A
Sbjct: 138 EKNWRHHKLAEITEMIHVASLLHDDVLDHADTRRGIASLNFIMGNKLAVLAGDFLLARAA 197
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+S+ + + S+++ L +Q + + D + KT +L
Sbjct: 198 FSLSTLQNDEVVGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYY------LQKTFYKTASL 251
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +C+ AI+A + +G +LG+ +QL DDLLD L K
Sbjct: 252 IANSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTGTKASLGK 302
>gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
Length = 346
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK IR LV A + AL A+E H +SL+HDD+ MD RR +PT
Sbjct: 61 GGKAIRPALVLLAAEVVGGGAAAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LLT AF++++ + + + +Q +L GQ D+
Sbjct: 119 TVFGVSPAILAGDALLTLAFDVLA------AGGHPATPRAARIFSAAIQELLEGQHTDVA 172
Query: 169 DEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + + KTGAL+ AC GA+ S + E L FG +LG+ FQ D
Sbjct: 173 FERRQDVELAECLSMAAGKTGALLGCACALGALFGGGSLAQVEHLHAFGRDLGLAFQFVD 232
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 233 DLLGIWGDPE 242
>gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 331
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPITSDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 359
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 75/248 (30%), Gaps = 20/248 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSFLVTECASL 64
+L + + L L Q + + + L GGK++R
Sbjct: 6 ELADIPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWAGYLA 65
Query: 65 FN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAIIA 119
+ LR A++E I +LIHDD+ N V + E +
Sbjct: 66 AGRGEEDPAAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGD 125
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
T ++ +++ LS + G ++ + + +
Sbjct: 126 PEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRARSPWRGMRTEVIGGQLLDISLEA 185
Query: 180 I------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA +A AS+ R +G ++GI +QL DD
Sbjct: 186 AGSESVELANSVNRYKTAAYTIERPLHLGAAIAGASEELIAAFRGYGHDIGIAYQLRDDQ 245
Query: 228 LDCEEDLP 235
L D
Sbjct: 246 LGVFGDPA 253
>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
Length = 343
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
+++ D+ + + M Q + + A+RYA+L G K+ L L
Sbjct: 47 SLIADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 106
Query: 71 TALRVGAAIECIHCY--SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL AA+E +H L+HDDLP D RRG+P+ H Y A++AG+ L A+
Sbjct: 107 AALPAAAALEMLHAASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAY 166
Query: 129 EIISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMK 184
+ S + +++ L +G GM GQ + E +V + K
Sbjct: 167 THVISHTPSPDPVPHAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKK 226
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
G + + GA++ A +E+ LR +G +G++++L DD+
Sbjct: 227 FGEMAECSAACGAMLGGAGPDEEAELRRYGRTIGVLYELVDDI 269
>gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503]
gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
Length = 350
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 21 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+ TV + AI+ G+
Sbjct: 81 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRSTVWSVWGVGGAILLGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 139 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 197 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250
>gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination
protein C3) [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 326
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 84/229 (36%), Gaps = 8/229 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
L L + KRID ++L + + +I + GGK++R +V +
Sbjct: 3 LNEALHIDPKRID---REILSLVKHDPDIPSDSVIGKSIAELVESGGKRLRPMMVIVGSR 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + A ++ +D RR +P +H + TA+ N +
Sbjct: 60 -FGPRPSPRKTLQLAAIAEFIHAASLIHDDIIDRSDTRRNRPALHTKVGIQTAVHTANYM 118
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ E++S + ++ ++ T + D +
Sbjct: 119 MARVVELLSQYSKEHDRYVQDFSAITTTQLCIGEYQQLNHRFDFDVTEEVYLEKTG---N 175
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT LM + GA + AS ++L FGE L + FQ+ DDLLD +
Sbjct: 176 KTAQLMATCLKVGAKSSDASDAVADKLYQFGECLVMSFQIRDDLLDFTQ 224
>gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
Length = 331
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE++ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDESRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA+++ A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLSGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 230
>gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
Length = 283
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDL 92
+L +A+ YA+ GG +IR ++T A + E IHC SL+HDDL
Sbjct: 13 APAKLAAALEYAVTPGGARIRPTILTSVAMACGDDRPELTNAAGVALEVIHCASLVHDDL 72
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
P D+ +RRGKP VH Y E A++AG+ L+ F+I++ + + D + + +
Sbjct: 73 PCFDDADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPD----RALRLIDI 128
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GM G E D+ + + KTGAL A + GA+ A E E
Sbjct: 129 LGTRTGMPFGICAGQGWESEDQIDLSAYHQAKTGALFIAATQMGAVAAG---QEAEPWEE 185
Query: 213 FGENLGIIFQLADDLLDCEED---LPK 236
G +G FQ+ADDL D D L K
Sbjct: 186 LGARIGEAFQVADDLRDALCDEQTLGK 212
>gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 349
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 19 ILDDLLLQTASHMQ---TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
L + L H+ ++L +A R+ + GGK+IR + + A+
Sbjct: 34 ALPETLAALEEHLTRATEDAEEKLRAAARHLVSAGGKRIRPMVTLLSCGACGGDMRAAVP 93
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+
Sbjct: 94 YAVSAELTHSATLLHDDV--IDDGPLRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAE 151
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + + + + + KT +L +A
Sbjct: 152 PARSAALPPLLATMRRLVEGEVLQLSLRSSFSATE-----KDYLDVVIGKTASLFGWAAA 206
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+GA A E L FGE +GI FQL DD LD D L K+
Sbjct: 207 AGAWAAGQVGRIPEALVQFGEGIGIAFQLVDDALDYAADPQLLGKR 252
>gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
Length = 329
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 11/223 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+LD + +H L +R Y GGK IR+ L+ A V T
Sbjct: 4 DLLDRVHTLLPAHHARPEIQLLYDMMRDYPARGGKGIRAELLLASARAHGVREGTPAWEQ 63
Query: 77 AAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A + D+ RRG+P +H + A+ AG+ L Y + ++
Sbjct: 64 ALWLAATVELFQNWVLIHDDIEDDSEERRGQPALHRTHGVPLALNAGDALHAYMWAAVAR 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFA 192
Q++ + ++ + + + +
Sbjct: 124 ANVPGAFEEVLQMIHRTAEGQHV----DLAWVEHGRWDLTPADYLDMVRLKTAYYTVVVP 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA+ A A+ + G LG FQ+ DD+L+ D
Sbjct: 180 LRLGALAAGATPS--AAFEAAGVALGAAFQIRDDVLNLTADAG 220
>gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
Length = 326
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 88/239 (36%), Gaps = 17/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + + + + D + + + Y + GK++R V
Sbjct: 3 ITEQIKLPIASEMELFEEKFRDSMSSKVALLNRIT--------HYIVNRKGKQMRPMFVF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A ++ +D+ RRG +++ + A++
Sbjct: 55 LTAKMVSGGSIDERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + I S + ++ LQ ++ +D + +
Sbjct: 115 GDFLLSKGLLLSIDNNDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYE------ 168
Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA +A + E++R FGE +G+ FQ+ DDL D +D K
Sbjct: 169 IIRQKTATLIAACCSLGACSVAPDDKAVVEKMRKFGELIGMAFQIKDDLFDYTDDAIGK 227
>gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu005]
gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu006]
gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu005]
gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
SUMu006]
gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
Length = 354
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 25 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 84
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 85 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 143 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 200
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL C GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 201 AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 254
>gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides]
Length = 288
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHD 90
++ +L +A+ YA+ GG +IR L+ A+ + + A+E IHC SL+HD
Sbjct: 21 SEAPSKLATALDYAVTPGGARIRPTLLLSVATRCGDSRPALSDAAAVALELIHCASLVHD 80
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
DLP D+ IRRGKPTVH Y E AI+ G+ L+ FE+++ +
Sbjct: 81 DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAADRPQRALQLVTALA 140
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ GQ + + + + KTGAL A + GAI A E E
Sbjct: 141 VRTGMPMGICAGQGWESESQINLSA----YHRAKTGALFIAATQMGAIAAGY---EAEPW 193
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 194 EELGARIGEAFQVADDLRDALCDAE 218
>gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
17-4]
gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
17-4]
Length = 326
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 17/230 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S+L + + ID+ + L+ + GGK +R +
Sbjct: 11 PELQSELIQTIELIDSRIH--------LRNKSIEHALVDMMN---TGGKLVRPAYTLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A + +D+ RRG+ T+ +Y + A+ AG+
Sbjct: 60 -TFGEDQDPNRARAFAAAIEVLHMATLIHDDVIDDSPKRRGQQTIQSKYGKDIAVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T +F++I+ +K + + + M I
Sbjct: 119 LFTVSFKLITDYSNSMKQMQINTKGMEKILMGEIDQMHLRYNQKITIRNYLTQ-----IS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L +C SGA+ + ++ G ++G+ FQ+ DD+LD +
Sbjct: 174 GKTAQLFALSCYSGALESGQTERFARNCYYIGSHIGMAFQIKDDILDYTQ 223
>gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
Length = 324
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
I L+D S + + + GK +R LV A LF
Sbjct: 7 IKSPISEELEDFKKLFESTLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLFGKVCPA 66
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L A+E +H SL+HDD+ +D RRG+ +V+ ++ A++AG+ LL A +
Sbjct: 67 TLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLAGDYLLATALVQV 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ +I S L L LQ ++ + E F + + KT L
Sbjct: 125 GMTRNHDIIDIVSCLGQDLADGELLQL------SNVSNLHFSEEVYFDVIRKKTAVLFAA 178
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
++GA+ AS + E R FGE +G+ FQ+ DD+ D E ++ K
Sbjct: 179 CTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIFDYSESKEIGK 225
>gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
Length = 325
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 17/229 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + K + D S++ L Y + GK++R V A
Sbjct: 8 IKAPIANEMKLFE---DKFFESMKSNV-----SLLDRITYYIVRRKGKQMRPMFVFLIAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + R + IE IH +L+HDD+ +D+ ++RRG +++ + A++ G+
Sbjct: 60 MLGEVNEKTYRAASFIELIHTATLVHDDV--VDDSHMRRGFFSLNALWKNKIAVLVGDYF 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ I + K S + ++ LQ ++ ++ + + I +M
Sbjct: 118 LSKTLIISTQNKDFDLLETVSVAIKEISEGELLQIEKARKLDITEEVYFE------IIRM 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ C++GA+ + ERL FGE +GI FQ+ DDL D +
Sbjct: 172 KTATLIAACCKAGALSVSSDNMVAERLHKFGELVGIAFQIKDDLFDYTQ 220
>gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
Length = 324
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
I L+D S + + + GK +R LV A LF
Sbjct: 7 IKSPISEELEDFKKLFESTLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLFGKVCPA 66
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L A+E +H SL+HDD+ +D RRG+ +V+ ++ A++AG+ LL A +
Sbjct: 67 TLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLAGDYLLATALVQV 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ +I S L L LQ ++ + E F + + KT L
Sbjct: 125 GMTRNHDIIDIVSCLGQDLADGELLQL------SNVSNLHFSEEVYFDVIRKKTAVLFAA 178
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
++GA+ AS + E R FGE +G+ FQ+ DD+ D E ++ K
Sbjct: 179 CTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIFDYSESKEIGK 225
>gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 353
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 80/249 (32%), Gaps = 25/249 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVT---ECASLFN 66
K ++ L + + + D + A Y L GGK++R+FL +
Sbjct: 1 MKLVEDNLKTVFSKLREEASSVSPLTYDIIEIASDYTLRGGKRLRAFLALVGYWSREWGS 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMD---------NGYIRRGKPTVHIQYDEVTAI 117
+ T V + IE + Y LIHDD+ D + + R
Sbjct: 61 GDLATITNVMSGIELLQSYLLIHDDVMDRDELRRGGPTVHAWFRDKCLKEMKGDCVHYGD 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----LDIQDEFI 172
+ Y ++ + L T++ GL+ + GQ + +
Sbjct: 121 SQAITVGDYLEATAVEYISRANLPGETLRRLLETYSRGLRMVAYGQYLDVLLSNKPLGNV 180
Query: 173 DETQVFMIQK-MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230
E V ++ + G I + S+ L + GI FQL DD++
Sbjct: 181 SERDVLLVHTLKTASYTIELPLHLGVIASGKYSEKILRELTSYAIPAGIAFQLRDDIIGL 240
Query: 231 EED---LPK 236
D K
Sbjct: 241 YGDPRQTGK 249
>gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 269
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
L A YALL GGK+ R LV A + + +E H SLI DDLP MDN
Sbjct: 7 LRDACEYALLNGGKRFRPALVLMIAKALGFQ-VDVSQAALCVEYFHTASLIADDLPCMDN 65
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----------SPKTQLKDNIRSQLM 147
RR PT+H + E T+++A L+ + ++ P K+ + +
Sbjct: 66 DDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERLCVLAL 125
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ T N G+ G GGQ LD+ + + + + KT L + G I +
Sbjct: 126 ENATQNTGILGATGGQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGGGVLEKL 185
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + G+ FQ+ADDL D ++D
Sbjct: 186 SLVKKCAGHFGMAFQIADDLGDMKQDS 212
>gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
Length = 351
Score = 84.9 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 13/238 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFN-V 67
R+D +L ++ + A + + + + A+ GK++R+
Sbjct: 10 AFKSRVDDVLRAVVAREADELAAIDPALEPVAGQLEAAVADGKRLRAAFCYWGWRAAGQP 69
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------IQYDEVTAIIAG 120
+ +R A++E +H +++HDDL R V A
Sbjct: 70 DSDALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHVALRGAVHGRPRAVSAARSLA 129
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
+ + ++ + ++ G+ L+I
Sbjct: 130 MLVGDLLMSLAGQMFATSGLPAAYLARARPLWSVLARELIAGECLEILRTGTVPDTATSL 189
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I+ + G +A A + +E +G LG FQL DDLL D
Sbjct: 190 KVIRYKTAKYTVEQPLLIGGTLAGAGERLREGYSAYGLPLGEAFQLRDDLLGLFGDPE 247
>gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 328
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 24/233 (10%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTA------ 72
L+ M +L SA Y +G GK++R ++ A+ NV+
Sbjct: 86 SLVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIPEQIVGDTL 145
Query: 73 ------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ A + +D+ RR +++ A++AG+ LL+
Sbjct: 146 AAELRTRQQCIAEITEMIHVASLLHDDVLDDAETRRSISSLNFVMGNKVAVLAGDFLLSR 205
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A ++S K ++ + + L +Q + + ++ +T KT
Sbjct: 206 ACVAVASLKNTEVVSLLAIAVEHLVTGETMQMTCTSEQRCSMEYYMKKT------YYKTA 259
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+L+ +C++ A++A + +G+NLG+ FQL DD+LD L K
Sbjct: 260 SLISNSCKAIALLAGQTTEVATLAFEYGKNLGLAFQLIDDVLDFTGTFASLGK 312
>gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1]
gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5]
gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
Length = 326
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 80/238 (33%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFT 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L QM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ DD+LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230
>gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 325
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 74/220 (33%), Gaps = 13/220 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L L NDR+ + GGK +R + F +H TA
Sbjct: 17 AALKPYLATNVKIDNAAINDRVHDLL---AAGGKFLRPGFFYLFSQ-FGPDHNTARLRAG 72
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN--GLLTYAFEIISSPK 135
A + +D RR T+H Y + AI AG+ + +I++
Sbjct: 73 AAAMELLHVATLIHDDVIDESPERRHVTTIHQDYGQRNAIYAGDLLFTCYFDQVLIAAKT 132
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + L QM D I + KT L +CE
Sbjct: 133 ADDVKINTAAMRAILQGE-------LDQMAHNFDPTTTVDDYLAIARGKTARLFSLSCEQ 185
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA A A + + + GE +G+ +Q+ DD+LD D
Sbjct: 186 GAHFAGADASVVKLAQQIGERMGLAYQMLDDVLDYAGDEA 225
>gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
Length = 324
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KLQ+ ID ++ + N L + Y GK +R L A LF
Sbjct: 3 KLQQIKLPIDKEFEEF-RRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + L ++E +H SL+HDD+ +D RRG+ +V+ Y+ +++ G+ +L
Sbjct: 62 EINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLAT 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + + + ++ + L +L+ +Q +I E + + + KT
Sbjct: 120 SLKHSAMTREITIVDLVACLGQNLSEGEIIQL------ANINASEFSEEVYYDVIRKKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
AL + E+GAI HAS + R FGE +GI FQ+ DD+ D ++ K
Sbjct: 174 ALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIKDDIFDYYSSDEIGK 225
>gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
Length = 324
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 10/189 (5%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R LV A L+ L A+E +H SL+HDD+ +
Sbjct: 45 GKMMRPMLVLLAAKLYGEVCPATLHAAVALELLHNASLVHDDVVDESTERRGQLSVNAIF 104
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ ++ + L+ + L + Q +
Sbjct: 105 NNKVAVLSGDYLLATSLVQVGLTRNHAIIDIVSCLGQDLAEGELLQLSNVSNLQFSEDVY 164
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + KT L ++GA+ A + E R FGE +G+ FQ+ DD+ D
Sbjct: 165 FD--------VIRKKTAVLFAACTKAGALSVGADDEKVEFARLFGEYIGLCFQIKDDIFD 216
Query: 230 CEE--DLPK 236
E ++ K
Sbjct: 217 YFESKEIGK 225
>gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
Length = 323
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 19/240 (7%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 1 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 54 LAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 112 GDFLYTRSFQMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTE------ESYMR 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A A++A AS ++ L +G+ LG FQL DDLLD D L K
Sbjct: 166 VIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGK 225
>gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
Length = 311
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
+ + A+ ++ + L + Y L GK++R ++ A ++ AIE
Sbjct: 11 INKELAALVRDLPDSPLGEILSYVLSAPGKRVRPLILILSAEALGTPPAQSISAALAIEL 70
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+H SL+HDD+ +D+G RRG P+ ++ +++AG+ L++ + ++IS
Sbjct: 71 VHAASLVHDDI--LDHGIERRGSPSALERFGPEASLLAGDWLISRSIDLISGYS------ 122
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + M G+++D+ E I + L + + G +++
Sbjct: 123 ----QPVIRAFSRACMDMSEGELMDLSCAGSPEDYYQCITRKTAS-LFSASAKIGGLISG 177
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
A + + RL +G +LG+ +Q+ DDL + D K
Sbjct: 178 AGEEDVARLESYGLHLGLGYQVLDDLEEFLGLDQGK 213
>gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
Length = 328
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L E+ + ++ L ++ + ++ + A+ ++ GGK +R +
Sbjct: 11 PALQNDLSESLQLMEQSLK---------LKNKAVEQAILAMIHS--GGKMLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + V + ++ +D RR PT+ Q+ A+ AG+
Sbjct: 60 E-FGEEKDSQKAVALSAAIEMLHTASLIHDDIVDQADTRRSLPTIRAQFGNDVAVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F++++ LK + + + GQM D +
Sbjct: 119 LFVCCFKLLADYAGSLKSLQINSRSME-----TILAGELGQMSKRYDLNVTIEDYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
KT L +C GA + AS + + G+++G+ FQ+ DD+LD E L K
Sbjct: 174 GKTAELFALSCFIGAYESGASLRLANQAKTIGQSIGLAFQIMDDILDYSQSESALGK 230
>gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14]
gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14]
Length = 383
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 1/186 (0%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR LV A A V AA ++ MD RR +PTV
Sbjct: 97 GKAIRPALVLAAAHAIGGARGRAAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTVWT 156
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + AI+AG+ L A +++ ++L + Q
Sbjct: 157 VFGDADAILAGDALQALALRLLAEDPHPAAPAAAARLAACVVELCAGQHADTALESRAPT 216
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E +V + + KTGAL+ AC G + A A++ E L FG G+ FQL DD++
Sbjct: 217 EVTL-AEVLAMAEAKTGALLGCACAVGGLYAGAAEEEVRALDAFGRQAGLAFQLIDDVIG 275
Query: 230 CEEDLP 235
D
Sbjct: 276 IWGDPE 281
>gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
ATCC 49725]
gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
ATCC 49725]
Length = 359
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 78/249 (31%), Gaps = 22/249 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECAS 63
+L + + L L Q H+ + +A+ + L GGK++R
Sbjct: 6 ELADIPGAVREKLAIFLDQRRDHVAEIGAP-VSTAMSFLESFVLDGGKRVRPMYAWAGYL 64
Query: 64 LFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAII 118
+ LR +++E I +LIHDD+ N + + E +
Sbjct: 65 AAGRGSESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRESDFLG 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
T ++ +++ LS + G ++ + + +
Sbjct: 125 DPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRARDPWRGMRTEVLGGQLLDISLE 184
Query: 179 MI------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + GA +A AS R +G ++GI +QL DD
Sbjct: 185 AAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGASDQLISAFRGYGHDIGIAYQLRDD 244
Query: 227 LLDCEEDLP 235
L D
Sbjct: 245 QLGVFGDPE 253
>gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group]
Length = 463
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 89/250 (35%), Gaps = 29/250 (11%)
Query: 10 QENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTECASL 64
+E + + D+L L M +L SA Y GK+ R ++ AS
Sbjct: 120 EEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASA 179
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHI 109
+ VG + +D+ RRG +++
Sbjct: 180 LKFPLSDSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNC 239
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+++AG+ LL+ A +++ ++ + + L +Q ++
Sbjct: 240 IMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQI------STSRE 293
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KT +L+ +C++ AI+A + + +G NLG+ FQL DD+LD
Sbjct: 294 QRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 353
Query: 230 CEE---DLPK 236
L K
Sbjct: 354 FTGTSASLGK 363
>gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 334
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 11/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L +++ + D +L +++ + L S + GGK++R +V +
Sbjct: 2 NLHNRIGVDLASFDRLLREVVSSDRDLPPSSV--VLSSVMDLINAGGKRLRPLMVVLGSR 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + + A+ + + +D +RRG PT+H D TA+ GN +
Sbjct: 60 -FGESGHEPAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYM 118
Query: 124 LTYAFEIISSPK--------TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ A E + + ++ +L L Q+ D +
Sbjct: 119 IARAIEWAAGHPGGDPDGNSEDVSEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTME 178
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
Q + KT LM ++GA AHA ERL FGE+LG+ FQ+ DDLLD
Sbjct: 179 QYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFT 234
>gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH]
gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU]
gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH]
gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU]
gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
Length = 332
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 14 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 125 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 231
>gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
Length = 327
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 90/240 (37%), Gaps = 17/240 (7%)
Query: 1 MNGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
MN + + K ++ + + + + + + LL+ GGK +R L+
Sbjct: 1 MNNNWQTYPLISTQLKAVNQCIQERIDCQNAEL----HTALLTMAN---NGGKYLRPALL 53
Query: 59 TECASLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ +F + R+ I + +D+ RRG ++ ++ + TA+
Sbjct: 54 LLTSQIFTPSSRNDERLIKLAASIEVLHMATLIHDDIIDDSPERRGAVSIQARFGKDTAV 113
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ L T F+++ + + + GQM +
Sbjct: 114 YAGDLLFTVFFDLLLEAIPASPYLQVNARAMRQILDG-----ELGQMDQRFNLQQTLDDY 168
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT AL A + GA A A+ + FG+ LGI FQ+ DD+LD KK
Sbjct: 169 LANVRGKTAALFKLAAQEGAYFAAATTEQVASAAAFGQQLGIAFQMLDDILDYTG--GKK 226
>gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
Length = 343
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 18/230 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ ++ I+ + + + + + L+SA GGK++R L A + +
Sbjct: 31 ADDMAAVNAIITERMQSDVAVIPA-LAEHLVSA------GGKRLRPLLCVAAARVAGTTN 83
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L ++ AA+E IH +L+HDD+ +D+ +RRGK H+ + ++++ G+ L AFE
Sbjct: 84 LHHRKLSAAVEFIHTATLLHDDV--VDSSQLRRGKVAAHLIWGAPSSVLVGDFLFARAFE 141
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + I S+ + LQ M D + E I KT L
Sbjct: 142 LMVETDSLQALGILSKASGVIAEGEVLQLM------KAYDVNLTEATYIDIIAAKTAVLF 195
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
A ESGA+ A AS ++ LR +G NLG+ FQ+ DD LD + L K
Sbjct: 196 AAAAESGAVAAGASSAGQQALRDYGLNLGLAFQIQDDALDYGGTTQSLGK 245
>gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 424
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 29/254 (11%)
Query: 6 PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
S+ +E + + D+L L M +L SA Y GK+ R ++
Sbjct: 77 SSRAEEQQDPFELVADELSILGNRLRSMVAAEVPKLESAAEYFFKVGAEGKRFRPTVLLL 136
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHD---------------DLPSMDNGYIRRGKP 105
AS + +G +D+ RRG
Sbjct: 137 MASALKFPIPESTDIGVFSILASKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVT 196
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+++ +++AG+ LL+ A +++ ++ + + L +Q
Sbjct: 197 SLNCIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVGHLVTGETMQM------S 250
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+++ KT +L+ +C++ AI+A + +G NLG+ FQL D
Sbjct: 251 TSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQLID 310
Query: 226 DLLDCEE---DLPK 236
D+LD L K
Sbjct: 311 DVLDFTGTSASLGK 324
>gi|297562051|ref|YP_003681025.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846499|gb|ADH68519.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 360
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 57/242 (23%), Gaps = 21/242 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV------ 67
+D L + + + + A+ + GGK++R
Sbjct: 19 VDRELTSFCAGHRAQLLEIGEELAPAMDALEAMISGGKRLRPTFCYWGWRGAGGAAEDER 78
Query: 68 ------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + S LP+ + E A
Sbjct: 79 VVRAAASLEFLQACALVHDDVIDNSDTRRGLPATHKRLAKLHADQGWSGDSEGFGQGAAI 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + ++ GQ LD ++
Sbjct: 139 LIGDLCLAWSDEMYQASGFPTEVLGRGRPPFDAMRTEVMAGQYLDTLEQVRGTGTREAAL 198
Query: 182 KMKTG----ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
++ + GA +A +G LGI FQL DD+L D
Sbjct: 199 RVMRYKSAKYTVERPLHLGAALAGRHGELAGVYTDYGIPLGIAFQLRDDVLGVFGDPSTT 258
Query: 235 PK 236
K
Sbjct: 259 GK 260
>gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
DelRiverFos13D03]
Length = 293
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 19/234 (8%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ +L + R+ A M +L A+ YA+ GG +IR ++ A
Sbjct: 2 SITDRLDAATARV----------LARAMGGDAPAQLAQALHYAVTPGGARIRPTILLSVA 51
Query: 63 SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+E IHC SL+HDDLP D+ RRGK TVH + E A++ G+
Sbjct: 52 MACGDDRPALSDAGAVALEMIHCASLVHDDLPCFDDADTRRGKATVHKAFSEPLAVLTGD 111
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L+ AF+I++ + + G+ GQ + + E
Sbjct: 112 SLIVLAFDILAEAAGDDAKRALQMIRVLSRRTGMPDGICAGQGWESEAEVNLSA----YH 167
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL A + GA+ A E G +G FQ+ADDL D D
Sbjct: 168 RAKTGALFIAATQMGALAAGQD---CEPWEELGARIGEAFQVADDLRDALYDAE 218
>gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis C231]
Length = 372
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 78/250 (31%), Gaps = 24/250 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECASL 64
E ++ L A + + + + Y L GGK+IR
Sbjct: 17 FSEIEPAVEHKLRAFFQGRARKISVIG-EPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLA 75
Query: 65 FNVNHLTALRVGAAIECIHCY---SLIHDDLPSMDNGYIRRGKPTVH-----IQYDEVTA 116
N T + +D RRG+PTVH D
Sbjct: 76 GNGLEGTEDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACHRDNSWN 135
Query: 117 IIAGNGLLTYAFEI--ISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + + A + ++ + + S ++GGQ+LD+
Sbjct: 136 GDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIARTSNAWRGMRTEVIGGQLLDVFL 195
Query: 170 EFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + + + + GA +A A + LR +G ++G+ +QL D
Sbjct: 196 ESAGSESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGVAYQLRD 255
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 256 DLLGVFGDPA 265
>gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis FRC41]
gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis 1002]
gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
pseudotuberculosis I19]
Length = 393
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 78/250 (31%), Gaps = 24/250 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECASL 64
E ++ L A + + + + Y L GGK+IR
Sbjct: 38 FSEIEPAVEHKLRAFFQGRARKISVIG-EPVSRVVTYLEDFVLGGGKRIRPSYAWAGFLA 96
Query: 65 FNVNHLTALRVGAAIECIHCY---SLIHDDLPSMDNGYIRRGKPTVH-----IQYDEVTA 116
N T + +D RRG+PTVH D
Sbjct: 97 GNGLEGTEDPEAVLASISSLELIQACALIHDDIIDASDSRRGQPTVHRSAEACHRDNSWN 156
Query: 117 IIAGNGLLTYAFEI--ISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ + + A + ++ + + S ++GGQ+LD+
Sbjct: 157 GDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIARTSNAWRGMRTEVIGGQLLDVFL 216
Query: 170 EFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + + + + GA +A A + LR +G ++G+ +QL D
Sbjct: 217 ESAGSESIELAENVNRFKTAAYTIERPLHIGAAIAGADERIVHALRDYGRDIGVAYQLRD 276
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 277 DLLGVFGDPA 286
>gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
Length = 331
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A A+ ++ L +G+ LG FQL DDLLD D
Sbjct: 174 VIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSE 229
>gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4]
gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
Length = 330
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 12 AHLLTPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 65 GALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 123 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 229
>gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 338
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 5/185 (2%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK +R + + + A+E +H +SL+HDD+ MDN +RR +P
Sbjct: 52 SGGKALRPAMALLSGRAAGADMARVVPAAVAVEFVHAFSLLHDDV--MDNDRMRRHRPAA 109
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ AI+AG+ LL A E++ T + + I Q + G
Sbjct: 110 WTVFGVPAAILAGDALLALAEEVLLDRGTTGAHRAARHIAATTRKLIAGQALDLGFETRT 169
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ++ KT AL +C GA++A A L FGE+LG+ FQL DDL
Sbjct: 170 DVSL---DECTVMSMDKTAALFACSCSIGAVLAEAPNRLALALSGFGEDLGLAFQLVDDL 226
Query: 228 LDCEE 232
L
Sbjct: 227 LGIWG 231
>gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2
[Paenibacillus sp. HGF5]
gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2
[Paenibacillus sp. HGF5]
Length = 334
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 11/236 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L +++ + D +L +++ + L S + GGK++R +V +
Sbjct: 2 NLHNRIGVDLASFDRLLREVVSSDRDLPPSSV--VLSSVMDLINAGGKRLRPLMVVLGSR 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F + + A+ + + +D +RRG PT+H D TA+ GN +
Sbjct: 60 -FGESGHEPAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYM 118
Query: 124 LTYAFEIISSPK--------TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ A E + + ++ +L L Q+ D +
Sbjct: 119 IARAIEWAAGHPGGDPDGNSEDISEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTME 178
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
Q + KT LM ++GA AHA ERL FGE+LG+ FQ+ DDLLD
Sbjct: 179 QYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFT 234
>gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium
violaceum ATCC 12472]
gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium
violaceum ATCC 12472]
Length = 338
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 9/223 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++T L L + + +Q + L Y GK +R FLV F + V
Sbjct: 14 LETALGARLSE--AMLQAVKDAWLDPYRSYHNRMGKMLRPFLVCSVMQAFERDPRRTPVV 71
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E IH SL+ DD+ +RRG PT H Q A AG+ L F+++++
Sbjct: 72 VAIAEIIHAASLVLDDVADDSP--LRRGGPTAHRQVGVRVAGAAGSAWLNACFQLLAADD 129
Query: 136 TQLKDNIRSQLMLSLTHNIGLQ----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ L+ +L + + + + + + + T
Sbjct: 130 SGLEPEQAQRLADEIAWEHWVTGVGTTIDTTWPWMGRLDGTPAQYLQSVVHRSTSYTYRL 189
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-ED 233
+ GAI A AS + + GE LGI FQ+ DD+L+ + D
Sbjct: 190 PLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDILNVQPGD 232
>gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3]
gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3]
Length = 331
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A A+ ++ L +G+ LG FQL DDLLD D
Sbjct: 174 VIYCKTAKLFEAATLLAAVLAGATPEQEAALGDYGKYLGTAFQLTDDLLDYTADSE 229
>gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
Length = 391
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 57/236 (24%), Gaps = 16/236 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--- 72
++ +L+ L + + D GGK++R+
Sbjct: 43 LEEVLEAGLRRARAVDPLFARDLADRVGALVSRGGKRLRAAFAFCGWRAAGGTGDATAVL 102
Query: 73 ---------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + SL P++ R E +
Sbjct: 103 RTGAALELLQACALVHDDVMDGSLRRRGGPALHVELARGHWAAGMHGSAEAFGTSSAVLA 162
Query: 124 LT----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+A ++++ R + G + + +
Sbjct: 163 GDLALAWADDLLTETALGTPHGGRLHEEWRAMRTEMVAGQYRDLHAQAARSSGVDEALDI 222
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G +A A + LR G G+ FQL DDLL D
Sbjct: 223 ATLKSALYTVARPLALGGSLAGAGDRTLDALRAAGRCAGLAFQLRDDLLGAFGDPA 278
>gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 366
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 78/231 (33%), Gaps = 18/231 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + + ++T L +LL + + GGK+ R A
Sbjct: 49 ALVADGLVEVETRLGELLHSRLAIIPKVGG-------HLTFAGGKRFRPMATLLAAQAAG 101
Query: 67 V--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A ++ +D G RRG+P + Y +++ G+
Sbjct: 102 YTCDEAWNDTLTIAAAGELLHTATLLHDDVIDEGEFRRGRPAARLPYGNGLSVLTGDYCF 161
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + +S + + + + Q G+ + ++ + K
Sbjct: 162 ARALQSVSRLGKAAATSSMADAVTLMAEGEIAQLYAAGEWEVDL------ERYTLVIERK 215
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T AL+ + ++ + L +G +G FQ+ADD++D D+
Sbjct: 216 TAALIAWCTAVAHLV---EPDAAAALARYGREVGFAFQIADDIIDYTLDVE 263
>gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 323
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 19/239 (7%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
M+ + + + ++D + L + + Y + GGK++R L
Sbjct: 1 MDFKAIQALTANDMAQVDAKIQAQLNSDVALINQLGF--------YIVSSGGKRLRPMLA 52
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A +E IH +L+HDD+ +D +RRGK T + + +++
Sbjct: 53 VLAARALGYDGEKHTTAAAFVEFIHTATLLHDDV--VDESDMRRGKETANAAFGNAASVL 110
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T +F++++S ++ +I S+ + LQ M +D ++
Sbjct: 111 VGDYIYTRSFQMMTSLRSLKILDIMSEATNVIAEGEVLQLMNCNDPDTTEDSYMQ----- 165
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ KT L + + AI+A A + + +G LG FQL DD+LD D K+
Sbjct: 166 -VIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVLDYIAD-GKE 222
>gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
Length = 332
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 14/236 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTEC 61
L +L + ++ L L+ + D L+ A R+ LG K+ R L
Sbjct: 2 DLARELTDFLGAVEQRLGSTLVDGDAG-PDVKGDTLMEAARHLCLGSGSKRARPMLARLF 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
V + V A E IH SL+HDD+ +D G RRG+PTV+ ++ + A+++G+
Sbjct: 61 GGAVGVPAERLVDVAVAAELIHSASLLHDDV--VDAGMFRRGRPTVNARWGNIVAVMSGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ +S +L + S + + ++ D + ++ I
Sbjct: 119 LILSTGLFQLSQLDARLTRSALSVVSE-------MTRAAIAEVEARGDLDLPLNRLRFIA 171
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
+ KTG+L + + A +A ER FG +LG+ FQ+ADD+ D D+ K
Sbjct: 172 EGKTGSLFGWCGNAAATLAEH-PEAVERFDGFGRHLGVAFQIADDIRDILGTDVGK 226
>gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior]
Length = 337
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 12/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLV 58
M G LP + ++ L D+ + + + + + L Y G GK +R
Sbjct: 5 MPGSLPDYQIDPYTLVEDDLKDIFVDIRTRLIKNTSLEELQPISTYYFDGQGKAVRPMFT 64
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHD----DLPSMDNGYIRRGKPTVHIQYDEV 114
A N + + + + +IH+ +D RRGKP+V++ + +
Sbjct: 65 ILMARAINYHKGRNDLLYSQRQIAMISEMIHNASLLHDDVIDQSDFRRGKPSVNVLWSQK 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+AGN +L+ A ++S + SQL+ L +Q + E
Sbjct: 125 KVAMAGNYILSIACMMLSEIHSDDVTISISQLISDLVQGEFMQL------GSKETENERF 178
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L+ + AI+++ + E +G N+G+ FQL DDLLD
Sbjct: 179 AHYLTKTYRKTASLIANCMKGVAILSNVDERTIEMAFQYGRNVGLAFQLVDDLLDF 234
>gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 365
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 26/241 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ +L D L + + + L+ A GGK++R LV
Sbjct: 44 DPDFGPAISIGMAKVEKLLRDALANSDPLIDA-SSRHLVEA------GGKRVRPLLVLLT 96
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ L + ++ A +E H +L HDD+ MD+ +RRG PT H + AI+AG+
Sbjct: 97 SLLGEGVNDDVIKAAAVVELTHLATLYHDDV--MDSAPMRRGAPTAHEVWGNSVAILAGD 154
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
+ A + + + + GQ+ + ++
Sbjct: 155 LIFARAS----------VFGSELGPEAVMWQSRTFERLCLGQLHESIGPREGDDVIEHHI 204
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
+ KT +L+ + GA AS + LR +GE +G+ FQ+ADD++D E D
Sbjct: 205 QVISDKTASLLSTSGAFGARFGGAS-EFIDVLREYGEKVGVAFQVADDVIDLASKEADSG 263
Query: 236 K 236
K
Sbjct: 264 K 264
>gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
Length = 260
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 43 IRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
+ YA GG +IR ++ A + + +A+E IHC SL+HDDLP D+ I
Sbjct: 1 MDYATAPGGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADI 60
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKP+VH + E A++AG+ L+ AFE+++ ++ +T GM
Sbjct: 61 RRGKPSVHRAFSEPLAVLAGDSLIVLAFEVLARQ----AITDPARAARLMTSLAERTGMP 116
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GG E E + + KTGAL A E GAI A + R G +G
Sbjct: 117 GGICAGQGWESEPEVDLAAYHRSKTGALFIAATEMGAIAAGHDP---DNWRDLGALIGEA 173
Query: 221 FQLADDLLDCEED---LPK 236
FQ+ADDL D D L K
Sbjct: 174 FQVADDLRDALLDETTLGK 192
>gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588]
Length = 295
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 20 LDDLLLQTASHMQTQ---HNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
L DL+ + + Q + L +A+ AL GK+ R+ L+ A +
Sbjct: 9 LRDLVEIRLAQISGQFGVVSAPLGAAMSDAALSPGKRFRAVLMLMVAESSGGVCDAMVDA 68
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SLI DD+P MD+ RRG+P H+ + E A++AG L+T A I+ +
Sbjct: 69 ACAVEMVHAASLIFDDMPCMDDARTRRGQPATHVAHGEGRAVLAGIALITEAMRILGEAR 128
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ R++L+ S++ +G G+ GQ LD+ Q +KTG L E
Sbjct: 129 GATP-DQRARLVASMSRAMGPVGLCAGQDLDLHAPKDAAGIERE-QDLKTGVLFVAGLEM 186
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+I+ + E E+L FG LG +FQ DDLLD D K
Sbjct: 187 LSIIKGLDKAETEQLMAFGRQLGRVFQSYDDLLDVIGDKASTGK 230
>gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 330
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 27/236 (11%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
L+ M +L SA Y +G GK++R ++ A+ NV+ + G
Sbjct: 86 SLVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIHEPMPNGVG 145
Query: 79 IECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+D+ RRG +++ A++AG+ L
Sbjct: 146 DTLGAELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVAVLAGDFL 205
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A ++S K ++ + ++ L +Q + D ++ +T
Sbjct: 206 LSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTSTSEQRCSMDHYMQKT------YY 259
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L+ +C++ A++A + +G++LG+ FQL DD+LD L K
Sbjct: 260 KTASLISDSCKAIALLAGQTTEVAMLAFEYGKSLGLAFQLIDDVLDFTGTSASLGK 315
>gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group]
gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group]
gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group]
gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group]
gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group]
gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 430
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 89/250 (35%), Gaps = 29/250 (11%)
Query: 10 QENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTECASL 64
+E + + D+L L M +L SA Y GK+ R ++ AS
Sbjct: 87 EEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASA 146
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHI 109
+ VG + +D+ RRG +++
Sbjct: 147 LKFPLSDSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNC 206
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+++AG+ LL+ A +++ ++ + + L +Q ++
Sbjct: 207 IMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQI------STSRE 260
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KT +L+ +C++ AI+A + + +G NLG+ FQL DD+LD
Sbjct: 261 QRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 320
Query: 230 CEE---DLPK 236
L K
Sbjct: 321 FTGTSASLGK 330
>gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
Length = 334
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 12/230 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
L + L++ + L + + + + + + + GK R L+
Sbjct: 9 SALAAALRDIQAPVQEELSQVSGELWRIVAADVP-LVREVQDHLMGMKGKLFRPTLLLLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+S+ + A+ A +E +H +L+HDD ++D+ +RRG PTV+ + ++I G+
Sbjct: 68 SSIEGRSPKRAITFAAVVELMHLATLVHDD--AVDHSALRRGMPTVNSLFSHQVSVIMGD 125
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + + + +T Q + E+ +
Sbjct: 126 FLYLRALRELVTIGDLEAMRSITNASNEMTLGEIRQLSAYDALA------FGESDYETLI 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ KT L AC+ GA ++ A +E + FGE LG+ FQ+ADDLLD
Sbjct: 180 RAKTATLFMAACDVGA-LSGA-PRYREAVTRFGERLGMAFQVADDLLDYT 227
>gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
Length = 315
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+Q++ + L + L + D + GGK++R L L
Sbjct: 5 IQQDLSDFEARLTEELYSPVEFIGAIGEDLVH-------AGGKRLRPSLAFLTGRLLGAE 57
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+RV A+E +H SL+HDDL +D+ RRG +Y V ++++G+ +L
Sbjct: 58 REAAMRVALAVELLHSASLLHDDL--IDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVL 115
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I++ + S+ + LQ + + + I + KT L
Sbjct: 116 GILAEADAPSFTRLMSETAARICEGEVLQFQMASLETYSLEHYNT------IIEGKTAVL 169
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A E A++A A+ + LR FG + G FQ+ DDLLD D L K
Sbjct: 170 LAAATEGVALLAGAAPGARRALRAFGLHYGRAFQMRDDLLDLMSDPETLGK 220
>gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
Length = 354
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 90/257 (35%), Gaps = 26/257 (10%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTA----------SHMQTQHNDRLLSAIRYAL-----LG 49
+ L E +D + DL+ + D + A+ L G
Sbjct: 1 MRETLAEWRPAVDEAIADLVPREIDTDYLESFFGEPTYEYDPDGIQRALSDPLWDLLDRG 60
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK+ R+ L F + + E +H ++I DD+ D RRG+P +H
Sbjct: 61 GKRWRAVLFLVFIEGFGEDPTEYMPYACIPEILHNGTIIVDDVE--DQAAKRRGEPALHH 118
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLD 166
Y A+ AGN L +++ L + L + + G +
Sbjct: 119 IYGRDVALNAGNALYFLPLKLLRENPGDLPAEQQLAAYEMLMDELNRTHLGQGMDICWHN 178
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
++ I Q + KTG L AI+ + +E + + E + FQ+ DD
Sbjct: 179 EREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAVATYAELTAVAFQIGDD 238
Query: 227 LLDCE------EDLPKK 237
+LD E + K+
Sbjct: 239 ILDVENSLGRAGEFGKE 255
>gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
Length = 340
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 9/185 (4%)
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
K +R LV CA + A+ A+E H +SL+HDD+ D
Sbjct: 63 KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDVMDGDRT---------RRH 113
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ + +++ L + + L T + L + Q
Sbjct: 114 RPTAWTVFGTGQAVLAGDSLLALAFDVLSADGPAAARLLSTAVLDLLHGQHEDLAFEQRT 173
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ + + + KT AL+ AC G ++ ER FG +LG+ FQ DDLL
Sbjct: 174 DVEVAECVRMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDLLGI 233
Query: 231 EEDLP 235
D
Sbjct: 234 WGDPA 238
>gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J]
gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J]
Length = 326
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 7/232 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+PS + + I+ + + + +Q ++ + + I+ + GGK +R +S
Sbjct: 1 MPSYWSQYPE-IEKEIKAVTQLIENRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSF 59
Query: 65 FNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ + + +D+ +RRG PT+ QY + A+ G+ L
Sbjct: 60 GPYQKERKEQLQKIAASLEILHMATLVHDDVIDDSPLRRGNPTIQTQYGKDVAVYTGDFL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T FE+I + + + L M ++
Sbjct: 120 FTVFFELILESMSNTPYMAINAKSMKKILVGELDQMHL-----YFNQKQSIRDYLRAISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A + GA + A + G ++G+ FQ+ DD+LD D
Sbjct: 175 KTAELFKLASQEGAYFSGADETVVRLAGRIGYHIGMTFQILDDILDYTADQK 226
>gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD1]
gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD1]
Length = 331
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 19 IASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVAGALGET 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F
Sbjct: 72 SHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDYLYSRSF 129
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ I S+ ++ LQ + D +DET+ + + KT L
Sbjct: 130 EMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIRYKTAKL 183
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA++A A + +G +G FQ+ DD LD
Sbjct: 184 FEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227
>gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
Length = 331
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPNTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A A+ ++ L +G+ LG FQL DDLLD D
Sbjct: 174 VIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLLDYTADSE 229
>gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
ATCC 6940]
gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
ATCC 6940]
Length = 363
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 23/256 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALLGGKKIRSFLV 58
+ +P+ +++ L + L Q + + + + L GGK+IR
Sbjct: 3 DSSIPT-IEQFPDLAREKLSEFLAQRRPEVAEIGEPVVNATNFLESFVLDGGKRIRPTYA 61
Query: 59 TEC-----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS--------------MDNGY 99
+ +++E I +LIHDD+ + +
Sbjct: 62 WAGFLGAHGLESGEDAQAMATAASSLEFIQACALIHDDIIDSSDTRRGNPTVHRAVAAQH 121
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+G + + AI+ G+ L +A +++ R++ S + G
Sbjct: 122 RAKGYHGDADFFGQSVAILVGDLALAWAEDMLQGSGLSGAALHRARGPWSGMRTEVIGGQ 181
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ L+ + + + GA +A A + R +G ++GI
Sbjct: 182 ILDISLEAAGSEDLALANSVNRYKTAAYTIERPLHLGAAVAGAEPALIDAFRGYGRDIGI 241
Query: 220 IFQLADDLLDCEEDLP 235
FQL DD L D
Sbjct: 242 AFQLRDDQLGVFGDPA 257
>gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
IAM 12614]
gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
IAM 12614]
Length = 338
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+++L+L A + A GGK++R L CA +F + + A+
Sbjct: 30 EVNELILSKAGSNVELIPEI---AKHLISSGGKRLRPMLTLACADMFGYQGDGHVTLAAS 86
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H +L+HDD+ +D +RRGK + +++ G+ LL AF+++ +
Sbjct: 87 VEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDVGSLE 144
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I S + LQ ++ E + + KT AL A E G +
Sbjct: 145 ALRILSTASAVIAEGEVLQL------GAAKNIATTEADYLRVIEAKTAALFAAAAEVGPV 198
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A S K R +G LG FQL DD LD DL K
Sbjct: 199 IAGQSAEMKRAARTYGMELGYAFQLVDDALDYGGSSADLGK 239
>gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
Length = 326
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 89/239 (37%), Gaps = 17/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + ++E + + + + + Y + GK++R V
Sbjct: 3 ITAQIKEPIREEMELFEQKFRSSMSSKVALLNRITY--------YIVNRKGKQMRPMFVF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + ++ A ++ +D+ RRG +++ + A++
Sbjct: 55 LVAKMVSGGKVSERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + I S + ++ LQ ++ +++ + +
Sbjct: 115 GDYLLSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYE------ 168
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA Q E++R FGE +G+ FQ+ DDL D ED K
Sbjct: 169 IIRQKTATLIAACCAMGACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227
>gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
Length = 326
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 89/239 (37%), Gaps = 17/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + ++E + + + + + Y + GK++R V
Sbjct: 3 ITAQIKEPIREEMELFEQKFRSSMSSKVALLNRITY--------YIVNRKGKQMRPMFVF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + ++ A ++ +D+ RRG +++ + A++
Sbjct: 55 LVAKMVSGGKVSERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + I S + ++ LQ ++ +++ + +
Sbjct: 115 GDYLLSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEEVYYE------ 168
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA Q E++R FGE +G+ FQ+ DDL D ED K
Sbjct: 169 IIRQKTATLIAACCAMGACSVQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227
>gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 327
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 91/235 (38%), Gaps = 10/235 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ +++ + I + + M ++ L Y + GK++R V A
Sbjct: 1 MAKIIEQIKEPIAQEMATFEDKFRQSMSSRVA-LLNRITHYIVNRKGKQMRPMFVFLVAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + A ++ +D+ RRG +++ + A++ G+ L
Sbjct: 60 LISNGIINERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + I S + ++ LQ ++ ++ + + I +
Sbjct: 120 LSKGLLLSIDNNDFDLLKIISVAVREMSEGELLQMEKARRLDITEEVYYE------IIRQ 173
Query: 184 KTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
KT L+ C GA +A + E++R FGE +G+ FQ+ DDL D E+ K
Sbjct: 174 KTATLIAACCAMGACSVAPENTTLIEKMRLFGECVGMAFQIKDDLFDYTEEAIGK 228
>gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080]
gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080]
Length = 346
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 75/234 (32%), Gaps = 9/234 (3%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTE 60
+ + L + K L + L + D L + Y + GG+ R L
Sbjct: 8 DSTVAEVLDDYGKITRAELKNWLPKGDPE------DYLYGPMSDYPMRGGRMFRPSLCIA 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A +F + + +IE +H LIHDD+ + + I
Sbjct: 62 TAKVFGASLEQVIPAAVSIELLHNALLIHDDIEDESDERRGKPTLHKKIGTPLALNAGDS 121
Query: 121 NGLLTYAFEI--ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
L+ I +S + I + Q + G D E + +
Sbjct: 122 LAFLSLRPIIRGSASMGSDSIVRILEEFDQMAQQTAEGQALDLGWRRDNHIELCEADYLK 181
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M+ K F GA++ + + L F LG FQ+ DD+L+
Sbjct: 182 MVLKKTCWLTTLFPIRLGALIGSGGRANLDSLFNFAFFLGAAFQIQDDVLNLIG 235
>gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
Length = 289
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDD 91
Q RL A+ YA GG +IR ++ A + + AA+E +HC SL+HDD
Sbjct: 22 QTPARLADALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDD 81
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
LP D+ +RRGK +VH Y E A++ G+ L+ +FEI++ + ++
Sbjct: 82 LPCFDDADLRRGKASVHRAYSEPLAVLTGDALIIMSFEILARVAHHDAGRATALILALAR 141
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ G+ GQ + + + + + KTGAL A + GAI A
Sbjct: 142 RSGMPNGICAGQGWESEPK----VDLEAYHRSKTGALFIAATQMGAIAAGHEPE---PWY 194
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
G +G FQ+ADDL D D
Sbjct: 195 ELGARIGAAFQVADDLRDALLDAE 218
>gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
Length = 280
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 21/230 (9%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
L+ I+ L ++ + + L +R+ L GGK++R +
Sbjct: 2 ELLERRRALIEERLHEV-------VDGVDPETLSDEVRHVTLSGGKRVRPMVTILACETV 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ G IE +H SL+ DD+ +D +RRG + ++ AII +GLL
Sbjct: 55 GGTAEDAVEFGVGIELVHNASLVIDDI--IDRSELRRGTESAWAEFGYGPAIITSDGLLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF++ +S ++ S + + G+ ++ +E + + + KT
Sbjct: 113 EAFDLFASDPDAMRVVTESMVE-----------LGVGEATELSAMPSNEEEYMTLARRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL A E GAI A + E L + E +GI FQ+ DD+LD D
Sbjct: 162 GALFRAAAELGAIAADSDAVTVEALGEYAERVGIAFQIRDDVLDAVADAE 211
>gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis]
Length = 293
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 7/223 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
T+L L + A L +A+ + AL G++ R L+ A T +
Sbjct: 11 TLLQTRLEEIAQGFGAVSQP-LGAAMSHGALSSGRRFRGMLMLLAAEASGGVCDTIVDAA 69
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E +H SLI DDLP MD+ +RRG+P H+ + E A++ G L+T A +++ +
Sbjct: 70 CAVEMVHAASLIFDDLPCMDDAGLRRGRPATHVAHGESRAVLGGIALITEAMALLAGAR- 128
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+R+QL+ L+ ++G QG+ GQ LD+ Q +KTG L E
Sbjct: 129 GASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNGAGVEQE-QDLKTGVLFIAGLEML 187
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A++ E+ ++ FG LG +FQ DDLLD D L K
Sbjct: 188 AVIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLDVVGDQAALGK 230
>gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum]
Length = 415
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 24/232 (10%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRV--- 75
LL M +L SA Y LG GK+ R ++ A+ NV +
Sbjct: 86 SLLTNRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATALNVQIPRSAPQVDV 145
Query: 76 ------------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A + +D+ RRG +++ A++AG+ L
Sbjct: 146 DSFSGDLRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFL 205
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A ++S K + + ++ L +Q + ++ +T
Sbjct: 206 LSRACVALASLKNTEVVCLLATVVEHLVTGETMQMTTSSDERCSMEYYMQKT------YY 259
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C++ A++A S +G+NLG+ FQL DD+LD
Sbjct: 260 KTASLISNSCKAIALLAGHSAEVSVLAFDYGKNLGLAFQLIDDVLDFTGTSA 311
>gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08]
Length = 365
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 61/250 (24%), Gaps = 24/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I+ + L + + +L A R GGK++R
Sbjct: 12 ADFRDSINARISSFLDNERRGIDAIGTELSPVLDAARDYTGGGKRLRPAFCYWGHVAAAG 71
Query: 68 NH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + +S LPS + E
Sbjct: 72 QPVAPSGLLQAAGSLEFLHVSALVHDDLIDHSNTRRGLPSAHRRFEAAHVTAHGDGSAEQ 131
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
L S T + + GQ+LD+ +
Sbjct: 132 FGFDVAILLGDLLLMWSSQMFTSAPVEADRLAAAIPLFDAMRTEVTCGQVLDVTSQSGMA 191
Query: 175 TQV---------FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+++ + + G +A S ++ + FG +G FQ D
Sbjct: 192 GSDSESALDLVGRVVEYKCASYTVVRPSQIGVALAGGSSRLQQTMADFGSPIGRAFQYRD 251
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 252 DLLGVFGDAE 261
>gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
Length = 359
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 78/249 (31%), Gaps = 22/249 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECAS 63
+L + + L L Q H+ + +A+ + L GGK++R
Sbjct: 6 ELADIPGAVREKLAIFLDQRREHVAEIGAP-VSTAMSFLESFVLDGGKRVRPMYAWAGYL 64
Query: 64 LFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAII 118
+ LR +++E I +LIHDD+ N + + E +
Sbjct: 65 AAGRGSESPEAMLRAASSLEFIQACALIHDDIIDASNTRRGKPTVHREAERLHRESDFLG 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
T ++ +++ LS + G ++ + + +
Sbjct: 125 DPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRAREPWRGMRTEVLGGQLLDISLE 184
Query: 179 MI------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + GA +A A + R +G ++GI +QL DD
Sbjct: 185 AAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGAREELISAFRGYGHDIGIAYQLRDD 244
Query: 227 LLDCEEDLP 235
L D
Sbjct: 245 QLGVFGDPA 253
>gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 362
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 18/243 (7%)
Query: 8 KLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
L N + ++T L+ L+ + + + ++ +R + GGK++R L
Sbjct: 13 DLLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAG 72
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA--------- 116
A V AA ++ MD+ RRGKPTVH +
Sbjct: 73 GGAGDMAAVVQAAASLEMFHAFALIHDDLMDHSDTRRGKPTVHRSLAAHHSALRGQEAAS 132
Query: 117 -------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
I+ G+ L ++ E++ + ++ + G
Sbjct: 133 HLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLDLCAAGDP 192
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + GA +A A E + LG FQL DDLL
Sbjct: 193 TLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDLLG 252
Query: 230 CEE 232
Sbjct: 253 VYG 255
>gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate
synthase [Natronomonas pharaonis DSM 2160]
Length = 353
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 27/256 (10%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTA----------SHMQTQHNDRLLSAIRYAL-----LG 49
+ L+ +D ++ +L +T L A+ + G
Sbjct: 1 MQRVLESWRPAVDETIESVLPRTVDDAYLTSFFGEATYAYDPSALQHALSDPVWELLDRG 60
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK+ R+ L + + L A E +H ++I DD+ D RRG P +H
Sbjct: 61 GKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVE--DGATHRRGDPALHH 118
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLD 166
+ A+ AGN + +II+ L + R L + + + G +
Sbjct: 119 THGTDIALNAGNAMYFLPLKIITHNPADLDADTRLAAYEMLMYELNRTHLGQGMDIHWHN 178
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
Q+ I E Q + KTG L AI+ + ++ + L + E + I FQ+ADD
Sbjct: 179 QQEIDITEDQYLEMCACKTGCLARIVARLAAIVTN-NEAAESDLAAYAEEMAIAFQIADD 237
Query: 227 LLDCE------EDLPK 236
+LD E D K
Sbjct: 238 VLDVEYALEEGGDFGK 253
>gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 295
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLT 71
+R++ + + + RL A+ YA+ GG +IR ++ A +
Sbjct: 5 ERVEAAIAAAVGF---GLGPDAPPRLAQALPYAVTPGGARIRPTILLSVAIACGDDRPGL 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AA+E IHC SL+HDDLPS D+ IRRGKPT+H ++E A++ G+ L+ AF+++
Sbjct: 62 SNAAAAALELIHCASLVHDDLPSFDDADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + G+ GQ + + + KTGAL
Sbjct: 122 ARAAEDAPGRGLGLIRTLAKRSGMPDGICAGQGWESEPTVNLSA----YHRSKTGALFIA 177
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A GA A G +G FQ+ADDL D D
Sbjct: 178 ATCMGAQAAGQEPE---PWVELGSRIGEAFQVADDLRDALYDAE 218
>gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
Length = 331
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 13 AHLLAPITSDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 66 GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DET+ + +
Sbjct: 124 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIR 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + +G +G FQ+ DD LD
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRVGTAFQIMDDWLDYAGTAE 230
>gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
Length = 280
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 24/234 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
L+ +D L+ S + + D L + + AL GGK++R +
Sbjct: 2 EYLERRRALVDERLE-------SVVGSVEPDGLAEEVGHTALSGGKRVRPTVTVLVCEAV 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ G IE +H SL+ DD+ +D +RRG + +Y AI+ + L
Sbjct: 55 GGEPDDAVGFGVGIELVHNASLVIDDI--IDRSAMRRGVESAWTRYGYGPAIVGSDAQLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF + S S + + + G+ ++ E + + + KT
Sbjct: 113 EAFALFS-----------SDPRATQAVTEAMVELGEGEATELVARPETEAEYMELARRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
GAL A E GAI A A E + + E +GI FQ+ DD+LD DL K
Sbjct: 162 GALFRAAAELGAIAADADAVTVEAVGEYAERVGIAFQIRDDVLDATADADDLGK 215
>gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
Length = 331
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 95/236 (40%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A AS ++ L +G+ LG FQL DDLLD D
Sbjct: 174 VIYCKTAKLFEAATLLAAVLAGASTEQETALGNYGKYLGTAFQLTDDLLDYTADTE 229
>gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 326
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+PS L+ + + ++ + + ++ + + S GGK++R+ +V +
Sbjct: 9 EIPSTLRHDLQAVEDRIMQRVESQSALITAAGQHIVSS-------GGKRLRAMMVLLASQ 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L +L A+E IH SL+HDDL +D+ RRGK TVH ++D+ A++ G+ L
Sbjct: 62 LGRYRLSDSLHAATAVELIHAASLVHDDL--VDDADRRRGKVTVHAKWDQGVALMVGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A ++ I ++ +++++ + M +++ +
Sbjct: 120 FAVAAGEMALAPDPRVIQIFAESVMTISASELHPVMATLPTATALEQYYAKIGGKTAALF 179
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A C S E E +G ++G+ FQ+ DD+LD
Sbjct: 180 EAAAAAGVVCGG------GSPEEIEAAARYGYDIGLAFQIVDDILDFVSTEE 225
>gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2M]
gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2]
gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2]
gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
multivorans CGD2M]
Length = 331
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 19 IASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVAGALGET 71
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +F
Sbjct: 72 SHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDYLYSRSF 129
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ +I S+ ++ LQ + D +DET+ + + KT L
Sbjct: 130 EMMVGVGKMRVMDILSEATTIISEGEVLQLLNM------HDADVDETRYMQVIRYKTAKL 183
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA++A A + +G +G FQ+ DD LD
Sbjct: 184 FEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227
>gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B]
gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B]
Length = 339
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 89/230 (38%), Gaps = 10/230 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSA-IRYALLGGKKIRSFLVTECA 62
P+ L +D L + + + A ++ A R GGK +RS L A
Sbjct: 7 PAVLSAVRDLVDRPLREAIDRLAPKIRRVAAYHFGWEEADGRPGNGGGKAVRSALAVLSA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+E +H +SL+HDD+ MD RR +PT + A++AG+
Sbjct: 67 QAAGAPAAVGIPGAVAVELVHNFSLLHDDV--MDGDEERRHRPTAWTVFGRSAALLAGDA 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL AF+++ + + LD+ + +
Sbjct: 125 LLGLAFDVLLDAEHGDAAQRCLGSATQELIAGQFDDLDFETRLDVSL-----DECVSMAG 179
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT ALM A GA +A A L FG +LG+ FQL DDLL
Sbjct: 180 AKTAALMACASSIGARLAGADPALVNALDDFGRHLGLAFQLVDDLLGIWG 229
>gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
aurantiaca DW4/3-1]
gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
aurantiaca DW4/3-1]
gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 332
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 14/232 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLF 65
KL ++ L +L+ + D L+ A R+ LG K+ R LV+
Sbjct: 6 KLSNFLGIVEQQLGAVLVDGDAG-PGVMGDTLMEAARHLCLGSGSKRARPMLVSLFGDAV 64
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
++ + V + E IH SL+HDD+ +D G RRG+PTV+ ++ + A+++G+ +L+
Sbjct: 65 GLSSEHLVDVAVSAELIHSASLLHDDV--VDAGMFRRGRPTVNARWGNIVAVMSGDLILS 122
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
++ +L + S + + ++ + ++ I + KT
Sbjct: 123 TTLLRLAQLDERLSRSALSVVSE-------MTRAAITEVEARGVMELPLPRLRYIAEGKT 175
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
G+L + + A +A+ +R FG +LG+ FQ+ADD+ D D+ K
Sbjct: 176 GSLFGWCGHAAATLANQ-PEAAKRFDGFGRHLGVAFQIADDIRDVLGTDVGK 226
>gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
Length = 264
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
KL ++++ L +L L A+ Y L GGK+IR L+
Sbjct: 3 KLSLWKEKVEVKLRQILA-------PSEPLLLYEAMSYYPLQGGKRIRPLLLCGVCDALG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N A+ VG AIE IH YSLIHDDLP++DN RRG P+ HI + E A++AG+ LLT
Sbjct: 56 GNVEDAVVVGCAIELIHNYSLIHDDLPALDNDPQRRGLPSCHIAFGEDIALLAGDALLTL 115
Query: 127 AFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
AF+++S Q++ + ++ ++ G +GM+GGQ++D I K
Sbjct: 116 AFQVLSDVSQFNQVEPSDLLLIIHEISRRAGSEGMVGGQVMD----IRGIGDRREINLKK 171
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-------DLPK 236
T L S I+A ++ + L G G++FQ+ DD D + DL K
Sbjct: 172 TAQLFAACFVSAGIIAKK-KSMLKDLEKVGIRTGLLFQMCDDWKDKDGYFKLLGEDLAK 229
>gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
Length = 360
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 72/241 (29%), Gaps = 18/241 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
+R+D L D L + M + A+ + L GGK++R
Sbjct: 16 RQRVDKALADFLAARRTWMTDVDGSLAPVADAVEAFVLGGGKRLRPAFAYWGYRGAGGID 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSM---------------DNGYIRRGKPTVHIQYDEV 114
+ A S + D + G + +
Sbjct: 76 TEQVATALAALEFVQASALIHDDLMDRSDTRRGEPAVHLRFAAQHRSAGWDGDADGFGDA 135
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+ G+ L ++ E++ S + R++ + + G + + E
Sbjct: 136 AAILLGDLCLVWSDELLHSAGLDPRTVARARPIFDQMRSEVTVGQYLDVLTQATGDTSVE 195
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + GA +A A+ +G LG FQL DD+L D
Sbjct: 196 WAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGLPLGEAFQLRDDVLGVFGDP 255
Query: 235 P 235
Sbjct: 256 A 256
>gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 275
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 16/234 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ S ++ + L ++ + + + + Y + GK +R L+ A
Sbjct: 1 MSSFIKA-KNAVSKELCEVEMILKNIGKDFSSGSTQEIFEYFFKVPGKYLRPSLIILSAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIH---DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N R+ C+ + +DN RRG+ T++ Y A++AG
Sbjct: 60 AINPEMTIDERMKLINLCVAIELIHSASLVHDDIIDNDLFRRGQKTLNNIYGRKIAVLAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ AF I+ T ++ M ++ Q+ I + F I
Sbjct: 120 DAFYAKAFSILLKLPTNDA---------EQIITQVIEKMCVAEIEQAQNHEITKQDYFNI 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT + M C+ GA +A + E E L +G NLG+++Q+ DD D D
Sbjct: 171 IEGKTASFMAACCKLGAKTVNAKEEEIEALENYGLNLGMLYQIIDDCTD--GDS 222
>gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT]
gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT]
Length = 289
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 38 RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+ I Y L+ GK++R ++ + F + AL A+E H SLIHDD+ +D
Sbjct: 26 HVGEVIEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVELAHAASLIHDDI--LD 83
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
G RRG P+ ++ +++AG+ L++ + +ISS +
Sbjct: 84 CGVERRGAPSAFRRFGMEASLLAGDYLISMSIGLISSYGEP----------AIRLFSKAC 133
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
M G+++D+ + I KT +L + G ++A A + ++ +G
Sbjct: 134 MDMAEGEIIDLSRIASPQEYYQCI-TKKTASLFAASARLGCMIAGADREDQILYERYGLE 192
Query: 217 LGIIFQLADDLLDCEE-DLPKK 237
LG+ +Q+ DDL + D K+
Sbjct: 193 LGLAYQIVDDLEELIGIDQGKR 214
>gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3]
gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
Length = 309
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLT 71
K I+ L + + L A+ A+ GG ++R L + + + +
Sbjct: 15 KLIEQALR---AAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPEL 71
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ +
Sbjct: 72 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + + G++ GQ ++ KTG+L
Sbjct: 132 SLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPI----DRYHHYKTGSLFVA 187
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA+ + A GE LG +Q+ADD+ D
Sbjct: 188 AATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 225
>gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus]
Length = 337
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 12/241 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTA-SHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
M G LP + + + L D+ + + L Y L G GK IR L
Sbjct: 5 MPGSLPDYQIDPYRLAEDDLKDMFDDIRLELITNTTQEELQPISTYYLDGQGKAIRPILT 64
Query: 59 TECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
A N + + A+ +S +D IRRGKP+V++ + +
Sbjct: 65 ILMARAINYHKGRNVLSHSQRQIAMISEMIHSSSLLHDDVIDQSDIRRGKPSVNVVWSQK 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+AG+ +L A ++S + SQ++ L +Q + E
Sbjct: 125 KVAMAGDYILAVACRMLSRLQNDEVTITISQIVTDLVQGEFMQL------GSKETENERF 178
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
KT +L+ ++ AI+A + E +G N+G+ FQL DDLLD
Sbjct: 179 AHYLTKTYRKTASLIANCSKAVAILAEVDDHMIEMAFQYGRNVGLAFQLVDDLLDFVASS 238
Query: 235 P 235
Sbjct: 239 E 239
>gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 96/256 (37%), Gaps = 28/256 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLV 58
+ L + + + L LL M +L SA Y +G GK+ R ++
Sbjct: 74 SSSLAEEQLDPFSLVADEL-SLLADRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVL 132
Query: 59 TECASLFNVN---------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
A+ NV L + A + +D+ RRG
Sbjct: 133 LLMATALNVPLPRPALAEVPETLSTELRTRQQCIAEITEMIHVASLLHDDVLDDAETRRG 192
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+++I A++AG+ LL+ A ++S K ++ + ++ L +Q +
Sbjct: 193 IGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETMQMTSTSE 252
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ + KT +L+ +C++ A++A + +G+NLG+ FQL
Sbjct: 253 QRVSMEYY------LQKTYYKTASLISNSCKAIALLAGQTAEVSMLAFEYGKNLGLAFQL 306
Query: 224 ADDLLDCEE---DLPK 236
DD+LD L K
Sbjct: 307 IDDVLDFTGTSASLGK 322
>gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str.
Illinois]
gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str.
Illinois]
Length = 256
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 114/233 (48%), Gaps = 21/233 (9%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+ KLQ+ S+ I L + L S D+L AIRY+LL IR FLV E
Sbjct: 2 TVKKKLQKASRLIHETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELG 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LFN+ ++ + V AAIE IH +SLIHDDLP++DN RR +P HI + E TAI+AG+
Sbjct: 56 TLFNIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACHIAFQESTAILAGDA 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A++I+S L + I K
Sbjct: 116 LLVLAYQILSHYGAPLVQRTS------------KYVLEMITGQVHDVIGSSTLTADEINK 163
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MK+G+L +C S +A+++Q+E L FG +GIIFQ DD+ D D
Sbjct: 164 MKSGSLFALSCSSVGHLANSAQSELTVLEAFGYEIGIIFQAVDDIKD--GDAK 214
>gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
helveticus]
Length = 313
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 10/233 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+LQ K I+ LD LL Q T+ +D + A+R A L GK+IR L+ A
Sbjct: 15 ELQSMRKNIEHRLDSLLPQ------TEESDLVTQAMRDATLAPGKRIRPLLMLLTARDLG 68
Query: 67 VNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E IH SL DD+P MDN +RRG PT+H ++ E AI+A LL
Sbjct: 69 CEPSHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGLPTIHRKFGENVAILAAVALL 128
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKM 183
+ AF ++S+ + + + G + T+ +
Sbjct: 129 SKAFGVVSAAEGLTDAGRAIAVGELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTNDL 188
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KTG L + + AI A+AS + RLR F + G FQL DDL+D K
Sbjct: 189 KTGVLFSASLQMAAIAANASGAARARLRSFALDFGQAFQLLDDLIDGLATTGK 241
>gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
Length = 328
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLT 71
K I+ L + + L A+ A+ GG ++R L + + + +
Sbjct: 34 KLIEQALR---AAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPEL 90
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ +
Sbjct: 91 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 150
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + + G++ GQ ++ KTG+L
Sbjct: 151 SLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPI----DRYHHYKTGSLFVA 206
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA+ + A GE LG +Q+ADD+ D
Sbjct: 207 AATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 244
>gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
Length = 431
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 33/256 (12%)
Query: 6 PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
S+ QE + + D+L L M +L SA Y GK+ R ++
Sbjct: 84 ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 143
Query: 61 CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
AS + E IH SL+HDD+ +D+ RRG
Sbjct: 144 MASALKFPLSESTEGGVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 201
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
++++ +++AG+ LL+ A +++ ++ + + L +Q
Sbjct: 202 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQI----- 256
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+++ KT +L+ +C++ AI+A + +G NLG+ FQL
Sbjct: 257 -STSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQL 315
Query: 224 ADDLLDCEE---DLPK 236
DD+LD L K
Sbjct: 316 IDDVLDFTGTSASLGK 331
>gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
Length = 303
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ LD+L+ + + ++ A+R+ + GGK+ R +V L +
Sbjct: 11 VNEALDNLVNEVDAI------PKVKKALRHIIKAGGKRTRPIIVLLSGRLCGGEWSEVMN 64
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V A+E IH SL HDD+ +D G +RR T+H++YD AI+ G+ L++ + E++S
Sbjct: 65 VALAVELIHTASLAHDDV--IDRGVVRRNVETLHVKYDTSLAILVGDWLISKSVELVS-- 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
N + + +G + F +E I L ++ +
Sbjct: 121 ----VYNEEVIRDFARVGMMMAEGEIMDIDSIKNGGFGEEDYFKCIAAKTAS-LFAYSAK 175
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + E L +G NLGI +QL DDLL+
Sbjct: 176 NACRIVSDDKKAAEYLFNYGNNLGIAYQLVDDLLEY 211
>gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae
A909]
gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae
A909]
Length = 326
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 15/231 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++N + ++ + + ++ +L +A GGK++R + L N
Sbjct: 10 ELKKNIDETNQLIQERIQVRNKDIEAAL-SQLTAA------GGKQLRPAFFYLFSQLGNK 62
Query: 68 NHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++ + + +D+ +RRG T+ ++ + A+ + L T
Sbjct: 63 ENQDTQQLKKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTRDLLFTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F++I + + L M KT
Sbjct: 123 FFDLILESMADTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHY-----LRAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L A + GA A + G N+G+ FQ+ DD+LD D KK
Sbjct: 178 ELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226
>gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa]
gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase
gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa]
gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa]
Length = 323
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 90/235 (38%), Gaps = 12/235 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
+ + ++ L DLL + + + L +A + GK+ R +V +
Sbjct: 2 ASITNILAPVENEL-DLLTKNLKKLVGSGHPILSAASEHLFSASGKRPRPAIVLLISKAT 60
Query: 66 NVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N + R E ++ +D +RRG PTVH + AI+AG+ L
Sbjct: 61 MENEIITSRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAILAGDFLF 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +++ ++ + S+++ +G+ ++ +E+++++ +
Sbjct: 121 AQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLA 180
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ H L +G +LG+ FQ+ DD+LD +L K
Sbjct: 181 ASSKAAALLS------HVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGK 229
>gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae
NEM316]
gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
Length = 326
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 81/231 (35%), Gaps = 15/231 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++N + ++ + + ++ +L +A GGK++R + L N
Sbjct: 10 ELKKNIDETNQLIQERIQVRNKDIEAAL-SQLTAA------GGKQLRPAFFYLFSQLGNK 62
Query: 68 NHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++ + + +D+ +RRG T+ ++ + A+ G+ L T
Sbjct: 63 ENQDTQQLKKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F++I + + L M KT
Sbjct: 123 FFDLILESMADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHY-----LRAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L A + GA A + G N+G+ FQ+ DD+LD D KK
Sbjct: 178 ELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226
>gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum]
Length = 446
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L+++ K + + D L + + + D L Y G GK IR + A N
Sbjct: 127 LEDDLKDVYVYIRDALRR------STYQDDLYEIATYYFDGHGKAIRPMVAILMARAINY 180
Query: 68 NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ ++ +D RRGKP+V++ ++ +AG+
Sbjct: 181 HIYKEKSGLLTSQREVAMISEMIHTASLVHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGD 240
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L A +I+ K + SQ++ L +Q + E
Sbjct: 241 FILAVASIMIARLKNNDVTLVLSQVVSDLVQGEFMQL------GSKETENERFAHYLTKT 294
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ + +S ++A A + + +G NLG+ FQL DDLLD
Sbjct: 295 YRKTASLIANSVKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVSSSA 348
>gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
Miyayama]
gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
Miyayama]
Length = 256
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 122/233 (52%), Gaps = 21/233 (9%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
+ KLQ+ S+ I L + L S D+L AIRY+LL IR FLV E
Sbjct: 2 TVKKKLQKASRLIRETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELG 55
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+LFN+ ++ + V AAIE IH +SLIHDDLP++DN RR +P HI + E TAI+AG+
Sbjct: 56 TLFNIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDA 115
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL A++++S T L + + M+ GQ+ D+ I K
Sbjct: 116 LLVLAYQMLSRYGTP----------LVQCTSKYVLEMITGQVHDVIGSSTLTADE--INK 163
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MK+G+L +C S +A++ Q+E L FG +GIIFQ DD+ D D
Sbjct: 164 MKSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD--GDAK 214
>gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 442
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 77/265 (29%), Gaps = 36/265 (13%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
PS L R+D L + ++ + + +R + GK++R+
Sbjct: 75 PSALDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLRAVVARGKRLRAAFCYWGWR 134
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
+ + AA + + + +D+ +R G PT H
Sbjct: 135 AAGRDDTDDIVRAAAAMELVHAAAVV-HDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAA 193
Query: 110 ---------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ GL L + + L +
Sbjct: 194 RSAAGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRT- 252
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G + G + D + ++ + +++ + GA++ A + +G
Sbjct: 253 GPSVLDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYG 312
Query: 215 ENLGIIFQLADDLLDCEED---LPK 236
LG FQL DDLL + K
Sbjct: 313 VPLGEAFQLRDDLLGVFGEPDTTGK 337
>gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 439
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 77/265 (29%), Gaps = 36/265 (13%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
PS L R+D L + ++ + + +R + GK++R+
Sbjct: 72 PSALDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLRAVVARGKRLRAAFCYWGWR 131
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
+ + AA + + + +D+ +R G PT H
Sbjct: 132 AAGRDDTDDIVRAAAAMELVHAAAVV-HDDLIDHSAVRHGSPTAHRALVPPGRAVGDDAA 190
Query: 110 ---------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ GL L + + L +
Sbjct: 191 RSAAGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRT- 249
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G + G + D + ++ + +++ + GA++ A + +G
Sbjct: 250 GPSVLDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYG 309
Query: 215 ENLGIIFQLADDLLDCEED---LPK 236
LG FQL DDLL + K
Sbjct: 310 VPLGEAFQLRDDLLGVFGEPDTTGK 334
>gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988]
Length = 352
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 68/243 (27%), Gaps = 16/243 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ R++ L LL H + + GGK+IR
Sbjct: 18 ADLLHRVEDRLRSLLAVERDAWAAVHEQAVVPVDALSELIASGGKRIRPAFCITGYLAAG 77
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------QYDEVTA 116
+ V A + +D+ RRG PTVH E
Sbjct: 78 GDPAEPGIVAAGAALEMLHLSALVHDDVLDDSSSRRGVPTVHTQAMALHESSGWQGEPRR 137
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
G +L ++ S + + R + + + G + +
Sbjct: 138 YGEGVAILVGDLALVYSEELMAEAPRRVLPEWNKLRSEVMIGQYMDVHAAAEFSVDPRSS 197
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
+ + + GA + L +GE +G FQL DDLLD +
Sbjct: 198 RLIARIKSGRYTIHRPLVVGAKRGRGRGDLAPALEEYGEAVGEAFQLRDDLLDASATPAE 257
Query: 234 LPK 236
K
Sbjct: 258 TGK 260
>gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512]
Length = 309
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLT 71
K I+ L + + L A+ A+ GG ++R L + + + +
Sbjct: 15 KLIEQALR---AAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPEL 71
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++ G+ L+ AF+ +
Sbjct: 72 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + + G++ GQ ++ KTG+L
Sbjct: 132 SLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPI----DRYHHYKTGSLFVA 187
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA+ + A GE LG +Q+ADD+ D
Sbjct: 188 AATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 225
>gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
Length = 328
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 75/211 (35%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ + TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS]
gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS]
gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS]
Length = 359
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 19/240 (7%)
Query: 15 RIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-- 69
+ L D L + A+++ + + + + + L GGK++R
Sbjct: 14 AVTEQLRDYLSARRRDAAYIGSDYAELTAALEEFVLRGGKRLRPAFAYWGWRAVADRPAD 73
Query: 70 ----------LTALRVGAAIECIHCYSLIHDDLPSM----DNGYIRRGKPTVHIQYDEVT 115
+ + S LP++ + + RG Q+
Sbjct: 74 SGVLLLFSALELLHACALVHDDVIDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLSA 133
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ L +A +I++S L + R Q + + L G + +
Sbjct: 134 AILAGDLSLVWADDIVASVDLPLDAHRRVQRVWADIRTEVLGGQFLDIAAEASGAQTVAS 193
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + + GA A E G ++G+ FQL DD+L D
Sbjct: 194 AMTVNTYKTASYTVSRPLQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVLGVFGDPA 253
>gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152]
gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152]
Length = 325
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+++ + + D +L + Y + GK++R V A + +
Sbjct: 11 IKKEMELFEKKFKDSMLSKVPLLNRITY--------YIVRRKGKQMRPMFVFLVAKMVSN 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 63 GGFDERTYRGASVVELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDFLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + S + ++ LQ ++ +D + D I + KT
Sbjct: 123 LLLSIDNEDFDLLKLISIAVREMSEGELLQIEKARKLDITEDIYFD------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PK 236
L+ C GA A+Q+ +++R FGE +GI FQ+ DDL D D K
Sbjct: 177 LIAACCGIGAASVGANQDTVQQMRKFGEYIGIAFQIKDDLFDY-SDEKIGK 226
>gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
149]
gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
149]
Length = 294
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTA 72
RI+ + + + RL SA+ YA GG +IR ++T A +
Sbjct: 6 RIEAAIAQAVA--VGQGRGAVPVRLSSALGYATAPGGARIRPTILTSVAMACGDDQPKLT 63
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
AA+E IHC SL+HDDLP D+ +RRGKP+VH Y E A++AG+ L+ AFEI++
Sbjct: 64 DAAAAALELIHCASLVHDDLPCFDDADMRRGKPSVHKAYSEPLAVLAGDSLIVLAFEILA 123
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
D + +++ GM GG E E + + KTGAL A
Sbjct: 124 RESGLAPDRVAQMILILSQR----TGMPGGICAGQGWESEAEIDLSAYHQAKTGALFIAA 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ A G +G FQ+ADDL D D
Sbjct: 180 TQMGAVAAGQDAE---PWFELGARIGEAFQVADDLRDALYDAE 219
>gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae
H36B]
gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae
CJB111]
gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae
CJB111]
gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae
H36B]
Length = 326
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 81/231 (35%), Gaps = 15/231 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++N + ++ + + ++ +L +A GGK++R + L N
Sbjct: 10 ELKKNIDETNQLIQERIQVRNKDIEAAL-SQLTAA------GGKQLRPAFFYLFSQLGNK 62
Query: 68 NHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++ + + +D+ +RRG T+ ++ + A+ G+ L T
Sbjct: 63 ENQDTQQLKKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F++I + + L M KT
Sbjct: 123 FFDLILESMADTPFMTINAKSMRKILMGELDQMHLRYNQQQGIHHY-----LRAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L A + GA A + G N+G+ FQ+ DD+LD D KK
Sbjct: 178 ELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226
>gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
Length = 452
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 77/240 (32%), Gaps = 11/240 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
+ LQ + I ++D + L + Y GK +R + A
Sbjct: 95 INEALQGSRDAIFVKIEDFIQSQRQVSGAYTP--LYELLSDYPFRVGKMLRPTMCISVAR 152
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+AL AA+E H LIHDD+ +G I + +
Sbjct: 153 AVGGMGHSALTAAAALELYHNAFLIHDDIEDESESRRGKGTLHQMIGIPRAINVGDATNV 212
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
L + + + + + ++G + D+ M
Sbjct: 213 LAVGLLLENLSVLGVSKALNILHEIEFMARQSVEGQAMELDWVATNPSHLSDQDYFTMCV 272
Query: 182 KMKTGALMCFACESGAIMAHASQNEKER------LRCFGENLGIIFQLADDLLDCEEDLP 235
K C G I+ H + + ++ L FG LGI FQ+ DDLL+ + ++
Sbjct: 273 KKTCWYSFITPCRIGLIVGHPASSVQDLIEPLAGLTRFGMILGIAFQIQDDLLNLQGEME 332
>gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 319
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ ++I L++ +L+ + + N+ + I+ GGKK+R FL+ AS + +
Sbjct: 5 DKFYQKICNKLNENILEITNSKRRIINEAVSDLIK---GGGKKLRPFLMFLAASFGDYDQ 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L++G+ IE +H SL+HDD+ +DN +RRGK T ++ + A+ G+ LL+ +F
Sbjct: 62 EKLLQLGSGIELLHMSSLLHDDV--IDNAKLRRGKKTAQHKFGKEEAVFIGDFLLSRSFN 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I + ++ + L Q + ++ + KT
Sbjct: 120 IFFKYLDKSTLGKMNKNVSLLCEGEIEQSEKKFDLEISMRDYYRR------IRHKTALFF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA ++ + L G +G+ FQ+ DDLLD E +
Sbjct: 174 ALSSYLGAYVSGVRGKKLNLLYKLGLEIGMAFQIKDDLLDFEGEEE 219
>gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
Length = 328
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 87/237 (36%), Gaps = 20/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +L E KR++ +T + I GGK +R +
Sbjct: 11 PALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A ++ +D +RR +P + Q+ V ++ AG+
Sbjct: 60 Q-FGPEQDRDKAIALAASIEMLHTATLIHDDIVDEADLRRSQPNIRSQFGNVVSVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+++S T LK + + N GQM D + + +
Sbjct: 119 LFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNG-----ELGQMDDRYNYELSVKEYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L +C GA + S+ ++ G ++G+ FQ+ DD+LD +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230
>gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
Arkansas]
gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
Arkansas]
Length = 325
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + + LD + H +H + +++ + GGK+IR +
Sbjct: 1 MTNDFSNTFLQLKSLVQQDLDS-MESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFF 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N N+ + + AAIE IH +L+HDD+ +D +RRG+ T ++ + +I+
Sbjct: 60 IICKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSNVIWGNKASILV 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL +F+ + K +I SQ + Q + + I + +
Sbjct: 118 GDFLLAISFQWLIKCKNLNILSILSQASKDVIVGEVQQMI------SSHNINISKEKYIE 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I KT AL CES A +A S EKE L+ FG N GI FQ+ DD+LD K
Sbjct: 172 IISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGK 231
Query: 237 K 237
K
Sbjct: 232 K 232
>gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
Length = 277
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 8/181 (4%)
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+R L A A IE IH +L+HDD+ +D +RRGK T + +
Sbjct: 1 LRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFG 58
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
+++ G+ + T +F++++ + + S + + Q M +
Sbjct: 59 NAASVLVGDFIYTRSFQMMTELGSMKILQLMSNAVNVIAEGEVQQLMNCNDPDTTE---- 114
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L A + GAI+ A ++ + L+ +G+ LG FQL DD++D
Sbjct: 115 --ESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTS 172
Query: 233 D 233
D
Sbjct: 173 D 173
>gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
RA-GD]
Length = 325
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + ++E + I + + MQ++ L R+ + GK++R CA
Sbjct: 1 MANIVEEIKRPIGAEMKLFEQKFYESMQSKVP-LLDKVTRFIVTTKGKQMRPMFAFLCAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + R + IE IH +L+HDD+ +D + RR +++ + A++ G+ L
Sbjct: 60 LVGDVNEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + + + K ++ S + ++ LQ ++ ++ + + I +
Sbjct: 118 LSKSVLLSTDNKDFDLLSVISTTIREMSEGELLQLEKARKLDITEEVYYE------IIRQ 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L+ CE G + + +++R FG G+ FQ+ DDL D
Sbjct: 172 KTATLIAACCEIGVLSNGVDETMAKKMRDFGTYTGMAFQIKDDLFDYLS 220
>gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays]
Length = 428
Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 33/256 (12%)
Query: 6 PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
S+ QE + + D+L L M +L SA Y GK+ R ++
Sbjct: 81 ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 140
Query: 61 CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
AS + E IH SL+HDD+ +D+ RRG
Sbjct: 141 MASALKFPLSESTEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 198
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
++++ +++AG+ LL+ A +++ ++ + + L +Q
Sbjct: 199 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQI----- 253
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+++ KT +L+ +C++ AI+A + +G NLG+ FQL
Sbjct: 254 -STSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTTEVSVLAYEYGRNLGLAFQL 312
Query: 224 ADDLLDCEE---DLPK 236
DD+LD L K
Sbjct: 313 IDDVLDFTGTSASLGK 328
>gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
Length = 242
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + + ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 14 AHLLAPIASDMEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N + A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE + + +
Sbjct: 125 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A GA++A A + +G +G FQ+ DD LD
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 231
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 43 IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+RY+LL GGK++R L L + A+ A+E IH SLIHDDLP MDN R
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RGKPT H + E TA++AG+ LL++AFE I+ ++ + R+ ++S L
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120
Query: 162 GQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G + +D + I KT L+ + +G I+ A+++E R+R +
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177
>gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980]
gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980]
Length = 328
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 20/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +L E KR++ +T + I GGK +R +
Sbjct: 11 PALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A ++ +D +RRG+P + Q+ V ++ AG+
Sbjct: 60 Q-FGPEQDRDKAIALAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+++S T LK + + N GQM D + + +
Sbjct: 119 LFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNG-----ELGQMDDRYNYELSVKEYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L +C GA + S+ ++ G ++G+ FQ+ DD+LD +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230
>gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2]
gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2]
Length = 229
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 91/166 (54%), Positives = 119/166 (71%), Gaps = 2/166 (1%)
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
LRV AA+ECIHCYSL+HDDLP+MD+ +RRG+PTVH +DE AI+AG+ LLTYAF+II
Sbjct: 1 MLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDII 60
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALM 189
+S +T+L R +L+ +LT GL GM GGQ LD+ E + +I Q MKTGAL+
Sbjct: 61 ASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALI 120
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
FACE+GAI+A AS+ ++ER+ FG +G+ FQLADDLLD D
Sbjct: 121 RFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 166
>gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
Length = 327
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 91/235 (38%), Gaps = 10/235 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
+ +++ + I + + M ++ L Y + GK++R V A
Sbjct: 1 MAKIIEQIKEPIAQEMAAFEDKFRDSMSSRVA-LLNRITHYIVNRKGKQMRPMFVFLVAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + A ++ +D+ RRG +++ + A++ G+ L
Sbjct: 60 LVSEGLVQERTYRGAAVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ + I S + ++ LQ ++ ++ + + I +
Sbjct: 120 LSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQMEKARRLDITEEVYYE------IIRQ 173
Query: 184 KTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
KT L+ C GA +A + E++R FGE +G+ FQ+ DDL D E+ K
Sbjct: 174 KTATLIAACCAMGACSVAPENSQVIEQMRLFGEYVGMAFQIKDDLFDYTEEAIGK 228
>gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 334
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 11/237 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ + D +L ++++ L S + GGK++R +V +
Sbjct: 2 NIHKQIGVDLASFDRLLREVVISDRDLSPPSV--VLESVVNLINSGGKRLRPLMVMLGSR 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F V+ + + A+ + + +D +RRG PT+H D TA+ GN +
Sbjct: 60 -FGVSGHESAVMKTAVLLEYLHMASLVHDDIIDQSDMRRGMPTLHETTDVQTAVHIGNYM 118
Query: 124 LTYAFEIISSPKTQLKD--------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ A E + + D +L L Q+ + +
Sbjct: 119 IARAIEWAAGHPGEESDGASEAVSEEDAYRLAELAALVTELCMGEYDQLHHRFNYDLTME 178
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q + KT LM ++GA A A E L FGE LG+ FQ+ DDLLD +
Sbjct: 179 QYLEKTRCKTALLMAHCLKAGAEAAKADARTAELLFQFGEALGMAFQIRDDLLDFTQ 235
>gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
Length = 359
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 75/248 (30%), Gaps = 20/248 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSFLVTECASL 64
+L + + L L Q + + + L GGK++R
Sbjct: 6 ELADIPGAVREELATFLDQRREQVAAIGAPVTKAVSFLESFVLDGGKRVRPTYAWAGYLA 65
Query: 65 FN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAIIA 119
+ + LR A++E I +LIHDD+ N V + E +
Sbjct: 66 AGRGEEDPVAMLRAAASLEFIQACALIHDDIIDASNTRRGNPTVHRGVEKLHRESEYLGD 125
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
T ++ +++ LS + G ++ + + +
Sbjct: 126 PEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRARSPWRGMRTEVIGGQLLDISLEA 185
Query: 180 I------------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA A AS+ R +G ++GI +QL DD
Sbjct: 186 AGSESVELANSVNRYKTAAYTIERPLHLGAATAGASEELIAAFRGYGHDIGIAYQLRDDQ 245
Query: 228 LDCEEDLP 235
L D
Sbjct: 246 LGVFGDPA 253
>gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
Length = 327
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 15/235 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
N L S ++ ++++ ++ L + + GGKK+R +
Sbjct: 8 NITLNSDQHDHLQKVNDVIRSSLDSEVPLINQVGKHIIDG-------GGKKMRPQCLINL 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L ++ A +E IH +L+HDD+ +D+ RR PT +IQ+ +I+ G+
Sbjct: 61 AGLAGGVKDIHYQLAAIVEFIHTATLLHDDV--VDDSDTRRSSPTANIQFGNSASILVGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+ + +F+++ +I + + LQ + QD + +
Sbjct: 119 FIYSRSFQMMVELDNIEIMDILAYTTNKIAEGEVLQLINKNNFDISQDNYFK------VI 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
K KTG L + I + N+K L G+ G I+QL DD+LD D+ K
Sbjct: 173 KAKTGVLFEACGKLACIANKCTLNQKTSLSLIGKIFGEIYQLIDDVLDYSGDVAK 227
>gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1]
Length = 309
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 8/188 (4%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK++R + C+ L AAI ++ +D +RRG+PT
Sbjct: 26 AGGKRMRPLITLLCSRLCKDEQSKDAMHLAAITE-MLHTATLVHDDVIDESGMRRGRPTA 84
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ +D TA++ G+ L+ AF ++ ++ + S + LQ
Sbjct: 85 NATWDNPTAVLVGDYLIARAFNLLVGFQSLPLLQLFSDGTCDIAEGEVLQLQHQ------ 138
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ET I KT L A AI+ + FG++ G FQ+ DD+
Sbjct: 139 HNPEATETDYMNIIDGKTSRLFMMATAGVAIL-QDKPEFMQPFSDFGQHFGNAFQIIDDV 197
Query: 228 LDCEEDLP 235
LD D
Sbjct: 198 LDYSGDSE 205
>gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus
vaginalis ATCC 51170]
gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus
vaginalis ATCC 51170]
Length = 333
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 14/243 (5%)
Query: 1 MNGGLPSKLQENSKR--IDTILDDLLLQTASHMQTQHND-RLLSAIRYAL-LGGKKIRSF 56
MN + L + SK+ ID ++D L++ + +L + I L GK IR+
Sbjct: 1 MNFAISECLAKESKQTIIDYLIDKTLVEMREILGDYKQSQKLYNIIENTLISSGKMIRTK 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ + L N ++ + + +D+ IRR ++ +Y + A
Sbjct: 61 LLIYIS-LMGENQISDKIISQCAAVEITHLASLIHDDIIDDSLIRRSHRSIQSKYGKDVA 119
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ AG+ +++ F ++ + +I S + + + Q ++ ++ + E+ +
Sbjct: 120 VFAGDYMISKVFSYLAKKGLVEEISIISDTIRDMCNGEVGQNLIKYRLDISEKEYFEN-- 177
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
KT + C GA A +Q + ++ FG+NLG++FQL DD+LD +
Sbjct: 178 ----ICGKTASFFKTVCYFGAKNAGFNQIDINKMVEFGKNLGLMFQLKDDILDLFSSKDE 233
Query: 234 LPK 236
K
Sbjct: 234 TGK 236
>gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977]
gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus]
Length = 314
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 21/211 (9%)
Query: 47 LLGGKKIRSFLVTECASLFNVNHLTALR--------------VGAAIECIHCYSLIHDDL 92
L GGK++R + + + S
Sbjct: 2 LRGGKRLRPAFAYWGWRAITDDPDPWNPEVLRVCAALELLHTCALIHDDVIDSSATRRGE 61
Query: 93 PSMDNGYIRRGKPTVHIQYDE----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
P++ + + E AI+ G+ LT+A +++ + + ++R++ +
Sbjct: 62 PTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVRARGVW 121
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
S+ + L G + + + ET + +I+ G + + G +A +
Sbjct: 122 SILRSEVLGGQYLDILSESSGDESVETALRVIRFKTAGYTVQRPLQLGVAIAGENAEISR 181
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
L G ++GI FQL DD+L D K
Sbjct: 182 LLGDVGLDIGIAFQLRDDVLGVFGDPKVTGK 212
>gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100]
gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100]
Length = 282
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
++ L+ S + A+++ L GGK R+ L+ + N
Sbjct: 2 ILEKFKQHLEQNFPSIQSF-----HPFFNEALKWMLEAGGKHFRAQLLLGIVNTKNPALF 56
Query: 71 TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A+E IH YSLIHDDLP+MDN +RRGK T+H +YDE TAI+ G+ L T AF
Sbjct: 57 EKALNAALALEFIHTYSLIHDDLPAMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFL 116
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++S + ++ L+ +G + +D ++ QV + KT L+
Sbjct: 117 LLSKLDLKENIRLKLIETLAFNAGLGGMIIGQAIDCYFEDIPLNLEQVEFLHIHKTARLI 176
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + G + + E E++ G +G+IFQ+ DD++D D
Sbjct: 177 AAALKMGCEICELDEKECEQIYDIGLLIGLIFQIKDDIIDATLDT 221
>gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
Length = 326
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 13/225 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FN 66
++Q K + ++ + L ++ ++A GGK +R L A + N
Sbjct: 10 EIQNKLKDVQALMIERLKINNQEIEAALE-------KFASRGGKMVRPALFLLFAGIVPN 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A +S +D+ +RRG P++ Q+ + A+ AG+ + T
Sbjct: 63 GSKDEEKIIKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++ ++ + L M D+ + KT
Sbjct: 123 YFELLIETMNGTSFVAKNAQSMKKILQGELTQMQS-----AFDKNNTARRYMKAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ +C G A + + R G +G+ FQ+ DD+L+
Sbjct: 178 ELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222
>gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae
2603V/R]
gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae
COH1]
gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae
2603V/R]
gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae
18RS21]
gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae
COH1]
Length = 326
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 81/231 (35%), Gaps = 15/231 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++N + ++ + + ++ +L +A GGK++R + L N
Sbjct: 10 ELKKNIDETNQLIQERIQVRNKDIEAAL-SQLTAA------GGKQLRPAFFYLFSQLGNK 62
Query: 68 NHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ ++ + + +D+ +RRG T+ ++ + A+ G+ L T
Sbjct: 63 ENQDTQQLKKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
F++I + + L M KT
Sbjct: 123 FFDLILESMADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHY-----LRAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
L A + GA A + G N+G+ FQ+ DD+LD D KK
Sbjct: 178 ELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226
>gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
Length = 332
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + + ++ ++++ ++ L + Q + ++ A GGK++R L+ A
Sbjct: 14 AQLLAPIVDDMEQVNRVIRHSLSSDVLLIN-QIAEYIIGA------GGKRLRPALLLLVA 66
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+
Sbjct: 67 GALGDGSSHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + +FE++ I S+ ++ LQ + D +DE++ + +
Sbjct: 125 LYSRSFEMMVGVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDESRYMQVIR 178
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L + GA++A A + + +G +G FQ+ DD LD
Sbjct: 179 YKTAKLFEASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 231
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
S + E + R++ LDD + + ++ A+RY+LL GGK++R L
Sbjct: 79 FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++AG+
Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191
Query: 122 GLLTYAFEIIS 132
LL +AFE I+
Sbjct: 192 ALLAFAFEHIA 202
>gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402]
Length = 344
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASH-------------MQTQHNDRLLSAIRYAL-LGGKKI 53
+L+ + I+ LD L + + + +++ +R + GGK+
Sbjct: 3 ELKNRLEHIEKTLDCFLPEKINSSWISQSFGELAYGLPDSFFLNIINPVRDLVKRGGKRW 62
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R L L + A + IE H SL+HDD+ D RRG P HI+Y
Sbjct: 63 RPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAHIKYGL 120
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-MLDIQDEFI 172
TA+ + + L A + + + + S G D
Sbjct: 121 DTALNSASWLYFEALNPLINYEASESVRAEIYSLYSQNLRRLHLGQSMDIGWHSNPDIIP 180
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE- 231
+ + +KTG+L A E G I A NE ++GI FQ+ DD+ +
Sbjct: 181 SVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQILDDVKNITE 240
Query: 232 EDLPKK 237
+ K+
Sbjct: 241 GNAGKR 246
>gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 285
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 11/223 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
K+ + K D L D L + S I Y L GGK++R +L+ +
Sbjct: 7 KINDFRKEFDKFLRDHLERL------MVCSSFSSIINYTPLTGGKRLRPYLIALFSQAIG 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +++G A+E H SLIHDDLP++DN RRGKP++H +DE +AI+AG+ L+ Y
Sbjct: 61 LPSELYMKLGVAVELFHSGSLIHDDLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLY 120
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+++ T ++G + + V I ++KT
Sbjct: 121 PVKVLQELTINEHLKFLLINEWIRTALSIIEGEYLDVTYEP---SSNTKDVNRIHRLKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
L F S I A + ++++ G G IFQ+ DD+ D
Sbjct: 178 ELFGFCFSSPFICADRMEE-AKKMKETGLRFGHIFQVLDDIKD 219
>gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 436
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 88/249 (35%), Gaps = 23/249 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECAS 63
S L + ++ + + + + H L + RY GGKK+R +V +
Sbjct: 99 SSNLADPFTLVEQDMVSVNHSIKRILGSDHP-VLAAVARYFFEHDGGKKVRPTMVLLVSR 157
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVH 108
+ + +D RRG+P+V+
Sbjct: 158 AAEAHRRATDTPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVN 217
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ A++AG+ LL + +++ + + S + L +Q DI
Sbjct: 218 KVFGGKMAVLAGDFLLARSSVLLARLRNLEAVELMSTSIEHLVKGEVMQMKNADARDDIS 277
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
KTG+LM +C++ + Q+ + FG ++G+ FQL DD+L
Sbjct: 278 PFEYY----LRKNYYKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLIDDVL 333
Query: 229 DCEE-DLPK 236
D E + K
Sbjct: 334 DYEGVETGK 342
>gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
Length = 324
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I L+D S + + + GK +R LV A L+N
Sbjct: 3 SISLIKSPISAELEDFKKHFDSCLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLYNE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L A+E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL A
Sbjct: 63 ICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLTGDYLLATA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + ++ S L L LQ ++ + E F + + KT
Sbjct: 121 LVEVGMTRNYAIIDVVSNLGQDLAEGELLQL------SNVSNPEYSEDIYFDVIRKKTAV 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
L ++GA+ AS + E R FGE +G+ FQ+ DD+ D E ++ K
Sbjct: 175 LFAACMKAGALSVGASDEKAEYARLFGEYIGLCFQIKDDIFDYYESKEIGK 225
>gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 20/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +L E KR++ +T + I GGK +R +
Sbjct: 11 PALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A ++ +D +RRG+P + Q+ V ++ AG+
Sbjct: 60 Q-FGPEQDRDKAIALAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+++S T LK + + N GQM D + + +
Sbjct: 119 LFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNG-----ELGQMDDRYNYELSVKEYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
KT L +C GA + S+ ++ G ++G+ FQ+ DD+LD +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230
>gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 424
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 7/195 (3%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK+ R L A FN+ + + E +H +L+ DD+ DN +RR K V
Sbjct: 129 RGGKRWRPILCIILAEAFNLGQEDVKEIASLCEIVHNGTLVVDDIE--DNSTVRRDKKCV 186
Query: 108 HIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
H+ Y +I AGN + I+ S+ T + +++ + L
Sbjct: 187 HLIYGVDISINAGNMMYFAPLHILLKSNKYTDQQKLRFAKIYAEEMTQLHLGQGWDILWH 246
Query: 166 DIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ E Q + KTG L + + S ++ + F E +G+ FQ
Sbjct: 247 NTDKLEGRIPTEQQYLQMTAHKTGVLARLSSRLICAAVNTSVEDEMTISRFSERIGVAFQ 306
Query: 223 LADDLLDCEEDLPKK 237
+ DD+L+ E + KK
Sbjct: 307 IQDDILNLEGEEYKK 321
>gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
Length = 323
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 17 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 72
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 73 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 132
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 133 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 187
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 188 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 218
>gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712]
gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712]
gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX1322]
gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
TX0104]
gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
ATCC 29200]
gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
Length = 326
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L + + + D + M+++ L + Y + GK++R V A L
Sbjct: 5 RLDDIRNVVKDDMKDFEKKFRDSMKSKVM-LLDKIMSYIVKRNGKQMRPMFVFLSAHLAG 63
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + R A IE +H +L+HDD +D+ RRG +++ + A++ G+ LL+
Sbjct: 64 NVNDSTQRGAALIELLHTATLVHDD--VVDDSDYRRGMFSINALWKNKIAVLVGDYLLSK 121
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + I S + ++ LQ + ++ + + I + KT
Sbjct: 122 GLLLSINHGDFHLLKIVSNAVREMSEGELLQIEKARNLNINEEIYFE------IIRQKTA 175
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+L+ C G A + ER + FGE +G+ FQ+ DDL D E
Sbjct: 176 SLIASCCAVGVSSTGADEALVERAKMFGEKIGMAFQVKDDLFDYE 220
>gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
Length = 309
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++++ ++ L + Q + ++ A GGK++R L+ A N
Sbjct: 1 MEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVAGALGENTNQK 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 54 HVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I S+ ++ LQ + D +DE + + + KT L A
Sbjct: 112 GVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIRYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A A + +G +G FQ+ DD LD
Sbjct: 166 ARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAGTAE 208
>gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
TX1330]
gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
TX1330]
gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 17/229 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +L E KR++ +T + I GGK +R +
Sbjct: 11 PALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A ++ +D +RRG+P + Q+ V ++ AG+
Sbjct: 60 Q-FGPEQDRDKAIALAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+++S T LK + + N GQM D + + +
Sbjct: 119 LFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNG-----ELGQMDDRYNYELSVKEYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT L +C GA + S+ ++ G ++G+ FQ+ DD+LD
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYT 222
>gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 289
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
+RI+ LD + + L A+RYA+ GG +IR L A +
Sbjct: 5 QRIEMALDRAVAHAEA---PGAPPLLAEALRYAVFPGGHRIRPRLCLSVARACGDDDPAG 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
++ AAIE +HC SL+HDDLP D+ +RR KP+VH+ + E A++ G+ L+ AFE +
Sbjct: 62 SVAAAAAIEFLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + L G+ GQ + + +
Sbjct: 122 ARSVGRHPARLGRLVGLLGRAAGSPSGIAAGQAWES-------EAHISLSDYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ E E R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAAAAGAEPEPWRRLGECLGEAYQVADDLRDV 213
>gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecium DO]
gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162]
gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071]
gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636]
gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679]
gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317]
gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082]
gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071]
gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636]
gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679]
gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317]
gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162]
gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 17/229 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +L E KR++ +T + I GGK +R +
Sbjct: 11 PALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + A ++ +D +RRG+P + Q+ V ++ AG+
Sbjct: 60 Q-FGPEQDRDKAIALAASIEMLHTATLIHDDIVDEADLRRGQPNIRSQFGNVVSVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+++S T LK + + N GQM D + + +
Sbjct: 119 LFVCCFKLLSDYSTSLKSLQLNSRSMEKVLNG-----ELGQMDDRYNYELSVKEYLENIS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT L +C GA + S+ ++ G ++G+ FQ+ DD+LD
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYT 222
>gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative
[Enterococcus faecalis V583]
gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 372
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 72/260 (27%), Gaps = 38/260 (14%)
Query: 14 KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLF---NVN 68
I + LD L AS + + + + R L GGK+ R+ +
Sbjct: 9 DLIQSRLDGFLDARASILVSIAEELSPIAEFSRDFLSGGKRFRALFCFWGWQAVRTSGED 68
Query: 69 HLTALRVGAAIECIH---------CYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEV 114
++ +DN RRG P+VH E
Sbjct: 69 ATDETVTAGGPLDAVVSVASALELFHAAALVHDDLIDNSDTRRGAPSVHRRFESLHDSEK 128
Query: 115 TAIIAGNG-------------------LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ + + +S + +++ + +T
Sbjct: 129 WSGCGKSFGTGAATLLGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQY 188
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
L D +I + GA +A A+ + + L FG
Sbjct: 189 LDLFEEIGWAGRHDADQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFGL 248
Query: 216 NLGIIFQLADDLLDCEEDLP 235
LGI +QL DDLL D
Sbjct: 249 PLGIAYQLRDDLLGVFGDAA 268
>gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
Length = 327
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 18/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + ++E + + + + + + Y + GK++R V
Sbjct: 3 ITAQIKEPIREEMELFEQKFRNSMSSKVALLNRITY--------YIVNRKGKQMRPMFVF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIH-CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + + + R I ++ +D+ RRG +++ + A++
Sbjct: 55 LVAKMLSDDSKVSERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVL 114
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL+ + I S + ++ LQ ++ ++D + +
Sbjct: 115 VGDYLLSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIVEDVYYE----- 169
Query: 179 MIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA E++R FGE +G+ FQ+ DDL D ED K
Sbjct: 170 -IIRQKTATLIAACCAMGACSVQPEQPELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 228
>gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
Length = 328
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGKIGENIGLAFQIIDDILDYTQ 223
>gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
Length = 337
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ ++++ ++ L + S++ + + R+ + GGK++R L A +F
Sbjct: 26 DMEKVNELI---LSKAGSNV-----ELIPEIARHLIDSGGKRLRPMLTLAFAQMFGYEGE 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ + A++E +H +L+HDD+ +D +RRGK + +++ G+ LL AF++
Sbjct: 78 GHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKM 135
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ ++ I S+ + LQ D + + + KT AL
Sbjct: 136 MVDVRSLEALRILSEASAIIAEGEVLQLGAAQDTTTTYDMY------LRVIEAKTAALFA 189
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
ACE +A + R FG LG FQL DD LD DL K
Sbjct: 190 AACEVSPEIADKGDEMRAAARKFGLELGYAFQLVDDALDYGGATVDLGK 238
>gi|147901253|ref|NP_001084626.1| hypothetical protein LOC414582 [Xenopus laevis]
gi|46249832|gb|AAH68912.1| MGC83119 protein [Xenopus laevis]
Length = 348
Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 74/252 (29%), Gaps = 16/252 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
M + S+ QE S + I++DL + + H + RL ++Y LGGK R V
Sbjct: 1 MKSQVSSERQEFSSYFEQIVEDLAAEDSGHPEVGDAIGRLKEVLQYNTLGGKCNRGVTVL 60
Query: 60 ECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
++ L+ A+ + + E
Sbjct: 61 ASYRELLGPELHKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRGQPCWYRKEGIG 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQ 168
+ A N I + + +L L Q +
Sbjct: 121 LDAVNDSFLLEACIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKVDL 180
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDL 227
+ + ++ +++ + MA + E + + +G FQ+ DD
Sbjct: 181 NRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIDGEEEHKNAKTILLEMGEFFQIQDDY 240
Query: 228 LDCEED---LPK 236
LDC D K
Sbjct: 241 LDCYGDPSVTGK 252
>gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
Length = 325
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+ + I++ L+D + + + + L + + GK++R L+ A +
Sbjct: 3 YVSTIKQPINSELNDFIALFDESL-SHTDGLLSQVLDHVRQRAGKRMRPILILLMAKNYG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
T L +E +H SL+HDD+ +D RRG+ +V+ +Y+ A++AG+ +L+
Sbjct: 62 QITSTTLNAAVGLELLHTASLMHDDV--VDESEERRGQASVNAEYNNKVAVLAGDYVLST 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A ++ + ++L +L++ LQ IQ++ I ET + + KT
Sbjct: 120 ALLHVNFTHNEAIIETLAELGRTLSNGEILQL------SAIQNQSISETTYYDVISQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
AL E GA+ A A + R FG N+GIIFQ+ DD+ D
Sbjct: 174 ALFEACAEVGALSAGADAAATTQARNFGRNIGIIFQIRDDIFDYY 218
>gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 317
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPT 106
L GK +R L+ CA L + ++ + L +DN RRGK +
Sbjct: 31 LSGKMLRPKLLLLCAFLGSNWKNNREKICKLAAMVELTHLASLIHDDIVDNSPYRRGKTS 90
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+ +Y + A+ AG+ L++ F + ++ S+ + + Q + +
Sbjct: 91 LQGKYGKDAAVFAGDFLISRIFHYGTEENLNEAVSVLSKTVEYMCIGEIEQDL------N 144
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
E I E + F I + KT AL AC GA A S+ ++L F +NLG++FQL DD
Sbjct: 145 RYREDISEKKYFEIIENKTAALFQVACHIGAKEAGCSEENIKKLELFVKNLGLMFQLKDD 204
Query: 227 LLDCEE---DLPKK 237
+LD DL K+
Sbjct: 205 ILDFTSNSKDLGKE 218
>gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG]
gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG]
gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
Length = 328
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 76/211 (36%), Gaps = 9/211 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ Q + + I GGK +R + F A
Sbjct: 22 RLMEQAVQIDNQEIQAAVHDMIH---SGGKLLRPAYQLLFS-YFGEQRDPKKATALAASI 77
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ +D RRG PT+ ++ TA+ G+ L F+++S + LK
Sbjct: 78 ELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSI 137
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQM + + + Q KT L +C GA +
Sbjct: 138 QLNSRSMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESG 192
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
SQ +R GEN+G+ FQ+ DD+LD +
Sbjct: 193 TSQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223
>gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
Length = 321
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 15/229 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E K ++ ++ DL+ + A + I GK IR A
Sbjct: 10 EIKKELEVVI-DLMDENAYCKDKVIESSIKDMIH---SNGKMIRPGFSIIAAKFGEYEEE 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A +E H +L+HDD+ +D+ +RRGK TV +Y + A+ G+ L F++
Sbjct: 66 RTRVLAAVMEFFHMATLVHDDV--IDDAKLRRGKETVQSKYGKDYAVYIGDYLFCICFKL 123
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S + I S+ M + Q ++ KT L
Sbjct: 124 LASTASLQSIQIDSKAMSRICLGEVEQLNSRFDKNVSVKNYLKR------VSGKTAELFS 177
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ GA ++ + G N+G+ FQ+ DD+LD D L K
Sbjct: 178 LSLYIGAAESNCDKKLSRLFWNIGHNIGMAFQIIDDILDYVSDTNTLGK 226
>gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
Length = 375
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/254 (17%), Positives = 77/254 (30%), Gaps = 24/254 (9%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLVTECASL 64
+++ + T L D L + L + + GGK++R
Sbjct: 22 AEIDRVRAAVSTALTDFLHVQRQTLAAMDESLLPVVDEVCALADGGKRLRPLFAYWGWRG 81
Query: 65 -----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA--- 116
+ LR AA+E +H +L+HDD+ R V
Sbjct: 82 VRGERPGESDAAVLRAVAALEFVHASALVHDDVMDGALTRRGRPATHVGFAARHGDGELA 141
Query: 117 -----------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
I+ G+ L ++ E++ R++ + G +
Sbjct: 142 GDGDTFGIGAAILVGDLALVWSDELLRRSGISTAALSRARTVWDTMRTEVTAGQYLDLLR 201
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + + + G + + GA +A A E G LG FQL D
Sbjct: 202 AAGGLPGAQGALTVARYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQLRD 261
Query: 226 DLLDCEED---LPK 236
D+L D K
Sbjct: 262 DVLGVFGDPTVTGK 275
>gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
Length = 318
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 15/230 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + K + + L AS + L ++++ GK +R +V CA L
Sbjct: 4 IADFIKEFEQVFKRSLQSDASVL-----SHALEHLQHSS--GKHVRPIIVGLCAQLCAGQ 56
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + + + + +D RRG+PT++ Y A++ G+ +L+ AF
Sbjct: 57 TNERTLAAALVIELLHTASLI-HDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAF 115
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I S + + L + + E + + KTG L
Sbjct: 116 LEIVSREHNQEMLRVVAQAGRNLSIGELMQLSLSKAHT-----YREEDYYAVVDRKTGTL 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
+ + GA+ +A+ E ER G+ +G FQL DDL D + +D+ K
Sbjct: 171 FEASAKLGALSVNATDEEVERCARLGQLMGRAFQLQDDLFDYDKLQDVGK 220
>gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 318
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 9/223 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+R++ ++ + +++ +++ + + GGK++R +V + + +
Sbjct: 6 QRLNNDIEKVEENLRTNVTSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRLI 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ +AIE +H +L+HDD+ +D RR + TV+ +Y AI G+ L T A +++
Sbjct: 66 KLASAIELLHTATLVHDDV--LDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLAD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
I ++ + ++ Q D + KT L +C
Sbjct: 124 IVPAKHLTIAAKAVKTICEGE------VDQYRDKYVMNLSVPSYLKRISRKTAVLFGASC 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLP 235
GA+ A + + L G G++FQ+ DD D + D
Sbjct: 178 ALGALCAKCNHSITNSLSKLGFYYGVMFQMIDDYRDYKSGDSE 220
>gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 362
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 25/251 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + ++ + + L + + + LL+A A GGK++R+ L
Sbjct: 8 ERDRALVEQCVGESLDAAGAAYASIGPESLPLLAAAAQAATGGKRLRALLCCAAWEAAGG 67
Query: 68 NHLT--------------ALRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHI 109
+ + + S + P+ + + G
Sbjct: 68 AVPSAGDPVVLAGAALELFQAAALVHDDVMDASDVRRGAPAAHRRLAAEHRAAGLLGDAD 127
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ E AI+ G+ LL + + + ++ H G + +
Sbjct: 128 RFGEAGAILLGDLLLMLSSSTFARAVRLVPLERAARADEVYAHMSGEVTLGQYLDVYAAL 187
Query: 170 EFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
D +I+ + GA +A A + G +G FQL
Sbjct: 188 APWDPAGDADRARRVIEAKAARYSVEHPLVLGAALAGADDDVLAWCSRVGLPVGTAFQLR 247
Query: 225 DDLLDCEEDLP 235
DD+L D
Sbjct: 248 DDVLGVFGDPA 258
>gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
[Taeniopygia guttata]
Length = 677
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L +L + + L Y G GK R +V A N++H + V
Sbjct: 363 KDLKNLYEDIKKELLVSAAE-LKEMCDYYFDGKGKAFRPMIVVLMARACNIHHNNSKEVQ 421
Query: 77 AAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ + ++ +D+ RRGK T++ + E A++AG+ +L+ A +
Sbjct: 422 ASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKRTLNQIWGERKAVLAGDFILSAASVAL 481
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +Q++ L LQ ++E KT +L+
Sbjct: 482 ARIGNTTIVSVLTQVIEDLVRGEFLQL------GSKENENERFAHYLEKTFKKTASLIAN 535
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
+C++ +I+ E +G+N+GI FQL DD+LD D L K
Sbjct: 536 SCKAVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGK 583
>gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 362
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 87/257 (33%), Gaps = 23/257 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M+ PS + E + + L + L + S ++ + + + L GGK++R
Sbjct: 1 MDTAAPSAV-ELAGAVTEQLREYLRERRSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAF 59
Query: 58 VTECASLF--------NVNHLTAL-------RVGAAIECIHCYSLIHDDLPSM----DNG 98
+ L + + S LP++
Sbjct: 60 AYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDVIDDSATRRGLPTVHRLFTEQ 119
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+ RG Q+ AI+AG+ L++A +I++ + + R Q + L G
Sbjct: 120 HHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRRVQTVWRHIRTEVLGG 179
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + + + + + + + GA A + +E G +LG
Sbjct: 180 QYLDIVTESSGDESVASALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHRIGNDLG 239
Query: 219 IIFQLADDLLDCEEDLP 235
+ FQL DD+L D
Sbjct: 240 VAFQLRDDVLGVFGDPA 256
>gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11]
gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 326
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 13/225 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FN 66
++Q K + ++ + L ++ ++A GGK +R L A + N
Sbjct: 10 EIQNKLKDVQALMIERLKINNQEIEVALQ-------KFASRGGKMVRPALFLLFAGIVPN 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A +S +D+ +RRG P+V Q+ + A+ AG+ + T
Sbjct: 63 GSKDEEKLIKIAASLEMLHSATLIHDDIIDDSPLRRGMPSVESQFGKDVAVYAGDFVYTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++ ++ + L M D+ + KT
Sbjct: 123 YFELLIETMNGTSFVAKNAQSMKRILQGELTQMQ-----SAFDKNNTARRYMKAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ +C G A + + R G +G+ FQ+ DD+L+
Sbjct: 178 ELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222
>gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5]
Length = 297
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT- 71
K I+ L + + L A+ A+ GG ++R L + + + H
Sbjct: 15 KLIEQALR---AAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKHPEL 71
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A R AAIE +HC SL+HDDLP DN +RRG+PTVH + E A++AG+ L+ AF+ +
Sbjct: 72 ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLAGDALIVMAFKYL 131
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + + G++ GQ ++ + KTG+L
Sbjct: 132 SLQAALTPELGGRMIEVVAEAVGPSHGLIAGQSMEAMTH----VAIDRYHHYKTGSLFVA 187
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA+++ A GE LG +Q+ADD+ D
Sbjct: 188 AATCGALVSGADP---APWSKVGELLGHAYQIADDIADTVG 225
>gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
Length = 344
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 73/221 (33%), Gaps = 9/221 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+ I L + L+ H + D L Y GGK +R L A L
Sbjct: 6 ETIRQALQERLIARLDHTDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A+E + L+HDD+ D RRG+P +H + A+ AG+ + + +++
Sbjct: 63 ETATALELFQNWVLVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCF 191
+ L G + + F + M+
Sbjct: 121 GLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAVYYTAVV 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G ++ + G LG FQ+ DD+L+ E
Sbjct: 181 PLRLGVLLVGKTPP--AAYEEGGLRLGTAFQIVDDVLNLEG 219
>gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 326
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 13/225 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FN 66
++Q K + ++ + L ++ ++A GGK +R L A + N
Sbjct: 10 EIQNKLKDVQALMIERLKINNQEIEAALE-------KFASRGGKMVRPALFLLFAGIVPN 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A +S +D+ +RRG P++ Q+ + A+ AG+ + T
Sbjct: 63 GSKDEEKLIKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++ ++ + L M D+ + KT
Sbjct: 123 YFELLIETMNGTSFVAKNAQSMKKILQGELTQMQS-----AFDKNNTARRYMKAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ +C G A + + R G +G+ FQ+ DD+L+
Sbjct: 178 ELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222
>gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95]
gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95]
Length = 288
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL E D + + D L + Y + GGK++R +++ + +
Sbjct: 5 KLLEFKDFFDKKIKNFFENLD------LEDYLKEPLFYYIENGGKRLRPWIIYNFGQIIS 58
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+N + + A+E +H SLIHDDLP++DN +RRG T H+++ E AI+AG+ T
Sbjct: 59 INKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRGALTTHLKFGEYKAILAGDYGFTL 118
Query: 127 AFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+I++ + + + T QG + + + +D+ + E ++ + KT
Sbjct: 119 PLQIVAGLDNIKEGNKLLLVDYFIKTILKLFQGEMEDLIFEKEDKNVGEKEILEMYSKKT 178
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
GA+ F S +MA + + G + G+ FQ+ DDL D ED+ K+
Sbjct: 179 GAVFGFCFASPFLMAG-EAELAKEMNKIGTDFGVSFQIFDDLKDIFTKEEDIGKE 232
>gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56]
Length = 326
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 13/225 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FN 66
++Q K + ++ + L ++ ++A GGK +R L A + N
Sbjct: 10 EIQNKLKDVQALMIERLKINNQEIEAALE-------KFASRGGKMVRPALFLLFAGIVPN 62
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + A +S +D+ +RRG P++ Q+ + A+ AG+ + T
Sbjct: 63 GSKDEEKLIKIAASLEMLHSATLIHDDIIDDSPLRRGLPSIESQFGKDVAVYAGDFVYTV 122
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
FE++ ++ + L M D+ + KT
Sbjct: 123 YFELLIETMNGTSFVAKNAQSMKKILQGELTQMQS-----AFDKNNTARRYMKAISGKTA 177
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L+ +C G A + + R G +G+ FQ+ DD+L+
Sbjct: 178 ELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222
>gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative
[Carnobacterium sp. AT7]
gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative
[Carnobacterium sp. AT7]
Length = 326
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 80/228 (35%), Gaps = 17/228 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S+L + + +D+ + L+ + GGK +R +
Sbjct: 11 PELQSELMQTIELMDSRIH--------LRNKSIEHALMDMMH---TGGKLVRPAFTLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F +H A + +D+ RRG+ T+ +Y + A+ AG+
Sbjct: 60 -TFGEDHDPRRARAFAAAIEILHMATLIHDDVIDDSPKRRGQSTIQSKYGKDVAVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T +F++++ +K + + + M I
Sbjct: 119 LFTVSFKLLTDYSNSMKQMQINTNGMERILMGEIDQMHLRYNQKITVRNYLTQ-----IS 173
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L AC SGA+ S+ G ++G+ FQ+ DD+LD
Sbjct: 174 GKTAQLFALACYSGALEGGQSERFARNCYYIGSHIGMAFQIMDDILDY 221
>gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae]
Length = 376
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 20/238 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
L S R+ ++DD++ + + + L + GGK++R L A +
Sbjct: 55 LSRVSDRVSFVIDDVVSSFSGRLPLLASVSKLLFES------GGKRLRPSLCLLMAGALS 108
Query: 67 VNHLTALRVGAAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
++ + + +D RR PT ++Q+ + +I+ G+
Sbjct: 109 PARRDPSAAIGPVDKVAQISEMIHVASLLHDDVLDGATTRRNTPTANVQFGDKASILGGD 168
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL+ + I++S + ++ + ++ L +Q + +++
Sbjct: 169 FLLSRSSIILASLGSCEAVSLMATIISDLVSGEIMQM----RPMNVGSLSDRLEYYLSKS 224
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +LM +C + A++ S + + FG+ LG+ FQL DDLLD L K
Sbjct: 225 YRKTASLMANSCRTVAVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLDITGTDKSLGK 282
>gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
Length = 288
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
RI +D+L+ +Q + + Y GGK+IR ++ + + T++
Sbjct: 11 RITDAMDELIENMDD--SSQIKNVVSHVCNY---GGKRIRPIILMLSTDICGGDSKTSIN 65
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E +H SLIHDDL +D+G IRRG P+ H ++ A++ G+ L++ + E++SS
Sbjct: 66 AALAVELMHSASLIHDDL--IDDGIIRRGVPSAHKKFGHSAAMLCGDFLISKSIELMSSY 123
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
M G +++ KT +L
Sbjct: 124 GHNAITEFGQAGMSMAHGETIDLGGDDAGFVEVNYFDC--------IYKKTASLFAACAS 175
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
GA ++ A R R +GE +G +Q+ DDLL+
Sbjct: 176 IGAYISGADDEMVHRCRLYGEYMGTAYQIVDDLLEY 211
>gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
Length = 368
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 84/246 (34%), Gaps = 23/246 (9%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV--- 67
+R+ +D + + + + +D L+ ++ L GGK +R+ +
Sbjct: 11 RRRVQQAIDAHIQGSRAALAEIGDDIAPLVDSVSRLLSGGKGLRASFLYWGYRAAGAADS 70
Query: 68 --------NHLTALRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHIQYDEVT 115
+ + + S +PS + + + RG ++ E
Sbjct: 71 DALVRLSASMEFFQAAALLHDDVMDRSDTRRGMPSAHRAVADLHRSRGWAGDDARFGEGA 130
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+AG+ LT+ E+ S+ +D R + L + G + + +
Sbjct: 131 AILAGDLCLTWCDELFSTCGLPAEDLARGRGAFDLMRTQLMGGQFLDLLESARGWDGLDL 190
Query: 176 QVFM------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + I+ + GA + A + L +G LG FQL DDLL
Sbjct: 191 EARIASARNVIRYKSAKYTIEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDLLG 250
Query: 230 CEEDLP 235
D
Sbjct: 251 VYGDPE 256
>gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 346
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 5/186 (2%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR LV A AL A+E +H +SL+HDD+ MD RR +PT
Sbjct: 62 GKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDV--MDGDATRRHRPTAWA 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ A++AG+ L+T A ++++ L ++ + Q G +
Sbjct: 120 VFGVNAAVLAGDALMTLALDVLAGSGHPAAARGIVLLSAAVQELLDGQSSDLGF---EER 176
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + + KT AL+ C GA+ S ++ L FGE G+ FQ DDLL
Sbjct: 177 DEVGVAECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDDLLG 236
Query: 230 CEEDLP 235
D
Sbjct: 237 IWGDPA 242
>gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct]
Length = 1798
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
T+L + + A L +A+ AL GK+ R L+ A T +
Sbjct: 335 TLLQTRIEEIAQGFGAVLQP-LGAAMA-ALSSGKRFRGMLMLLAAEASGGVCDTIVDAAC 392
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E +H SLI DDLP MD+ +RRG+P H+ + E A++ G L+T A +++ +
Sbjct: 393 AVEMVHAASLIFDDLPCMDDAGLRRGQPATHVAHGESRAVLGGIALITEAMALLAGAR-G 451
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+R+QL+ L+ ++G QG+ GQ LD+ Q +KTG L E A
Sbjct: 452 ASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNGAGVEQE-QDLKTGVLFIAGLEMLA 510
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ E+ ++ FG LG +FQ DDLL+ D L K
Sbjct: 511 VIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLEVVGDQAALGK 552
>gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
StLB037]
Length = 355
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 77/241 (31%), Gaps = 21/241 (8%)
Query: 16 IDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLTA 72
ID+ ++ L + + L SAIR A GGK+ R LV L +
Sbjct: 14 IDSAIEGALSRLDRRLGQHGDGARALASAIRRAAEGGKRFRPLLVVSAFDTLDGPDIARP 73
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT----VHIQYDEVTAIIAGNGLLTYAF 128
A ++ +D+ RRG P + E A AG LL A
Sbjct: 74 ALYQVAAAFELLHTAFVVHDDVIDHDVERRGMPNVGGEFRSRGTERGADAAGAALLGDAA 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------------MLGGQMLDIQDEFIDE 174
I++ + + T + + + +
Sbjct: 134 GILAGDLLLHEAARLVAMAEIPTDLRRELLLLVEDAVLVSAAGELADVENAVSAGDIDAD 193
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
T + E+GA++A A + L+ FG+ LG+ +QL DDL+
Sbjct: 194 TILRTTHDKTAVYSFSAPLEAGAVLAGAEAPVRHALQRFGQRLGLAYQLVDDLIGAFGSA 253
Query: 235 P 235
Sbjct: 254 A 254
>gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays]
gi|219884511|gb|ACL52630.1| unknown [Zea mays]
Length = 428
Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 33/256 (12%)
Query: 6 PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
S+ QE + + D+L L M +L SA Y GK+ R ++
Sbjct: 81 ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 140
Query: 61 CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
AS + E IH SL+HDD+ +D+ RRG
Sbjct: 141 MASALKFPLSESTEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 198
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
++++ +++AG+ LL+ A +++ ++ + + L +Q
Sbjct: 199 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGETMQI----- 253
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+++ KT +L+ +C++ AI+A + +G NLG+ FQL
Sbjct: 254 -STSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTTEVSVLAHEYGRNLGLAFQL 312
Query: 224 ADDLLDCEE---DLPK 236
DD+LD L K
Sbjct: 313 IDDVLDFTGTSASLGK 328
>gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
Length = 328
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 90/234 (38%), Gaps = 10/234 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
+ ++ I + + +Q L A+ + L GK IR +V CA L
Sbjct: 4 QEEREQLLVPIADFIKEFEQDFRQSLQCDAP-VLSHALEHLRLSSGKHIRPIIVGLCAQL 62
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A + + + + +D RRG+PT++ Y A++ G+ +L
Sbjct: 63 CAGQTNEQTLSAALVIELLHTASLI-HDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVL 121
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF + S + + L + + E + + K
Sbjct: 122 STAFLELVSREHTPEMLRVVAQAGRDLSIGELMQLSLSKAHT-----YREEDYYAVVDRK 176
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
TGAL + + GA+ A++ + +R G+ +G FQL DDL D ++ D+ K
Sbjct: 177 TGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFDYDKALDVGK 230
>gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
35098]
gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
35098]
Length = 275
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 15/238 (6%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN +L +N +D + + + A+ YAL GK+IR+ L
Sbjct: 1 MNDIDYRQRLVDNKNLLDDEIKTYIK---------GESLIEEAMLYALEAGKRIRASLFL 51
Query: 60 ECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
E L N L AIE I YSL+HDDLP+MD+ RRGK ++H + E I+
Sbjct: 52 ETRRLSRNQIDKNDLLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESLHKHFGEDLGIL 111
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ LL A +++ ++ I++ L + G + + ++ +
Sbjct: 112 TGDALLNEATKLMFEIASRDSSFIKASQYLLSKTGKDG-MIEGQILDLRRRRNYNKDFII 170
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL--DCEEDL 234
+ KT A +GA++ Q+ L + LG+ FQ+ DDLL D D
Sbjct: 171 EVYDKKTADFFKGAIVAGALVNGFDQDTINSLERYAYYLGLGFQIQDDLLEKDY-GDE 227
>gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa]
gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa]
Length = 370
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 100/253 (39%), Gaps = 26/253 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN---------DRLLSAIRYALL-GGK 51
+ LP +++ + + + + ++L++ A + + + +Y GGK
Sbjct: 20 STRLPGFVRDKLQALQSEIMEILVRNAENSSSLLSTCFSSSAFTKTFQEMAKYYFDQGGK 79
Query: 52 KIRSFLVTECASLF------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
R + A +T + A+ ++ +D
Sbjct: 80 LFRPTICLLMARACNQFEPKSMLVDSGRETVTRNQYKIAVISEMIHTASLVHDDVIDKAD 139
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
IRRG TV+ + A++ G+ +L A +++ S ++ + ++ L +Q
Sbjct: 140 IRRGSRTVNALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFMQMN 199
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
G + Q + + KT +L +C+S A+++ S+ ++ +G++LGI
Sbjct: 200 DGTDLNATQRFNKYMAKTYS----KTASLFANSCKSAAMLSDVSEADELSAYEYGKSLGI 255
Query: 220 IFQLADDLLDCEE 232
FQ+ DDLLD
Sbjct: 256 AFQMIDDLLDYVS 268
>gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae]
Length = 303
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ S I+ LD LL + D + +A+R AL GK+IR L+ A
Sbjct: 13 IHSDAASLLNDIEQRLDQLLPVESER------DLVGAAMRDGALAPGKRIRPLLLLLAAR 66
Query: 64 LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N A + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A
Sbjct: 67 DLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAV 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL+ AF ++++ + + + L+H +G+QG++ GQ D D+ + M
Sbjct: 127 ALLSKAFGVVAAAEGLTATAR-ADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILM 185
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L C + + +I+A AS +E+L F NLG FQL DDL D D K
Sbjct: 186 TNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242
>gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
Length = 328
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 2/212 (0%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I LD L + + + + + ++Y + GK+IR LV AL
Sbjct: 10 IRARLDKELTRQIPKLFSAFGPQQIKTVQYIINNGKRIRGCLVCLVNHALGGQIADALPR 69
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AIECI SLIHDD +DN IRR +P A++ G+ + A + +
Sbjct: 70 AVAIECIQAASLIHDDY--VDNDTIRRKRPATWTVEGPRRAVLLGDMMFATAIQSMVELS 127
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + +L + ++T I +KTGAL AC+
Sbjct: 128 NADGIAVTRAIATVANGAYQEPLLLAKPAAGRALDLNEQTIYERIIYLKTGALFGAACQL 187
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
GAI A A + FG G +Q+ADDL
Sbjct: 188 GAIAAGAPEERCAHAYAFGARTGEAYQIADDL 219
>gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum]
Length = 209
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 20/213 (9%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAAIE-----------CI 82
+L +A Y G GK+ R ++ A+ NV+ V + E
Sbjct: 3 PKLAAAAEYFFKFGVEGKRFRPTVLLLMATALNVHLPIPNSVPVSTELRARQQRIAEITE 62
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+ +D+ RRG ++++ A++AG+ LL+ A ++S + ++
Sbjct: 63 MIHVASLLHDDVLDDADTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALASLRNTEVVSL 122
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ ++ L +Q + + ++ +T KT +L+ +C++ A++A
Sbjct: 123 LATVVEHLVTGETMQMTTTSEQRCSMEYYMQKT------YYKTASLISNSCKAVALLAGQ 176
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +G NLG+ FQL DD+LD
Sbjct: 177 TTEVATLAFEYGRNLGLAFQLIDDVLDFTGTSA 209
>gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
Length = 327
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+D +++ L + +Q + +++A GGK++R L+ +
Sbjct: 22 MDAVIERRLKSDVP-LVSQVSQYIVAA------GGKRLRPALLLLMCGALGYRGDQRYNL 74
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++
Sbjct: 75 AAVVEFIHTATLLHDDV--VDESTLRRGRATANEAFGNPASVLVGDFLYSRAFQMMVEAG 132
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
++ + LQ M D + E + + KT L +
Sbjct: 133 DMRVMQTLAEATNVIAEGEVLQLMNM------HDATLSEDGYLRVIRSKTAKLFEASARL 186
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A++A + ++ +G+ LG FQ+ DD+LD + D
Sbjct: 187 AALLAQSPPPVEQSCADYGQALGTAFQVIDDVLDYDGD 224
>gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
Length = 297
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ID ++ L + + GKK+RS L+ A N +
Sbjct: 1 MQPIDDLIKQYLQELDYEPILT--------MLANTKSGKKLRSKLLLAIA---GENANSY 49
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 50 KICAAIEL---IHLASLLHDDIIDESKLRRGAKSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I ++ + + + D+ + + KT L+ +
Sbjct: 107 QLDACFASIISDAVVKLAVGELM-------DVELSKSFNADKDKYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A+ + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILANLDEK---AFGEYGKNLGLAFQMIDDILDIKGDEK 199
>gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946]
gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946]
Length = 332
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 6/226 (2%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ +I + + L ++ + + Y GGK +R L+
Sbjct: 5 DLRAQIQARMLEALPHPDQAVRAELAEYARMLRDYPERGGKMLRGMLLVYAGLAHGARLE 64
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L V AA+E ++LIHDD+ D RRG+P +H Y A+ AG+ L + +
Sbjct: 65 QLLPVAAALELFQNWALIHDDIE--DASEERRGRPALHRLYGMPLALNAGDALHARMWAM 122
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ LT M M + + ++ + M +
Sbjct: 123 LIEARASYLVLDEFVRVVDLTAQGQHLEMSW--MQTHRFDLTEQDYLLMCAQKAAYYTAV 180
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ A G NLGI FQ+ DD+L+ E D K
Sbjct: 181 APLRLGALSAGVEPP--ATYIEAGLNLGIGFQIVDDVLNLEGDPVK 224
>gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC
35405]
gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC
35405]
Length = 350
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 90/246 (36%), Gaps = 18/246 (7%)
Query: 8 KLQENSKRIDTILDDLLLQ-------------TASHMQTQHNDRLLSAIRYAL-LGGKKI 53
+L+ + I+ LD L + A + +++ +R + GGK+
Sbjct: 9 ELKNRLEHIEKTLDCFLPEKINSSWISQSFGELAYSLPDSFFLNIINPVRDLVKRGGKRW 68
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R L L + A + IE H SL+HDD+ D RRG P HI+Y
Sbjct: 69 RPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAHIKYGL 126
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-MLDIQDEFI 172
TA+ + + L A + + + + S G D
Sbjct: 127 DTALNSASWLYFEALNPLINYEVSESVRAVIYSLYSQNLRRLHLGQSMDIGWHSNSDIIP 186
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE- 231
+ + +KTG+L A E G I A NE ++GI FQ+ DD+ +
Sbjct: 187 SVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQILDDVKNITE 246
Query: 232 EDLPKK 237
+ K+
Sbjct: 247 GNAGKR 252
>gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 326
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 19/240 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + ++E + + + + + Y + GK++R +
Sbjct: 3 ITAQIKEPIREEMELFEQKFRGAMSSKVALLNRITY--------YIVNRKGKQMRPMFIF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + +T A ++ +D+ RRG +++ + A++
Sbjct: 55 LVAKMLSGGKVTERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + I S + ++ LQ ++ +++ + +
Sbjct: 115 GDYLLSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQMEKARRLDIVEEVYYE------ 168
Query: 180 IQKMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
+ + KT L+ C GA +M +A E++R FGE +G+ FQ+ DDL D ED K
Sbjct: 169 VIRQKTATLIAACCAMGACSVMPNA-PELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227
>gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum]
gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 289
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
+ + ID +L+ + + L A+R+A+ GG ++R L A+ +
Sbjct: 2 DVRQHIDNVLEATMTRAD---LPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDL 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A AAIE +HC SL+HDDLP D+ + RRG+ +VH+ Y E A++AG+ L+ AF
Sbjct: 59 PAAADAAAAAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++S + + + L + G+ GQ + + + + +
Sbjct: 119 QGLASGLAMVPERLPLLLGIVADAVGMPAGICAGQAWESEPT-------VKLAEYQRAKT 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
S A A+ E R GE LG +Q+ADDL D D L K
Sbjct: 172 GALFAASTMAGAAAAGREARSWRMLGECLGEAYQVADDLRDVAADPAELGK 222
>gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
Length = 292
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L D + + + + + + GGKK R ++ + + AL
Sbjct: 12 INKALIDFVEEID------NGSNMKKVVAHICQSGGKKTRPVILLLSSRICGSEIENALD 65
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AIE IH SLIHDDL +D G +RRG T H Y A++AG+ L++ + E+ISS
Sbjct: 66 AALAIELIHSASLIHDDL--LDRGVLRRGVKTAHEVYGTAAAMLAGDYLISKSIELISSY 123
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
++ M +L + + + F + KT +L +
Sbjct: 124 GKEIGTEFGRAGMEMAEGEAMDVDLLEKNINNRVEYFNC-------IEKKTASLFAASAV 176
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
GA +A A ++ + R FG LG +Q+ DD+L+
Sbjct: 177 MGAYVAGADEDTVSKFRLFGNKLGTAYQIVDDMLEYT 213
>gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
Length = 349
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 3/186 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR LV A + +ALR A+E +H ++L+HDD+ +D RR +PT
Sbjct: 64 GKAIRPALVLAAARALGGDPESALRAAVAVELVHNFTLLHDDV--IDEDATRRHRPTAWA 121
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ A++ G+ +L A +++ ++L + Q
Sbjct: 122 VFGVPDAVVTGDAVLALAQRLLAEDPHPGSARASARLSACVIELCAGQQADCALEEREPL 181
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KTGAL+ AC GA+ A A + E + FG G+ FQL DDL+
Sbjct: 182 DVTL-DECLTMATAKTGALLGCACALGALYAGADEPAVEAMDGFGREAGLAFQLIDDLIG 240
Query: 230 CEEDLP 235
D
Sbjct: 241 IWGDTA 246
>gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
Length = 311
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 8/212 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++D + M +Q L Y + GK++R V A + + + A
Sbjct: 1 MEDFEKRFRQSMSSQVA-LLNRITHYVVNRKGKQMRPMFVFLVAKMVSEGSVNDRTYRGA 59
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ +D+ RRG +++ + A++ G+ LL+ +
Sbjct: 60 AVIELIHTATLVHDDIVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFD 119
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I S + ++ LQ ++ +D + D I K KT L+ C GA
Sbjct: 120 LLKIISVAVREMSEGELLQIEKARRLDITEDVYYD------IIKKKTATLIAACCSLGAA 173
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +R FGE +G+ FQ+ DDL D
Sbjct: 174 SVNPNSDDVTLMRLFGEKIGMAFQIKDDLFDY 205
>gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
Length = 325
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 8/222 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ I+ + + M ++ L Y + GK++R V A + +
Sbjct: 5 DQIKAPIEQEMILFEEKFFQSMSSKVA-LLNRITYYIVNRKGKQMRPMFVFLTAKMLSGG 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A ++ +D RRG +++ + A++ G+ LL+
Sbjct: 64 SVQERTYRGASVIELIHTATLVHDDVVDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGL 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ I S + ++ LQ ++ ++ + I + KT L
Sbjct: 124 LLCIDNDDFDLLKIISVAVREMSEGELLQIEKARRLDITEEVYYH------IIRQKTATL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ C GA E E++R FG +G+ FQ+ DDL D
Sbjct: 178 IAACCALGAASVSPGSEEVEKMREFGSLIGMAFQIKDDLFDY 219
>gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489]
gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489]
Length = 362
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 20/253 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-----------MQTQHNDRLLSAIRYAL-L 48
MN + L++ I++ + + L A+ + ++H L+ R + L
Sbjct: 1 MNKHFLAHLEQ----IESSIKNFLPLEANSEWKKFSFGNENIDSKHIFPLIETTRSLVDL 56
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGA--AIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK+ R L+ CA + + A ++ D+ +RRGKP
Sbjct: 57 GGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEFVHTASLIHDDIEDSSPVRRGKPA 116
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-ML 165
+I Y TAI AG+ L A I ++ R + G
Sbjct: 117 AYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNRLYSNYLMELRRLHLGQAMDIAWH 176
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + + K KTG L A ++G + ++A + ++ +G FQ+ D
Sbjct: 177 RDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTLASNADEETVKKAGIIASEIGAGFQIID 236
Query: 226 DLLDC-EEDLPKK 237
D+++ + KK
Sbjct: 237 DVINLTTGNPGKK 249
>gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
Length = 325
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 8/222 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ ID ++ + M ++ L Y + GK++R V A L N
Sbjct: 5 ARIREPIDKEMELFEKKFHQSMSSKVP-LLNRITYYIVNRKGKQMRPMFVFLTAKLLNEG 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A ++ +D + RRG +++ + A++ G+ LL
Sbjct: 64 QVNERTYRGASVIELIHTASLVHDDVVDESFKRRGFFSINALWKNKIAVLVGDFLLARGM 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ I S M ++ LQ ++ ++ + + I + KT L
Sbjct: 124 LLSVDNGDFDLLRIISAAMREISEGELLQLEKARRLDITEEVYYE------IIRQKTATL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ C GA E R FGE G+ FQ+ DDL D
Sbjct: 178 IAACCSLGAASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDY 219
>gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
Length = 280
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 21/230 (9%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
L+ ++ L+++ + L + + AL GGK++R +
Sbjct: 2 EYLERRVTMVNDRLEEV-------VSAVEPSELADQLDHVALAGGKRVRPAVTILACEAV 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ +E +H SL+ DD+ +D IRRG P+ +Y AIIA +GLL
Sbjct: 55 GGTPEDAVDFAVGVELVHNASLVVDDI--IDRSDIRRGTPSAWAEYGYGPAIIASDGLLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF ++S S + + + G+ ++ +E + + KT
Sbjct: 113 EAFALLS-----------SSDRATRIVAESMVELGEGEATELVAVPSNEAEYMQLAHRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAL A E GA+ A + E + +G+ FQ+ DD+LD D
Sbjct: 162 GALFRAAAELGAVAASGDAHVVEAFGDYAARVGVAFQIRDDVLDATADAE 211
>gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
Length = 339
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 16/220 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+R++ L + + + + L GGK++R L A + +
Sbjct: 24 LERVEQRLGESVRSSDQLADVTAHHLLA-------AGGKRVRPLLALLAAEVAGSVNEDV 76
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +E H SL HDD+ + + + + I +
Sbjct: 77 IEAAVVVELTHLASLYHDDVM---------DSAPMRRGVETAHTVWGNTVAILTGDMIFA 127
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + LM+ + L + + + KTG+L+ +
Sbjct: 128 RASAMVSALGQESLMIQASTFERLVIGQLRETTGPAEGQDPLEHYLEVIAGKTGSLIAAS 187
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA++ A ++ + + +GE +G+ FQLADD++D
Sbjct: 188 GQYGALLGGAPRSVVDLMVVYGEKVGLAFQLADDIIDLTG 227
>gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
GZfos37B2]
Length = 280
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ L +R+ GGKKIR ++ + LF + + AIE IH SLIH
Sbjct: 19 IDDLDESNLKRIVRHVFDSGGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIH 78
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ +D G +RRG P+V+ Q+ AI+ G+ L++ + E+IS ++
Sbjct: 79 DDI--LDVGLVRRGVPSVYNQFGLAAAILCGDFLISKSIELIS--------KYDRAVIQD 128
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
++ + E F KT +L + G+ + A R
Sbjct: 129 FGRAGMSMSEGEALDVNSNETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINR 188
Query: 210 LRCFGENLGIIFQLADDLLDCE 231
+G +LG+ +Q+ DD+L+C+
Sbjct: 189 CTEYGTHLGMAYQIIDDILECK 210
>gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria
KACC 11862]
Length = 329
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +LQ RI+ LD L+ + GGK +R
Sbjct: 16 PAIRKELQGVLDRIEANLD--------ANDADVEAALIDMFSH---GGKLLRPAFTILIG 64
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F L + A +E +H SL+HDD+ +D+ RR +V ++ + A G+
Sbjct: 65 RFFPAEREPLLNLAATVEMLHTASLVHDDI--IDDSPKRRHAESVQSRFGKDVAAYTGDY 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F ++ + + L + L Q + +
Sbjct: 123 LFAVTFRTLADNTNDINVVRMATRYLERILSGELT-----QRTNHYKRDMTIANYEDQIA 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT AL A G +HA ++ + F N+G+ FQ+ DDLLD D L K
Sbjct: 178 GKTAALFVLAANLGIAASHAPKDFADLATDFAYNVGMAFQILDDLLDYSADSTTLGK 234
>gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase /
farnesyltransferase / Octaprenyl diphosphate synthase
[Burkholderia rhizoxinica HKI 454]
gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) /
Geranyltranstransferase (EC 2.5.1.10) /
Farnesyltransferase (EC 2.5.1.29) / Octaprenyl
diphosphate synthase (EC 2.5.1.-) [Burkholderia
rhizoxinica HKI 454]
Length = 352
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 15/224 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ ++ ++++ ++ L + Q + ++ A GGK++R L+ A+
Sbjct: 40 IADDMQQVNRVIRTRLASDVVLIN-QIAEYIIGA------GGKRLRPALLLLVANALGER 92
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A IE IH +L+HDD+ +D +RRGK T + + +++ G+ L + AF
Sbjct: 93 SGQRHELAAVIEFIHTATLLHDDV--VDESQLRRGKQTANALFGNAASVLVGDFLYSRAF 150
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + I S + LQ + D +D+ + + + KT L
Sbjct: 151 QMMVACDNLRVMQILSDATNVIAEGEVLQLLNM------HDPDVDQARYMQVIRYKTAKL 204
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + GA++A A + FG +G FQ+ DD LD
Sbjct: 205 FEAAAQLGAVIAGAPPALEAAAAEFGRTIGTAFQIMDDWLDYTG 248
>gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
12]
gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
12]
Length = 292
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 98/223 (43%), Gaps = 12/223 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
RI+T LD L+++ + +L SA+ YA+ GG +IR + A +
Sbjct: 6 RIETALDIALIRSRA---GSCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPGLT 62
Query: 74 RVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A IE IHC SL+HDDLP+ DN +RRGKPTVH + E A++ G+ L+ AFE I+
Sbjct: 63 DAACAAIELIHCGSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQIA 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + GM G E + + + KTGAL A
Sbjct: 123 LA----ARSDALRAATLTLELARYSGMPHGICAGQAWESEAQVDLSAYHRAKTGALFTAA 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA A A G +G FQ+ADDL D D
Sbjct: 179 TRMGAAAAGADPE---AWTELGARIGEAFQVADDLRDALYDEE 218
>gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198]
gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198]
Length = 298
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 27/231 (11%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+++ + + + D + + S L + GK +RS L+ A N
Sbjct: 1 MEQKLELVQKQIADYIKELESEEILDFCKHLQN--------GKMLRSRLILAIA----PN 48
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
H +++ A +E I SL+HDD+ +D+ +RRG P+++ + +I+ G+ + AF
Sbjct: 49 HPDVIKLCAIVEMIQNASLLHDDV--IDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAF 106
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + L ++ + D + + + KT +L
Sbjct: 107 FELLDLDKRITKS-------ISDCVVRLSRGEISDVMMSRAFQPDFLKYLNMIEDKTASL 159
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + S +I+A+ + +G NLGI FQ+ DDLLD D L K
Sbjct: 160 VASSAMSASILANLDVKKH---YNYGLNLGIAFQIVDDLLDVFGDDKTLGK 207
>gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
Length = 305
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNHEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 355
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 66/239 (27%), Gaps = 13/239 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
R+D +L + A + + + A+ GK++R+
Sbjct: 13 AAFKTRVDEVLHRFIGLEAEQLSAIDPALGPVAGQLEAAVADGKRLRAAFCYWGWRAVGQ 72
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA + + + D D+ V
Sbjct: 73 PDSDALVRAAASMELVHAAAVVHDDLIDDSPLRHGRPTAHIALRAAVRRRPRAVAAARSL 132
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-----------GGQMLDIQDEFIDETQ 176
++ L + + L + + + ++L +
Sbjct: 133 AMLVGDLLMSLAGQMFATSGLPAAYLARARPLWSLLARELIAGECLEILRTGADPDTTAS 192
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +I+ + G +A A Q +E +G LG FQL DDLL D
Sbjct: 193 LKVIRYKTAKYTVEQPLLIGGALAGAGQRLREGYSAYGLPLGEAFQLRDDLLGLFGDPE 251
>gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
HLK1]
gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
HLK1]
Length = 335
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +D ++ + + + + + + K++R L A L +
Sbjct: 24 DMAAVDALIREHMDSPVPVIPALADHLIAGSA-------KRLRPLLTIAAARLAGARDDS 76
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L++ AA+E IH +L+HDD+ +D+ +RRG+ H+ + ++++ G+ L AFE++
Sbjct: 77 CLKLAAAVEFIHTATLLHDDV--VDSSQLRRGRVAAHLIWGAPSSVLVGDFLFARAFELM 134
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ I ++ ++ LQ D + + I KT L
Sbjct: 135 VGAGSMAALEILARASRVISEGEVLQL------TRSHDLDLTQEVYIEIIGAKTAELFAA 188
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E+GA+ A AS LR FG++LG+ FQL DD LD D L K
Sbjct: 189 AAEAGAVAAGASPERCRALRRFGQDLGLAFQLVDDALDYSGDAKTLGK 236
>gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 350
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 69/237 (29%), Gaps = 15/237 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
R+D L + + + D L + AL GGK++R+
Sbjct: 11 RTRVDAELREFARRETDRLVAIDADLLPVAEQLDVALTGGKRLRASFCYWGWRAAGQPDS 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL AA + + + +D IR G P+ H+ + A +
Sbjct: 71 DALVRAAAAMELVHAAAVV-HDDLIDESPIRHGVPSAHVALRAAFTGRPRPHAGSRALAL 129
Query: 131 I---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---DIQDEFIDETQVF 178
+ + + + ++ G+ L +
Sbjct: 130 LTGDLLMSWAAELFLCCGLPSAYLSRARELWLVMARELIAGECLEVLRTGSPPDTGRSLQ 189
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I+ + G +A A E +G LG FQL DDLL D
Sbjct: 190 VIRYKTAKYTVEHPLRIGGALAGAPGAVMEAFTAYGLPLGEAFQLRDDLLGLFGDPE 246
>gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
20707]
gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
20707]
Length = 327
Score = 81.8 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 10/224 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALR 74
I ++ +Q+ L A+ + L GK IR +V CA L
Sbjct: 13 ITDFVEAFEQDFRQSLQSDAP-VLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQTNEQTL 71
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A + + + + +D RRG+PT++ Y A++ G+ +L+ AF + S
Sbjct: 72 SAALVIELLHTASLI-HDDVIDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLELVSR 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L + + E + + KTGAL + +
Sbjct: 131 EHTPEMLRVVAQAGRDLSIGELMQLSLSKAHT-----YREEDYYAVVDRKTGALFEASAK 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
GA+ A++ + +R G+ +G FQL DDL D + D+ K
Sbjct: 186 LGALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFDYDTALDVGK 229
>gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis
carolinensis]
Length = 350
Score = 81.8 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 13/221 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L +L ++ D L Y G GK R +V A N +H ++ V
Sbjct: 36 KDLKNLYEDIQKELRASTTD-LREMCEYYFDGKGKAFRPMIVVLMARACNFHHKSSGEVQ 94
Query: 77 AAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ I ++ +D+ RRGK TV+ + E A++AG+ +L A + +
Sbjct: 95 ASQRSIALIAEMIHTASLVHDDVIDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTL 154
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ ++ + L LQ ++E KT +L+
Sbjct: 155 ARIGNTTIVSVLTRAIEDLVRGEFLQL------GSKENENERFAHYLEKTFKKTASLIAH 208
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+C++ +I+A E +G+N+GI FQL DD+LD
Sbjct: 209 SCKAVSILACPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTS 249
>gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
Length = 342
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++ RID L + + + L A+ + L GGK++R L+ A +
Sbjct: 22 ERVAALRARIDEAL-------PAVVDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSY 74
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ AL A+E H ++L+HDDL MD RRG TVH +++ TAI+AG+ ++
Sbjct: 75 GTSVDRALPAALAVEVFHNFTLVHDDL--MDEDDERRGGATVHAKWNPGTAILAGDLMMG 132
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++++ + + + + + Q + D+ + + KT
Sbjct: 133 LSYDLLGQVEGTDAEALYAVYHPMVERLCAGQALDASF---ETDDAVTVEAYLDMIDRKT 189
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
GAL+ A E G+++ A E++RL G +G FQ+ D
Sbjct: 190 GALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQIQD 229
>gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8]
gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8]
Length = 343
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
++ RID L + + + L A+ + L GGK++R L+ A +
Sbjct: 23 ERVAALRARIDEAL-------PAVVDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSY 75
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ AL A+E H ++L+HDDL MD RRG TVH +++ TAI+AG+ ++
Sbjct: 76 GTSVDRALPAALAVEVFHNFTLVHDDL--MDEDDERRGGATVHAKWNPGTAILAGDLMMG 133
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+++++ + + + + + Q + D+ + + KT
Sbjct: 134 LSYDLLGQVEGTDAEALYAVYHPMVERLCAGQALDASF---ETDDAVTVEAYLDMIDRKT 190
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
GAL+ A E G+++ A E++RL G +G FQ+ D
Sbjct: 191 GALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQIQD 230
>gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246]
Length = 599
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 14/235 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRY--ALLGGKKIRSFLVTECASLFNVNHLTALR 74
+ L L+ + + Q R AI Y GGK+ R F+ T
Sbjct: 247 EPELPRLVPKARAGSPEQDPLRKHEAIAYDFLARGGKRSRPFITLAAYDALKGAPATLAD 306
Query: 75 VGAA---------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
G + + D+ R G T+H Y TAI G+ L+
Sbjct: 307 SGWELPDHVKRAAVAIEAFHKASLVHDDIEDDDAYRYGAETLHRTYGVGTAINVGDYLIG 366
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQK 182
++ +S + L + + ++ L G + +D+ + I
Sbjct: 367 VGYKCVSRDRKALGAEVAADVLDKLADAHIKLSEGQGAELLWREAKDKSLTTLDALKIYA 426
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+KT A +G +A + ++ + F N+G+ FQ+ +D+ D D K
Sbjct: 427 LKTSPAFEAALYTGVRLAGEATAYEKLIADFSRNVGVAFQILNDIKDWTGDEDNK 481
>gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 361
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 71/238 (29%), Gaps = 19/238 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+D++LDD + +D L ++++ A GGK++R L+T
Sbjct: 22 VDSVLDDFFAEAIDRSDAYGSDYTQLWTSLQSASQGGKRLRPLLLTGVYDQLGGTDTALA 81
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT----------------AI 117
A + + + D + R I
Sbjct: 82 ATIGAAVELLHTAFVVHDDVIDHDVVRRGRLNVSGTFAQRARAEGADDERAENLGAAAGI 141
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ LT A +++ + + G L + + +
Sbjct: 142 LAGDLALTGAHRLVAFSDAPASTRRDLVHLFDHAVYVTAAGELSDVRYSLDLAPVGLADI 201
Query: 178 FMI-QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ ++GA++A A E L G +G FQL DD+ D
Sbjct: 202 VAMAAHKTAVYSFELPLQAGAVLAGADPRTVEWLSHVGRLVGTAFQLLDDIDGVFGDE 259
>gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
Length = 331
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 16/236 (6%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ + + + ++ ++ L + + + GGK++R L
Sbjct: 9 MDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIING-------GGKRLRPLLSV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + L++ A IE IH SL+HDD+ +D +RRG+ T + + +++
Sbjct: 62 LAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L T +F++++ + + L LQ M +
Sbjct: 120 GDFLYTRSFQMMTELDNMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTE------ESYMR 173
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KT L A A++A A+ + L +G+ LG FQL DDLLD D
Sbjct: 174 VIYCKTAKLFEAATLLAAVLAGATPEHETALGNYGKYLGTAFQLTDDLLDYTADTE 229
>gi|68535811|ref|YP_250516.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|260578102|ref|ZP_05846023.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
gi|68263410|emb|CAI36898.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
K411]
gi|258603741|gb|EEW16997.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
43734]
Length = 389
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 76/273 (27%), Gaps = 43/273 (15%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTE 60
L S L +D L + L ++ + AI + + GGK++R
Sbjct: 13 LDSPLSAVPSAVDAQLKEYLSRSQEEFSPIG-SLVGGAITVLSDFIVNGGKRVRPTFAWA 71
Query: 61 CASL--------------FNVNHL--------------------TALRVGAAIECIHCYS 86
+ + I S
Sbjct: 72 GIRAAIEGGGGSPDALCGKGGDATSSSSADFNQGAILNALSAFEFIQACALIHDDIIDRS 131
Query: 87 LIHDDL----PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+ ++ + RG Y AI+ G+ +A ++ +
Sbjct: 132 DTRRGFSTAHRTFESKHRERGWLGSSEHYGVSQAILIGDLAFAWADDLYNGSGLSATALQ 191
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
R++ + G + L+ +I+ + GA +A A
Sbjct: 192 RARPAWRAMRTEVIAGQILDIALEANGSEDVADSFAVIKYKTASYTVARPLHIGAALAGA 251
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ + LR G+++G FQL DD L D
Sbjct: 252 NEQTQSMLRNVGQDIGEAFQLRDDQLGVFGDPE 284
>gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
HH22]
gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
Length = 429
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 81/252 (32%), Gaps = 40/252 (15%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
+L+ R+D L + L+ + Y + GK+IR LV +
Sbjct: 88 RLKPRMARLDAFLREQLVAFE--------PEIRDMADYCIDTSGKRIRPALVFLAGWAGD 139
Query: 67 VNHLTALRVGAAIECIHCYSLIHD------------------------DLPSMDNGYIRR 102
G + I D MD +RR
Sbjct: 140 DECGGGGGGGRIDDDIGALLRSSDSAFPDDPLVRAAAVVELVHLATLVHDDIMDEADVRR 199
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
+PT +Y A++ G+ LL +A + S T SQ + +Q + G
Sbjct: 200 NRPTAARKYGSEAAVLLGDALLAHAVYLASQFPTTEVCAAVSQSTRKVCAGEIVQTLRRG 259
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ + +KT L +C GA ++ + FG +LGI +Q
Sbjct: 260 TTDISR------ADYDRVIDLKTAELFRVSCHLGARLSGH-PDFAPAASTFGRHLGIAYQ 312
Query: 223 LADDLLDCEEDL 234
+ DDL D +
Sbjct: 313 IYDDLADFFGEE 324
>gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
Length = 298
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 6/189 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L F +L+ A+E IH L+HDD+ DN R PT+
Sbjct: 2 GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVE--DNSECRHRMPTLQA 59
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLD 166
+ A+ G+ + + ++ L + ++ H + +
Sbjct: 60 EQGVPIAVNIGDAMNALSLRLVRENIPMLGHQLTQRIYEEFEHLMLKSLEGQASELGWVR 119
Query: 167 IQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
I E + C G ++A + +R FG +G FQ+ D
Sbjct: 120 DNRCDITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQIQD 179
Query: 226 DLLDCEEDL 234
D+L+ D
Sbjct: 180 DVLNLVGDS 188
>gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613]
gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613]
Length = 305
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum]
Length = 339
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L+++ K + + D L + + + D L Y G GK IR + A N
Sbjct: 20 LEDDLKDVYVYIRDALRR------STYQDDLYEIATYYFDGHGKAIRPMVAILMARAINY 73
Query: 68 NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ ++ +D RRGKP+V++ ++ +AG+
Sbjct: 74 HIYKEKSGLLTSQREVAMISEMIHTASLVHDDVIDQSDFRRGKPSVNVMWNHKKVTMAGD 133
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L A +I+ K + SQ++ L +Q + E
Sbjct: 134 FILAVASIMIARLKNNDVTLVLSQVVSDLVQGEFMQL------GSKETENERFAHYLTKT 187
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ + +S ++A A + + +G NLG+ FQL DDLLD
Sbjct: 188 YRKTASLIANSVKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVSSSA 241
>gi|257066522|ref|YP_003152778.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
gi|256798402|gb|ACV29057.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
Length = 278
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 1 MNGGL----PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
MN + ++L N + ID + + + ++ A+ YA GK+IR+
Sbjct: 1 MNNTIYEKYENRLAYNKRIIDEEMKKYFSE---------DSKINEAMLYAADSGKRIRAS 51
Query: 57 LVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L E L N L AIE I YSL+HDDLP+MD+ RRGK +VH Y E
Sbjct: 52 LFLENRRLHTNEISKNDLLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESVHKHYGEDL 111
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+ G+ LL+ A ++ + +++ L +G GM+ GQ+LD++
Sbjct: 112 AILTGDALLSEASMLMMDVSLEDPSYLKAASYL--MKKVGKDGMITGQILDLRRRKSYAE 169
Query: 176 QVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ KTG A + I+ + +L + LG+ FQ+ DDLL
Sbjct: 170 DFLVEVYDKKTGDFFKGAIVAAGIVNGYDEEIIAKLERYSYYLGLGFQIQDDLL 223
>gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu]
Length = 426
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 89/236 (37%), Gaps = 27/236 (11%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
+L + M +L SA Y +G GK+ R ++ A+ NV L G
Sbjct: 97 SILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVE 156
Query: 79 IECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+D+ RRG +++ A++AG+ L
Sbjct: 157 DALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFL 216
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A ++S K + + ++ L +Q D ++ +T
Sbjct: 217 LSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT------YY 270
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L+ +C++ A++A + +G+NLG+ +QL DD+LD L K
Sbjct: 271 KTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
>gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
8271]
gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
8271]
Length = 322
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
S+++ + +++ LD LL + L GGK++R FN
Sbjct: 8 SEIKADLTKVEKELDKLLAVDDPILSKTCVYLLQ-------AGGKRMRPGFTLLSGRFFN 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ L V AIE IH +L+HDD+ +D RRG+PT+ + ++ G+ L
Sbjct: 61 YDFKKILPVAMAIELIHMATLVHDDV--VDASLTRRGRPTLAAGWGNTVSVATGDFLFAK 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A E+I I + + + + Q D + Q + + KT
Sbjct: 119 ALEMIGKIDDPGVAKILADVSVEMCQGEIQQI------WSAFDVKQNFKQYYYRIRRKTA 172
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
L+ +C GA+++ S L +G LGI FQ+
Sbjct: 173 LLIGLSCRLGAMVSDGSLRHMWLLETYGHCLGIAFQI 209
>gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
Length = 305
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
CJ2]
gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
CJ2]
Length = 327
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 15/221 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D ++ L + Q + +++A GGK++R LV +
Sbjct: 19 MRAMDAVIARRLQSEVP-LVAQVSQYIIAA------GGKRLRPALVLLMCGALDYRGAQR 71
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + AF+++
Sbjct: 72 FNLAAVVEFIHTATLLHDDV--VDESTLRRGRSTANEIFGNPASVLVGDFLYSRAFQMMV 129
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ + LQ M D + E + + KT L +
Sbjct: 130 EVGDMRIMQTLAEATNVIAEGEVLQLMNM------HDAGLTEAGYLRVIRSKTAKLFEAS 183
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A++A +S ++ +G+ LG FQ+ DD+LD + +
Sbjct: 184 ARLAALLAQSSPAVEQHCAEYGQALGTAFQVIDDVLDYDGE 224
>gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
Length = 365
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 26/260 (10%)
Query: 3 GGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
L + K +++ L D L + AS + + A Y L GGK+IR+FL
Sbjct: 2 EEFSDLLNYSVKIVESRLREVFDALEKEASEVSPHLSSIPYIARDYTLRGGKRIRAFLAL 61
Query: 60 --ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + + ++ A +E + Y L+HDD+ MD V + + +
Sbjct: 62 VGYWSKAWGTGDVDRVSKLMATLELLQSYLLVHDDIMDMDELRRGGPTVHVWFKEECLKT 121
Query: 117 IIAGNGLLTYAFEIIS----------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
++ N + I+ LK + L T++ GL+ + GQ LD
Sbjct: 122 RVSSNCAHYGVSQAITVGDYLEATAVENLAMLKLPGEAFEKLITTYSRGLRKVAYGQYLD 181
Query: 167 IQDE-----FIDETQVFMIQK-MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGI 219
+ + E + ++ K + GAI + + L + GI
Sbjct: 182 VLYSSLPLARVGENDILVVHKLKTASYTVELPLHLGAIASLKYTDRLLNELSSYAIPAGI 241
Query: 220 IFQLADDLLDCEED---LPK 236
FQL DD++ D K
Sbjct: 242 AFQLRDDIIGLFGDPRTTGK 261
>gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
Length = 325
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 8/223 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + + I ++ + A M+++ L Y + GK++R V A + N
Sbjct: 4 VAQIKEPIAYEMELFEEKFALSMRSKVA-LLNRITHYIVNRKGKQMRPMFVFLTAKMMNS 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D+ +RR +++ + A++ G+ L +
Sbjct: 63 GEVNDRTYRGASVIELIHTASLVHDDVVDDSNMRRSFFSLNALWKNKIAVLVGDFLFSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ ++ + + I + KT
Sbjct: 123 LLLSIDNGDTDLLQIISVAVREISEGELLQIEKARKLDITEELYYE------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L+ C GA HA E +R+ FGE +G+ FQ+ DDL D
Sbjct: 177 LIAACCAMGAQAVHAKGKEVKRMHKFGELIGMAFQIKDDLFDY 219
>gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
Length = 312
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 63/189 (33%), Gaps = 10/189 (5%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R LV A L+ L A+E +H SL+HDD+ +
Sbjct: 33 GKMMRPMLVLLAAKLYGEICPATLHAAVALELLHNASLVHDDVVDESTERRGQLSVNAIF 92
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ + L+ + L + Q +
Sbjct: 93 NNKVAVLSGDYLLATALVQVGLTRNHAIIDIVSCLGQDLAEGELLQLSNVSNLQFSEDIY 152
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + KT L ++GA+ A E R FGE +G+ FQ+ DD+ D
Sbjct: 153 FD--------VIRKKTAVLFAACTKAGALSVGADGERAEFARLFGEYIGLCFQIKDDIFD 204
Query: 230 CEE--DLPK 236
E ++ K
Sbjct: 205 YFESREIGK 213
>gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 324
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 21/234 (8%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++L++ K DT L L S + GK +R LV A L
Sbjct: 11 ISAELEDFKKHFDTCLSSSNLLLNSVIAHIRQKN-----------GKMMRPILVLLAAKL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+N L A+E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL
Sbjct: 60 YNEVRPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLTGDYLL 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + + + + L L Q+ ++ + E F + + K
Sbjct: 118 ATALVEVGMTRNY------AIIDLVSNLGQDLAEGELLQLSNVSNPEYSEEVYFDVIRKK 171
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
T L ++GA+ + E R FGE +G+ FQ+ DD+ D E ++ K
Sbjct: 172 TAVLFAACMKAGALSVGVDDEKAEYARLFGEYIGLCFQIKDDIFDYYENKEIGK 225
>gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 349
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+++L+ L + +L +A R+ + GGK+IR + A+
Sbjct: 37 ESLLE--LEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+
Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + L T ++G + L ++ + ++ A
Sbjct: 153 ARSA----ALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAG 208
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L FGE +G+ FQL DD LD D L K+
Sbjct: 209 AWAAGEV-GEIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKR 252
>gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
Length = 293
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ I+T +++ L + + + + + YAL GGK+IR LV A +
Sbjct: 7 FEAYRVMIETGIENSLDEFGPKGFS-----IRAPVEYALTSGGKRIRPMLVCMMAKGLGM 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L AIE IH +LI DDLP MD+ RRG+PTVH +DE +A++A L+ A
Sbjct: 62 -GRDVLDSALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAA 120
Query: 128 FEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ I ++ D + N G+ G+LGGQ D+ V
Sbjct: 121 YSRIRLNAKKLKSLGVDSKEVDCAYDIISDITDKNFGVHGVLGGQYEDMFFTNHGPEHVQ 180
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KTGAL AC SG + + ++ F + G++FQ+ DD+LD +D
Sbjct: 181 SIINKKTGALFEIACVSGWLFGGGTPQCVPQVLEFSQTFGLLFQIKDDILDIHQD 235
>gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus
fer1]
Length = 352
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 94/247 (38%), Gaps = 12/247 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ L +I+ L+ + T+ D ++ + L GGK++R L+
Sbjct: 4 IEDNYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPILMI 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT----------VHI 109
++F+ ++ +IE + LIHDD+ + +
Sbjct: 64 MGYNMFSGQDERIIKASISIELAQSFLLIHDDIMDQSDMRRGKPSFHKAVEGSLDGNDAT 123
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ E AI AG+ + T++ E + +L++ + + S +G + I++
Sbjct: 124 RIAENLAISAGDLIDTFSHEALLRSGFELENLLDADFEFSRIIEDTGKGQILDIYSSIEN 183
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ +E + + GA ++ ++ + ++ FG+ GI FQL DD+L
Sbjct: 184 LYSEERLTKLHFLKTARYTVQGPLLMGAYLSG-NKKYIQEIKDFGKYAGIAFQLYDDMLG 242
Query: 230 CEEDLPK 236
K
Sbjct: 243 IFGVEEK 249
>gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
Length = 274
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 13/216 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV- 75
L+ L L+ + + Y GK++R L A + ++ +
Sbjct: 12 KELNQLELELKNIASKLDSTVTQDIFTYFFSIPGKRLRPTLTFLSAGAISSELTSSAKHN 71
Query: 76 --GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+I +S +D +RRG+ T++ + A++AG+ L + AF I S
Sbjct: 72 LIQLSISLELIHSASLIHDDIIDGDLLRRGQKTLNKTFGNKIAVLAGDALYSRAFTIFS- 130
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + M ++L+ + D F I KT + M C
Sbjct: 131 --------DTLPREFAQVMGRVTESMSVAEILNANNPSPDRETYFKIILGKTASFMSACC 182
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
G +A+A E L +GENLG+ +Q+ DD +D
Sbjct: 183 RLGGSIAYAPYEESNMLSKYGENLGMAYQILDDYID 218
>gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 247
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 86/220 (39%), Gaps = 8/220 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRV 75
L + + T L +A R G GK R+ LV A+ + A V
Sbjct: 2 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I++
Sbjct: 62 SAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLT 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + L L + + KT AL C
Sbjct: 120 DECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCAL 177
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA++A+A L FG LG+ FQ DDL+ D
Sbjct: 178 GALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 217
>gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
Length = 325
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 13/241 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L + I LD + + + H + I + + GGK+IR +
Sbjct: 1 MTNEFNNTLLQLKSLIQQDLDAMEILISQHSDKHIA-LITEIIHHLIKSGGKRIRPIIFF 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N + + + AAIE IH +L+HDD+ +D +RRGK T + + +I+
Sbjct: 60 IICKMLNCTNENKILIAAAIEFIHNATLLHDDV--IDESDLRRGKKTSNFIWGNKASILV 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL +F+ + K +I SQ ++ Q + + I + +
Sbjct: 118 GDFLLAISFQWLIECKNLNILSILSQTSNTIVVGEIQQML------SSHNINISKEKYIE 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I KT +L CES A +A + E + L+ FG N GI FQ+ DD+LD K
Sbjct: 172 IISAKTASLFGATCESAAHLAQVNLQESKALKSFGNNFGIAFQIMDDILDYTASNAQFGK 231
Query: 237 K 237
K
Sbjct: 232 K 232
>gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 349
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+++L+ L + +L +A R+ + GGK+IR + A+
Sbjct: 37 ESLLE--LEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+
Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + L T ++G + L ++ + ++ A
Sbjct: 153 ARSA----ALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAG 208
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
L FGE +G+ FQL DD LD D L K+
Sbjct: 209 AWAAGEV-GEIPAALVRFGEGIGVAFQLVDDALDYAADPGLLGKR 252
>gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 337
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 15/231 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
GL S++ + ++ L + + + + GGK++R L CA
Sbjct: 11 PGLESRISPGLEAVERQLAGAVSSSRDLVDELTA-------HLSAAGGKRLRPLLTLVCA 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L RV + L MD+ RRG P+ + AI+AG+
Sbjct: 64 QLGRPELALGERVITGATAVELTHLASLYHDDVMDSAPTRRGVPSAQRLWGNNRAILAGD 123
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++++ ++ T + +
Sbjct: 124 VLFARASALVAALGPEMVTRHAVTFERLCTGQ-------LNETFGPAPGEDPVEFYLRVL 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ A GA+++ A + + FGE +G+ FQ+ADD+LD
Sbjct: 177 ADKTGSLVSSAAAFGALLSDAGAFVGDVVAEFGERVGVAFQIADDVLDLAS 227
>gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
9]
gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
9]
Length = 278
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++++ ++ L + Q + ++ A GGK++R L+ A N
Sbjct: 1 MEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVAGALGENTNQK 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 54 HVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I S+ ++ LQ + D +DE + + + KT L A
Sbjct: 112 GVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIRYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A A + +G +G FQ+ DD LD
Sbjct: 166 ARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 205
>gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
Length = 349
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 19/228 (8%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
+++L+ L + +L +A R+ + GGK+IR + A+
Sbjct: 37 ESLLE--LEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E H +L+HDD+ +D+G +RRG+P + + ++++G+ LLT A EI+S+
Sbjct: 95 AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGML---GGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + + G + + + + A A
Sbjct: 153 ARSAALPPLLATMRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWAAAAGAWAA 212
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
E G L FGE +G+ FQL DD LD D L K+
Sbjct: 213 GEVG--------EIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKR 252
>gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
Length = 300
Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
Length = 360
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 76/244 (31%), Gaps = 22/244 (9%)
Query: 14 KRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
ID + D + + + D + Y L GGK++R +
Sbjct: 11 AAIDAAISDFFAERRAEAASLGEDFAATVGELENYVLRGGKRVRPTFAWLGWIGAGGDPD 70
Query: 71 TALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAII--------- 118
+ C L +D RRG P H+ + E +
Sbjct: 71 DPVAPAVLRACAGFELLHASGLIHDDIIDASRTRRGHPAAHVVFAERHRMRRFSGDPGAF 130
Query: 119 -------AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
G+ L ++ ++ + R + S + G L + DE
Sbjct: 131 GAGAAILVGDLALVWSDVMVRASGLPADAQTRLGPVWSAVRYEVMYGQLLDLISQASDEE 190
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + Q + + GA +A A + R FG ++GI FQL DDLL
Sbjct: 191 GVDAALLVDQYKTASYTVERPLQFGAAIAGADAGLVDAYRAFGADIGIAFQLRDDLLGVF 250
Query: 232 EDLP 235
D
Sbjct: 251 GDPA 254
>gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
9343]
gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_16]
gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
9343]
gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_16]
gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
638R]
Length = 324
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 10/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L I T L+D S + + + GK +R LV A L+
Sbjct: 3 SLSLIKSPITTELEDFKNLFDSSLSSSNLLLNNVIAHIRQRNGKMMRPILVLLVAKLYGE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL +
Sbjct: 63 IKPETLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLVGDFLLATS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + L L LQ ++ + ET F + + KT A
Sbjct: 121 LVHAERTRNHDIIGVVACLGQDLAEGEILQL------SNVSNREYSETIYFDVIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
L ++ A+ + + E R FGEN+GI FQ+ DD+ D E ++ K
Sbjct: 175 LFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDDIFDYFESKEIGK 225
>gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii]
Length = 291
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
T+L + + A L +A+ AL GK+ R L+ A T +
Sbjct: 11 TLLQTRIEEIAQGFGAVLQP-LGAAMA-ALSSGKRFRGMLMLLAAEASGGVCDTIVDAAC 68
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A+E +H SLI DDLP MD+ +RRG+P H+ + E A++ G L+T A +++ +
Sbjct: 69 AVEMVHAASLIFDDLPCMDDAGLRRGQPATHVAHGESRAVLGGIALITEAMALLAGAR-G 127
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+R+QL+ L+ ++G QG+ GQ LD+ Q +KTG L E A
Sbjct: 128 ASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNGAGVEQE-QDLKTGVLFIAGLEMLA 186
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ E+ ++ FG LG +FQ DDLL+ D L K
Sbjct: 187 VIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLEVVGDQAALGK 228
>gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces
griseoaurantiacus M045]
gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + +A+ A+E +H ++L+HDD+ +D +RR +P
Sbjct: 62 GGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDV--IDGDDLRRHRPAAW 119
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ A++ G+ LL A +++ + + + + + L + +
Sbjct: 120 SVFGTPAAVLTGDALLVAAMRVLT---DTQQQRMAVAVKELVDALLELVEGQSRDVAYEK 176
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ Q + + KTG+LM A G ++A A + LR FG LG+ FQ ADD+L
Sbjct: 177 APEVSVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCADDVL 236
Query: 229 DCEE 232
Sbjct: 237 GIWG 240
>gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Meleagris gallopavo]
Length = 336
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 13/221 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L +L + + L Y G GK R +V A N++H + V
Sbjct: 22 KDLKNLYEDIKKELLVSTAE-LREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQ 80
Query: 77 AAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ + ++ +D+ RRGK TV+ + E A++AG+ +L+ A +
Sbjct: 81 ASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLAL 140
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +Q++ L LQ ++E KT +L+
Sbjct: 141 ARIGNTTIISVLTQVIEDLVRGEFLQL------GSKENENERFAHYLEKTFKKTASLIAN 194
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+C++ +I++ E +G+N+GI FQL DD+LD
Sbjct: 195 SCKAVSILSCPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTS 235
>gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
Length = 325
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 81/222 (36%), Gaps = 10/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHND--RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
+ I++++ L ++ + L Y + GK++R V + L N +
Sbjct: 9 EPIIEEMELFEKKFYESMTSKVALLNRITHYIVNRKGKQMRPMFVFLTSKLINNGEVNER 68
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A ++ +D RRG +++ + A++ G+ LL+ +
Sbjct: 69 TYRGASVIELIHTATLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSID 128
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
I S + ++ LQ ++ + + + I + KT L+ C
Sbjct: 129 NGDFDLLKIISVAVREMSEGELLQIEKARRLDITEAIYYE------IIRQKTATLIAACC 182
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA E E R FGE G+ FQ+ DDL D D
Sbjct: 183 SLGACSVKPDSEEVEVFRKFGEYCGMAFQIKDDLFDY-GDAA 223
>gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
Length = 343
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 25/233 (10%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--------FN 66
+ L ++L ++ D + GGK++R + A
Sbjct: 30 AFEQRLREVLRSEVEFIELIGEDLVA-------AGGKRLRPLVTLLSAQALQVGAPEDAG 82
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+H AL + IE +H SL+HDDL +D+ RRG+ +Y V ++++G+ +L
Sbjct: 83 GHHGDALALAICIELLHSASLLHDDL--IDDADTRRGQEAAFRRYGNVVSVMSGDFMLAR 140
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
++S + + S+ Q Q I KT
Sbjct: 141 LLMLLSELPAAARLTRAFGEVASVICEG-----EVLQFQVAAYGNPTPEQYSRIIYGKTA 195
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AL+ A + A++ AS +++ LR +G LG+ FQ+ DDLLD DL K
Sbjct: 196 ALLELAAAAPALLLGASAAQEQALRQYGRELGMAFQIRDDLLDLLGREEDLGK 248
>gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
Length = 207
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + R+D LD L + +Q RL A+RY+++ GGK++R L
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A A+E IH YSL+HDDLP+MD+ +RRG+PT H +DE TAI+A +GL
Sbjct: 57 ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116
Query: 124 LTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMI 180
AFE+++ + + + +++ L G GM+GGQ +D+ + Q ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERL 210
+ KTGAL+ + GA+ + A L
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPAALAAL 207
>gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum JDM1]
Length = 330
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +LQ+ + L+ + ND +L I GGK +R +
Sbjct: 15 PALQPELQQVMQ--------LMTANINIQDADINDAILEMIH---GGGKLLRPAYCLLFS 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A++E +H +LIHDD+ +D+ +RR T+ ++ + TA+ AG+
Sbjct: 64 QFTTTDRQRMVALAASLETLHTATLIHDDI--VDDAALRRHHVTIQERFGKDTAVYAGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+I++ + K + + +Q Q I + +
Sbjct: 122 LFVVVFKILAHYSSSFKSIQMNSENMEKILVGEVQ-----QKNRHYHLDITMAEYLQQIQ 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L +C GA + S + +R R G +G+ FQ+ DD+LD
Sbjct: 177 GKTAELFALSCFLGAYESGQSSHFAQRARKAGLAIGMAFQILDDILDY 224
>gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
Length = 288
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+L+E ++ + A+ + L A+ YA GGK++R+FL E A++
Sbjct: 2 FSERLKEVQDGVEAAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ A+ A+E +H YSL+HDD+P MDN +RRG PTVH ++DE TA++AG+ L
Sbjct: 55 HGISMEQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHRKWDEATAVLAGDALQ 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T AFE+ + P +N + + + + G + + + I +++
Sbjct: 115 TLAFELCTDPVLGSAENRVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQ 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
G + A + ++ L + LG+ FQ+ADD+LD E D K+
Sbjct: 175 AGKTGALISFAAQAGAIIAGADRALLAAYATALGLAFQIADDILDVEGDEEAAGKR 230
>gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
11551]
gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
11551]
Length = 280
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 24/234 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
L+ +D L+ + + L + + AL GGK++R +
Sbjct: 2 EYLERRVSMVDDRLEAV-------IDAVDPPELSDELAHVALAGGKRVRPAVTILSCEAC 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+ AIE +H SL+ D +D IRRG P+ +Y +IIA +GLL
Sbjct: 55 GGDADAAVDFAVAIELVHNASLVID--DIIDRSDIRRGTPSAWAEYGYGPSIIASDGLLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF ++S + + G+ ++ +E + + + KT
Sbjct: 113 EAFALLS-----------VDDHAMQIVAESMVELGEGEATELVARPTNEAEYMELARRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GAL A E GA+ A A E + E +G+ FQ+ DD+LD D L K
Sbjct: 162 GALFRAAAELGAVAADADPFTVEAFGEYAERVGVAFQIRDDVLDATADADELGK 215
>gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
Length = 327
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M L L + I T L + + + ++ + L A+ + GGK++R L+
Sbjct: 1 MRMDL---LSLIQQPIQTDLATFISRFNASLE-HSDGLLSMALEHIKQRGGKRMRPILIL 56
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + A +E +H SL+HDD+ +D RRG+ +V+ Y+ A++
Sbjct: 57 LLAKNYGTITDAAHHAAVGLELLHTASLVHDDV--VDESSERRGQSSVNATYNNKVAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ +L+ A ++ ++ N +QL +L+ LQ ++ +
Sbjct: 115 GDYILSTALLHVAYTQSDYIINSLAQLGRTLSKGEILQLTNIQNEEISEEVYYQ------ 168
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + KT AL A A AS E R FG +LG IFQ+ DD+ D
Sbjct: 169 VIEQKTAALFETCAAVAAKAAGASNESIEAARKFGRDLGTIFQIRDDIFDYY 220
>gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 557
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 78/231 (33%), Gaps = 5/231 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
L + + L + L + D +L RYALL GK +R L+ A
Sbjct: 228 EEALSPAAVAVVARLREALRAQ----WPETGDPVLDISRYALLTPGKMLRPLLLASAAGA 283
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A+E +H SL+HDD+ D + E +
Sbjct: 284 VGGDVERVVPAALAVEYLHVGSLVHDDVIDDDEVRRGQPSVQHRFGVPEAIVVGDALIFK 343
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
T++ + + + + D + +K
Sbjct: 344 TFSAVAACVELGVTAEAALGAARAIADAGVDVCRGQALEGALAADPTHPLGDYVTVMALK 403
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL AC +GA++ E + + E+LG+ FQ+ DDLL D
Sbjct: 404 TGALFRGACRAGALLGGGGPEAVEAVTSYAEHLGLAFQVHDDLLPYLSDSA 454
>gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
Length = 416
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 27/234 (11%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFN-----------VNH 69
+ M +L SA Y +G GK+ R ++ A+ N +
Sbjct: 89 VANRLRSMVVTEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAMNISILEPSLRGPGDA 148
Query: 70 LTALRVGAAIECI----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
LT + +D+ RRG +++ A++AG+ LL+
Sbjct: 149 LTTELRARQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLS 208
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A ++S K ++ ++++ L +Q ++ KT
Sbjct: 209 RACVALASLKNTEVVSLLAKVVEHLVTGETMQM------TTTCEQRCSMEYYMQKTYYKT 262
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+L+ +C++ A++ + +G+NLG+ +QL DD+LD L K
Sbjct: 263 ASLISNSCKAIALLGGQTSEVAMLAYEYGKNLGLAYQLIDDVLDFTGTSASLGK 316
>gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
Length = 299
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 80/223 (35%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ++ ++ L+ + + +L GGK++R+ L+ A
Sbjct: 5 LETVENLIAKLIDEVDYPHAAELFKKL--------SGGKRLRARLILTIA------PHEP 50
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ +D +RRG P+V+ TAI+ G+ L + AF ++
Sbjct: 51 KAPLLGAIVELIHAASLLHDDVIDEAQLRRGVPSVNATEGSKTAIMLGDILYSKAFSELT 110
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
S + + + + M + D + +KT L+
Sbjct: 111 SFDPSIARAVAESVTRLSVGEMMDVSM-------AERFNTDRDLYLKMLYLKTATLIEAC 163
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S A++A +G+NLG+ FQ+ DD+LD D
Sbjct: 164 AYSAAVLAGKDAEAHA---TYGKNLGLAFQIVDDILDITADEA 203
>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
T++ ++ + + Q+ D++ A+RY++L G K+ + LF N L A
Sbjct: 60 TLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPT 119
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A+E +H SLIHDDLP MD+ RRG+P+ H Y AI+AG+ L F I S
Sbjct: 120 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQT 179
Query: 136 TQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ +++ + +G +GM GQ LD+ V +Q+ K G + +
Sbjct: 180 PSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDL---EGGPNAVEFVQEKKYGEMGECSA 236
Query: 194 ESGAIMAHASQNEKERLRC 212
G ++A A+ +E R
Sbjct: 237 VCGGLLAGATDDEIRRYEE 255
>gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
Welgevonden]
Length = 325
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + L E I LD+ + + ++ + I++ + GGK+IR +
Sbjct: 1 MANDFYTTLTELKSLIQQDLDE-MEHLILYQDNKNITLITEIIQHLIKSGGKRIRPIIFF 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ N N + + AAIE IH +L+HDD+ +D +RRG+ T + + +I+
Sbjct: 60 IICKMLNYNKNDKVYIAAAIEFIHNATLLHDDV--IDESELRRGEKTSNFLWGNKASILV 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL +F+ + K +I S+ ++ Q + + I + +
Sbjct: 118 GDFLLAVSFQWLIQCKNLTILSILSKTSNTIIIGEVEQMV------ASYNINISQEKYID 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PK 236
I KT +L CES A +A + + L+ FG NLGI FQ+ DD+LD K
Sbjct: 172 IISAKTASLFEATCESAANLAEVNNEKIHALKQFGYNLGISFQILDDILDYTASETQFGK 231
Query: 237 K 237
K
Sbjct: 232 K 232
>gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 392
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 20/243 (8%)
Query: 13 SKRIDTILDDLLL----QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ +D +L + L + ++ + L GGK++R+ V +
Sbjct: 34 AAAVDAVLAEHLRTRLGEARRTDAVFADEVASRVAAFVLQGGKRLRTAFVRCGWLAAGGS 93
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT------------- 115
+ + MD +RRG P VH Q+ +
Sbjct: 94 GDPGTPLRVGAALELLQACALVHDDVMDESPVRRGAPAVHAQFARLHREGRMRGSATSYS 153
Query: 116 ---AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
A++AG+ L +A ++++ + G
Sbjct: 154 ATAAVLAGDLALVWADDLLTETALSSPYGGHLHREWQAMRGEMVAGQYLDMRAQATGSSD 213
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + GA +A A + LR G G+ FQL DDLL
Sbjct: 214 ETQARNIATLKSALYTVERPLALGACLAGAGAPVMDALRSAGRCAGLAFQLHDDLLGAFG 273
Query: 233 DLP 235
D
Sbjct: 274 DPA 276
>gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
Length = 290
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 106/235 (45%), Gaps = 16/235 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ ID + L S + + + + YAL GGK+IR LV + +
Sbjct: 4 FETYRAMIDEAIKHSLEDFGSKGVS-----IRAPVEYALTSGGKRIRPMLVCMFSKGLGM 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N L AIE IH +LI DDLP MD+ RRG+PTVH +DE +A++A L+ A
Sbjct: 59 NRD-VLDSALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAA 117
Query: 128 FEIISSP---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ I S + D + N G+ G+LGGQ D+ + V
Sbjct: 118 YSRIRSNAKKLKSQGVDPREVDFAYDTISEITDKNFGVNGVLGGQYEDMFFKNEGPEYVQ 177
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I KTGAL AC SG + ++ F + G++FQ+ DD+LD +D
Sbjct: 178 SIINKKTGALFEIACASGWLFGGGDPLCVPQILEFSKTFGLLFQMKDDILDIHQD 232
>gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10)
(Tm0161) From Thermotoga Maritima At 1.90 A Resolution
Length = 284
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 81/197 (41%), Gaps = 9/197 (4%)
Query: 41 SAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
A+ Y+ +GG +IR LV V L V A+E H SLIHDDLP +DN
Sbjct: 36 EAMLYSATVGGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNAD 95
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
RRG P+ H Y E A++AG+GL ++ + N S T L G
Sbjct: 96 FRRGXPSCHRTYGEDIALLAGDGLF-----FLAFSQISXIGNSXIFEEFSETAYXLLLGE 150
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ + + + V + TGAL F + I+ L GE G+
Sbjct: 151 AMDVEFERRXMEVSQEMVERMYAFXTGALFAFCFSAPFILXGXDHTXMXLL---GEXFGV 207
Query: 220 IFQLADDLLDCEEDLPK 236
FQ+ DDL D K
Sbjct: 208 AFQIYDDLXDILGSFEK 224
>gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 335
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 72/185 (38%), Gaps = 9/185 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC--YSLIHDDLPSMDNGYIRRGKPTV 107
GK +R L+ CASL R + + + +D+ RRGKP +
Sbjct: 54 GKMLRPRLLLLCASL-GPAWHAHQREAVELAAMVELIHLASLIHDDIIDDARFRRGKPAI 112
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+Y + A+ AG+ ++ I ++ + + GQ
Sbjct: 113 QSRYGKDAAVYAGDFIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEI------GQARLR 166
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ F K KTGAL AC GA+ + E+L FGE LGI+FQL DDL
Sbjct: 167 HRPDATQAMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQLRDDL 226
Query: 228 LDCEE 232
LD
Sbjct: 227 LDFTA 231
>gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 274
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 16/238 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
MN +N ID + ++ A+ Y++ GK++R+ L E
Sbjct: 1 MNKEYKEIFLQNKNLIDQEIAKYFNSE---------SKIEEAMLYSMEDGKRVRATLFLE 51
Query: 61 CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L AIE I YSL+HDDLP+MD+ RRGK +VH + E I+
Sbjct: 52 TRKLSLKEISKNDFLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESVHKHFGEDLGILT 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL A +II + + + L +GL GM+ GQ+LD++ + +
Sbjct: 112 GDALLNEASKIIMEVSLNDPSYLSAGVYLLE--KVGLSGMIEGQILDLRRRNNYDKDFLI 169
Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL--DCEEDL 234
+ KT + ++ S E L + LG+ FQL DDLL D D
Sbjct: 170 EVYDKKTADFFKACTVAAGLVNGFSDQEIMSLENYAYYLGLGFQLQDDLLEEDY-GDE 226
>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 168
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
KL+E + ++ L +L + + A+RY++ GGK++R L
Sbjct: 2 FKEKLREKQQLVEKELHRILDIEEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + AL V AIE IH YSLIHDDLP+MDN +RRGKPT H Y E AI+AG+GL
Sbjct: 56 LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115
Query: 124 LTYAFEIISSPKTQLKDNI 142
L +E++ + ++
Sbjct: 116 LNLGYEVLVRHALEHPEDY 134
>gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
Length = 325
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 8/216 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
I ++ + M ++ L Y + GK++R V A + +
Sbjct: 11 IQNEMELFEEKFKDSMLSKVP-LLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERT 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A ++ +D+ +RR +V+ + A++ G+ LL+ +
Sbjct: 70 YRGAAVVELIHTATLVHDDIVDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKGLLLSIDN 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ S + ++ LQ ++ + + D I + KT L+ C
Sbjct: 130 NDFDLLKLISIAVREMSEGELLQIEKARKLDITEAIYFD------IIRKKTATLIAACCG 183
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
GA A+Q+ ++R FGE +GI FQ+ DDL D
Sbjct: 184 IGAASVGANQDCIRKMRKFGEYIGIAFQIKDDLFDY 219
>gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
43183]
gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
43183]
Length = 324
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I L+D S + + + GK +R LV A L+N
Sbjct: 3 SISLIKSPISAELEDFKKHFDSCLSSSNLLLNSVIAHIRQKNGKMMRPILVLLAAKLYNE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L A+E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL A
Sbjct: 63 ICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNAVFNNKVAVLTGDYLLATA 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + +I S+L L LQ ++ + E F + + KT
Sbjct: 121 LVEVGMTRNYGIIDIVSKLGQDLAEGELLQL------SNVSNPEYSEDIYFDVIRKKTAV 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
L ++GA+ A + E R FGE +G+ FQ+ DD+ D E ++ K
Sbjct: 175 LFAACMKAGALSVGAGDEKAEYARLFGEYIGLCFQIKDDIFDYYESKEIGK 225
>gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus
NJ8700]
gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase)
[Aggregatibacter aphrophilus NJ8700]
Length = 323
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
MN + + + ++++ + L + Y + GG K+IR +
Sbjct: 3 MNA-IQALSHADMQKVNESILAQLNSDVVLINQLGF--------YIVQGGGKRIRPLIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A+ +E IH SL+HDD+ +D +RRG+ T + ++ +++
Sbjct: 54 LAARALGFEGPQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLV 111
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++ ++ I + L Q M ++ ++
Sbjct: 112 GDFIYTRAFQLVAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMR------ 165
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A +++ +++ L+ +G LG FQL DD+LD + L K
Sbjct: 166 VIYSKTARLFEVAAQAAAIIAGSNEAQEQALQSYGRYLGTAFQLVDDVLDYSANVKALGK 225
>gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
Length = 445
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 126 LDDELKYFYDDVRDLLQS------GTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 179
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 180 HLNNESHQLVHKQRQVALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 239
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +I+ ++ + SQ++ L +Q + E
Sbjct: 240 YILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 293
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 294 YRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 347
>gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
Length = 305
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 6/206 (2%)
Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+Q + + + GGK +R + F A ++
Sbjct: 1 MEQAIQIDNQEIQFAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHT 59
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
+D RRG PT+ ++ TA+ G+ L F+++S + LK +
Sbjct: 60 ATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSR 119
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ GQM + + + Q KT L +C GA + SQ
Sbjct: 120 SMEKVLTG-----ELGQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRF 174
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
+R GEN+G+ FQ+ DD+LD +
Sbjct: 175 AKRCGEIGENIGLAFQIIDDILDYTQ 200
>gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
Length = 305
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
N + +A+ + GGK +R + F A ++
Sbjct: 7 IDNQEIQAAVHDMIHSGGKLLRPAYQLLFS-YFGEQRDPKKATALAASIELLHTATLVHD 65
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+D RRG PT+ ++ TA+ G+ L F+++S + LK + +
Sbjct: 66 DIVDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLKSIQLNSRSMEKVL 125
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQM + + + Q KT L +C GA + SQ +R
Sbjct: 126 TG-----ELGQMDNRYNFEVTIDQYLKNVSGKTAELFALSCFVGAYESGTSQRFAKRCGE 180
Query: 213 FGENLGIIFQLADDLLDCEE 232
GEN+G+ FQ+ DD+LD +
Sbjct: 181 IGENIGLAFQIIDDILDYTQ 200
>gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 349
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 7/233 (3%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTECA 62
+ L+ +D L + ++ A G GK IR LV A
Sbjct: 17 ALLERTRDAVDPQLRAAVETLPGAIRRVAKYHFGWQDADGTPAAGRAGKAIRPALVLAAA 76
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A+R A+E H ++L+HDD+ +D RR +PT + A+I G+
Sbjct: 77 RAVGGDPDAAMRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGVPDAVITGDA 134
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ + A +++ + +L + Q G D+ + +
Sbjct: 135 MFSLALRLLTDDPHPASPHAAGRLSTCVIELCAGQQADCGLEDRGPDDVTL-DECLAMAM 193
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ AC GA+ A + + FG G+ FQL DDL+ D
Sbjct: 194 AKTGALLGCACALGALYGGADERAVRAMDGFGREAGLAFQLIDDLIGIWGDTA 246
>gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum WCFS1]
gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 330
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L +LQ+ + L+ + ND +L I GGK +R +
Sbjct: 15 PALQPELQQVMQ--------LMTANINIQDADINDAILEMIH---GGGKLLRPAYCLLFS 63
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + A++E +H +LIHDD+ +D+ +RR T+ ++ + TA+ AG+
Sbjct: 64 QFTTTDRQRMVALAASLETLHTATLIHDDI--VDDAALRRHHVTIQERFGKDTAVYAGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L F+I++ + K + + +Q Q I + +
Sbjct: 122 LFVVVFKILAHYSSSFKSIQMNSENMEKILVGEVQ-----QKDRHYHLDITMAEYLQQIQ 176
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L +C GA + S + +R R G +G+ FQ+ DD+LD
Sbjct: 177 GKTAELFALSCFLGAYESGQSSHFAQRARKAGLAIGMAFQILDDILDY 224
>gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
Length = 295
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
E + ++ ++D + + + L + + GGK+IR ++ + + + ++
Sbjct: 17 EEYRYVEAGIEDSIARIE-------DSSLKKMVEHVCHFGGKRIRPIILLLASEICSGSY 69
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+L A+E +H SLIHDDL +D G IRR P+ ++ A++ G+ L+ +
Sbjct: 70 SRSLDAALAVEMMHSASLIHDDL--LDQGLIRRNLPSAPEKFGPSRALLCGDYLIAKSIA 127
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
IS ++ + M + + + + KT +L
Sbjct: 128 FISPYGEKVIRDFGKAGMDMAEGEVLDLRLDDDKFGEDDYFKC--------IYKKTASLF 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
+ GA A + ER FG +LG +Q+ DD+L+ E K
Sbjct: 180 AISASIGAYTGGADEALAERFSFFGNSLGTAYQIVDDILEFLEVVEGKESK 230
>gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
Length = 280
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 24/234 (10%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
L+ I+ L +++ D L + + + AL GGK++R +
Sbjct: 2 ELLERRRALIEERLVEVVDDLE-------PDALRAEVEHTALAGGKRVRPMVTVLACETV 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A+ G IE +H SL+ DD+ +D +RRG + ++ AI++ +GLL
Sbjct: 55 GGTAEDAVDFGVGIELVHAASLVVDDI--IDRSELRRGTTSAWAEFGYGPAIVSSDGLLG 112
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF + S S + + + G+ ++ E E + + + KT
Sbjct: 113 EAFALFS-----------SDPDATRVVAEAMVELGIGEATELSAEPETEAEYMTLARRKT 161
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GAL A E GAI A + E L + E +G+ FQ+ DD+LD D L K
Sbjct: 162 GALFRAAAELGAIAAGSDAVTVEALGEYAERVGVAFQIRDDVLDAIADPDELGK 215
>gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
20162]
gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
20162]
Length = 326
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 87/221 (39%), Gaps = 17/221 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + ++ + R++ ++ + + + + + A+ GGK+ R
Sbjct: 8 SDEFAAGVRADLARVEQVIAEGIAEADGCV-------IEEALHLFEAGGKRFRPMFTILS 60
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + AA+E H +L HDD+ MD RRG P+ + ++ AI+AG+
Sbjct: 61 GRIGGAMSDQVITAAAAMELTHLATLYHDDV--MDEADARRGAPSANARWGNSIAILAGD 118
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + + + ++ L L+ G+ +Q
Sbjct: 119 YLFARASAFGADLGPRAVG-VIAKCFGELVTGQMLELKGAGESDPVQHY-------LDTI 170
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG+L+ GA+ A ++ +R+ G+ +G+ FQ
Sbjct: 171 WGKTGSLIATCGLLGALHGGAEEDLAQRMYRIGDAIGMAFQ 211
>gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278]
gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
Length = 289
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 12/227 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ RI+ L + A + RL +A++ A+ G ++R L A+ +
Sbjct: 2 DVMARIEKSL---VAAVALAGRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDE 58
Query: 70 LTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A +AIE +HC SL+HDDLP DN +RRG+P+VH + E A++AG+ L+
Sbjct: 59 PAATDAAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALI---- 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ +L + G+ G E E + + KTGAL
Sbjct: 115 -VLAFQTLAKSRCSPLRLARLIETIGDAVGVPHGIAAGQAWECEPEIDLSHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A SGA A + E R GE +G +Q+ADD+ D D
Sbjct: 174 FAAATISGAAAAG--HADPEAWRSLGEKIGEAYQVADDIRDAASDEE 218
>gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 329
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 21/241 (8%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
M+ + + E+ ++I+ + L + + Y + GG K+IR +
Sbjct: 7 MDVKAIQALSHEDMQKINESILAQLNSDVALINQLGF--------YIVQGGGKRIRPLIA 58
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + A+ +E IH SL+HDD+ +D +RRG+ T + ++ +++
Sbjct: 59 VLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVL 116
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ + T AF++++ ++ I + L Q M ++ ++
Sbjct: 117 VGDFIYTRAFQLVAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMR----- 171
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ KT L A ++ AI+A A +++ L+ +G LG FQL DD+LD + L
Sbjct: 172 -VIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALG 230
Query: 236 K 236
K
Sbjct: 231 K 231
>gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis]
gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis]
Length = 445
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 126 LDDELKYFYDDVRDLLQS------GTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 179
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 180 HLNNESHQLVHKQRQVALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 239
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +I+ ++ + SQ++ L +Q + E
Sbjct: 240 YILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 293
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 294 YRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 347
>gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
Length = 318
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+R++ ++ + + + +++ + + GGK++R +V + + +
Sbjct: 6 QRLNGDIEKVEENLRNSVTSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENLI 65
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
++ +AIE +H +LIHDD+ +DN RR TV+ +Y AI G+ L T A +++
Sbjct: 66 QLASAIELLHTATLIHDDV--LDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLAD 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
K I ++ + ++ Q D + KT L +C
Sbjct: 124 IVPANKLTIAARAVKTICEGE------VDQYRDKYVMNLSVPSYLKRISRKTAVLFSASC 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLP 235
GA+ A + L G G++FQL DD D + D
Sbjct: 178 ALGALCAKCNPRITNSLSKLGFYYGVMFQLIDDFRDYKSGDSE 220
>gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG]
gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
Length = 283
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 13/232 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + I+ LD+ L T N L +A+ Y++ GGK++R L+ ++++
Sbjct: 5 LTDWQTAINHTLDEQLA-------TVVNPHLRAAMAYSVDAGGKRLRPLLLLSVVAMYDG 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL AA+E +H YSLIHDDLP+MDN +RRG+PT H Q+ E AI+AG+ LLT A
Sbjct: 58 VVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDA 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F I+S + L + + + G + +D + D + + + KTGA
Sbjct: 118 FAILSQHYPGKGAELVQILAEAAGSSGMVAGQVLD--MDGEQTQYDLATLKQMHQAKTGA 175
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
L+ G++ + ++ L F G+ FQ+ DD+ D +L K
Sbjct: 176 LIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQIKDDINDVTKTTAELGK 227
>gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a]
gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate
synthase, Bifunctional short chain isoprenyl diphosphate
synthase) [Frankia alni ACN14a]
Length = 358
Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 71/255 (27%), Gaps = 28/255 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTECASLF 65
+ + R+ +L + ++ D + A L GGK++R
Sbjct: 1 MTDVRPRVSAVLRRFADARGAALRDIDADLDPFVRVAEDVLLSGGKQVRPAFCYWGWRGA 60
Query: 66 NVNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNG----YIRRGKPTVHIQ 110
+ + S + PS + R
Sbjct: 61 GGPDCDEIVTAAAALEVLHACALVHDDVMDGSQLRRGAPSAQRRLTLVHRRARLGGDPDT 120
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QM 164
+ AI+ G+ LT+A +++ + R+ + + G
Sbjct: 121 FGRSAAILLGDLFLTWADDLLMASGLTPGALARAWPTYARMRGELVAGQYLDLASQVGPG 180
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGII 220
+ + ++ + + GA++A + E FG LG
Sbjct: 181 ASQGGAGGGQVDPARVARIARYKTAGYTVVRPLQLGALLAGSRPGLLETYAAFGHPLGEA 240
Query: 221 FQLADDLLDCEEDLP 235
FQL DD+L D
Sbjct: 241 FQLRDDVLGVFGDPA 255
>gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH]
Length = 297
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++++ ++ L + Q + ++ A GGK++R L+ A +
Sbjct: 1 MEQVNRVIRQSLASDVLLIN-QIAEYIIGA------GGKRLRPALLLLVAGALGEHTSQK 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH +L+HDD+ +D +RRG+ T + + +++ G+ L + +FE++
Sbjct: 54 HVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMV 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
I S+ ++ LQ + D +DE + + + KT L A
Sbjct: 112 GVGKMRVMEILSEATTIISEGEVLQLLNM------HDADVDEARYMQVIRYKTAKLFEAA 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A A + +G +G FQ+ DD LD
Sbjct: 166 ARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 205
>gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 363
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 81/253 (32%), Gaps = 23/253 (9%)
Query: 6 PSKLQENSKRIDTI----LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
S L+E + + LD + L R L GGK+ R+ L+
Sbjct: 4 KSALEELREDVSARACACLDRARELIDFPGDAESLGEFLDPARRLLSGGKRTRAALLAAG 63
Query: 62 -ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + A+ GAA E +LIHDD+ + + V + ++ +G
Sbjct: 64 YACATAEDREPAISAGAAAELYQTSALIHDDILDAASTRRSQPSAHVALARLHLSGGWSG 123
Query: 121 NGLLTYAFEII------------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ I + + R+ + GQ LDI+
Sbjct: 124 DRAHFGTSSAILLGDFLLSLSTEAFADACAQVGPRASRAALRAFARMTTEVAFGQYLDIR 183
Query: 169 DEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
E + + + F GA++A AS + + L G LG FQ
Sbjct: 184 AENAPPAADSVGAALSVVAHKSARYSVVFPLRIGALLAGASGDVLDLLERVGAPLGEAFQ 243
Query: 223 LADDLLDCEEDLP 235
L DD L D
Sbjct: 244 LRDDDLGVFGDEE 256
>gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
Length = 285
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 20/230 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + +++ ++ + Q + + + + GGK+IR ++ + + + ++
Sbjct: 7 EEYRYVESGINSFIDQMDESSLKKMAEHVCN------TGGKRIRPIILLLSSEICSGSYQ 60
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+L AIE +H SLIHDDL +D G +RR P+ ++ A++ G+ L+ FE
Sbjct: 61 QSLNAALAIELMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSRALLCGDYLIAKCFEF 118
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
IS ++ + M + + + KT +L
Sbjct: 119 ISPYGEKVVRDFGKAGMDMAEGEVLDLRLDKDNFGENNYFEC--------IYKKTASLFA 170
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
+ GA A + ER FG LG +Q+ DD+L+ E K
Sbjct: 171 ISASIGAYTGGADEVLAERFNFFGNCLGTAYQIVDDILEFLEVVEGKESK 220
>gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
Length = 326
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 83/222 (37%), Gaps = 8/222 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L + + T N +L A++ A GGK +R A++ +
Sbjct: 11 AINNALGKVNQTINDRI-TIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQE 69
Query: 74 RVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ + + +D+ RRG +V + + TA+ G+ L T F+++
Sbjct: 70 KLIKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLV 129
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T R+ + GQM + D + KT A+ A
Sbjct: 130 ETMTGSAYLTRNARTMRKILTG-----ELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLA 184
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
E GA HA + G+N+GI FQ+ DD+LD D
Sbjct: 185 AEEGAYFGHADHRTINLAKRIGQNIGISFQILDDILDYSGDE 226
>gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
Length = 299
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQH-NDRLLS-AIRYALLGGKKIRSFLVTECASL 64
+ + E K I+ +L ++ + + + + L A+ Y GK IR L
Sbjct: 2 AFIFELPKEINDVLSLIINELGNLLNGVNMPPNLRESAMHYIHNKGKMIRPLLTLITTHT 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N + A+ A+E +H +L+ DD+ +D +RRG T +Y I+A + L+
Sbjct: 62 LGGNLMDAVNPAIAVELVHVATLLQDDI--IDGHLMRRGSETPFKRYGTEYTILASDLLI 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A E KT+ + L L + + ++ I + K
Sbjct: 120 AKAIEYSLKSKTRRITMELTSAALRLAIGQSYELEYKLNGKVDMNIYMR------IIENK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T +L+ A G +A A N LR GE LG +Q+ DD++D
Sbjct: 174 TASLISAAIVLGGYVADADSNTINLLRSLGEKLGAAYQIRDDIIDY 219
>gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 304
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L S +E +I+ L++ L + L++ ++YA+L GGK++R L
Sbjct: 3 ELKSFQKEWLPKINQQLENDLS------MASPDTDLVAMMKYAVLNGGKRLRPLLTLAVV 56
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ F + ++ +V AIE +H YSL+HDDLP MDN RRGKP+VH Y E AI+ G+
Sbjct: 57 TSFGESITPSILKVATAIEWVHSYSLVHDDLPVMDNDMFRRGKPSVHALYGEANAILVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
LLT AF +I++ + L L GG + + +
Sbjct: 117 ALLTGAFGVIATANSSCSVEDCLPTEELLLITQNLAREAGGSGMVLGQLHDMDNHTEEQN 176
Query: 179 --------MIQKMKTGALMCFACESGAIMAHASQNE-------KERLRCFGENLGIIF 221
+ MKT AL+ + GAI+ H + N K+ + FGE G+ F
Sbjct: 177 ASTNRLLNDVYSMKTAALIRYTTTLGAILTHQNVNVEDNHFDPKKAMYDFGEKFGLAF 234
>gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 371
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/245 (20%), Positives = 81/245 (33%), Gaps = 21/245 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFN 66
L + +D L + ++ + RL + R A GGK++R +
Sbjct: 23 LDADLVAVDAALAVFFAERSAAAGDFGHAYRRLWESARDAAEGGKRLRPRFLLSAFHGLG 82
Query: 67 VNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY---------------IRRGKPTVH 108
+R A E +H L+HDDL D R +
Sbjct: 83 APDDRREDAIRTAVAFELLHTAFLLHDDLIDGDTVRRGRPNVAGEFSADALFRGADAPLA 142
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ E A++AG+ LL A + ++ R L + G L L
Sbjct: 143 TVWGESAALLAGDLLLHAASDQLARLDAPAGVRSRLLDALDRAVFVTAAGELADVGLATG 202
Query: 169 DEFIDETQVFMI-QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
V + + + +GA++A AS + L +G +G FQL DDL
Sbjct: 203 MTARGIPDVLAMTEHKTAAYSVSGPLTAGALLAGASDGLLDVLAHYGRLVGAAFQLGDDL 262
Query: 228 LDCEE 232
L
Sbjct: 263 LGVFG 267
>gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium
dendrobatidis JAM81]
Length = 356
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 80/242 (33%), Gaps = 27/242 (11%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE-------CASLFNVNHLTAL 73
LL + + + L + Y GK IR +V A + + T
Sbjct: 21 SLLTENIRKLLGSGHPVLNTISSYYFSKQGKHIRPLVVLLMAQATSITAKMPGSDPFTNS 80
Query: 74 RVGAAIECI-------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
E + ++ +D RR P+V+ ++ AI+AG
Sbjct: 81 GATILPEAVILPTQRRLAEITEMIHTASLLHDDVIDISMTRRNTPSVNAEFGNKMAILAG 140
Query: 121 NGLLTYAFEIISSPKTQLKDN---IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ LL A ++ + ++ LGG
Sbjct: 141 DFLLARASVALARLRDPRVVELLSTVISNLVEGEFMQLRNSALGGSKSAYSAVHDRFQYY 200
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
MKT +L+ +C S A++ + + E +G NLG+ FQL DD++D D
Sbjct: 201 MEKTYMKTASLIAISCRSSAVLGGCTDDVIESAYLYGRNLGLAFQLVDDMMDFTVSSADF 260
Query: 235 PK 236
K
Sbjct: 261 GK 262
>gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
Length = 323
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 86/225 (38%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L +R++ L +L + + GGK++R LV A
Sbjct: 17 QLGSLMERVEQRLTELTAGHGQLLAEHAGTTIA-------AGGKRLRPLLVLLAAGESAA 69
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+R A+E IH SL+HDD+ +D +RRG+PTV A G+ L + A
Sbjct: 70 PTDRLIRSAVAVELIHSASLVHDDV--LDRAPVRRGRPTVFAAAGRTVATATGDLLFSRA 127
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F ++ + ++R+ S G + +KTGA
Sbjct: 128 FAELA--ASGEAADVRALSGASSALAAGELMQRADAWDVGVSLDRYLERCE----LKTGA 181
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L AC GA+ L FG +G+ FQL DD+LD
Sbjct: 182 LFEAACRLGALATAGPDE---ALAAFGRRIGLAFQLLDDVLDVSG 223
>gi|224108643|ref|XP_002314919.1| predicted protein [Populus trichocarpa]
gi|222863959|gb|EEF01090.1| predicted protein [Populus trichocarpa]
Length = 383
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 20/241 (8%)
Query: 11 ENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLV 58
++S ++ LD +L M +L SA Y +G GK+ R ++
Sbjct: 48 QSSSLVEEQLDPFSLVADELSVLANRLRSMVIAEVPKLASAAEYFFKMGVEGKRFRPTVL 107
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A+ NV L + + D + + ++ + + +
Sbjct: 108 LLMATALNVRILET-----TTSGVETTTRGVGDALTTELRKRQQSVAEITEMIHVASLLH 162
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
I S + + + L + D +
Sbjct: 163 DDVLDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNTEDDWCCYCSMEYYM 222
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
KT +L+ +C++ A++A + +G+NLG+ +QL DD+LD L
Sbjct: 223 QKTYYKTASLISNSCKAIALLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSASLG 282
Query: 236 K 236
K
Sbjct: 283 K 283
>gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas
acidaminovorans]
gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas
acidaminovorans]
Length = 303
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + ID L + L + T+ + A+ + GGK+ R L+ +
Sbjct: 13 LQKYFESRFELIDQELKNALTFEDKY-ATELKKAIYEAV---IPGGKRWRPLLLLSMFEM 68
Query: 65 -FNVNHLTALRVG----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
AIE +H +++HDDLPS+ N RRG+P +HI+Y AI+A
Sbjct: 69 LTGFKKHRTFPDALKSSVAIELLHNGAIVHDDLPSVMNRTQRRGQPALHIKYGNAIAILA 128
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L + A+EIIS K + +++ + T + G+ G L + + + +
Sbjct: 129 ADALYSLAYEIISELKNPEQSLEAIRILSNATKSYGMIGGQV-VALSSRHKVMKINTLNY 187
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
I K G+L+ + + +++ A + + +R + NLGI +Q+ +D+
Sbjct: 188 IDMKKVGSLLQASADIACLLSRADEETHQVMRAYALNLGIAYQMIEDI 235
>gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
Length = 325
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 85/238 (35%), Gaps = 16/238 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
+ + + + + + + + + Y + GK++R V
Sbjct: 3 ITSQIKQPIIAEMELFEKKFHESMTSKVALLNRITY--------YIVNRKGKQMRPMFVF 54
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + + A ++ +D+ RRG +++ + A++
Sbjct: 55 LTAKMVSGGTVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLV 114
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL+ + I S + ++ LQ ++ +D + +
Sbjct: 115 GDYLLSKGLLLSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDITEDVYYE------ 168
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PK 236
I + KT L+ C GA + E +R FGE +G+ FQ+ DDL D E+ K
Sbjct: 169 IIRKKTATLIAACCALGAKAVIEDDVQVENMRMFGELIGMAFQIKDDLFDYSEEAIGK 226
>gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
Length = 343
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-----------GKKIRS 55
+++Q+ I+ L + + +S++ L++A +G GK++R
Sbjct: 4 NEIQKFLLIIENKLQENWNKFSSNISI----HLITAYHMGWVGEDLTPLANIRRGKRLRP 59
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
AL +G+AIE +H +SL+HDD+ D R G+ TV + E
Sbjct: 60 LFCVLVNQTLGGFLDDALEIGSAIEFLHNFSLVHDDIQ--DRDEKRHGRWTVWKIWGEAQ 117
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI G+ L F+++++ K+ + + + + + L +D +
Sbjct: 118 AINVGDLLFNMVFQVLTNLKSPVLLSKSLKELTETIRELIEGQYLDISFEKRKDISL--K 175
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ M+ KT L + GA A ++ + + G + G+ FQ+ADD + D
Sbjct: 176 EYLMMIDKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGDPE 235
Query: 236 K 236
K
Sbjct: 236 K 236
>gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
Length = 325
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 7/210 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+L Q L Y + GK++R V A + N ++ A
Sbjct: 16 ELFEQKFQLSMASKVALLNRITHYIVNRKGKQMRPMFVFLVAKMMNNGEVSERTYRGASV 75
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
++ +D+ RRG +++ + A++ G+ LL+ +
Sbjct: 76 IELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLIGDYLLSKGLLLSIDNNDFDLL 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I S + ++ LQ Q+ + + D I + KT L+ C GA
Sbjct: 136 KIISVAVREMSEGELLQIEKARQLDITEAVYYD------IIRQKTATLIAACCSLGAASV 189
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ E E +R FGE +G+ FQ+ DDL D
Sbjct: 190 KPNSPEVESMRKFGELIGMAFQIKDDLFDY 219
>gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y]
Length = 303
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
+ S I+ LD LL + D + +A+R AL GK+IR L+ A
Sbjct: 13 IHSDAASLLNDIEQRLDQLLPVESER------DLVGAAMRDGALATGKRIRPLLLLLAAR 66
Query: 64 LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N A + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A
Sbjct: 67 DLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAV 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
LL+ AF ++++ + R+ + L+H +G+QG++ GQ D D+ + M
Sbjct: 127 ALLSKAFGVVAAAEGLTAT-TRADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILM 185
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
KT L C + + +I+A AS +E+L F NLG FQL DDL D D K
Sbjct: 186 TNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242
>gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Dictyoglomus thermophilum H-6-12]
gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
[Dictyoglomus thermophilum H-6-12]
Length = 343
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 15/229 (6%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIRSFLVTECASLFNV 67
I+++ L + S T L++A + GK++R N
Sbjct: 12 IIENKLQENWSKFSTNIPIHLITAYHMGWVDEDLIPITNIRRGKRLRPLFCVLVNQTLNG 71
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
AL +G+AIE +H +SL+HDD+ D R GK TV + E AI G+ L
Sbjct: 72 VLDDALEIGSAIEFLHNFSLVHDDIQDQDEK--RHGKWTVWKIWGEAQAINVGDLLFNMV 129
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++++ K+ L + + + + L +D + + M+ KT
Sbjct: 130 FQVLTNLKSPLLLSKSLKELTETIRELIEGQYLDISFEKRKDISL--KEYLMMIDKKTAK 187
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L + GA A + + + G N G+ FQ+ADD + D K
Sbjct: 188 LFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGDPEK 236
>gi|260906389|ref|ZP_05914711.1| putative geranylgeranyl pyrophosphate synthase [Brevibacterium
linens BL2]
Length = 354
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 20/253 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLV 58
M + S L + + L +L + L ++ + GGK IR L+
Sbjct: 1 MTDSITS-LDDIAFSFQDRLVQVLTDARHRSRGVSAQYGQLWDSLTHMATGGKLIRPRLL 59
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------- 110
+ A A + +L+ D ++ R
Sbjct: 60 LDAHRGLGGRDQAAAVDAACAMQLLHIALVIHDDVIDNDTIRRGEANISGEFASDALCRG 119
Query: 111 --------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
+ + TA++ G+ +LT A +++ + + T G
Sbjct: 120 AGRREAQVWGDATALLGGDLMLTLAHSLLARLEVDDSKRRAILDIFDDTLFRSAAGEHSD 179
Query: 163 QMLDIQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
L + E +V + + A++A AS + L +GI++
Sbjct: 180 VWLSLHLEEARSQEVLEMAGQKTAVYSFQAPLLIAAVLAGASSTQTAELAAIAAQIGIVY 239
Query: 222 QLADDLLDCEEDL 234
QL DD+L D
Sbjct: 240 QLRDDVLGLFGDE 252
>gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 304
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
L S +E +I+ L++ L M + D L++ ++YA+L GGK++R L
Sbjct: 3 DLKSFQKEWLPKINQQLENDLS-----MASPDAD-LVAMMKYAVLNGGKRLRPLLTLAVV 56
Query: 63 SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ F + ++ +V AIE +H YSL+HDDLP+MDN RRGKP+VH Y E AI+ G+
Sbjct: 57 TSFGESITPSILKVATAIEWVHSYSLVHDDLPAMDNDMFRRGKPSVHALYGEANAILVGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--- 178
LLT AF +I++ + L L GG + + +
Sbjct: 117 ALLTGAFGVIATANSSCSVEDCLPTEELLLITQNLAREAGGSGMVLGQLHDMDNHTEEQN 176
Query: 179 --------MIQKMKTGALMCFACESGAIMAHASQNE-------KERLRCFGENLGIIF 221
+ MKT AL+ + GAI+ H + N K+ + FGE G+ F
Sbjct: 177 ASTNWLLNDVYSMKTAALIRYTTTLGAILTHQNVNVEDNHFDPKKAMYDFGEKFGLAF 234
>gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
43160]
gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
43160]
Length = 352
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 16/230 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
G L +L R++ L + ++ +A GGK+ R L A
Sbjct: 34 GDLGVRLAAGLGRVEEALRTAVGSEHQFVRE-------AAGHLVAAGGKRFRPLLALLAA 86
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + + E H +L HDD+ MD +RRG P+ + ++ AI+ G+
Sbjct: 87 ELGDPHGQGVTEAAVVCELTHLATLYHDDV--MDEAVVRRGAPSANSRWSNSIAILTGDF 144
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L A ++++ + +T I + + Q +
Sbjct: 145 LFARASDLLADLGPEAVRIQARTFERLVTGQIR-------ETVGAQPGDDPVDHYLDVLA 197
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+L+ + GA A L FGE +G+ FQL+DDLLD
Sbjct: 198 DKTGSLVATSARFGASFAGVDAELVTALTAFGEEVGVAFQLSDDLLDIVS 247
>gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 318
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+++L+L A + A GGK++R L A +F + + A
Sbjct: 9 ADVNELILSKAGSNVDLIPEI---AKHLISSGGKRLRPMLTLAFADMFGYQGSGHVILAA 65
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
++E +H +L+HDD+ +D +RRGK + +++ G+ LL AF+++ +
Sbjct: 66 SVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDTGSL 123
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
I S+ + LQ ++ E + + + KT AL A E G
Sbjct: 124 EALRILSEASAIIAEGEVLQL------GASKNIETTEAEYLRVIEAKTAALFAAAAEVGP 177
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A + ++ R +G LG FQ+ DD LD DL K
Sbjct: 178 EIAGQNDVMRKAARTYGLELGYAFQMVDDALDYGGSSADLGK 219
>gi|148235461|ref|NP_001090113.1| farnesyl diphosphate synthase [Xenopus laevis]
gi|76779745|gb|AAI06511.1| MGC131256 protein [Xenopus laevis]
Length = 348
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 71/252 (28%), Gaps = 16/252 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
MN + S+ QE S + I+ DL + H + RL + Y GGK R V
Sbjct: 1 MNSHMGSERQEFSSYFEQIVQDLTSEDLGHPEVGDAITRLKEVLEYNTPGGKCNRGVTVL 60
Query: 60 ECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ L+ A+ + + E
Sbjct: 61 ASYKELVGPELQKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRGQPCWYRKEGIG 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQ 168
+ A N I + + +L L Q +
Sbjct: 121 LDAVNDSFLLEAGIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKVDL 180
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDL 227
+ + ++ +++ + MA A + E + + +G FQ+ DD
Sbjct: 181 NRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIAGEAEHKNAKTILLEMGEFFQIQDDY 240
Query: 228 LDCEED---LPK 236
LDC D K
Sbjct: 241 LDCYGDPSVTGK 252
>gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 380
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 83/252 (32%), Gaps = 26/252 (10%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L++ L+ L + D + +R+ L GGK++R L
Sbjct: 30 SALEASLKDY-------LERRLRDSEDLDGDFGRDLAGTTVRFTLGGGKRMRPLLAWWGW 82
Query: 63 SLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSM----DNGYIRRG 103
+ + S PS+ + R G
Sbjct: 83 LAGGGAPSGETARAARQACAAVELVQTCALVHDDVMDGSPTRRGRPSVHAAHALEHERDG 142
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+Y E A++ G+ L +A ++++ + + +R++ + + G
Sbjct: 143 HVGDSRRYGEALAVLVGDLALVWADDMLNEALPGVPEPVRARAVWRDLRTEIMAGQFLDV 202
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ E +E + + + GA MA A LR +G ++GI FQL
Sbjct: 203 RAQARRERSEEAALRVDLLKTASYSVERPLHLGAAMAGADPAAVGALRGYGRDVGIAFQL 262
Query: 224 ADDLLDCEEDLP 235
DDLL D
Sbjct: 263 RDDLLGVYGDSS 274
>gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 321
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 27/221 (12%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN---------------HLTALRVGAA 78
+L SA Y +G GK+ R ++ A+ NV L + A
Sbjct: 7 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRTRQQCIA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +D+ RRG +++I A++AG+ LL+ A ++S K
Sbjct: 67 EITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTE 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
++ + ++ L +Q + + + KT +L+ +C++ A+
Sbjct: 127 VVSLLATVVEHLVTGETMQMTSTSEQRVSMEYY------LQKTYYKTASLISNSCKAIAL 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A + +G+NLG+ FQL DD+LD L K
Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGK 221
>gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421]
gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421]
Length = 399
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 13/243 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQT----------ASHMQTQHNDRLLSAIRYALLGG 50
M+ +LQ + + L + + Q + + L L GG
Sbjct: 56 MSEEFAQRLQRIEEALYAALPEYIDQDWVNLSFSDIPEAVLPRHILPLLKPCKDLVLRGG 115
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
K+ R + A L + A + IE IH SLIHDD+ D+ RRG P +HIQ
Sbjct: 116 KRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIE--DSAETRRGAPAIHIQ 173
Query: 111 YDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
Y TAI A + L +A II + P + + + N+ L + +
Sbjct: 174 YGTDTAINAASWLYFHAMSIINAYPSSSELKLSLYRTVNKNLTNLHLGQAMDIDWHRNSN 233
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + +KTG+L A E G + A + E+ E++GI FQ+ DD +
Sbjct: 234 FIPSRAEYMAMIALKTGSLARLAAEIGFLAGGAGEEATEQYGKTMESIGIGFQILDDAKN 293
Query: 230 CEE 232
Sbjct: 294 ITG 296
>gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
35580]
gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
35580]
Length = 334
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 87/242 (35%), Gaps = 11/242 (4%)
Query: 1 MNGGLPSKLQENSKRIDTILDD-LLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFL 57
MN +L +I+ L L + + LLSA GGK+ R L
Sbjct: 1 MNDEFTQRL----AKIECALHSAFLPDMPNAASELNPIALLSAPCASLVAGGGKRWRPLL 56
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L + + IE IH SLIHDD+ DN +RRG+P H+ Y +A+
Sbjct: 57 AVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIE--DNSELRRGQPAAHVAYGLDSAL 114
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EFIDETQ 176
+G+ L A + + + + +G F
Sbjct: 115 NSGSWLYFQALGSLEAYRAPANVKLDLYAAALTHIRALHEGQALDIHWHRTAGFFPSRKD 174
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLP 235
+ ++KTGAL A +G A + E E G+ FQ+ DD + +
Sbjct: 175 YERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFEAAGVGFQILDDAKNISAGNAG 234
Query: 236 KK 237
KK
Sbjct: 235 KK 236
>gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 349
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 81/223 (36%), Gaps = 16/223 (7%)
Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYS 86
+++ + + D + + + L GGK++R L + +A+E +H +
Sbjct: 21 AYIGSDYEDLVAALEDFVLNGGKRLRPAFAYWGWRAVATGEPDSEVLLLFSALELLHACA 80
Query: 87 LIHDDLPSMDNG--------------YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L+HDD+ + R ++ AI+ G+ L++A +I+
Sbjct: 81 LVHDDVIDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSWADDIVF 140
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ R Q + + L G + + + + + +
Sbjct: 141 RAELSPGAARRVQRVWAEIRTEVLGGQYLDIVAEASGAESIASAMNVDTYKTACYTVSRP 200
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA A + ++ FG ++G+ FQL DD+L D
Sbjct: 201 LQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVLGVFGDPA 243
>gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni]
gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni]
Length = 449
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 130 LDDELKYFYDDVRDLLQS------GTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 183
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 184 HLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 243
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +I+ ++ + S+++ L +Q + E
Sbjct: 244 YILSIASIMIARLRSDDVTIVLSKILTDLVQGEFMQL------GSRETENERFAHYLTKT 297
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 298 YRKTASLIANALKATAVIAQADDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTE 351
>gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1]
gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1]
Length = 295
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 22/231 (9%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
E + ++ + + + + L + + GGK+IR ++ + + + ++
Sbjct: 17 EEYRYVEAGIKE-------SITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSY 69
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+L A+E +H SLIHDDL +D G +RR P+ ++ A++ G+ L+ +
Sbjct: 70 SRSLNAALAVEMMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIA 127
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
IS ++ + M + + + KT +L
Sbjct: 128 FISPYGEKVIQDFGKAGMDMAEGEVLDLKLEDESFGENDYFKC--------IYKKTASLF 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
+ GA A + ER FG LG +Q+ DD+L+ E K
Sbjct: 180 AISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVVEGKESK 230
>gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 328
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
LQ +K + LD + +++ + + L GK+IR ++ A L
Sbjct: 8 LQFITKPVQKELDAF-DKLYTNILHVPISEFQYMLNFILKKKGKRIRPIILILSAKLCGE 66
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + +E +H +LIHDD+ +DN +RRG P+V ++ A++ G+ +L+
Sbjct: 67 PTIKTIEYAVILELLHVATLIHDDV--VDNAVLRRGNPSVMAKFGNQAAVLLGDYILSK- 123
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + N +L+ +G L + + + I + KT
Sbjct: 124 ----AIKQGIETKNFAILQVLTHLAQNLCEGELTQLIFSSKKIIDENHYFE-IIRKKTAI 178
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L + GA+ +A + + L+ GE LGI FQ+ DDLLD D K
Sbjct: 179 LFSVCSKIGALSVNADVKKNKTLQLIGEYLGICFQIRDDLLDYL-DSEK 226
>gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae]
gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae]
Length = 441
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 122 LDDELKYFYDDVRDLLQS------GTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINY 175
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 176 HLNKESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 235
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +I+ ++ + SQ++ L +Q + E
Sbjct: 236 YILSVASIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 289
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 290 YRKTASLIANALKATAVIAQAEDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTE 343
>gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix]
Length = 318
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 3/214 (1%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ + DRL A + + GGK++R + A + A + A
Sbjct: 2 LIDHYIMDFMSITPDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASI 61
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ MD +RRG PT H+ Y + AI+AG+ L AF++I+ + +
Sbjct: 62 ETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSH 121
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIM 199
++ + +Q G + +E D + ++KTGAL+ A GA+
Sbjct: 122 EQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVA 181
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A A ++ + G N GI FQ+ DD+L D
Sbjct: 182 AGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGD 215
>gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi]
gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi]
Length = 437
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 91/239 (38%), Gaps = 21/239 (8%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+ S ++D L L+ + + L +A +Y GK R LV N
Sbjct: 112 KTISLQVDGDLK-LIGEEILDSVKSDHPVLDAAAKYFFNTPGKLFRPMLVLMTGRAVNEQ 170
Query: 69 HLTALRVGAAIECIH-------CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + +D+ RRG P ++ A++AG+
Sbjct: 171 TEISDLETIMRKQRKLAETTELIHVASLIHDDIVDDADTRRGIPALNKNVGNKVAVLAGD 230
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A ++ ++ S ++ L + LQ G++
Sbjct: 231 FLLGRASINLARIGNIESIDLISTVIEHLAYGEVLQMAGKGKLD--------FDYYMKTI 282
Query: 182 KMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +L+ +C++ A+++ + ++ + FG+++GI +QL DD LD + DL K
Sbjct: 283 FFKTSSLIANSCKASAVLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGK 341
>gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
Length = 289
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
+ KRID L+ + + + A+RY++ GG +IR L A
Sbjct: 2 DLQKRIDRNLEQAITF---ATAGGNPSIICDALRYSVFPGGARIRPRLCLAVALAEGDEA 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AIE +HC SL+HDDLP D+ RRGKP+VH + E TA++AG+ L+ AF
Sbjct: 59 PSASNAAATAIELLHCASLVHDDLPCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E I+ D ++ + GM G + E + + + KT +L
Sbjct: 119 ETIARECLATPD----RIAPLIGVIGRAVGMPHGIIAGQAWESEKSIDLKVYHRAKTSSL 174
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +GAI A A + GE LG FQ+ADDL D
Sbjct: 175 FIGSTTAGAIAAGADP---QNWYRLGEALGDAFQVADDLRDFAS 215
>gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1]
gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1]
Length = 303
Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 10/231 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
I+ LD LL + D + +A+R AL GK+IR L+ A +
Sbjct: 18 ASLLNDIEHRLDQLLPVESER------DLVGAAMREGALAPGKRIRPLLLLLAARDLGCS 71
Query: 69 HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A + A+E +H SLI DD+P MD+ +RRG+PT+H QY E AI+A LL+
Sbjct: 72 ATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSK 131
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKT 185
AF +++ + + + G + + ++ KT
Sbjct: 132 AFGVVAMAEGLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKT 191
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C + + +I+A + +E+L F NLG FQL DDL D D K
Sbjct: 192 STLFCASMQMASIVAETPKEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242
>gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica]
Length = 412
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAA 78
L DL + L Y G GK R +V A NV+H + A+
Sbjct: 100 LTDLYEDIKKELLVST-TELKEMCEYYFDGRGKAFRPIVVVLMARACNVHHNNCRDMQAS 158
Query: 79 IECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
I ++ +D+ RRGK TV+ + E A++AG+ +L+ A ++
Sbjct: 159 QRSIALIAEMIHTASLVHDDIIDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASVALAR 218
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ +Q++ L + + G + + F + KT +L+ +C
Sbjct: 219 IGNTTIVSVLTQVIEDLVRG---EFLQLGSKENENERFAHYIEKTF---KKTASLLANSC 272
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ +I+ E +G+N+GI FQL DD+LD
Sbjct: 273 KAVSILGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFTS 311
>gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
Length = 354
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 88/237 (37%), Gaps = 9/237 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
++ + + L + + L + + + L I L GGK+ R+ +
Sbjct: 12 VDDAIETLLPRDID--EAYLVEWFGPASHRYDPDAIQRALSDPIWDLLDRGGKRWRAVVC 69
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F + L E +H ++I DD+ D IRRG+P +H ++ A+
Sbjct: 70 LLLLDGFGADPRAYLPYACIPEVLHNGTIIVDDVE--DGAEIRRGEPALHHRFGPDIALN 127
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDET 175
AGN + ++I L + L + + G +D + E
Sbjct: 128 AGNAMYFLPLKVIGKNPADLDPETQLATYEMLMDELNRTHLGQGMDIYWHRNRDATVAEA 187
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + KTG L AI+ + + + E++ I FQ+ DD+LD E
Sbjct: 188 EYLEMCACKTGCLGRIVARLAAIITDQPPEVEREVAAYAEDMSIAFQIGDDILDVES 244
>gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 334
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 14/232 (6%)
Query: 3 GGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ L + + LD +++Q A + +DRL++ GK+IRS L+
Sbjct: 6 ADFKAVLSQARDLVKVELDKTEQVIMQVAKNAPAGISDRLVT---LFSRKGKRIRSTLLC 62
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A+ RV A + L +D +RRG+ T H ++ A++
Sbjct: 63 LLAN-CGAQKPDIDRVAHACAAVELLHLASLVHDDIIDGTDVRRGQKTAHREWGTQVAVL 121
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ +L+ + + + + I S L ++ G M + + +
Sbjct: 122 IGDYVLSQSMRCVIDEQARNIPVIISDAADKLIIGEIMELDHCGDMSLSRKSYNE----- 176
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I KT AL+ A G I+A Q + G + GI FQ+ DDLLD
Sbjct: 177 -IIDGKTAALIDAAARIGGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLDY 227
>gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C]
gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C]
Length = 290
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 63/182 (34%), Gaps = 4/182 (2%)
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD-DLPSMDNGYIRRGKPTVHIQYDE 113
LV A A + +D RRG+PT +
Sbjct: 10 PALVLVSARALGAPAEAVRGAVRAAAAVELAHNFTLLHDDIIDRDVRRRGRPTAWTVFGT 69
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+AG+ ++ A +++ ++L + Q + +
Sbjct: 70 PHAILAGDAMMALALRLLAEDPHPASARASARLAACVVELCEGQ---QADCAFEERAHVS 126
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + KTGAL+ AC GA+ A A E E + FG G+ FQL DDL+ D
Sbjct: 127 LDECLTMAAAKTGALLGCACALGALYAGAGPEEVEAVDAFGREAGLAFQLIDDLIGIWGD 186
Query: 234 LP 235
Sbjct: 187 PG 188
>gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis]
gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis]
Length = 435
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 116 LDDELKYFYDDVRDLLQS------GTSQPELDTIACYYFDGQGKALRPMVTMLMAKALNY 169
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 170 HLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 229
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +IS ++ + SQ++ L +Q + E
Sbjct: 230 YILSIASIMISRLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 283
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 284 YRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 337
>gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 358
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 68/246 (27%), Gaps = 21/246 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + L Q + L+ R GGK++R
Sbjct: 15 AFRDAVGARVGLFLDQIDEELAPVSPLMSELVGLARRFTAGGKRLRPAFCFWGHVAAGGA 74
Query: 69 HLTA-------------LRVGAAIECIHCYSLIHDDLP----SMDNGYIRRGKPTVHIQY 111
+ + S +P ++ + R G +
Sbjct: 75 PADPTALLDATAGFELLHVAALVHDDLIDDSDTRRGMPAAHRQLEELHHRGGGVGDPAAF 134
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQD 169
AI+ G+ L ++ + ++ R++ +L T Q + +
Sbjct: 135 GRAGAILLGDLLTAWSTQRFATAGLDPAAFARARWVLDAVRTDVNVGQFLDLAAEGGLAG 194
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
T +++ + + GA +A A + L G +G FQ DDLL
Sbjct: 195 GAGLATAEQVVEYKTARYTVIRPLQFGAALAGAPAQLLDGLAHVGSAVGRAFQFRDDLLG 254
Query: 230 CEEDLP 235
D
Sbjct: 255 VFGDEE 260
>gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 84-25]
gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 84-25]
Length = 297
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLEEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus lugdunensis HKU09-01]
gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase)
[Staphylococcus lugdunensis HKU09-01]
Length = 260
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 4/197 (2%)
Query: 43 IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
++Y++ GGK++R L+ + N ++ L AA+E IH YSLIHDDLP+MD+ R
Sbjct: 1 MQYSINAGGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RGK T H + E A++AG+ LLT AF++IS TQL ++I+ +L+ L G GM+G
Sbjct: 61 RGKLTNHKVFGEWKAVLAGDALLTKAFDVIS-NDTQLDNDIKVKLIQRLAFASGHLGMVG 119
Query: 162 GQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
GQ + + + +D + + I + KTGAL+ FA + +A +++ E L F ++LG+
Sbjct: 120 GQALDMQSETQAVDISTLEQIHRAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGL 179
Query: 220 IFQLADDLLDCEEDLPK 236
+FQ+ DDLLD + K
Sbjct: 180 MFQIKDDLLDVYGEESK 196
>gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 323
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 10/218 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL + K I L + + MQ+ L Y + GK++R V A L
Sbjct: 3 KLNDIQKPIANELAAFEHKFKASMQSSVP-LLDRITHYIVKRKGKQMRPMFVFFSAGLCG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + R + +E +H SL+HDD+ +DN RRG +V+ + A++ G+ LL+
Sbjct: 62 SINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNALWKNKVAVLVGDFLLSK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ I S+ + ++ LQ ++ + + + + + KT
Sbjct: 120 GLLLSVDNNDFHLLKIVSEAVEQMSEGELLQIEKARKLDIEESVYFE------VIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+L+ C GA + +++ FGE +GI FQ+
Sbjct: 174 SLIASCCACGAASTDVDEETVKKMHAFGEKVGIAFQIK 211
>gi|221132081|ref|XP_002160031.1| PREDICTED: similar to farnesyl diphosphate synthase (farnesyl
pyrophosphate synthetase, dimethylallyltranstransferase,
geranyltranstransferase) [Hydra magnipapillata]
Length = 477
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 15/248 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
L S++ ++ D I ++++ + T+ L A+ Y GKK R +V
Sbjct: 131 DLSSRILVYQEKFDLIFENIIKELVEVDAQNPQITEAAHSLRDALSYNAFDGKKSRGMMV 190
Query: 59 TEC------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP--TVHIQ 110
++ N AL +G +E + L+ DD+ + ++
Sbjct: 191 ICSLDFLKNGNVTNSEVDKALCLGWCVEILQAVFLVADDIMDRSEIRRGKPCWYKKCGLR 250
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
T ++ ++ P ++ L + +
Sbjct: 251 AINDTYLMEQCIYALIDKHFMNEPYLVDLYKSFHRITYLTAMGQELDMLASEPNGNFTIR 310
Query: 171 FIDETQVFMIQKMKT-GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLL 228
E + I K KT G I+A+ + LG +FQ+ DD L
Sbjct: 311 NFTEDKYKSIVKYKTAYYSFYLPVSLGMILANIKDMKLYAEVENILMKLGELFQIQDDYL 370
Query: 229 DCEEDLPK 236
DC D K
Sbjct: 371 DCYGDPAK 378
>gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta]
gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta]
Length = 436
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+D L +++ + L + Y G GK +R + A N +
Sbjct: 117 LDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 176
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +S +D RRGKP+V+ ++ +AG+ +L+ A
Sbjct: 177 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA 236
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ ++ + SQ++ L +Q + E KT +
Sbjct: 237 SIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTAS 290
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 291 LIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 338
>gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
Length = 365
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 29/263 (11%)
Query: 1 MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSF 56
M+ + L E ++RI + L ++ + + + + Y L GGK++R+F
Sbjct: 1 MDNYME--LLEFARRITNEALREVFDTVDAEARGVSSKVVDIPFISRDYTLRGGKRLRAF 58
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYS-LIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV + + V + I + MD IRRG PTVH+ +D+
Sbjct: 59 LVLIGYWSRKWGYGSIDSVKYLMAGIEFLQSYLLVHDDIMDEDEIRRGGPTVHVWFDKKC 118
Query: 116 ------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ + Y + S T+L + L T+ G++ + GQ
Sbjct: 119 REGGLIGRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYALKELIKTYTRGIRLVAYGQ 178
Query: 164 M-----LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMA-HASQNEKERLRCFGEN 216
+ + + E V+ I + GAI + + L +
Sbjct: 179 FLDVLIANTPLQKVSEDDVYNIHLLKTASYTVELPLHLGAIASLMYDKELLTELSQYALP 238
Query: 217 LGIIFQLADDLLDCEED---LPK 236
GI FQL DD+L D K
Sbjct: 239 AGIAFQLQDDILGLYGDPKVTGK 261
>gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
Length = 350
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 19/221 (8%)
Query: 29 SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
H ++ +L Y L GGK+IR+ L+ + + ++ +++E I Y LI
Sbjct: 30 EHWSSREACEILE--EYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLI 87
Query: 89 HDDLPS--------------MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
HDD+ + +++ G I++ E AIIAG+ YA EI+SS
Sbjct: 88 HDDIMDESDLRRGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSSS 147
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ +++ L+ G + +EF +E + + + +
Sbjct: 148 DFPAELKVKAIHKLNEIIEYTGYGQIIDIYSGALEEFKEEDLLLLHKYKTARYTIEGPLA 207
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G I+A E + +GI FQL DD+L
Sbjct: 208 LGIILAGKEPEGIE---NYAIPVGIAFQLQDDILGLFGSEE 245
>gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92]
gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Campylobacter curvus 525.92]
Length = 300
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 116/241 (48%), Gaps = 25/241 (10%)
Query: 18 TILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
T+LD+ + +++ + A+ L GGK R+ L+ A+
Sbjct: 2 TLLDEFIKFLNANLPKAPSFHPYYEEALGVMLKAGGKHFRAQLLLGVVDALRPQLTQNAM 61
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
RV +E +H YSLIHDDLP+MD+ +RRG PT+H +YDEVTAI+AG+ L T AF IS
Sbjct: 62 RVALGLEMMHTYSLIHDDLPAMDDAPLRRGVPTLHTRYDEVTAILAGDALNTQAFYEISR 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------------------- 174
+ + + L+ N G GM+ GQ LD E D+
Sbjct: 122 ADLEAPV--VVKCVEILSANAGASGMVLGQALDCFFENSDKADVKNAKNRLGLAQKRLNL 179
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + KT L+ + E GA++A + ER+ G +LG+ FQ+ DDL+D D
Sbjct: 180 DELEFLHIHKTAKLIAASLEMGAVIAALDAAQCERIYGIGLDLGLAFQIEDDLIDATSDE 239
Query: 235 P 235
Sbjct: 240 S 240
>gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 326
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 22/235 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L+ N + ++++ + + N+ + S GGK +R C+ +
Sbjct: 12 ELKTNLSSVLSLIESHVRVRDKTVAATINNLVHS-------GGKLLRPAYSLLCSQI-GP 63
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ V A + +D+ R T+H + AI +G+ L +
Sbjct: 64 DSEKEKAVAVAAAIEAIHMASLVHDDVIDDADTRHNHATIHTMHGNKFAIYSGDYLFCIS 123
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QKMK 184
F+I++ + L + G++ +L G++ + F V K
Sbjct: 124 FQILAQHASSLAH--------LDFNTRGMEKILAGELDQLNSRFKPSLSVKSYLSRVAGK 175
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T L +C SGA+ A++ + G +G+ FQ+ DD+LD + L K
Sbjct: 176 TAQLFAISCYSGAMEGGATRKQAMNAWNMGHYIGMTFQIMDDILDFKGSSHCLGK 230
>gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans]
gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans]
Length = 307
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-- 64
+++ + ID L LL +T S D + A+R + GK+IR L+ A
Sbjct: 14 EIEVMRQSIDDHLAGLLPETDSQ------DIVSLAMREGVMAPGKRIRPLLMLLAARDLR 67
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + T L + A+E H SL+ DD+P MDN +RRG+PT H ++ E AI+A GLL
Sbjct: 68 YQGSMPTLLDLACAVELTHTASLMLDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLL 127
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
+ AF +I++ R+Q + L+ +G+QG++ GQ D+ D +
Sbjct: 128 SKAFGLIAATGDL-PGERRAQAVNELSTAVGVQGLVLGQFRDLNDAALDRTPDAILSTNH 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+KTG L + AI + +S + +E L F + G FQL DDL D
Sbjct: 187 LKTGILFSAMLQIVAIASASSPSTRETLHAFALDFGQAFQLLDDLRD 233
>gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp.
jejuni M1]
gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 297
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLEEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFTSIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22]
gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22]
Length = 299
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 27/229 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + + ++ + + D+L + GK +RS L+ + +N
Sbjct: 2 EELELVKNQIEKFVEVCNYEKSLELLDKLAT--------GKMLRSKLIL---KIAGINEE 50
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ ++ +D RRG+P+V+ YD T+I+ G+ L + AF
Sbjct: 51 SIKLCAIVE---MIHAASLLHDDVIDEADTRRGQPSVNALYDNKTSIMFGDILYSRAFTE 107
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S ++ +I + + L + + Q T+ + KT +L+
Sbjct: 108 LSQMDKRVAYHISNAVTLLSIGEMM-------DVDLTQSFNTSYTKYLDMIYKKTASLIE 160
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S AI+ + + + +G+NLG+ FQ+ DD+LD +D L K
Sbjct: 161 ASARSAAILVNLDEE---KYATYGKNLGLAFQMIDDILDITQDSKTLGK 206
>gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The
Methanosarcina Mazei
Length = 295
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
E + ++ + + + + L + + GGK+IR ++ + + + ++
Sbjct: 9 EEYRYVEAGIKE-------SITLIEDPGLKKXVEHVCHSGGKRIRPIILLLVSEICSGSY 61
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+L A+E H SLIHDDL +D G +RR P+ ++ A++ G+ L+ +
Sbjct: 62 SRSLNAALAVEXXHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIA 119
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
IS ++ + + + + KT +L
Sbjct: 120 FISPYGEKVIQDFGKAGXDXAEGEVLDLKLEDESFGENDYFKC--------IYKKTASLF 171
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
+ GA A + ER FG LG +Q+ DD+L+ E K
Sbjct: 172 AISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVVEGKESK 222
>gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 297
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 305]
Length = 297
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis]
gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis]
Length = 427
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 15/217 (6%)
Query: 29 SHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECI 82
H + L Y G GK IR +V A+ N + + AA+
Sbjct: 123 KHELNTSVETLQRVSHYYFDGKGKYIRPRIVLLMAAATNYHSHRSRVILHDQETAAMISE 182
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D RRGK +++ Y + I+AG+ +L+ I+ +
Sbjct: 183 MIHTASLIHDDVIDRADTRRGKVAINLMYGDKNCILAGDYILSRVSLAIARFGNVEAVKL 242
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++++ L +Q ++ T KT +L+ C++ ++ +
Sbjct: 243 LAEIVDELVRGEFMQL------GSKENPDERFTHYLKKTYKKTASLIACCCKTAVLLGDS 296
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ ++ +G N+GI FQL DD+LD ++ K
Sbjct: 297 PPDIQDIAFQYGRNVGIAFQLVDDVLDFVSSKQEMGK 333
>gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
Length = 347
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 6/233 (2%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + + ++ + + + H+ + + S GK IR LV
Sbjct: 10 MRLRIQAAMRAAFPQAEDRVARFYAMQEYHLGWRDEQLVASESD----PGKLIRPQLVLL 65
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN-GYIRRGKPTVHIQYDEVTAIIA 119
+ A+ + A I+ +H ++LIHDD+ + R + + A
Sbjct: 66 ACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIEDDSDMRRGRPTLWHLWGLAQGINAGDG 125
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ A +S + + +G +
Sbjct: 126 MFVIAHLAIHQLSDLGVPAERVLPILRRFDEVILHVCEGQFLDISFEGNLGIST-EDYLA 184
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT L+ + GA++A A L FG +LG+ FQ+ DD+L
Sbjct: 185 MIGRKTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQIEDDILGIWG 237
>gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 369
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 78 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 135
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T T + L +
Sbjct: 136 KVHGPAQAILVGDALFALANEILLELDTVEAGR---ATRRLTTATLRLIDGQAQDISYEH 192
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 193 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLL 252
Query: 229 DCEEDLP 235
D
Sbjct: 253 GIWGDPE 259
>gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG]
Length = 312
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +R++ + Q + +Q Q N GGK +RS L+ A
Sbjct: 5 QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + GAAIE +H +L+HDD+ +D+ IRRG TV + AI AG+ L
Sbjct: 54 DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 111
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + Q KT A
Sbjct: 112 FQLLSEQDPE-----TVDLRTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAA 166
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 167 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 211
>gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 414]
gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 414]
Length = 297
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 84/223 (37%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + + GKK+RS L+ A +
Sbjct: 1 MQKIDDLIKQFLQELDYEPILN--------MLLNVKSGKKLRSKLLLAIAEESEI----- 47
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 48 -AFKICASIELIHLASLLHDDIIDESELRRGSRSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KVDTRFASIISDAVVKLAIGELM-------DVNLGEKFNINKEAYLKMIYNKTAILIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILARLHEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 297
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFTSIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 80/221 (36%), Gaps = 10/221 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
++ L + T ++A + GK+ R +V A + +
Sbjct: 2 VEKELQPFADSIKELVSTDQPILSMAAKHFFEKRHGKRFRPTIVQLMAKANHQGSEVWRK 61
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ + + +D RRG VH Y A++AG+ LL A +++
Sbjct: 62 QAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLAR 121
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ I + + SL +Q +E + KT +L+C+AC
Sbjct: 122 LENTAVVQIMATALESLVAGEIMQL------KASPEELLQMQSYLKKSYYKTASLICYAC 175
Query: 194 ESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEE 232
S A++ + FG ++G+ FQ+ DD+LD
Sbjct: 176 RSTALLGGHAYGSTVATACEEFGFHMGLAFQIQDDILDFTA 216
>gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein
[Streptosporangium roseum DSM 43021]
Length = 350
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 76/216 (35%), Gaps = 11/216 (5%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN--HLTALRVGAAI 79
D L + H+ H + R GGK +R LV A V AA+
Sbjct: 40 DRLPEEIRHIAGYHAGWWDAEGRPRQGGGKAVRPALVLASAWAAGGEDAETVRAAVPAAV 99
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ MD RR +P + AI+AG+ LLT A ++++
Sbjct: 100 AVELVHDFSLLHDDIMDGDLTRRHRPAAWSVFGVGEAILAGDVLLTLALDLLAGSPGLRV 159
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ S L Q + KTGAL+ ACE GA+
Sbjct: 160 LTGSLLRLCSGQSADLAFETRTDVTL---------AQCVEMAAGKTGALLGCACEIGALA 210
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A Q+ FG +LG+ FQL DDLL D
Sbjct: 211 GGAGQDRAGLFGRFGHHLGLAFQLTDDLLGIWGDPA 246
>gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi]
gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi]
Length = 449
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 130 LDDELKYFYDDVRDLLQS------GTSQPELDTIACYYFDGQGKALRPMVTLLMAKALNY 183
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 184 HLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 243
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +IS ++ + SQ++ L +Q + E
Sbjct: 244 YILSIASIMISRLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 297
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 298 YRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 351
>gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
Length = 332
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 3/214 (1%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+ + DRL A + + GGK++R + A + A + A
Sbjct: 16 LIDHYIMDFMSITPDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASI 75
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
++ MD +RRG PT H+ Y + AI+AG+ L AF++I+ + +
Sbjct: 76 ETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSH 135
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIM 199
++ + +Q G + +E D + ++KTGAL+ A GA+
Sbjct: 136 EQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVA 195
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A A ++ + G N GI FQ+ DD+L D
Sbjct: 196 AGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGD 229
>gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20]
gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20]
Length = 279
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVG 76
L++ L + S N+ L ++ GGK R+ L+ + +
Sbjct: 7 KHLENHLPKVQSF-HPFFNEALAKMLK---AGGKHFRAQLLLGVVQNKAPHLIPNALNAA 62
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH YSLIHDDLP+MDN +RRG PT+H YDE TAI+ G+ L T AF ++S+
Sbjct: 63 LALEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTAILVGDALNTEAFLLLSNLNL 122
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I L+ I + +D+ ++ ++ + KT L+ A + G
Sbjct: 123 KESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNLEELEFLHTHKTAKLIAAALKMG 182
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + E E++ G LG+IFQ+ DD++D
Sbjct: 183 CEICELDEKESEKIYQIGLKLGLIFQINDDIID 215
>gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 351
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 68/245 (27%), Gaps = 16/245 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ E +R+D +L + + A D + + + GK++R+
Sbjct: 7 DMAEFKERVDDVLRVFVAREAERFAAVDPVLDPVAGQLESSAAHGKRLRAAFCYWGWRAT 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG--------YIRRGKPTVHIQYDEVTAI 117
+L AA + + + D D+ ++
Sbjct: 67 GQPDDESLVRAAASMELVHAAAVVHDDLIDDSPLRHGLPTAHMALRGAARGRPRSVSAGR 126
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDE 174
+ + + + ++ G+ L+I
Sbjct: 127 SLAMLVGDLLMGLAGQLFATSGLPAAYLARARPLWSALARDLIAGECLEILRTGAAPDTA 186
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
+ +I+ + G +A A + + +G LG FQL DDL+
Sbjct: 187 DSLKVIRYKTAKYTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDDLVGLFGSP 246
Query: 233 -DLPK 236
D K
Sbjct: 247 QDTGK 251
>gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327]
Length = 281
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVGAA 78
L+ L + S N+ L ++ GGK R+ L+ L V A
Sbjct: 11 LEKNLPKVESF-HPFFNEALALMLK---AGGKHFRAQLLLSVVQSNKPELLNQALDVALA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP+MDN RRG PT+H YDE TAI+ G+ L T AF ++S +
Sbjct: 67 LEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKD 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ I+ L+ + + +D+ + ++ + KT L+ A + G
Sbjct: 127 EIKIKLIKTLAFNTGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCE 186
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + E ++ G LG+IFQ+ DD++D
Sbjct: 187 ICELNNEESNQIYKLGLKLGLIFQINDDIIDVT 219
>gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum]
Length = 432
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 98/254 (38%), Gaps = 27/254 (10%)
Query: 5 LPSKLQENSKR-----IDTILDDL-LLQTASHMQTQHNDR----LLSAIRYAL-LGGKKI 53
LP + E ++ + ++LD L TA T + + L +Y GGK
Sbjct: 84 LPEFISEKLRKLQYEVVQSLLDQSSLETTADSCDTPSSSKFTQNLQKMAKYYFDQGGKLF 143
Query: 54 RSFLVTECASLF------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
R + A +TA + A+ ++ +D +R
Sbjct: 144 RPTVSLLMAHACNQIKPKTPVVESGRETVTANQYKIAVISEMIHTASLVHDDVIDESDVR 203
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RG PTV+ + A++ G+ +L A +++ S ++ + ++ L +Q G
Sbjct: 204 RGSPTVNAIWGNKMAVLVGDFILARATQVLCSIARPNVISVMATIIEDLVRGEFMQMTTG 263
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + + KT +L +C+S A++A + +E +G +LG+ F
Sbjct: 264 SETDATLRFDKYMAKTYS----KTASLFANSCKSAAMLADIPEANEEIAFEYGRSLGLAF 319
Query: 222 QLADDLLDCEEDLP 235
QL DDLLD
Sbjct: 320 QLVDDLLDFVSTSA 333
>gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
3_1_12]
gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
Length = 324
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 10/231 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L I T L+D S + + + GK +R LV A L+
Sbjct: 3 SLSLIKSPITTELEDFKNLFDSSLSSSNLLLNNVIAHIRQRNGKMMRPILVLLVAKLYGE 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL +
Sbjct: 63 IKPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLVGDFLLATS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + L L LQ ++ + ET F + + KT A
Sbjct: 121 LVHAERTRNHDIIGVVACLGQDLAEGEILQL------SNVSNREYSETIYFDVIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
L ++ A+ + + E R FGEN+GI FQ+ DD+ D E ++ K
Sbjct: 175 LFAACTKAAALSVEITDEKAEFARLFGENIGICFQIKDDIFDYFESKEIGK 225
>gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba]
gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba]
Length = 470
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+D L +++ + L + Y G GK +R + A N +
Sbjct: 151 LDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 210
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +S +D RRGKP+V+ ++ +AG+ +L+ A
Sbjct: 211 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA 270
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ ++ + SQ++ L +Q + E KT +
Sbjct: 271 SIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTAS 324
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 325 LIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 372
>gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis]
gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis]
Length = 445
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
L + K + DLL L + Y G GK +R + A N
Sbjct: 126 LDDELKYFYDDVRDLLQS------GTSQSELDTIACYYFDGQGKALRPMVTMLMAKALNY 179
Query: 68 NHLTALRVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +S +D RRGKP+V+ ++ +AG+
Sbjct: 180 HLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGD 239
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
+L+ A +IS ++ + SQ++ L +Q + E
Sbjct: 240 YILSIASIMISRLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKT 293
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 294 YRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 347
>gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
HF4000_ANIW137N18]
Length = 273
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SP 134
AA ++ MDN +R G PT H ++D AI+AG+ L + A+ IS
Sbjct: 11 AAASAVEMIHNFTLVHDDIMDNDEMRHGVPTTHKKFDMPLAILAGDVLYSKAYHTISSKS 70
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
K + LS T +G +G + + + KT L +C
Sbjct: 71 KLSSNYTTQLVSKLSKTCVEICEGQVGDIKFAENKRIPTGKEYIKMIEKKTAVLFEVSCA 130
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
GAI A Q + + L FG+NLGI+FQ+ DDLL D KK
Sbjct: 131 MGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLLGIIGDSKITKK 175
>gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1]
gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1]
Length = 331
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 81/226 (35%), Gaps = 12/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
I I+ + + N ++ + GGK++R + A + + +
Sbjct: 9 ADIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLH-DE 67
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + A ++ +D +RRGKPT + +D TA++ G+ L+ +F
Sbjct: 68 QSQQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFN 127
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + S + LQ + E+ I KT L
Sbjct: 128 LLVGFNHLPLLKLFSDGTCDIAEGEVLQLQHQ------HNPKTLESDYLQIIDGKTSRLF 181
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + GA + + + L F + G FQ+ DD+LD D
Sbjct: 182 MMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAA 226
>gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
Length = 299
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 27/229 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E + + + + + D+L + GK +RS L+ + +N
Sbjct: 2 EELELVKNQIKKFVEVCNYEKSLELLDKLAT--------GKMLRSKLIL---KIAGINEE 50
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ ++ +D RRG+P+V+ YD T+I+ G+ L + AF
Sbjct: 51 SIKLCAIVE---MIHAASLLHDDVIDEADTRRGQPSVNALYDNKTSIMFGDILYSRAFTE 107
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S ++ +I + + L + + Q T+ + KT +L+
Sbjct: 108 LSQMDKRVAYHISNAVTLLSIGEMM-------DVDLTQSFNTSYTKYLDMIYKKTASLIE 160
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S AI+ + + + +G+NLG+ FQ+ DD+LD +D L K
Sbjct: 161 ASARSAAILVNLDEE---KYATYGKNLGLAFQMIDDILDITQDSKTLGK 206
>gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5]
gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5]
Length = 360
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 71/241 (29%), Gaps = 18/241 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
+RID L + L + + L AI + L GGK++R
Sbjct: 16 RQRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVD 75
Query: 70 LTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----IQYDEV 114
+ + S P+M + R + + +
Sbjct: 76 SDQVVATLAALEFVQASALIHDDLMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDA 135
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+ G+ L ++ E++ S R++ + G + + +
Sbjct: 136 AAILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTVGQYLDVLTQATGDTSLD 195
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + GA +A A +G LG FQL DD+L D
Sbjct: 196 RAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDP 255
Query: 235 P 235
Sbjct: 256 E 256
>gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus]
Length = 366
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 13/221 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L +L + + L Y G GK R +V A N++H + V
Sbjct: 52 KDLKNLYEDIKKELLVSTAE-LREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQ 110
Query: 77 AAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+ + ++ +D+ RRGK TV+ + E A++AG+ +L+ A +
Sbjct: 111 ASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLAL 170
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +Q++ L LQ ++E KT +L+
Sbjct: 171 ARIGNTTIISVLTQVIEDLVRGEFLQL------GSKENENERFAHYLEKTFKKTASLIAN 224
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+C++ +I+ E +G+N+GI FQL DD+LD
Sbjct: 225 SCKAVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTS 265
>gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
Length = 360
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 71/241 (29%), Gaps = 18/241 (7%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
+RID L + L + + L AI + L GGK++R
Sbjct: 16 RQRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVD 75
Query: 70 LTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----IQYDEV 114
+ + S P+M + R + + +
Sbjct: 76 SDQVVATLAALEFVQASALIHDDLMDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDA 135
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+ G+ L ++ E++ S R++ + G + + +
Sbjct: 136 AAILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTVGQYLDVLTQATGDTSLD 195
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + GA +A A +G LG FQL DD+L D
Sbjct: 196 RAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVLGVFGDP 255
Query: 235 P 235
Sbjct: 256 E 256
>gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
Length = 325
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 9/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + ++ ++ + M ++ L Y + GK++R V A L N
Sbjct: 4 VSQIKDPVNQEMELFETKFRESMSSKVA-LLNRITYYIVNRKGKQMRPMFVFLTAKLLNN 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D RRG +++ + A++ G+ L +
Sbjct: 63 GEVNERTYRGASIIELIHTASLVHDDVVDESNKRRGFFSINALWKNKIAVLVGDYLFSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ ++ + D I + KT
Sbjct: 123 LLLSLDNGDFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYD------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
L+ C GA E E R FGE G+ FQ+ DDL D E+ + K
Sbjct: 177 LIAACCSMGACSVKPESEEVETFRKFGEFCGMAFQIKDDLFDYGEQKIGK 226
>gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator]
Length = 337
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 16/245 (6%)
Query: 1 MNGGLPSKLQENS----KRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLG-GKKIR 54
M LP L + + ++ L L + L Y + G GK +R
Sbjct: 1 MQTQLPGSLSDYQIDPYRLVEDDLKYLFENIQEELINATTQKELQPIATYYMDGQGKALR 60
Query: 55 SFLVTECAS----LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L A + L+ + A+ + +D RRGKP+V+I
Sbjct: 61 PMLSILMARVINYHKGSDVLSYSQRRIAMISEMIHVASLLHDDVIDQSDSRRGKPSVNII 120
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ + +AG+ +L A +++ + + +T + + M G +
Sbjct: 121 WSQKKVAMAGDYILAVAGTMLARIQNDDVT---IVINQIITDLVQGEFMQLGSKETENER 177
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
F + KT +LM ++ A +A E +G N+G+ FQL DD LD
Sbjct: 178 FAHYFTKTYL---KTASLMANCSKAVATLAEVDDRMVEMAYQYGRNVGLAFQLVDDFLDF 234
Query: 231 EEDLP 235
Sbjct: 235 VASSE 239
>gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
Length = 324
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I+ L+ S + + + GK +R LV A L++V
Sbjct: 3 SISLIRTPIEAELEAFKKLFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYDV 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ L
Sbjct: 63 VRPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLTGDYL---- 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ +S + + L L Q+ ++ + E+ F + + KT A
Sbjct: 117 --LATSLVHAEQTKSHLIIRLVSLLGQDLADGELLQLSNVSNHSFSESVYFDVIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L ++ A+ A++ E E R GE +GI FQ+ DD+ D
Sbjct: 175 LFAACTKAAALSVDANEEEAEFARLLGEYIGICFQIKDDIFDYF 218
>gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 319
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 9 LQENS-KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+++ ++ D L+ ++ + + + S GGK+IR L L
Sbjct: 6 LKDSLIRKFDKKLETIIREDLKILSEIKTYTIQS-------GGKRIRPILHYCLCQLLGY 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L VGA E IH SL+HDD+ +D RRG +V ++ TAI+AG+ LL
Sbjct: 59 SGKHWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACG 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ ++ + +Q++ L+ + +Q D + I KT +
Sbjct: 117 IDHLNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNK------IIYGKTAS 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C S I++ ++ EK++LR FG +LG FQ DD +D K
Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASK 219
>gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; AltName: Full=Farnesyltranstransferase
gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus]
gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
gi|227044|prf||1613414G crtE gene
Length = 289
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
KRI++ L + + + L +A+ Y + GG +IR ++ A +
Sbjct: 5 KRIESAL---VKALSPEALGESPPLLAAALPYGVFPGGARIRPTILVSVALACGDDCPAV 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A+E +HC SL+HDDLP+ DN IRRGKP++H Y+E A++AG+ LL FE++
Sbjct: 62 TDAAAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEVL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ D + + G+ GQ + + + + + KTGAL
Sbjct: 122 ADVGAVNPDRALKLISKLGQLSGARGGICAGQAWESESK----VDLAAYHQAKTGALFIA 177
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A + GAI A E E G +G FQ+ADDL D
Sbjct: 178 ATQMGAIAAGY---EAEPWFDLGMRIGSAFQIADDLKDA 213
>gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 312
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ++I L+ + + + ++ GGK +RS L+ A L N ++
Sbjct: 4 QQLEQIQQRLEHVAVLREPQVHALIQQQIN-------AGGKMLRSGLMLMLARLGNPDND 56
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ GAAIE +H +L+HDD+ +D+ +RRG TV + AI AG+ L F++
Sbjct: 57 DLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQL 114
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + + H + G + ++ KT AL
Sbjct: 115 LSEQNP--ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSV---SEYLKAIAGKTAALFA 169
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +GA + EK+ FG LG+ FQ+ DDLLD +
Sbjct: 170 LATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 211
>gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia]
gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia]
Length = 461
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+D L +++ + L + Y G GK +R + A N +
Sbjct: 117 LDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 176
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +S +D RRGKP+V+ ++ +AG+ +L+ A
Sbjct: 177 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA 236
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ ++ + SQ++ L +Q + E KT +
Sbjct: 237 SIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTAS 290
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 291 LIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 338
>gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
serovar Lai str. 56601]
Length = 319
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 9 LQENS-KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+++ ++ D L+ ++ + + + S GGK+IR L L
Sbjct: 6 LKDSLIRKFDKKLETIIREDLKILSEIKTYTIQS-------GGKRIRPILHYCLCQLLGY 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L VGA E IH SL+HDD+ +D RRG +V ++ TAI+AG+ LL
Sbjct: 59 SGKHWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACG 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ ++ + +Q++ L+ + +Q D + I KT +
Sbjct: 117 IDHLNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNK------IIYGKTAS 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
L C S I++ ++ EK++LR FG +LG FQ DD +D K
Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASK 219
>gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter jejuni subsp. jejuni HB93-13]
Length = 297
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYKLS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
Length = 325
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 9/230 (3%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
+ + + + ++ + M ++ L + + GK++R V A +
Sbjct: 2 KTVSQIKEPVAHEMELFEKKFHLFMSSRVA-LLNKITHFIVNRKGKQMRPMFVFLVAKMV 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + A ++ +D+ RRG +++ + A++ G+ LL+
Sbjct: 61 SKGEVNDRTYRGASVIELIHTATLVHDDIVDDSNQRRGFFSINALWKNKIAVLVGDFLLS 120
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ I S + ++ LQ ++ +D + + I + KT
Sbjct: 121 KGLLLSIDNDDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYE------IIRQKT 174
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ C GA + E +R FGE +G+ FQ+ DDL D D
Sbjct: 175 ATLIAACCSLGAAAVRPGSKDVEDMRKFGELIGMAFQIKDDLFDY-GDQK 223
>gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1]
gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1]
Length = 365
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 89/263 (33%), Gaps = 29/263 (11%)
Query: 1 MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSF 56
M+ + L E ++R+ + L ++ + + + + Y L GGK++R+F
Sbjct: 1 MDNYME--LLEFARRVTNKTLQEIFDEVDVEAKGVSSKVVDIPFISRDYTLRGGKRLRAF 58
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYS-LIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
LV + + + I + MD IRRG PTVH+ +D
Sbjct: 59 LVLIGYWSRKWGYGNIDSIKYLMAGIEFLQSYLLVHDDIMDEDEIRRGGPTVHVWFDRKC 118
Query: 116 AIIAGNGLLTYA------------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ + S T+L + L T+ G++ + GQ
Sbjct: 119 REEGLISRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYALKELIKTYTRGVRLVAYGQ 178
Query: 164 M-----LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMA-HASQNEKERLRCFGEN 216
+ + + E V+ I + GAI + + L +
Sbjct: 179 FLDVLIANTPLKKVSEDDVYNIHMLKTASYTVELPLHLGAIASLMYNNELLMELSQYALP 238
Query: 217 LGIIFQLADDLLDCEED---LPK 236
GI FQL DD+L D K
Sbjct: 239 AGIAFQLQDDILGLYGDPKVTGK 261
>gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
doylei 269.97]
Length = 297
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAVIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEQD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 386
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 74/274 (27%), Gaps = 44/274 (16%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFL--- 57
LP+ L ++ L+++L + Q LL A L GGK++R+ L
Sbjct: 2 SALPAALSRVRPAVEHRLEEVLAGCHRRWEELEQAAPELLKAADSVLGGGKRMRAVLGAV 61
Query: 58 ---------------VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
A + + + LP+ + +
Sbjct: 62 GCTILSAPEHRNKELTGASAVHLGAALELYQASALVHDDLMDGASTRRGLPAAHHAFAWE 121
Query: 103 GKPTVHIQYDEVTAIIAGNGLLT-------YAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ + + L ++ T + +
Sbjct: 122 HETRGWLGHSRAFGSNGAILLGDLLLSLAGEEMSALAQAHTSSGCGDEAVGHARAAFDAM 181
Query: 156 LQ---------------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ GQ + + + + +++ + GA++A
Sbjct: 182 TTEVALGQYLDVRSENLPLPWGQDPAAAAQRMRDDALSVVRHKSARYSVRHPLLIGALLA 241
Query: 201 HA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S + L FGE +GI FQL DD L
Sbjct: 242 GMAPSSPTAKHLAEFGEEIGIAFQLRDDELGVFG 275
>gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase
[Mycobacterium smegmatis str. MC2 155]
gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase
[Mycobacterium smegmatis str. MC2 155]
Length = 329
Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 17/222 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + +++ RI+ ++ D L + M A+++ GGK+ R
Sbjct: 9 DPAFAADVRDGVARIEDLMSDELGKADELM--------AEAVQHLFQAGGKRFRPLFTVL 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + MD +RRG + + ++ AI+AG
Sbjct: 61 SAQL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQMRRGAQSANARWGNNIAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S I +T + + D +
Sbjct: 120 DYLFATASRLVSRLGPDAVRVIADTFAQLVTGQMR-------ETRGAADHVDSVDHYLKV 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + A+ + ERL G +G FQ
Sbjct: 173 VYEKTACLIAASGRFGATFSGANDEQIERLSRLGGIVGTAFQ 214
>gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 355
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 64 GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 121
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T T + L +
Sbjct: 122 KVHGPAQAILVGDALFALANEILLELDTVEAGR---ATRRLTTATLRLIDGQAQDISYEH 178
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 179 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLL 238
Query: 229 DCEEDLP 235
D
Sbjct: 239 GIWGDPE 245
>gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
13280]
gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
13280]
Length = 355
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 89/239 (37%), Gaps = 9/239 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALLGG-KKIRSFLV 58
+ L++ I+ L + SH D L + + + GG K++R L
Sbjct: 10 ESFVAYLKDRLPLIERALHEADAVAMSHEGAPTEDLDRYLYAPLAHFTAGGGKRVRPVLA 69
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A AL G AIE +LIHDD+ D +RRG+P ++ AI
Sbjct: 70 LLGAEAVGGCADQALSCGVAIELFQSAALIHDDIA--DASELRRGEPCLYRTEGLGLAIN 127
Query: 119 AGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ LT FEI ++ + +R L L+G + +
Sbjct: 128 AGDLALTRVFEIVLADGSLPAERRVRVLEELVRMERHTLEGQALDLGWARDGRWDVTSDD 187
Query: 178 FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +GA+ A A + L G G+ FQL DDLL+ D
Sbjct: 188 YLYMIDGKTAWYTVASPLYAGALAAGAEPDAVRGLIEVGLPAGLAFQLQDDLLNLVGDA 246
>gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens
ATCC 23877]
Length = 347
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 63/185 (34%), Gaps = 7/185 (3%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD-LPSMDNGYIRRGKPTV 107
GGK +R L A + A+ A+E +H ++L+HDD + + ++
Sbjct: 62 GGKAVRPALALLSAVAVGADPAAAVPGAVAVELVHDFTLLHDDVIDGDALRRHQPAAWSL 121
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
V A A S + +L L
Sbjct: 122 FGTPAAVLTGDALLVAALRALTQASPRRAGAAVQELVAALLELVEGQSHDVAFEKAHDVS 181
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ KTGAL+ AC G ++A A LR FG +LG+ FQ ADD+
Sbjct: 182 V------ADYLTMAAGKTGALIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCADDI 235
Query: 228 LDCEE 232
L
Sbjct: 236 LGIWG 240
>gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
LMS2-1]
Length = 312
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +R++ + Q + +Q Q N GGK +RS L+ A
Sbjct: 5 QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 53
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + GAAIE +H +L+HDD+ +D+ IRRG TV + AI AG+ L
Sbjct: 54 DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 111
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + Q KT A
Sbjct: 112 FQLLSEQDPE-----TVDLRTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAA 166
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 167 LFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDLLDYTQ 211
>gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 289
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 12/227 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ RI+ L + A + RL +A++ A+ G ++R L A+ +
Sbjct: 2 DVMARIEKSL---VAAVALADRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDE 58
Query: 70 LTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A +AIE +HC SL+HDDLP DN +RRG+P+VH + E A++AG+ L+
Sbjct: 59 PAATDAAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALI---- 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ +L + G+ G E E + + KTGAL
Sbjct: 115 -VLAFQTLAKSRCSPLRLAQLIATIGDAVGVPHGIAAGQAWECEPEIDLSHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A SGA A E R GE +G +Q+ADD+ D D
Sbjct: 174 FAAATVSGAAAAG--HANPEAWRSLGEKIGEAYQVADDIRDAASDEE 218
>gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans]
gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans]
Length = 461
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+D L +++ + L + Y G GK +R + A N +
Sbjct: 117 LDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 176
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +S +D RRGKP+V+ ++ +AG+ +L+ A
Sbjct: 177 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA 236
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ ++ + SQ++ L +Q + E KT +
Sbjct: 237 SIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTAS 290
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 291 LIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 338
>gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
Length = 326
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 8/222 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L + + T N +L A++ A GGK +R A++ +
Sbjct: 11 AINNALGKVNQTINDRI-TIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQE 69
Query: 74 RVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
R+ + + +D+ RRG +V + + TA+ G+ L T F+++
Sbjct: 70 RLIKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQSAFGKDTAVYTGDFLFTIFFDLLV 129
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T R+ + GQM + D + KT A+ A
Sbjct: 130 ETMTGSPYLTRNARTMRKILTG-----ELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLA 184
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
E GA H+ + + G+N+GI FQ+ DD+LD D
Sbjct: 185 AEEGAYFGHSDRRTINLAKRIGQNIGISFQILDDILDYSGDE 226
>gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
Length = 311
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 7/210 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+L + + L Y + GK++R V A + + + A
Sbjct: 2 ELFEKKFFQSMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSDGKVNERTYRGASV 61
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
++ +D+ RRG +++ + A++ G+ LL+ +
Sbjct: 62 IELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNNDFDLL 121
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I S + ++ LQ ++ ++ + D I + KT L+ C GA
Sbjct: 122 KIISVAVREMSEGELLQIEKARRLDITEEVYYD------IIRQKTATLIAACCSLGAASV 175
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ E +R FGE +G+ FQ+ DDL D
Sbjct: 176 KPDSGDVENMRRFGELIGMAFQIKDDLFDY 205
>gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
Length = 281
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVGAA 78
L+ L + S N+ L ++ GGK R+ L+ L V A
Sbjct: 11 LEKNLPKVESF-HPFFNEALALMLK---AGGKHFRAQLLLSVVQSNKPELLNQALDVALA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP+MDN RRG PT+H YDE TAI+ G+ L T AF ++S +
Sbjct: 67 LEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDEPTAILVGDALNTEAFLVLSHAHLKD 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ I+ L+ + + +D+ + ++ + KT L+ A + G
Sbjct: 127 EIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCE 186
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + E ++ G LG+IFQ+ DD++D
Sbjct: 187 ICELNNEENNQIYKLGLKLGLIFQINDDIIDVT 219
>gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster]
gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster]
gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster]
Length = 436
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+D L +++ + L + Y G GK +R + A N +
Sbjct: 117 LDDDLKYFYDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNES 176
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ +S +D RRGKP+V+ ++ +AG+ +L+ A
Sbjct: 177 HQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIA 236
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ ++ + SQ++ L +Q + E KT +
Sbjct: 237 SIMIARLRSDDVTIVLSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTAS 290
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ A ++ A++A A N E +G N+G+ FQL DD+LD
Sbjct: 291 LIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 338
>gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
4304]
gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
4304]
Length = 292
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
I +D L + ++ ++ + YA+ GGK+ R +V A L ++ + +
Sbjct: 9 RIFEDSLKKFVESVEAT--PKIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLA 66
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
++E IH SL+HDD+ +D RR + +H +YD AI+ G+ L++ + E+ S
Sbjct: 67 LSVELIHTASLVHDDV--IDKAEKRRKREALHKKYDISLAIVLGDWLISKSVELTS---- 120
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+++ ++ + + E E F + KT AL ++ +S
Sbjct: 121 ----KYGEEIIRDFSNVGMMMSEGEVLDIYSIKENFTEKDYFECIEKKTAALFAYSAKSA 176
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++L +G NLGI +Q+ DDLL+
Sbjct: 177 CKIVCEDRIAADKLFDYGLNLGIAYQIVDDLLEY 210
>gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1]
Length = 281
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVGAA 78
L+ L + S N+ L ++ GGK R+ L+ L V A
Sbjct: 11 LEKNLPKVESF-HPFFNEALALMLK---AGGKHFRAQLLLSVVQSNKPELLNQALDVALA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP+MDN RRG PT+H YDE TAI+ G+ L T AF ++S +
Sbjct: 67 LEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKD 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ I+ L+ + + +D+ + ++ + KT L+ A + G
Sbjct: 127 EIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCE 186
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + E ++ G LG+IFQ+ DD++D
Sbjct: 187 ICELNNEESNQIYKLGLKLGLIFQINDDIIDVT 219
>gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
Length = 329
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 75/222 (33%), Gaps = 17/222 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ +++ RI+ ++ + L + M A+++ GGK+ R
Sbjct: 9 DAEFAQDVRDGVARIEALMSEELGKADVLM--------AEAVQHLFQAGGKRFRPLFTVL 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + MD +RRG P+ + ++ AI+AG
Sbjct: 61 SAQL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWSNNIAILAG 119
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S I L +T + + D + +
Sbjct: 120 DYLFATASRLVSRLGPDAVRIIADTFALLVTGQMR-------ETRGAADHVDEVDHYLKV 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + A + ERL G +G FQ
Sbjct: 173 VYEKTACLIAASGRFGATFSGADDEQIERLARLGGIVGTAFQ 214
>gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
Length = 325
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 82/218 (37%), Gaps = 10/218 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+L + + + L + + GK++R V A L + A
Sbjct: 16 ELFEEKFTQSMFSNVALLNRITHFIVNRKGKQMRPMFVFLVAKLVGNGKVNERTYRGASV 75
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
++ +D+ RRG +++ + A++ G+ LL+ + +
Sbjct: 76 IELIHTATLVHDDVVDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIENEDFDLL 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I S + ++ LQ + + + + I + KT L+ C GA
Sbjct: 136 KIISVAVREMSQGELLQIEKARNLDITETIYYE------IIRQKTATLLASCCALGAQSV 189
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PK 236
+A+ E E++ FGE LG+ FQ+ DDL D D K
Sbjct: 190 NATVEEVEKMHHFGEVLGMAFQIKDDLFDY-GDQKIGK 226
>gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1]
Length = 348
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 12/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
I I+ + + N ++ + GGK++R + A + + +
Sbjct: 26 ADIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLH-DE 84
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + A ++ +D +RRGKPT + +D TA++ G+ L+ +F
Sbjct: 85 QSQQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFN 144
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + S + LQ + E+ I KT L
Sbjct: 145 LLVGFNHLPLLKLFSDGTCDIAEGEVLQLQHQ------HNPKTLESDYLQIIDGKTSRLF 198
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + A++ + + L F + G FQ+ DD+LD D
Sbjct: 199 MMATKGAALLQGR-EEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAA 243
>gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642]
gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642]
Length = 301
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L +LL + ++ A+++ + GGK+ R +V A L + L
Sbjct: 11 IERALKELLDREVII------PKIKKALKHLIEAGGKRTRPIIVLLSAKLAGGDEKEILD 64
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A+E IH SL HDD+ +D G RR K T++++YD+ AI+ G+ L++ + ++ +
Sbjct: 65 MALAVELIHTASLAHDDV--IDRGVKRRNKETLNVKYDDSLAILVGDWLISKSVQLTA-- 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
++ L + E DE F + KT AL ++ +
Sbjct: 121 ------KYGYDIVRDFAKTGMLMSEGEVLDVYSTKEKFDEEDYFKCIEYKTAALFAYSAK 174
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
A + E+L +G NLGI +QL DDLL+ D K
Sbjct: 175 -NAYQYFSQDEGVEKLFQYGLNLGIAYQLVDDLLEYLSLYGDKSSK 219
>gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
Length = 328
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 14/207 (6%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLI 88
L Y G GK R +V + N +H + ++ ++
Sbjct: 30 SLLRDMSHYYFDGQGKAFRPMVVLLMSRACNFHHGAAENSLALPSQRRISMIAEMIHTAS 89
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
+D RRGK V + + AI+ G+ +LT + ++ ++ L
Sbjct: 90 LVHDDVIDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALA---AIGNKDVVILLSQ 146
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
+ + + M G D + F + KT +L+ +C + A+++ +S++ +E
Sbjct: 147 VIEDLVRGEFMQLGTKEDEDERFAHYLKKTF---KKTASLLAHSCRAVAVLSGSSKDVQE 203
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+G+NLGI FQL DD+LD
Sbjct: 204 VAYQYGKNLGIAFQLVDDMLDFMSTEE 230
>gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
Length = 324
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 13/219 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +D ++ D + + + L+SA GGK++R L A
Sbjct: 11 DMAEVDALIIDRMQSDVPIIPK-LAEHLVSA------GGKRLRPLLTVAAARASGTEGDI 63
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A ++ +D +RRGK H+ + T+++ G+ L AFE++
Sbjct: 64 LSPKKLAAAVEFIHTATLLHDDIVDASELRRGKVAAHLIWGAPTSVLVGDFLFARAFELM 123
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ I +Q ++ LQ D +D+ I KT L
Sbjct: 124 VETDSMRALGILAQASRVISEGEVLQL------TRAHDLNLDQATYLQIISAKTAELFAA 177
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A E+GA+ A A LR +G LGI FQLADD LD
Sbjct: 178 AAEAGAVGAGADAAATAALRDYGMALGIAFQLADDALDY 216
>gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens]
Length = 320
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 9/218 (4%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG----GKKIRSFLVTECASLF-NVNHLTALRVGAA 78
L + + L A + G GKKIR+ +V A F + + A
Sbjct: 5 LSRHMRDLVQVEVPVLGEAATHLFAGSNSGGKKIRATMVLLTARAFRKGRGRSLRQRKLA 64
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ +D +RRG +V ++ + A++AG+ LL A ++ +
Sbjct: 65 EIIEIIHTASLFHDDVIDGADVRRGCLSVSAKFGDKIAVLAGDFLLARACVALAKLENLA 124
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + H + + + D KTG+LM AC + A+
Sbjct: 125 VVE---LISVVIEHLVRGEIVQMRPESHSSDTHTLLEAYLHKSFYKTGSLMANACRAAAL 181
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLP 235
+ +Q + +G ++G+ FQL DD LD E DL
Sbjct: 182 LEDETQANCDAAFAYGRHVGLAFQLVDDALDFEASDLE 219
>gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
kansasii ATCC 12478]
Length = 352
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 77/254 (30%), Gaps = 27/254 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + +L+ L D + A+++ + ++ +AL GGK++R
Sbjct: 1 MGGAITDQLRRY-------LHDR-RREAAYIGSDYDALTAWLEDFALRGGKRLRPVFAYW 52
Query: 61 CASLFNVNHLTA------------LRVGAAIECIHCYSLIHDDLPSMDNG----YIRRGK 104
+ + S P+ + R
Sbjct: 53 GWHAVTTEEPGPEILQLFSALELLHAWALIHDDVIDASSTRRGRPTAHVHFAALHRERNW 112
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
Q+ AI+ G+ +A +I+S ++ + + I + + G +
Sbjct: 113 LGPAHQFGISAAILLGDVAQAWADDIVSEVGQTSLPPDAARRVRRVWSGIRTEVLGGQYL 172
Query: 165 LDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + + + + + G A + FG +LG+ F
Sbjct: 173 DIVAEASAASSIASAMTVATFKTACYTVSRPLQLGVAAAADRPDVAAAFHQFGTDLGVAF 232
Query: 222 QLADDLLDCEEDLP 235
QL DD+L D
Sbjct: 233 QLRDDVLGVFGDPA 246
>gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus]
Length = 398
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 16/226 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAA 78
L +L + L Y G GK R +V A NV+H + V A+
Sbjct: 86 LKNLYEDIKKELLVST-TELKEMCEYYFDGKGKAFRPIIVVLMARACNVHHDNSRDVQAS 144
Query: 79 IECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
I ++ +D+ RRGK TV+ + E A++AG+ +L+ A ++
Sbjct: 145 QRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASVALAR 204
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ +Q++ L LQ ++E KT +L+ +C
Sbjct: 205 IGNTTIVSVLTQVLEDLVRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSC 258
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
++ +I+ E +G+N+GI FQL DD+LD D L K
Sbjct: 259 KAVSILGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTACTDQLGK 304
>gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni 260.94]
Length = 297
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLEEL------GYEPILN--MLSNVKSGKKLRSKLLLAIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KLDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl
pyrophosphatesynthetase) (OPP synthetase)
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 329
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
+ ++++ + L + + Y + GG K+IR + A +
Sbjct: 19 DMQKVNESILAQLNSDVALINQLGF--------YIVQGGGKRIRPLIAVLAARALGFDGQ 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T AF++
Sbjct: 71 QAITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQL 128
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ ++ I + L Q M ++ ++ + KT L
Sbjct: 129 VAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMR------VIYSKTARLFE 182
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A ++ AI+A A +++ L+ +G LG FQL DD+LD + L K
Sbjct: 183 VAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVLDYSANANALGK 231
>gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
Length = 322
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +R++ + Q + +Q Q N GGK +RS L+ A
Sbjct: 15 QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + GAAIE +H +L+HDD+ +D+ IRRG TV + AI AG+ L
Sbjct: 64 DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + Q KT A
Sbjct: 122 FQLLSEQDPE-----TVDLRTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAA 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 177 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221
>gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
Length = 329
Score = 78.7 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
MN + + Q + ++++ + L + Y + GG K+IR +
Sbjct: 9 MNA-IQALSQADMQKVNESILAQLNSDVVLINQLGF--------YIVQGGGKRIRPLITV 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A A+ +E IH SL+HDD+ +D +RRG+ T + ++ +++
Sbjct: 60 LAARALGFEGQKAITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLV 117
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + T AF++++ ++ I + L Q M ++ ++
Sbjct: 118 GDFIYTRAFQLVAQLESLKILRIMADATNVLAEGEVQQLMNVNDPQTSEENYMR------ 171
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ KT L A ++ AI+A A +++ L+ +G LG FQL DD+LD + L K
Sbjct: 172 VIYSKTARLFEVAAQAAAIIADADDEQEKALQNYGRYLGTAFQLVDDVLDYSANAKALGK 231
>gi|300122152|emb|CBK22726.2| unnamed protein product [Blastocystis hominis]
Length = 349
Score = 78.7 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 74/252 (29%), Gaps = 21/252 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTE 60
N + ++ ILD + + + ++ I Y +GGK IR V
Sbjct: 7 NIEFVEYKDVLLRDVEEILDSTI-----IVPHELKQDIIKMIEYNCVGGKMIRGLFAVYS 61
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
++ N + + MD +RRGKP + +
Sbjct: 62 AYAMCNEWNEEMKKRAFVAGWGAEMLQGAFLIADDIMDEAEMRRGKPAWYRIDRIGMMSV 121
Query: 119 AGNGLLTYAFEII--------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+L + S + K + + L + L +
Sbjct: 122 NDTFILQSLIYKLLERVISSVSLFYSVQKVFEDIKFVTELGQMLDLNTINHKTHSINYQY 181
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLL 228
F + +I + G ++ + + +LR LG FQ+ DD L
Sbjct: 182 FTKDYYEQIITNKTAYYTIFLPVYLGLVLTESPKETMHSPQLRELCILLGRYFQIRDDFL 241
Query: 229 DCEED---LPKK 237
D D L K+
Sbjct: 242 DAFADPSVLGKE 253
>gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
[Mycobacterium marinum M]
gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
[Mycobacterium marinum M]
Length = 346
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ID + +L L H+ D S++R+ GK +R L CA
Sbjct: 33 KQRAVIDNLSPELRLCAGFHIGWWEPDGRDSSVRH----GKAVRPALSITCARAAGGAMD 88
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ A+E +H SL+HDD+ MD RR +P + Y AI+ G+ LL A ++
Sbjct: 89 AAIPAAVAVELVHDCSLLHDDI--MDGDVTRRHRPAAWVVYGVPMAILTGDALLVLALDL 146
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + + + L + + + KTGAL
Sbjct: 147 VHEGASGSALRKAALELCAGQSADLAFEQRTKVWL---------PECLQMAQQKTGALFG 197
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AC+ GA+ A A ++ FG +LG+ FQL DD+L
Sbjct: 198 VACQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDILGIWGSES 242
>gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
Length = 327
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +++ ++ L ++ LL A GGK+IR L A +
Sbjct: 7 IQQDLKEEVTKLNNLIISCLKSDEGLIEIVG-KYLLEA------GGKRIRPLLTIITAKM 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F+ +++ +A+E IH +L+HDD+ +D+ +RR KPT ++ + T+I+ G+ L
Sbjct: 60 FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +F+++ +I++ +L+ I +G + + + I + I K K
Sbjct: 118 SQSFKLMV-----AAGSIKAMNILAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
T L +C+ GAI+A + + ++ FG+ LG IFQ+
Sbjct: 173 TAELFGASCKVGAIIAEQVDHVSKDMQDFGKLLGTIFQVI 212
>gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
HF0130_25O04]
Length = 277
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ L D+L ++ A R L GGK+IR LV C S
Sbjct: 31 FLAFFENYLSDILDSLDRPVREF-------ARRVLLGGGKRIRPLLVYRCGSDSPDVTDD 83
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L+V A +E +H +L+HDD+ +D+ IRR + T+H + E AI+ G+ L ++A E+
Sbjct: 84 LLKVSAILELVHVATLVHDDV--LDHAKIRRSRATIHTEIGEHAAILLGDALFSFALELA 141
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ T NI S +Q G ++ + KTG
Sbjct: 142 TEFPTTRICNIVSSATRRTCSGEIMQTFARGNYDLGLPDYFSF------IQDKTGEFFKA 195
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+C++GA +A S+ + + FG +LG+ +Q+ DDL+D
Sbjct: 196 SCQAGAFLAGHSECILDLVGEFGLSLGLNYQIFDDLVDSFG 236
>gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
33277]
gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
33277]
Length = 324
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 12/233 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASL 64
+ L+ I+ + D + +Q + + AI+ L G GK +R L A++
Sbjct: 2 TTLEAIQAPINGFVKDFHHSFEHALDSQS-EWMTKAIK-ILNGSTGKHVRPLLTGLVAAV 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A + + + + +D RRG PT++ +D A++ G+ +L
Sbjct: 60 CAGKTNSTTLEAAVLLEMIHTATLI-HDDVIDMASTRRGVPTLNAFFDNRVAVLMGDFVL 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ A + I SQL L+ Q +++ +D ++ + + K
Sbjct: 119 SSALMRAIALNDIRIITIISQLGRELSEGEIRQFETADKVIIDEDIYMG------VIRQK 172
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
T L E GAI A E+++ GE LG FQ+ DD+ D D+ K
Sbjct: 173 TAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDDIFDYYRNDVGK 225
>gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
M+ + L++ L L + + L Y G GK IR +V
Sbjct: 89 MHSDVK--LKDPFMLAQKDLKSLYEDIRKELF-VSKEELKFLCDYYFDGKGKAIRPMIVV 145
Query: 60 ECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
A N++ + A+ ++ +D RRGK T++ + E
Sbjct: 146 LMARALNIHSNRSGDLLPGQRAIAMISEMIHTASLVHDDVIDGSDQRRGKTTINEIWGER 205
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AI+AG+ +L+ A ++ + SQ++ L + M G + ++ F
Sbjct: 206 KAILAGDFILSAASMALARIGNITVVKVLSQVIEDLVRG---EFMQLGSKENEKERFKHY 262
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +L+ +C++ +I+ ++ E +G+N+GI FQL DD+LD
Sbjct: 263 LEKTF---KKTASLIANSCKAVSILVNSDPEVHEIAFQYGKNVGIAFQLVDDVLDFTS 317
>gi|205355656|ref|ZP_03222426.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346433|gb|EDZ33066.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 250
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 4 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 63
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 64 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 123
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 124 FEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 183
Query: 227 LLDCE 231
++D
Sbjct: 184 IIDVT 188
>gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305]
Length = 281
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 154
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 155 FEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 214
Query: 227 LLDCE 231
++D
Sbjct: 215 IIDVT 219
>gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1]
gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169]
gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1]
gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8]
gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7]
gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72]
gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E]
Length = 348
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 12/226 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTECASLFNVNH 69
I I+ + + N ++ + GGK++R + A + + +
Sbjct: 26 ADIQAIVSEDFAIMDKQVFGSLNSKVQLVMSVSKHVIDAGGKRMRPLITLLTARMLH-DE 84
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + A ++ +D +RRGKPT + +D TA++ G+ L+ +F
Sbjct: 85 QSQQAMQLAAITEMLHTATLVHDDVIDASGLRRGKPTANATWDNPTAVLVGDYLIARSFN 144
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + S + LQ + E+ I KT L
Sbjct: 145 LLVGFNHLPLLKLFSDGTCDIAEGEVLQL------QHQHNPKTLESDYLQIIDGKTSRLF 198
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + A++ + + L F + G FQ+ DD+LD D
Sbjct: 199 MMATKGAALLQGR-EEFLDDLGAFAYHFGNAFQMIDDVLDFSGDAA 243
>gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
49540]
gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
49540]
Length = 325
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 93/234 (39%), Gaps = 22/234 (9%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
+L + ++ +++ + T +N L +A++ A GGK +R A L
Sbjct: 11 QLNNALEEVNHLINQRI--------TVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGG 62
Query: 67 VNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
N + ++ + + +D+ RRG P++ + + TA+ +G+ L T
Sbjct: 63 KNSWNSSKLIKIASSLEILHMATLIHDDVIDDSPERRGAPSIQKAFGKDTAVYSGDLLFT 122
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
F+++ T+ ++ +L G++ + + ++ + + +
Sbjct: 123 VFFDLLVETMESSPY--------LATNAQAMRKILAGELGQMNQRYQQQSLLEYYRNING 174
Query: 186 GALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
F+ + GA A + G+N+GI FQ+ DD+LD KK
Sbjct: 175 KTATLFSLAAQEGAHFGGADARTVHLAKHIGQNIGITFQILDDMLDYT--TNKK 226
>gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221]
gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221]
gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Campylobacter
jejuni subsp. jejuni S3]
Length = 281
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 154
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 155 FEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 214
Query: 227 LLDCE 231
++D
Sbjct: 215 IIDVT 219
>gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
HN001]
Length = 322
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +R++ + Q + +Q Q N GGK +RS L+ A
Sbjct: 15 QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + GAAIE +H +L+HDD+ +D+ IRRG TV + AI AG+ L
Sbjct: 64 DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + Q KT A
Sbjct: 122 FQLLSEQDPE-----TVDLRTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAA 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 177 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221
>gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
[Natronomonas pharaonis DSM 2160]
Length = 291
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 29/242 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
L+ +++ L+ +L T T + + +L GGK++R +
Sbjct: 2 EYLERRRALVESRLEAVLDATEPDAMTDRLEHV------SLSGGKRVRPMVALLAFEAAG 55
Query: 67 V---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + A+ ++ +D +RRG + + AI
Sbjct: 56 GELVGEDGRGSEPSRNAIDFAVGIELVHNASLVVDDIIDESELRRGVDSAWAAFGYGPAI 115
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+GLL AF + S + T + + G+ ++ + E
Sbjct: 116 TTSDGLLGEAFSLFS-----------ADPRAMRTVAEAMVELGEGEATELVERPDSEAAY 164
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
+ + KTGAL A E GAI A A + + E +GI FQ+ DD+LD DL
Sbjct: 165 MELARRKTGALFRAAAELGAIAADADTYAVDAFGQYAERVGIAFQIRDDVLDATADADDL 224
Query: 235 PK 236
K
Sbjct: 225 GK 226
>gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus
CCMP1379]
Length = 145
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDMPWMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDVPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 281
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 154
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 155 FEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 214
Query: 227 LLDCE 231
++D
Sbjct: 215 IIDVT 219
>gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Acyrthosiphon pisum]
Length = 338
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 82/225 (36%), Gaps = 12/225 (5%)
Query: 14 KRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLT 71
+ +D L D+ ++ + D L + Y G GK +R + A N +
Sbjct: 86 RLLDDDLRDVYTDITRELELNTNQDELRTIATYYFDGQGKALRPMVAILMAHAINYHMNN 145
Query: 72 ALRVGAAIECIHC----YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
E +S +D RRGKP+V+ + +AG+ +L
Sbjct: 146 NGLDKKQREVAMIAEMIHSASLIHDDVIDQSDFRRGKPSVNALWSHKKVAMAGDYILAVT 205
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I+ SQ++ L +Q + E KT +
Sbjct: 206 SMMIARLNHNDVTITLSQIITDLVQGEFMQL------GSKETENERFAHYLTKTYRKTAS 259
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L+ + ++ A++A A + +G N+G+ FQL DDLLD
Sbjct: 260 LIANSVKAEAMLAGADDQLVDVSFEYGRNIGLAFQLVDDLLDFVS 304
>gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 124
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ I + KT AL+ + +GA +A A++ + LR + +G FQ+ DD+LD +
Sbjct: 2 ELKFIHEHKTAALIEASVCAGAYIAGATEEDIHALREYARLIGFAFQIKDDILDVIGEEE 61
Query: 236 K 236
K
Sbjct: 62 K 62
>gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
Length = 326
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 8/222 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
I+ L + + T N +L A++ A GGK +R A++ +
Sbjct: 11 AINNALGKVNQTINDRI-TIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTAAEQE 69
Query: 74 RVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ + + +D+ RRG +V + + TA+ G+ L T F+++
Sbjct: 70 KLIKIASSLEVLHMATLIHDDIIDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLLV 129
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T R+ + GQM + D + KT A+ A
Sbjct: 130 ETMTGSPYLTRNARTMRKILTG-----ELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLA 184
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
E GA H + + G+N+GI FQ+ DD+LD D
Sbjct: 185 AEEGAYFGHGDRRTINLAKRIGQNIGISFQILDDILDYSGDE 226
>gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
Length = 357
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 66 GGKAVRPALALLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 123
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T + L +
Sbjct: 124 KVHGPAQAILVGDALFALAGEVLLELGTVEAGR---AARRLTSATRALIDGQAQDISYEH 180
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + ++ KTGAL+ AC GA++ A + L +G +LG+ FQ DDLL
Sbjct: 181 RDRVSVEECLEMEGNKTGALLACACSIGAVLGGADDEVADTLETYGHHLGLAFQAVDDLL 240
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 241 GIWGDPDATGKQ 252
>gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
Zhang]
gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W]
gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II]
Length = 322
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ++I L+ + + + ++ GGK +RS L+ A L N ++
Sbjct: 14 QQLEQIQQRLEHVAVLREPQVHALIQQQIN-------AGGKMLRSGLMLMLARLGNPDND 66
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ GAAIE +H +L+HDD+ +D+ +RRG TV + AI AG+ L F++
Sbjct: 67 DLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQL 124
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + + H + G + ++ KT AL
Sbjct: 125 LSEQNP--ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSV---SEYLKAIAGKTAALFA 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +GA + EK+ FG LG+ FQ+ DDLLD +
Sbjct: 180 LATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 221
>gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 281
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 154
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 155 FEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 214
Query: 227 LLDCE 231
++D
Sbjct: 215 IIDVT 219
>gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
Length = 281
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ L V A+E IH YSLIHDDLP+MDN RRG PT
Sbjct: 35 AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 95 LHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 154
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + + E ++ G LG+IFQ+ DD
Sbjct: 155 FEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDD 214
Query: 227 LLDCE 231
++D
Sbjct: 215 IIDVT 219
>gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis]
Length = 321
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 27/221 (12%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD--- 90
+L SA Y +G GK+ R ++ A+ NV L G
Sbjct: 7 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRTRQQCIA 66
Query: 91 ------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+D+ RRG +++ A++AG+ LL+ A ++S K
Sbjct: 67 EITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTE 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + ++ L +Q D ++ +T KT +L+ +C++ A+
Sbjct: 127 VVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKT------YYKTASLISNSCKAIAL 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A + +G+NLG+ +QL DD+LD L K
Sbjct: 181 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 221
>gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus
siliculosus]
Length = 479
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 80/228 (35%), Gaps = 21/228 (9%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
T + + L A ++ GK+ R +V A + A R
Sbjct: 164 FTDTIKELVESEHPVLSMAAKHFFEKRHGKRFRPTIVALMALATCDKPMEAHRESEEYTR 223
Query: 82 I--------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ +D +RRG VH Y A++AG+ LL A +++
Sbjct: 224 QGQLGQITEMIHVASLIHDDVLDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLAR 283
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
I + + SL +Q + + L + KT +L+ AC
Sbjct: 284 LGDVQVVEIMATALDSLVQGEIMQLKMDPEKLLDI------SLYLRKSYYKTASLITNAC 337
Query: 194 ESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
+S AI+ + +G ++G+ FQ+ DD+LD D L K
Sbjct: 338 KSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILDIVGAADVLGK 385
>gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
Length = 338
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 85/237 (35%), Gaps = 13/237 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + K+++ ++ ++L+ + Q + + I Y L GK+IR L A+
Sbjct: 2 DFNEFKKMHQKKVEEYIEKVILENKVNPPKQIESLIRTLIEYCLRPGKRIRPLLFLLGAT 61
Query: 64 LF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAI 117
+ +++ R+ A IE +HC+ LIHDD+ G ++
Sbjct: 62 SYAKKELDYEKLYRIAAVIEIMHCFLLIHDDIMDRSALRRGLPSLHVVFYEEFKEKNNNE 121
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L +I+ + + + GQ LD+
Sbjct: 122 KIGEDLALVFGDILFFIAIRQLSKLNLSSKFLEEFSNCYINTGYGQTLDVLYSLGKYKPD 181
Query: 178 FMIQKMKT------GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
++ + G ++++ + +K+++ GI FQ+ DD++
Sbjct: 182 EDKISVEIARLKTAYYTFFYPFYLGVLLSNEN-IDKKKIEDAIIPAGIAFQIRDDII 237
>gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies]
Length = 427
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 27/236 (11%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASL-------------- 64
+L M +L +A Y LG GK+ R ++ AS
Sbjct: 98 SILANRLRSMILTEIPKLGTAAEYFFKLGVEGKRFRPMVLLLMASSLTIGIPEVAADCLR 157
Query: 65 FNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ LR E + +D+ RRG +++ A++AG+ L
Sbjct: 158 KGLDEEQRLRQQRIAEITEMIHVASLLHDDVLDDADTRRGVGSLNFVMGNKLAVLAGDFL 217
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A ++S K + S+++ L +Q + + ++ +T
Sbjct: 218 LSRASVALASLKNTEVVELLSKVLEHLVTGEIMQMTNTNEQRCSMEYYMQKT------FY 271
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT +LM +C++ A++A +G NLG+ +QL DD+LD L K
Sbjct: 272 KTASLMANSCKAIALIAGQPAEVCMLAYDYGRNLGLAYQLLDDVLDFTGTTASLGK 327
>gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
Length = 322
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 18/225 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +R++ + Q + +Q Q N GGK +RS L+ A
Sbjct: 15 QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + GAAIE +H +L+HDD+ +D+ IRRG TV + AI AG+ L
Sbjct: 64 DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F+++S + L + + Q KT A
Sbjct: 122 FQLLSEQDPE-----TVDLRTNARIMKRIFMGEVDQNGPSAPLIPTVNAYLSAISGKTAA 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 177 LFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221
>gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 410
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 53/240 (22%), Positives = 88/240 (36%), Gaps = 31/240 (12%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFNV----NHLTALR 74
D++ + H T L +A Y GK++R L +S + +
Sbjct: 77 DVVSERLRHSVTTGIPALKTAAEYFFRRGIEGKRLRPTLALLMSSALSPAAPSPEYLQVD 136
Query: 75 VGAAIECIHCYSLIHD---------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A E H +D+ RRG +++ TAI+A
Sbjct: 137 TRPAAEHPHEMRRRQQRLAEIAELIHVASLLHDDVIDDAQTRRGVLSLNTSVGNKTAILA 196
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL A ++S + + SQ++ L +Q + L + +
Sbjct: 197 GDFLLARASVTLASLRNSEIVELMSQVLEHLVSGEIMQMTATSEQLLDLEHY------LA 250
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +LM + S A++A A+ + +G +LGI FQ+ DDLLD L K
Sbjct: 251 KTYCKTASLMANSSRSVAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLDLTGSSSVLGK 310
>gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ;
Geranyltranstransferase (farnesyldiphosphate synthase) ;
Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 352
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 5/186 (2%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A V + A+E +H +SL+HDDL MD RR + TV
Sbjct: 62 GKAVRPALALLSAEAAGVAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWK 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ AI+ G+ L A EI+ T +L + I Q +
Sbjct: 120 VHGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTASRKLIDGQ---AQDISYEHR 176
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E + + ++ KTGAL+ A GA++ A ++L +G +LG+ FQ DDLL
Sbjct: 177 ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLG 236
Query: 230 CEEDLP 235
D
Sbjct: 237 IWGDPE 242
>gi|62752853|ref|NP_001015867.1| farnesyl diphosphate synthase [Xenopus (Silurana) tropicalis]
gi|59861885|gb|AAH90384.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
gi|124504226|gb|AAI28626.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
Length = 348
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 69/252 (27%), Gaps = 16/252 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
MN S+ QE S + I+ DL + + H + RL + Y GGK R V
Sbjct: 1 MNSHAGSERQEFSSYFEQIVQDLTAEDSGHPEVGDAITRLKEVLEYNTPGGKCNRGVTVL 60
Query: 60 ECASLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + A+ + + E
Sbjct: 61 ASYKELVGPELHKDGNLQRALAVGWCVELLQAFFLVADDIMDNSVTRRGQPCWYRKEGVG 120
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQ 168
+ A N I + + +L L Q +
Sbjct: 121 LDAVNDSFLLEASIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKVDL 180
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDL 227
+ + ++ +++ + MA A + E R +G FQ+ DD
Sbjct: 181 NRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIAGEAEHTNARTILLEMGEFFQIQDDY 240
Query: 228 LDCEED---LPK 236
LDC D K
Sbjct: 241 LDCYGDPSVTGK 252
>gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
334]
Length = 322
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ ++I L+ + + + ++ GGK +RS L+ A L N ++
Sbjct: 14 QQLEQIQQRLEHVAVLREPQVHALIQQQIN-------AGGKMLRSGLMLMLARLGNPDND 66
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ GAAIE +H +L+HDD+ +D+ +RRG TV + AI AG+ L F++
Sbjct: 67 DLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQL 124
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+S + + H + G + ++ KT AL
Sbjct: 125 LSEQNP--ATTDLATNARVMKHIFMGEVDQNGPSAPLIPSV---SEYLKAIAGKTAALFA 179
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +GA + EK+ FG LG+ FQ+ DDLLD +
Sbjct: 180 LATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 221
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 66/167 (39%), Positives = 99/167 (59%), Gaps = 7/167 (4%)
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH SLIHDDLP MDN RRGKPT H + E TA++AG+ LL++AFE I+ +
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 137 QLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFA 192
+ + R +++ L IG QG++GGQ++DI E + I KT L+ +
Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
SG I+ A+++E R+R + +G++FQ+ DD+LD E+L K
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGK 167
>gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative /
dimethylallyltransferase, putative / prenyl transferase,
putative [Arabidopsis thaliana]
gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana]
gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 422
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 37/265 (13%)
Query: 3 GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG-- 49
GG +L ++S ++ LD LL M +L SA Y G
Sbjct: 64 GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 123
Query: 50 GKKIRSFLVTECASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPS 94
GK+ RS ++ A+ NV + L + G A +
Sbjct: 124 GKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 183
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D+ RRG ++++ +++AG+ LL+ A +++ K + + + L
Sbjct: 184 LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE 243
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
++ + D ++ +T KT +L+ +C++ A++ + +G
Sbjct: 244 TMEITSSTEQRYSMDYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYG 297
Query: 215 ENLGIIFQLADDLLDCEE---DLPK 236
NLG+ FQL DD+LD L K
Sbjct: 298 RNLGLAFQLIDDILDFTGTSASLGK 322
>gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana]
Length = 423
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 37/265 (13%)
Query: 3 GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG-- 49
GG +L ++S ++ LD LL M +L SA Y G
Sbjct: 65 GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 124
Query: 50 GKKIRSFLVTECASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPS 94
GK+ RS ++ A+ NV + L + G A +
Sbjct: 125 GKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 184
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D+ RRG ++++ +++AG+ LL+ A +++ K + + + L
Sbjct: 185 LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE 244
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
++ + D ++ +T KT +L+ +C++ A++ + +G
Sbjct: 245 TMEITSSTEQRYSMDYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYG 298
Query: 215 ENLGIIFQLADDLLDCEE---DLPK 236
NLG+ FQL DD+LD L K
Sbjct: 299 RNLGLAFQLIDDILDFTGTSASLGK 323
>gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 382
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 69/244 (28%), Gaps = 22/244 (9%)
Query: 13 SKRIDTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+D + LL + + + L A A GGK+ R L+ F
Sbjct: 6 RTAVDREIQRLLGRGSTLPGALPALAHGDLWQAFARATEGGKRARPVLLLAAHEAFGGGR 65
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG----------------KPTVHIQYDE 113
A A + S + D + R P +
Sbjct: 66 HEAAVQVGAALELLHTSFVIQDDVIDGDETRRGAPNLPGSVAAEAREQGASPAGSRRLGV 125
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
I+AG+ L A ++ R + T + G L L +
Sbjct: 126 AAGILAGDLGLVAALRAVARCDAPGPVVDRLLDLFESTLHTSAAGELADVRLQLTPAEQP 185
Query: 174 ETQVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + +GA++A A + L G LGI FQL DDLL
Sbjct: 186 AALRDALAVAELKTAAYSFQLPLHAGALLAGARPAQLTALDEVGALLGIGFQLIDDLLGV 245
Query: 231 EEDL 234
D
Sbjct: 246 FGDE 249
>gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
Length = 322
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 13/231 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
+QE I+T + ++ M+++ L Y + GK++R + A +
Sbjct: 3 VQEILAPIETEMKLFEVRFHESMKSKVP-LLDKITHYIIRRKGKQMRPMFLFLTAKMLGE 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + +E +H +L+HDD+ +D+ RRG +V+ + A++ G+ +L+
Sbjct: 62 VNEKTYQSASLVELLHTATLVHDDV--VDDANERRGFFSVNALWKNKIAVLVGDYMLSRV 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
I ++ + ++ LQ ++ ++ + D + + KT +
Sbjct: 120 LLHSLENDNIRALQIVARAVREMSEGELLQIEKARKLDITEEVYFD------VIRQKTAS 173
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
L+ CES A ++ +R+R FGE +G+ FQ+ DD+ D ++ K
Sbjct: 174 LIATVCESAAASVDR-EDMADRMRNFGELVGLAFQVKDDIFDYGTPGNIGK 223
>gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan
troglodytes]
Length = 415
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHD 90
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 238
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 239 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 292
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 293 YQYGKNVGIAFQLIDDVLDFTS 314
>gi|120402584|ref|YP_952413.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
gi|119955402|gb|ABM12407.1| Polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 1155
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 77/246 (31%), Gaps = 17/246 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
GL + + L+D + + A + D + L GGK +RS +
Sbjct: 804 PGLMAWRDTVRTAVREHLEDFVRGECARRLDGGGVDVAAELLCGFLDGGKYVRSTYMYL- 862
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR---------------RGKPT 106
L TA +A + + D + R R
Sbjct: 863 GWLCGEREDTAALRASASLELLHTFALIQDDVMDSSPMRRARPSAHVALGRWHRDRALSG 922
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
++ E AI+ G+ L +A E++ R G L +
Sbjct: 923 SASRFGESAAILLGDLCLVWAEEMLRRSGVDADALARVWPRYDAMRTELAIGQLSDLLNS 982
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
Q + ++++ + E GA MA S + + L +G +G FQL DD
Sbjct: 983 CQTFPTLPEVLDVLRRKSGNYTVRRPLELGAAMAGCSADVADALSGYGAAIGEAFQLRDD 1042
Query: 227 LLDCEE 232
+L
Sbjct: 1043 ILGVFG 1048
>gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
10152]
gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
10152]
Length = 345
Score = 78.0 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 78/221 (35%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + ++ + ++ +L L +Q +A+ A GGK+ R
Sbjct: 25 DAELAATVRNGLEEVEKLLIAELSDGEDFLQD-------AALHLAKAGGKRFRPLFTILT 77
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A + MD +RRG P+V+ ++ AI+AG+
Sbjct: 78 GQL-GPRPTDPALITAGTVVELVHLATLYHDDVMDEATMRRGAPSVNSRWGNNIAILAGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A ++S I ++ L + M + D +
Sbjct: 137 YLFAHASR-LTSTLGPDAVRIIAETFAELVTGQMRETMGARESQDP------VEHYLRVV 189
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG+L+ A G + A ERL G+ +G FQ
Sbjct: 190 WEKTGSLIAAAGRFGGTFSGADTAHIERLARLGDAVGTAFQ 230
>gi|312196601|ref|YP_004016662.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311227937|gb|ADP80792.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 372
Score = 78.0 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 77/252 (30%), Gaps = 26/252 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGG-KKIRSFLVTECASLFNV 67
+ + + +L L A+ + L++ R +LGG K++RS
Sbjct: 23 DVADAVHRLLTAFLDAEAASLTDLDPSLEVLVAVARQMVLGGGKRLRSVFAFWGWRGAAG 82
Query: 68 NHLTALR-------------VGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHIQ 110
+ + S LP+ + ++ G P +
Sbjct: 83 PDRPVAPVLPALGALELLHACALVHDDVMDDSATRRGLPTAHRAVAARHVALGWPGDPDE 142
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ AI+ G+ + +A + + + + ++ + G + + +
Sbjct: 143 FGHHAAILIGDLCMVWADRLAGNAELPAATLLTAREGYDRMRLEAIAGQFLDLLGNAARD 202
Query: 171 FIDETQVFMIQK-MKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDL 227
+ + + GA++ A+ + +G +G FQL DDL
Sbjct: 203 PSPVEHALRVARLKTASYTVVRPLVYGAMLGGATGDGTLARVYTRYGLAVGEAFQLRDDL 262
Query: 228 LDCEED---LPK 236
L D K
Sbjct: 263 LGVYGDPHVTGK 274
>gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
Length = 378
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 24/243 (9%)
Query: 17 DTILDDLLLQTASHMQTQHND--RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
+ L + L ++ + +LG GK++R +
Sbjct: 33 EQRLVEFLADRRREADRLGPQFAEVVEGLSALVLGSGKRVRPAFAWLGWLGAGGDAAGPD 92
Query: 74 RVGAAIECI-----HCYSLIHDDLPS--------------MDNGYIRRGKPTVHIQYDEV 114
C L+HDD+ + + R G ++ E
Sbjct: 93 AGAVQRVCAALELLQAGLLVHDDIIDQSDLRRGEPSLHRRFEAEHSREGWSGDAARHGEA 152
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLDIQDEFI 172
AI+AG +A ++ + + R+ + G + D+
Sbjct: 153 LAILAGELAFVWADDLAAEGLDAVAGADRTAFRKVWSAMRAEVIGGQCLDVLAQAGDDES 212
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+E +I+ + E G ++A A+++ R FG+++G+ FQL DDLL
Sbjct: 213 EEAATRVIRWKTASYTVARPLELGGVLACANESLLTFYRSFGDDVGVAFQLHDDLLGVFG 272
Query: 233 DLP 235
D
Sbjct: 273 DPA 275
>gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
jejuni S3]
Length = 297
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ID ++ L + + L + + GKK+RS L+ A +
Sbjct: 1 MQKIDELIKQFLQEL------GYEPILN--MLSNVKSGKKLRSKLLLTIA------DESE 46
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D +RRG +V+ ++ A++ G+ L + AF +S
Sbjct: 47 IAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ I ++ + + + I++ + KT L+ +
Sbjct: 107 KMDARFASIISDAVVKLAIGELM-------DVDLGEKFNINKEAYLKMIYNKTAVLIEAS 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GAI+A + + +G+NLG+ FQ+ DD+LD + D
Sbjct: 160 ARCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 64/241 (26%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
++E + ID LD + Q+ + + ++RY+LL G++
Sbjct: 61 FDFQQYMKERATLIDAALD-------KSVPLQYPEIINESMRYSLLAGRR---------- 103
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
GKPT H Y E AI+AG+
Sbjct: 104 ----------------------------------------GKPTNHKVYGEEIAILAGDA 123
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL+ +FE I+ + + Q+++ + +G +G++ GQ +DI+ E E+ +
Sbjct: 124 LLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQ 183
Query: 183 MKTGALMCFACESG----AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
E+ AI+ A++ + +RLR + ++G+ FQ+ DD+LD +L
Sbjct: 184 YIHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELG 243
Query: 236 K 236
K
Sbjct: 244 K 244
>gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
3519-10]
Length = 325
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
+ + + E I+ + + MQ+ L R+ + GK++R V CA
Sbjct: 1 MANTVDEIKVPINDEMKLFEQKFYESMQSNVP-LLDKVTRFIVTTKGKQMRPMFVFLCAK 59
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L R + IE IH +L+HDD+ +D + RR +++ + A++ G+ L
Sbjct: 60 LVGSVTDKTFRGASMIELIHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYL 117
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L+ A + + K + S+ + + LQ ++ ++ + + I +
Sbjct: 118 LSKAVLLSTDHKDYDLLAVISRTIREMAEGELLQLEKARKLDITEEVYYE------IIRQ 171
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L+ CE G + ++ FG G+ FQ+ DDL D
Sbjct: 172 KTATLIAACCEIGVRSNSDDEVLAAKMMEFGTLTGMAFQIKDDLFDY 218
>gi|312867098|ref|ZP_07727308.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
gi|311097227|gb|EFQ55461.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
Length = 291
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E R++ + + + L+ ++ Y++ GGK++R L+ E F +
Sbjct: 4 EEKRNRVEQAVRSF------YEEKAVAPHLVESVLYSIQAGGKRLRPLLLLELLEAFGLE 57
Query: 69 HLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I++ + L LS ++ + + + ++ I KTG
Sbjct: 118 FGMIAASALPDVVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGR 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + + ++ + + L+ G+ LG+ FQ+ DD+LD D
Sbjct: 178 LLAYPFIAAGLILELQADIAQLLKKIGKKLGLAFQVRDDILDLVADFE 225
>gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 322
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 18/232 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L + R+ ++ + ++ ++ + + L GK +R + A
Sbjct: 10 SLDSDLLRVREVILTHIRNSSPTIREGLEELI-------LAQGKMLRPSFLLLTARCGKF 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A + AAIE +H +LIHDD+ +D+ RRG P VH + AI+ G+ L +
Sbjct: 63 SKKKAYDIAAAIEMLHIATLIHDDV--IDDADTRRGVPAVHTKIGIRKAILMGDYLFSRC 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F I + T S + + + Q D I KT A
Sbjct: 121 FSIAAQYATIENGRSLSTAVGFICQSEI------DQSTKEYDFAISRRTYLRRIAGKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L + +GA + ++ + R G +G+ FQ+ DD+LD L K
Sbjct: 175 LFLLSFHAGASQSKMNKTQVMWARRAGYAIGMAFQIIDDILDYTGSKEVLGK 226
>gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens]
Length = 414
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 118 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 177
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 178 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 237
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 238 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 291
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 292 YQYGKNVGIAFQLIDDVLDFTS 313
>gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
MA-4680]
Length = 344
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + A+E +H +SL+HDD+ MD +RRG+P +
Sbjct: 63 GKGVRQALAVLGAEAAGGPAEAGVPAAVAVELVHTFSLLHDDI--MDGDAMRRGRPALWK 120
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
Y A++AG+ L A + +++ R L +L
Sbjct: 121 AYGTGPAVLAGDALFALAVQTLTTASAPGA-AHRLSAALGDLVRGQADDLLFAHRPWTGP 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E + + + + KTG+L+ A GA +A A + L G +LG+ FQ+ DDLL
Sbjct: 180 EAVSVAEYEAMAEHKTGSLLGCALALGAHLAGAPEETAAVLDRTGRHLGVAFQIVDDLLG 239
Query: 230 CEEDLP 235
D
Sbjct: 240 IWGDPA 245
>gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE]
gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE]
Length = 285
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 20/227 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
K ++ +D ++ + +I ++L GK++R V A + A
Sbjct: 8 KAVNAGIDRIISAVEL-------PEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDA 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A+ECIH SLI DD+ E + Y
Sbjct: 61 TDAALAMECIHTASLIQDDIVDEGLKRRGEDTSH------EKFGMFLAMVSGDYLISRAM 114
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ + + + + + E + KT + +
Sbjct: 115 MLMSKYDEKTILAFSKAGLYMAEGELLDVKSRKYKPTEADYVEC----VRKKTAIMFESS 170
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPKK 237
E GA +A A + E R G GI +Q+ DDL++ + D KK
Sbjct: 171 FEMGARIAGADEKHAELCRLMGMEFGIAYQIVDDLIEYTQIDDEHKK 217
>gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa]
gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 27/221 (12%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNV---------------NHLTALRVGAA 78
+L SA Y +G GK+ R ++ A+ NV L + A
Sbjct: 7 PKLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRKRQQSIA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +D+ RRG ++++ A++AG+ LL+ A ++S K
Sbjct: 67 EITEMIHVASLLHDDVLDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVALASLKNTE 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L + +Q + + ++ +T KT +L+ +C++ A+
Sbjct: 127 VVTLLATAVEHLVNGETMQMTSTSEQRCSMEYYMQKT------YYKTASLISNSCKAIAL 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A + +G+NLG+ +QL DD+LD L K
Sbjct: 181 LAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTGTSASLGK 221
>gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
Length = 328
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 14/205 (6%)
Query: 39 LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIHD 90
L Y G GK R +V + N ++ + ++ ++
Sbjct: 32 LRDMSHYYFDGQGKAFRPMVVLLMSRACNFHNGAAENSLALPSQRRISMIAEMIHTASLV 91
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D RRGK V + + AI+ G+ +LT + ++ ++ L +
Sbjct: 92 HDDVIDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALA---AIGNKDVVILLSQVI 148
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + M G D + F + KT +L+ +C + A+++ +S++ +E
Sbjct: 149 EDLVRGEFMQLGTKEDEDERFAHYLKKTF---KKTASLLAHSCRAVAVLSGSSKDVQEVA 205
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
+G+NLGI FQL DD+LD
Sbjct: 206 YQYGKNLGIAFQLVDDMLDFMSTEE 230
>gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
japonicus yFS275]
gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
japonicus yFS275]
Length = 381
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 35/258 (13%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ ++++ KR+ + +L H+Q ++ Y L GK++R LV +
Sbjct: 37 ATLIRDDLKRVSPGMRRMLGCNLDHLQD-------ASTYYTLAQGKQLRPSLVLLVSRAV 89
Query: 66 NVNHLTALRVGAAIECI------------------------HCYSLIHDDLPSMDNGYIR 101
++ + V + + + +D R
Sbjct: 90 SLLNGINRSVASERYILDCNPALLLDGDVLPSQLRLAQITEMIHVASLLHDDVIDLATHR 149
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RG+ + +I + A+ AG+ +L A ++ + + + ++ L LQ +
Sbjct: 150 RGQVSGNIAFGNQQAVFAGDFILARASTAMARLRNTRVTELLATVIADLIRGEFLQ-LRN 208
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+KT +L+ +C + A++ A + + + FG LGI F
Sbjct: 209 VDEKGGDALQASFDYYLEKSYLKTASLISKSCMAAAVLGKAVPSIVQAIGEFGRCLGIAF 268
Query: 222 QLADDLLDCE---EDLPK 236
QL DD LD + DL K
Sbjct: 269 QLVDDALDFKSTDGDLGK 286
>gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 329
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 78/227 (34%), Gaps = 9/227 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ +E R+D L + S + + IR GK++R LV +
Sbjct: 2 NFLNYWRETRSRLDQELRCQIPMLFSALPPPQIKTIQQIIRD----GKRVRGCLVCLINN 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
AL AIECI SLIHDD D +R + A
Sbjct: 58 ALGGKTEDALPRAIAIECIQAASLIHDDYVDEDIIRRKRPAT-----WTVEGPRRAVLLG 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
I S ++ + T G L QM + ++ I +
Sbjct: 113 DVIFATAIQSMVELGNEDGATVARAIATVANGAYQELSWQMDGGEANLLEAGIYDRIIYL 172
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KTGAL AC+ GAI A Q FG G +Q+ADDL D
Sbjct: 173 KTGALFGAACQLGAIATGAPQETSASAYAFGTRTGEAYQIADDLQDF 219
>gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From
Campylobacter Jejuni
gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From
Campylobacter Jejuni
Length = 291
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 23 LLLQTASHMQTQH--NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAA 78
+ ++ + A+ L GGK R+ L+ L V A
Sbjct: 9 FIHHLEKNLPKVESFHPFFNEALALXLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALA 68
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E IH YSLIHDDLP+ DN RRG PT+H YDE TAI+ G+ L T AF ++S +
Sbjct: 69 LEFIHTYSLIHDDLPAXDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKD 128
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ I+ L+ + + +D+ + ++ + KT L+ A + G
Sbjct: 129 EIKIKLIKTLAFNAGLNGXVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKXGCE 188
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + E ++ G LG+IFQ+ DD++D
Sbjct: 189 ICELNNEESNQIYKLGLKLGLIFQINDDIIDVT 221
>gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630]
Length = 145
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P+MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDMPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALPEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis
HTCC2503]
gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis
HTCC2503]
Length = 317
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 18/231 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L + + ++ D L + + A GGK++R + A L
Sbjct: 2 LSGQLESTNQVILDHLASSVPLIPEV-------ARHLIAAGGKRLRPLMTLAAAELCGET 54
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A+E IH +L+HDD+ +D +RRG T +I + +++ G+ L AF
Sbjct: 55 GEGPRLLAGAVELIHAATLLHDDV--VDESALRRGLRTANIVFGNKESVLVGDFLFARAF 112
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E++ + I S+ + LQ + Q + + KT AL
Sbjct: 113 ELMVRTGSIEVLGILSKASCIIAEGEVLQLTTSQNLETPQTIY------LDVISAKTAAL 166
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A E+GA++A + +R +G N GI +QL DD LD + L K
Sbjct: 167 FAAAAEAGAVVAGGDAEKVAAMRAYGLNFGIAYQLVDDALDYQSSGAVLGK 217
>gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 263
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D +RRG+ T + ++ +++ G+ L + AF+++ + ++
Sbjct: 47 FIHTATLLHDDVVDISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLLVELGSMPLMSL 106
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ ++ LQ G + F + + KT L A E AI++ A
Sbjct: 107 MADTTNTIAEGEVLQLTKAGDPATDE------EAYFSVIESKTAVLFAAATEGAAILSGA 160
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S + R R +G NLG FQLADD+LD D K
Sbjct: 161 STEDAARWRRYGLNLGNAFQLADDVLDYLGDPEK 194
>gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2
[Sus scrofa]
Length = 421
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + + A+ I ++
Sbjct: 126 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVH 185
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 186 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 245
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 246 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 299
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 300 QYGKNVGIAFQLIDDVLDFTS 320
>gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana]
Length = 422
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 37/265 (13%)
Query: 3 GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG-- 49
GG +L ++S ++ LD LL M +L SA Y G
Sbjct: 64 GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 123
Query: 50 GKKIRSFLVTECASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPS 94
GK+ RS ++ A+ +V + L + G A +
Sbjct: 124 GKQFRSTILLLMATALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 183
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D+ RRG ++++ +++AG+ LL+ A +++ K + + + L
Sbjct: 184 LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE 243
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
++ + D ++ +T KT +L+ +C++ A++ + +G
Sbjct: 244 TMEITSSTEQRYSMDYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYG 297
Query: 215 ENLGIIFQLADDLLDCEE---DLPK 236
NLG+ FQL DD+LD L K
Sbjct: 298 RNLGLAFQLIDDILDFTGTSASLGK 322
>gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653]
gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653]
Length = 365
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + + A+E +H +SL+HDDL MD RR + TV
Sbjct: 72 GGKAVRPALALLSAQAAGADPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T +L + I Q +
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGTAEAGRATRRLTSATRKLIDGQ---AQDISYEH 186
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DD+L
Sbjct: 187 RERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDVL 246
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 247 GIWGDPVSTGKQ 258
>gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_27]
gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_27]
Length = 326
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 15/237 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +R+ + L+ S ++Q L + + GK +RS L+ CA L
Sbjct: 2 IEILLKEWIERVKYYIH--LIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + L +D+ RRGK ++ +Y + A+ AG+ L
Sbjct: 57 GSNWKDHKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ F + +I S+ + + Q + Q + ++ + +
Sbjct: 117 IARIFYYGAMENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFEN------IER 170
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KT AL A GA A S+ ++L+ F +NLG++FQL DD+LD +L K+
Sbjct: 171 KTAALFQAASYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|62959227|gb|AAY23721.1| farnesyl diphosphate synthase [Microbulbifer sp. JL-463]
Length = 142
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLPSMD+ +RRGKPT H+ Y E TAI+ G+ L AFE +++ ++ +
Sbjct: 1 HDDLPSMDDDSLRRGKPTCHVAYGEATAILVGDALQCSAFEALATLSEPEFVAPLTRALA 60
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
+ + G+ + ++ + ++E Q+ + ++KTGAL+ + A++A+ +++E
Sbjct: 61 RASGSRGM-ILGQTLDIEAEGSLLNEHQLEQMHRLKTGALIDASVAMPALLANVTKDEVS 119
Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
L + LG+ FQ+ DD+LD E
Sbjct: 120 ALTKYSRALGLAFQIQDDILDVE 142
>gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 297
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 6 GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 63
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ L A EI+ T T + L +
Sbjct: 64 KVHGPAQAILAGDALFALANEILLELGTLEAGR---AARRLTTASRALIDGQAQDISYEH 120
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 121 RERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLL 180
Query: 229 DCEEDLP 235
D
Sbjct: 181 GIWGDPE 187
>gi|46241272|gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65
++ Q I++ ++ L + + + + + + + + L L
Sbjct: 36 TRTQTYRATIESDIESYL---KKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 92
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+ AA+ +H + H++LP D + + ++D ++ G+G++
Sbjct: 93 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSK---SEIQHKFDPNIELLTGDGIIP 149
Query: 126 YAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQK 182
+ E+++ T+ + + ++ LT +G +G++ GQ ++ +++ + + + K
Sbjct: 150 FGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCK 209
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
K G L GAI+ +++ E+LR FG +G
Sbjct: 210 KKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 245
>gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S]
gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S]
Length = 373
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 22/242 (9%)
Query: 16 IDTILDDLLLQTASHMQT---QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ L + A ++T + + + + + L GGK++R V +
Sbjct: 26 VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 85
Query: 73 ---------------LRVGAAIECIHCYSLIHDDLPSM----DNGYIRRGKPTVHIQYDE 113
+ I S P++ + + ++
Sbjct: 86 EAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGR 145
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+ G+ L +A ++I R + S L G +++ +
Sbjct: 146 AVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGDETV 205
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
E + + + + GA +A A R FG ++GI FQL DDLL D
Sbjct: 206 EAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGVFGD 265
Query: 234 LP 235
Sbjct: 266 PE 267
>gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771]
Length = 194
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 4/136 (2%)
Query: 1 MNGG---LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
M+ ++L+ N++ I+ +L LL A + + L SA+ YA+L GGK++R F
Sbjct: 1 MDANRDTFETRLKNNAREIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPF 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV E A+L + ALR+GAA+EC+HCYSL+HDDLP+MD+ +RRGKPTVHI++DE TA
Sbjct: 61 LVVESAALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATA 120
Query: 117 IIAGNGLLTYAFEIIS 132
I+AG+ LLTYAF+I++
Sbjct: 121 ILAGDSLLTYAFDIVA 136
>gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo
abelii]
Length = 415
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHD 90
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ I +Q++ L
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVICILTQVIEDL 238
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 239 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 292
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 293 YQYGKNVGIAFQLIDDVLDFTS 314
>gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST]
gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST]
Length = 346
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 14/228 (6%)
Query: 16 IDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
++ L + + ++ L Y G GK R + A N +
Sbjct: 27 LEDELKYIFEDIRQEISRATNHQELNKIAVYYFDGQGKAFRPMVAILMAKALNYHMHNEN 86
Query: 74 RVGAAIECI------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ ++ +D + RRGKP+V++ ++ AG+ +L A
Sbjct: 87 SDVMNAQRQIAMISEMIHTASLVHDDVIDQSFARRGKPSVNVLWNHKKVTQAGDYILAVA 146
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+++ K +I SQ++ L +Q + + +T KT +
Sbjct: 147 SMLLARLKHDEVTHILSQVLTDLVQGEFMQLGSKETENERFAHYFTKT------YRKTAS 200
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + ++ A+++ A + E +G NLG+ FQ DDLLD
Sbjct: 201 LIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLDFVSSSE 248
>gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens]
gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1; AltName: Full=Trans-prenyltransferase 1;
Short=TPT 1
gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens]
gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens]
gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a
[Homo sapiens]
Length = 415
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 238
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 239 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 292
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 293 YQYGKNVGIAFQLIDDVLDFTS 314
>gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus]
Length = 346
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK IR LV A AL A+E H +SL+HDD+ MD RR +PT
Sbjct: 61 GGKAIRPALVLLAAEAVGGAADAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LL AF+++++ + + +Q +L GQ D+
Sbjct: 119 TVFGVSPAILAGDALLALAFDVLATAG------HPAAPEATRIFGAAIQELLEGQNADMA 172
Query: 169 DEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + ++ KTGAL+ AC GA++ + + E LR FG +LG+ FQL D
Sbjct: 173 FERRQDVELAECLVMAAGKTGALLGCACALGALLGGGAPEQVEHLRAFGRDLGLAFQLVD 232
Query: 226 DLLDCEED---LPK 236
DLL D K
Sbjct: 233 DLLGIWGDPQVTGK 246
>gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
Length = 268
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ + A+E IH YSLIHDDLP+MDN RR PT
Sbjct: 24 AGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPT 83
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S +++ L+ + +
Sbjct: 84 LHKSYDETTAILVGDALNTEAFLLLSRLNLSATISLKLVETLAFNAGLNGMIIGQAIDCY 143
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ ++ ++ + KT L+ + + G + + ++L G LG+IFQ+ DD
Sbjct: 144 FEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQINDD 203
Query: 227 LLDCE 231
++D
Sbjct: 204 IIDAT 208
>gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
Length = 389
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 22/242 (9%)
Query: 16 IDTILDDLLLQTASHMQT---QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
++ L + A ++T + + + + + L GGK++R V +
Sbjct: 42 VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 101
Query: 73 ---------------LRVGAAIECIHCYSLIHDDLPSM----DNGYIRRGKPTVHIQYDE 113
+ I S P++ + + ++
Sbjct: 102 EAPAALRAASALELVQACALVHDDIIDASTTRRGFPTVHVEFADQHSAHHWSGGSAEFGR 161
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+ G+ L +A ++I R + S L G +++ +
Sbjct: 162 AVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRTEVLGGQFLDISSEVRGDETV 221
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
E + + + + GA +A A R FG ++GI FQL DDLL D
Sbjct: 222 EAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDLLGVFGD 281
Query: 234 LP 235
Sbjct: 282 PE 283
>gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
Length = 275
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GKK+RS L+ A N + A + +D +RRG +V+
Sbjct: 8 GKKLRSKLLLAIA---GENANSYKICAAIEL---IHLASLLHDDIIDESKLRRGAKSVNA 61
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ A++ G+ L + AF +S I ++ + + +
Sbjct: 62 EFGTKNALMLGDILYSKAFYELSQLDACFASIISDAVVKLAVGELM-------DVEFSKS 114
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
D+ + + KT L+ + GAI+A+ + +G+NLG+ FQ+ DD+LD
Sbjct: 115 FNADKDKYLKMIYNKTAVLIEASARCGAILANLDEK---AFGEYGKNLGLAFQMIDDILD 171
Query: 230 CEEDLP 235
+ D
Sbjct: 172 IKGDEK 177
>gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
Length = 175
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
++F I K KT AL+ + E GA++ A+ E+E+L FGE +G+ FQ+ DD+LD
Sbjct: 47 ELFFIYKKKTAALLSASLEIGALLGGANPEEQEKLSSFGEKIGLAFQIRDDILDEISSFS 106
Query: 233 DLPK 236
+L K
Sbjct: 107 ELGK 110
>gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
Length = 277
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 18 TILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-R 74
L++ + + H + L+ + GGK R+ L+ +
Sbjct: 3 EEFHKHLMRNLPQIPSFHPFFNEALAVM--LKAGGKYFRAQLLLNVVYFYKKERFKEALD 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E IH YSLIHDDLP+MDN RR PT+H YDE TAI+ G+ L T AF ++S
Sbjct: 61 AALALEFIHTYSLIHDDLPAMDNADFRRSTPTLHKSYDETTAILVGDALNTEAFLLLSRL 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+++ L+ + + +D+ ++ ++ + KT L+ + +
Sbjct: 121 NLSATISLKLVETLAFNAGLNGMIIGQAIDCYFEDQKLNLKELEFLHTHKTAKLIAASLK 180
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
G + + ++L G LG+IFQ+ DD++D
Sbjct: 181 MGCQICELDETITKQLYELGLKLGLIFQINDDIIDAT 217
>gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 331
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/248 (20%), Positives = 87/248 (35%), Gaps = 35/248 (14%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-------------AIRYALLGGK 51
L + L RI+ LD + ++ L + A GG
Sbjct: 4 LKAYLATELPRINKTLDAEVAVLHPLVRPVAEHVLRAGGKRLRPLLTLLTARALGAEGGG 63
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
R + + ++E +H +L+HDD+ +D +RRG P H +
Sbjct: 64 LFR-----------KSSGPDLYPLACSVELLHSATLLHDDI--LDGADLRRGLPAAHTMF 110
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ ++AG+ LL A I++ ++ ++ ++
Sbjct: 111 GQTETVLAGDALLALANRIVARYGDARLTETIAEAIVQTATGEIVEIAHQRSTD------ 164
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KT ++ +CE GA+ A A + FG NLGI FQ+ DD LD
Sbjct: 165 HGHDTYIDIITGKTAWMLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFA 224
Query: 232 E---DLPK 236
D K
Sbjct: 225 ASSKDTGK 232
>gi|323463187|pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
Length = 273
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65
++ Q I++ ++ L + + + + + + + + L L
Sbjct: 4 TRTQTYRATIESDIESYL---KKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+ AA+ +H + H++LP D + + ++D ++ G+G++
Sbjct: 61 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSK---SEIQHKFDPNIELLTGDGIIP 117
Query: 126 YAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQK 182
+ E+++ T+ + + ++ LT +G +G++ GQ ++ +++ + + + K
Sbjct: 118 FGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCK 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
K G L GAI+ +++ E+LR FG +G
Sbjct: 178 KKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 213
>gi|229891676|sp|P0C9E2|TPRT_ASFK5 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ S+ +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSEEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K+N + + + + +D + K
Sbjct: 164 MQGFQNICRQVDWIKENCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ + + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGTIEDIGAIERAAHCFGNAFQLADDIKDHDTDTG 267
>gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 326
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +R+ + L+ S ++Q L + + GK +RS L+ CA L
Sbjct: 2 IEILLKEWIERVKYYIH--LIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ + L +D+ RRGK ++ +Y + A+ AG+ L
Sbjct: 57 GTNWKNNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ F + +I S+ + + Q + Q + ++ + +
Sbjct: 117 IARIFYYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQENISEKKYFEN------IER 170
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KT AL A GA A S+ ++L F +NLG++FQL DD+LD +L K+
Sbjct: 171 KTAALFQAASYIGAKEAGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 452
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 84/235 (35%), Gaps = 15/235 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
+ T L + + T H L + +Y GGKK+R +V + VN L+
Sbjct: 125 VQTELQSVTESIKQILGTDHP-VLSTVAKYFFEQDGGKKVRPTMVLLMSQAAEVNRLSNE 183
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD--EVTAIIAGNGLLTYAFEII 131
+ + L + + + I + N + I+
Sbjct: 184 LPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDDVIDEAEMRRGIQSVNRVFGDKLSIL 243
Query: 132 SSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDIQDEFIDET-----QVFMIQK 182
+ + ++ + ++ + ++ ++ G+++ +++
Sbjct: 244 AGDFLLARSSVCLARLRNVKVVELMSTIIEHLVKGEVMQMRNVQNRSNISLLEYYLRKNY 303
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
KT +LM +C++ + + E +G +LG+ FQL DD+LD E + K
Sbjct: 304 YKTASLMANSCKAALTLGQHTDYVCEMGFAYGRHLGLAFQLIDDVLDYEGLESGK 358
>gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
Length = 326
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 6/220 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I +D ++ +++D + + + GGK +R + + +
Sbjct: 10 EIQKEIDAVVELIGQRANVRNSDIKAAIVDLSTAGGKYLRPAFFFFFSQFGDQEQKNRDQ 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ + + +D+ +RRG+ T+ Q+ + A+ G+ L T FE+I
Sbjct: 70 LRQIAASLEILHMATLIHDDVIDDSPLRRGQKTIQTQFGKDVAVYTGDFLFTIFFELILE 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + L+ M ++ D KT L A
Sbjct: 130 SMQDSPYMTINAKAMKQILIGELEQMEL-----YFNQEQDVESYLTAISGKTAELFQLAS 184
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ GA A ASQ+ G ++G+ FQ+ DD+LD D
Sbjct: 185 QEGAYFAGASQDVVSLAGRIGHHIGMTFQILDDILDYTAD 224
>gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
Length = 329
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 75/224 (33%), Gaps = 15/224 (6%)
Query: 22 DLLLQTASHMQTQHND---RLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
DLL + S + + + R SA+ Y GGK IRS L+ A T+ G
Sbjct: 4 DLLPRVLSLLPNRGDRPELRAFSAMLRDYPERGGKGIRSELLLASARAHGALPSTSAWEG 63
Query: 77 AAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A + D+ RRG+P +H Y AI G+ L + +
Sbjct: 64 ALWLAAGLELFQNWVLIHDDIEDDSEERRGRPALHRLYGVPVAINVGDALHASMWAAVHR 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFA 192
++ L + + + E + + +
Sbjct: 124 AGVPGGLEEFLNMVWRTAEGQHL----DLTWVQERSWNLGEADYLAMVRLKTALYTVVVP 179
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ A + ER GE LG FQ+ DD+L+ D K
Sbjct: 180 LRLGALAAGVLPD--ERFTAAGEALGAAFQIRDDVLNLAGDPAK 221
>gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
Length = 334
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 91/239 (38%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L ++L E ++ L D + A R+ + GGK++R L
Sbjct: 11 DPALSARLTERLALVEERLRDAVTHADQLAD--------DAARHLVNAGGKRLRPLLTLL 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + + + +E H +L HDD+ MD+ +RRG P+ H + AI+ G
Sbjct: 63 TAELGDGSRREVVDAATVVELTHLATLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++ + + + + + +
Sbjct: 121 DLLFARASATVAGLGPDAVRIQAATFERLCLGQLH-------ETVGPRPGEDPVAHYLQV 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +L+ + GA+ A + + FGE LG+ FQLADD++D D K
Sbjct: 174 LADKTASLVATSARFGAMFAGCRPDVVRTVTGFGEKLGVAFQLADDVIDLTSDGTLTGK 232
>gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 289
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTA 72
RI+ L + + RL A+R+A+ GG ++R L A+ ++ A
Sbjct: 6 RIEQALAAAI---DTVAVPGCPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDYAAA 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
G AIE +HC SL+HDDLP D+ +RRG P+VH + E A++AG+ L+ AFE ++
Sbjct: 63 DAAGVAIELLHCASLVHDDLPCFDDSPLRRGVPSVHRAFGEPLAVLAGDALIILAFEHLA 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ +L L GM G E + V + KTG+L A
Sbjct: 123 RVLADSPE----RLAPLLLTISRSVGMPHGITAGQAWECEPQVTVEEYHRAKTGSLFTAA 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+GA+ + + E G+ +G +Q+ADDL D
Sbjct: 179 TAAGAL---VAGADAEAWSVVGDKIGEAYQVADDLRDV 213
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 43 IRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
+RYALL G ++ L L AA E +H SL+HDD P MD+
Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H+ Y E A++ G+ LL+ +F ++ + D + + IG
Sbjct: 61 RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120
Query: 161 GGQM-----------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
G + E + ++ I KT AL+ + GAI+ S + E
Sbjct: 121 IGSEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIES 180
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
LR + ++G++FQ+ D L+
Sbjct: 181 LRMYARSIGLLFQVVD--LEMTGSTE 204
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ + + + +IGL + + E + ++ I KT AL+ + GAI+
Sbjct: 175 DEQIESLRMYARSIGLLFQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILG 234
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
S + E LR + ++G++FQ+ DD+LD E+L K
Sbjct: 235 GGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGK 273
>gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 339
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 88/229 (38%), Gaps = 6/229 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S +E R+D L+ + S + +Q + + I+ GK+IR LV
Sbjct: 9 DFVSYWKETRTRLDQELNRQIPVLFSALGSQQIETIQQIIKD----GKRIRGCLVFLMNQ 64
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+L AIECI SLIHDD +D IRR +P A++ G+ +
Sbjct: 65 TQEGKPEDSLPRAVAIECIQAASLIHDDY--LDEDVIRRKRPATWTIEGPRRAVLLGDIM 122
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A + ++ + + + + +++ I +
Sbjct: 123 FATAIQSMAELSKEDGATVAHAIATVANGAYQELFWQTKTGKSRAHKLLEKDLYEHIIYL 182
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGAL AC+ GAI A A Q FG G +Q+ADDL D
Sbjct: 183 KTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAYQIADDLEDFIA 231
>gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1
[Sus scrofa]
Length = 410
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + + A+ I ++
Sbjct: 115 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVH 174
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 175 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 234
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 235 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 288
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 289 QYGKNVGIAFQLIDDVLDFTS 309
>gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34]
gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29]
gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354]
Length = 145
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
gamma proteobacterium EB000-45B06]
gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium
562]
Length = 316
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
+ + ++ K ++ +L +++ + + + Y GK++R+ L +S
Sbjct: 4 KNLINKDLKEVNNLLRKNIIKEKT---------ISNLYAYIFKKNGKQLRARLSLIASSA 54
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L++ A IE +H +L+HDD+ +D RRG +V+ + ++ G+ +
Sbjct: 55 DRRQGKKRLKLAAIIELLHNATLVHDDV--VDESPTRRGVKSVNNIWTNAHGVLIGDYIY 112
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AF ++ S ++ +Q I + I +++ I K
Sbjct: 113 SKAFMLMVELGNSKILEELSNATNDISKGELIQL------DAIANTGISLSELEDISYFK 166
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
TG L + + GA++ ++ ++ + +NLGI+FQ+ DDLLD
Sbjct: 167 TGRLFEASAKCGALLCNSKKSYVNSISECAKNLGIVFQIKDDLLDYLG 214
>gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1
[Macaca mulatta]
Length = 415
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHD 90
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 238
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 239 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 292
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 293 YQYGKNVGIAFQLIDDVLDFTS 314
>gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
Length = 331
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 12/224 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLS--AI--RYALLGGKKIRSFLVTECASLFN---VNHLTA 72
L ++ L + L A+ Y GGK IRS L+ A
Sbjct: 5 LQNMALSLLPTPEAAPRPELRDFYAMLRDYPQRGGKGIRSELLLLSAQAHGLAEGGAGWE 64
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A + + +D+ RRG P +H + A+ AG+ L Y + +
Sbjct: 65 RALWLAAALELFQNWVLIHDDIVDDSDERRGAPALHKLHGVPLALNAGDALHAYMW---A 121
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + D S+ + + Q + + + + M++ +
Sbjct: 122 AVQKAGLDAGFSEFLTMIHRTAEGQHLDVSWVEHGEWNLQPADYLEMVRLKTGFYTIVTP 181
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ A G +LG FQ+ DD+L+ D K
Sbjct: 182 LRLGALAAGQPP--HPDFEAAGLSLGTAFQIRDDVLNLTGDPAK 223
>gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 405
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 89/238 (37%), Gaps = 21/238 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIRSFL 57
L + +D L L ++ A+ + A GK IR L
Sbjct: 76 LDRARELVDPSLRAALETLPGPLRRI-------AMYHFGWEDADGAPTAGSAGKAIRPAL 128
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A + A+ A+E H +SL+HDD+ +D RR +PT + AI
Sbjct: 129 VLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWTVFGTADAI 186
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
IAG+ L++ A I++ +L + Q + + +
Sbjct: 187 IAGDALVSLALRILAEDGHPASAAAAGRLSACMIELCAGQQADC-AFEGRGPQEVTLAEC 245
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ KTGAL+ +C GA+ A A L FG G+ FQL DDL+ D
Sbjct: 246 VEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPG 303
>gi|322389034|ref|ZP_08062602.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
gi|321144257|gb|EFX39667.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
Length = 291
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E R++ + + + L+ ++ Y++ GGK++R L+ E F +
Sbjct: 4 EEKRNRVEQAVRSF------YEEKAVAPHLVESVLYSIQAGGKRLRPLLLLELLEAFGLE 57
Query: 69 HL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LTEPHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I++ + LS ++ + + + ++ I KTG
Sbjct: 118 FGMIAASALPDAVKVSLIFELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGR 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + + ++ + + L G+ LG+ FQ+ DD+LD D
Sbjct: 178 LLAYPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADFE 225
>gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1]
Length = 444
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 84/277 (30%), Gaps = 51/277 (18%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + + + L + + H +A Y GK +R +V + +
Sbjct: 74 DPLRSVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATYLCPK 133
Query: 71 TA------------------------LRVGAAIECIHCYSLIHD---------------- 90
T + +
Sbjct: 134 TPATVPTVTHRGVDTSLSPAQILADVNPAAHPLSSPEQEIADANSDILPSQRRLAEIAEL 193
Query: 91 -------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+D+ RRG P+ ++++ A++AG+ LL A ++ + +
Sbjct: 194 IHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNPEVVELL 253
Query: 144 S-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + + + T +KT +L+ +C + A++ +
Sbjct: 254 ATVIANLVEGEFMQLKNTERDERNPKWSEETVTYYLQKTYLKTASLISKSCRAAALLGNT 313
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ +G NLG+ FQL DDLLD DL K
Sbjct: 314 DAVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGSDLGK 350
>gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 389
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 7/231 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTECASL 64
L + +D L L ++ A G GK IR LV A
Sbjct: 60 LDRARELVDPSLRAALETLPGPLRRIAMYHFGWEDADGAPTAGSAGKAIRPALVLAAARA 119
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+ A+E H +SL+HDD+ +D RR +PT + AIIAG+ L+
Sbjct: 120 LGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWTVFGTADAIIAGDALV 177
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ A I++ +L + Q + + + + K
Sbjct: 178 SLALRILAEDGHPASAAAAGRLSACMIELCAGQQADC-AFEGRGPQEVTLAECVEMAVAK 236
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ +C GA+ A A L FG G+ FQL DDL+ D
Sbjct: 237 TGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPG 287
>gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str.
Paraca]
Length = 211
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 79/208 (37%), Gaps = 9/208 (4%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GK++R +V + +H +
Sbjct: 11 VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ SQ+++ L QG+ KT +L+ +
Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQGLNRFDTSLSI------EAYLEKSYYKTASLIANSS 183
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIF 221
++ +++ S E L +G N+G+ F
Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAF 211
>gi|62959169|gb|AAY23692.1| farnesyl diphosphate synthase [Erythrobacter litoralis]
Length = 145
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQLVDLESEGKTDASVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 7/207 (3%)
Query: 31 MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ D + Y G GK IR +V A T ++
Sbjct: 42 IPEDTTDEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGS 101
Query: 90 -DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
+D RRGK + + ++ A++AGN +++Y+ ++++S ++ I S+++
Sbjct: 102 LVHDDVIDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRIIE 161
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L + Q + + + + KT +L+ + E+ A++ + ++
Sbjct: 162 DLIYGELCQLESVNSNHEHRYKQYIKKTYL-----KTASLIANSAEAVAVLTDQPAHVQQ 216
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
FG+ LGI FQ+ DD LD D
Sbjct: 217 AAFNFGKYLGIAFQIQDDRLDFLADSE 243
>gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 364
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 73 GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 130
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 131 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTATRKLIDGQ---AQDISYEH 187
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A ++L +G +LG+ FQ DDLL
Sbjct: 188 RERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLL 247
Query: 229 DCEEDLP 235
D
Sbjct: 248 GIWGDPE 254
>gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 7/207 (3%)
Query: 31 MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ D + Y G GK IR +V A T ++
Sbjct: 42 IPEDTTDEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGS 101
Query: 90 -DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
+D RRGK + + ++ A++AGN +++Y+ ++++S ++ I S+++
Sbjct: 102 LVHDDVIDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRIIE 161
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L + Q + + + + KT +L+ + E+ A++ + ++
Sbjct: 162 DLIYGELCQLESVNSNHEHRYKQYIKKTYL-----KTASLIANSAEAVAVLTDQPAHVQQ 216
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
FG+ LGI FQ+ DD LD D
Sbjct: 217 AAFNFGKYLGIAFQIQDDRLDFLADSE 243
>gi|73654130|gb|AAZ79360.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-378]
Length = 145
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/145 (40%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T R++L+
Sbjct: 1 HDDLPWMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L G +GM GGQM+D +++ D QV +Q++KTGAL+ + E GA++
Sbjct: 61 TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120
Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
+ LR + ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145
>gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
367]
Length = 325
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 72/219 (32%), Gaps = 9/219 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA
Sbjct: 17 TALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYLFSTFGNATTPAQLQAGA 73
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A I + D D+ R + Y +++ S +
Sbjct: 74 AAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLQSTTDR 133
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
M + Q E I KT L +C GA
Sbjct: 134 SLIQNHIDAMRRILQGELHQM------DLNYREDITLDAYLNEIAGKTAELFALSCYQGA 187
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+A A Q+ + R G +G +Q+ DD+LD D K
Sbjct: 188 QLAGAPQSVIDHTREIGIAIGCAYQMLDDILDYAGDPKK 226
>gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC
3773]
Length = 299
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE-CASLFNVNHLTALRVGA 77
+D L Q + T + + YA+L GGK++R L +S AL++
Sbjct: 15 IDAQLAQDLKQITTDA--QFSEMMAYAVLNGGKRLRPLLTLAVISSFQQATTPQALKLAT 72
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI------I 131
A+E +H YSL+HDDLP+MDN +RRG+P+VH ++ E AI+ G+ LLT AFE+ +
Sbjct: 73 AVEWVHSYSLVHDDLPAMDNDLLRRGQPSVHAKFGEAAAILVGDALLTGAFEVVTTANAL 132
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTG 186
+ +T++ D ++ L H G GM+ GQM D+ + + I KT
Sbjct: 133 APDETKIPDQTIVTIVQDLAHFSGAAGMVIGQMHDMGNHGQNLQTETDWLLQEIYTPKTA 192
Query: 187 ALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQLA 224
AL+ FA + GA +A + + FG + G+ FQ+
Sbjct: 193 ALIQFAAKLGAQLATLQQTQVPEATQAMTQFGLDFGLAFQIQ 234
>gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus]
Length = 418
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDD 91
L Y G GK R +V A N++H A A+ ++
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 183 DDIIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 242
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 243 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 296
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 297 QYGKNVGIAFQLIDDVLDFTS 317
>gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 367
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A++++ T +L + I Q +
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQ---AQDISYEH 190
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 191 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250
Query: 229 DCEEDLP 235
D
Sbjct: 251 GIWGDPE 257
>gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus
leucogenys]
Length = 397
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHD 90
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 101 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLV 160
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 161 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 220
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 221 VRGEFLQL------GSKENESERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 274
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 275 YQYGKNVGIAFQLIDDVLDFTS 296
>gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
NRC-1]
gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase
[Halobacterium salinarum R1]
gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
NRC-1]
gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase
[Halobacterium salinarum R1]
Length = 300
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 77/241 (31%), Gaps = 18/241 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
++ I+ + + + L + + L GGK++R L
Sbjct: 2 EYVEARRAAIEQRITE-------AVGGVEPTELGDQLEHVVLAGGKRVRPTLTVLVCEAA 54
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
T AA+ S +D G ++ + + +
Sbjct: 55 GGAVWTGAAEAAAVRENAALSAGGEDALDYAVGVELVHNASLVVDDIIDRSELRRGSASA 114
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------MLGGQMLDIQDEFIDETQVF 178
+A + L ++ + G+ +++ E +
Sbjct: 115 WAEYGYGPGIVASDGLLGEAFALFSRDPRAMECVTDSLVELGEGEAIELVARPETEREYM 174
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ + KTGAL A E GAI A A ER + E +G+ FQ+ DD+LD D L
Sbjct: 175 ELARRKTGALFRAAAELGAIAADADGRAVERFGEYAERVGVAFQIRDDVLDATADSDALG 234
Query: 236 K 236
K
Sbjct: 235 K 235
>gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Ailuropoda melanoleuca]
Length = 467
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 15/208 (7%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 172 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVH 231
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 232 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLV 291
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 292 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 345
Query: 212 CFGENLGIIFQLADDLLDCEE---DLPK 236
+G+N+GI FQL DD+LD ++ K
Sbjct: 346 QYGKNVGIAFQLIDDVLDFTSCSDEMGK 373
>gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
ATCC 27064]
Length = 343
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 7/231 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTECASL 64
L + +D L L ++ A G GK IR LV A
Sbjct: 14 LDRARELVDPSLRAALETLPGPLRRIAMYHFGWEDADGAPTAGSAGKAIRPALVLAAARA 73
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+ A+E H +SL+HDD+ +D RR +PT + AIIAG+ L+
Sbjct: 74 LGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWTVFGTADAIIAGDALV 131
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ A I++ +L + Q + + + + K
Sbjct: 132 SLALRILAEDGHPASAAAAGRLSACMIELCAGQQADC-AFEGRGPQEVTLAECVEMAVAK 190
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ +C GA+ A A L FG G+ FQL DDL+ D
Sbjct: 191 TGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLIDDLIGIWGDPG 241
>gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538]
Length = 145
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLPSMDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
DSM 5456]
gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
DSM 5456]
Length = 312
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L E+ K++ +++DD + Q + + H R+ Y GGK+ R FLV E A
Sbjct: 11 LVEHWKKLRSLVDDAIKQWIARLPEAHAVRVAE---YIARGGKRFRGFLVLEIARSLGGR 67
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL A+E IH SL DD+ +D RRG+ ++Y ++ L+T+A
Sbjct: 68 IEDALDAAVAVELIHASSLALDDI--IDEDVERRGQKAAWVEYGVKKTVMTVYLLVTFAH 125
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ + L+++ L L + K+KT +L
Sbjct: 126 KIVEERYGFRATSRTITATLNISRGEVLDAFTDPDSLPPEY-------YLETVKLKTASL 178
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
A E GAI+A E +GE LG+++Q+ADD++D
Sbjct: 179 FRLAGELGAIVAGREDLYGEA-GLYGEYLGLMYQVADDIVD 218
>gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris]
Length = 365
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 70 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVH 129
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 130 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIEDLV 189
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 190 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 243
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 244 QYGKNVGIAFQLIDDVLDFTS 264
>gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1]
gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1]
Length = 320
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 19/229 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------ 67
+T + ++L + D + GGK++R + A
Sbjct: 4 AAFETRMREVLRSDVEFIAIIGEDLV-------TAGGKRVRPLVTLLAAQALGAGPDALA 56
Query: 68 -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+H + ++ +S +D+ RRG+ T ++ V ++++G+ +L
Sbjct: 57 TSHSWDELLRLSVCVELLHSASLLHDDLIDDSDKRRGQETAFRRFGNVVSVMSGDFMLAR 116
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+S + + Q F + KT
Sbjct: 117 LLGELSGMPGS-----PALTRAFGQAASVICEGEVLQFQVASYADYSFENYFQVIHGKTA 171
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
AL+ A ++ A++ A + ++ L FG G+ FQ+ DDLLD +
Sbjct: 172 ALLELAAQAPAMLLGADDSARDALSTFGREYGMAFQMQDDLLDLLGEEA 220
>gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818]
Length = 303
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ L+ + +++ ND +L+ + L GK +RS L+ + V+ +
Sbjct: 3 LEFALERIKAYIDMYIKECGNDEVLNLSSH-LSQGKMLRSKLLLAIS---GVSEDSLRAC 58
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
L +D RR KP+++ + AI+ G+ L + AF +S
Sbjct: 59 ALIEMIQSASLL---HDDVIDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLD 115
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+L ++ S ++ I + ID+ + KT AL+ A E
Sbjct: 116 VRLAQSVSSAVVRLSIGEI-------EDVSLASRFHIDKQAYIKMCGNKTAALIVAAAEC 168
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GAI+ ++N R +GENLGI FQ+ DD+LD +D L K
Sbjct: 169 GAILKGLNKNI---YRIYGENLGIAFQIIDDILDFTQDSKTLGK 209
>gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus]
gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus]
Length = 418
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDD 91
L Y G GK R +V A N++H A A+ ++
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 183 DDIIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 242
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 243 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 296
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 297 QYGKNVGIAFQLIDDVLDFTS 317
>gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
Length = 356
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A+ + A+E +H +SL+HDDL + R
Sbjct: 71 GGKAVRPALALLSAAAAGAGVEVGVPGAVAVELVHNFSLLHDDLM-DGDTERRHRTTVWV 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ L ++ +P R + + G L + D
Sbjct: 130 QWGASSAILCGDAMLALAQEVLLEAPSPHAAPAARLLAVTTRELIRGQAEDLAFESRDDV 189
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + KTG+L+ + GA++A A + E L +G +G+ FQL DDLL
Sbjct: 190 GV----DECLSMAAGKTGSLLAASASIGAVLAGAPAAQTEALHTYGHEVGMAFQLVDDLL 245
Query: 229 DCEEDLP 235
D
Sbjct: 246 GIWGDPG 252
>gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
Pyrophosphate Synthase
gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
Pyrophosphate Synthase
Length = 348
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 95/251 (37%), Gaps = 36/251 (14%)
Query: 16 IDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECAS 63
++ LD LL M +L SA Y G GK+ RS ++ A+
Sbjct: 4 VEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMAT 63
Query: 64 LFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+V + L + G A + +D+ RRG +++
Sbjct: 64 ALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLN 123
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++AG+ LL+ A +++ K + + + L ++ +
Sbjct: 124 VVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSM 183
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
D ++ +T KT +L+ +C++ A++ + +G NLG+ FQL DD+L
Sbjct: 184 DYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDIL 237
Query: 229 DCEE---DLPK 236
D L K
Sbjct: 238 DFTGTSASLGK 248
>gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
Length = 590
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 81/236 (34%), Gaps = 19/236 (8%)
Query: 8 KLQENSKRIDTI-----LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + ID LD ++ + L A GK+ R FL
Sbjct: 232 DLSQLRDDIDFWFTPLNLDSIMGPAEGETEKISRQWLGRA-------GKRWRPFLTVAAY 284
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ + DN R G+PT+H ++ A+
Sbjct: 285 QALRTTPGAPIPDDLRKVAVAVECFHKASLIHDDIEDNDAQRYGEPTLHEEHGIAVALNV 344
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ L+ + ++++ + + + + +G + Q + + T+V
Sbjct: 345 GDLLIGEGYRLLAACNASPEQKVAMLRIAAEGQRELCRGQGAELVWARQPQPLTSTEVLD 404
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + KT A + G + A + +E L+ + E LGI +Q+ DDL DL
Sbjct: 405 IFRKKTAPAFGVALQLGTVYAGQLEEHEEVLQAYSEALGIAYQIRDDL----SDLG 456
>gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
marinum M]
gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
marinum M]
Length = 340
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 19/211 (9%)
Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
+ L GGK++R + ++ +D RRG
Sbjct: 24 EFVLSGGKRLRPIFAYRGWQAVTTEDPDPDLLLLFSALELLHAWALIHDDVIDASSTRRG 83
Query: 104 KPTVHIQYDEVTA-------------------IIAGNGLLTYAFEIISSPKTQLKDNIRS 144
+PT H+ + + +S R
Sbjct: 84 RPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIISRVSQSSLSPDAQRRV 143
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
Q + S L G + + + + + + + GA A
Sbjct: 144 QRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAAAAADRP 203
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +E FG +LG+ FQL DD+L D
Sbjct: 204 DVQEAFHQFGTDLGVAFQLRDDVLGVFGDPA 234
>gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 367
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A++++ T +L + I Q +
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQ---AQDISYEH 190
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 191 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250
Query: 229 DCEEDLP 235
D
Sbjct: 251 GIWGDPE 257
>gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39]
gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51]
gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61]
gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351]
Length = 145
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 7/194 (3%)
Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
L Y + GK++R V A + + + A ++ +D
Sbjct: 7 LLNRITHYIVNRKGKQMRPMFVFLVAKMVSNGEVKERTYRGASVIELIHTATLVHDDVVD 66
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ RRG +++ + A++ G+ LL+ + + I S + ++ L
Sbjct: 67 DSNKRRGFFSINALWKNKIAVLIGDYLLSKGLLLSIDNEDFDLLKIISVAVREMSEGELL 126
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
Q ++ + + + I + KT L+ C GA + E E +R FGE
Sbjct: 127 QIEKARKLDITETIYYE------IIRQKTATLIAACCSLGAASVKPNTLEVETMRKFGEL 180
Query: 217 LGIIFQLADDLLDC 230
+G+ FQ+ DDL D
Sbjct: 181 IGMAFQIKDDLFDY 194
>gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
Length = 354
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 75/218 (34%), Gaps = 10/218 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
L D + +DR+ + GGK++R LV A + +
Sbjct: 43 ALADAERLLRERTRDASDDRVRELTGHLAATGGKRMRPLLVLLAAEFGDPGSEGVAQAAV 102
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
E +H SL HDD+ + V A+ +++
Sbjct: 103 VAELVHLASLYHDDVV---------DRAAVRHGAASANALWGNRAAAQGGNWLLARGARL 153
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
D + L L+ + +++ + F + KT AL+ + GA
Sbjct: 154 SADLVPDALALNARTANRIVEGQLLELVGPEPGADPVAHYFRVAAGKTAALLAMSLGVGA 213
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A + + L +GE LG+ FQ+ADDLLD
Sbjct: 214 FQAGAPRAAADALVEYGEQLGLAFQIADDLLDLRSSEA 251
>gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305]
gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia
pseudomallei NCTC 13177]
gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305]
gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
Length = 363
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 13/229 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + + R L D L ++ + GKKIR L+ ASLF
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76
Query: 67 VNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ + +D +RRG +V AI+ G+
Sbjct: 77 ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A + + D +L+L + ++ + + + F +
Sbjct: 137 LQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L ACE GA ++ A++ E L +G +LGI FQ+ DD+ D
Sbjct: 197 DRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDF 245
>gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca]
Length = 363
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 15/208 (7%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 68 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVH 127
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 128 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLV 187
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 188 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 241
Query: 212 CFGENLGIIFQLADDLLDCEE---DLPK 236
+G+N+GI FQL DD+LD ++ K
Sbjct: 242 QYGKNVGIAFQLIDDVLDFTSCSDEMGK 269
>gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
Length = 206
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
+ E + ++ L+ S + + + ++RY+LL GGK+IR L
Sbjct: 68 EFKEYVLEKAVSVNKALE-------SAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L TA+ A+E IH SLIHDDLP MDN +RRGKPT H Y E A++AG+
Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180
Query: 123 LLTYAFEIISSPKTQLKDNIRSQ 145
LL AFE I++ + + +
Sbjct: 181 LLALAFEHIATHTKGVSSDRIVR 203
>gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR51-B]
gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR51-B]
Length = 292
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVGAAI 79
DL A+ + +L +A+ YA+ GG ++R L A+ + A AI
Sbjct: 11 DLERAVAAGADERCPPQLANALHYAVFPGGARVRPQLCMAVAAANTGKDPSLAKSAACAI 70
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E +HC SL+HDDLP D+ +RRGKP+VH + E A++ G+ L+ AF++++ +
Sbjct: 71 ELLHCASLVHDDLPCFDDATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATAR 130
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
R ++ + + + Q + +
Sbjct: 131 YPDRGPAVMGYVADGVA-----APCGIAAGQAWECEQRVDLALYHQSKTGALFIAATCAG 185
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A A+ + R G ++G +Q+ADD+ D D+
Sbjct: 186 AAAAGVDPTPWRNLGASIGEAYQVADDIKDATSDIE 221
>gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114]
Length = 145
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP+MDN +RRGKP H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPAMDNDDLRRGKPANHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|289740703|gb|ADD19099.1| farnesyl pyrophosphate synthase [Glossina morsitans morsitans]
Length = 425
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 67/224 (29%), Gaps = 11/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLTALRVG 76
I+ DL + + L + Y +L GKK R+ L L L++
Sbjct: 101 DIIRDLTEHADKYNSKDASTWLKKVLEYNILHGKKFRALLTILTYKNLVKDVTAENLKLA 160
Query: 77 AAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
+ + MDN RRG+ H + A + + + ++
Sbjct: 161 QILGWCLELLQCFLVLNDDIMDNSTTRRGQTCWHRLDNVGLIAFNDSIMVESGIYVLLKK 220
Query: 134 PKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ L + M I Q + F T + + F
Sbjct: 221 YFSHLDCYVDLMHMFHEMTFITTCGQSLDMLNSNKSVSTFTMNTHKAIAANKTSHYTFYF 280
Query: 192 ACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
+ +A + E LR +G FQ+ DD LDC
Sbjct: 281 PIAAAMHLAGL--KDAEALRQTKMIAMEIGHFFQVQDDFLDCFG 322
>gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
Length = 367
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 79/226 (34%), Gaps = 15/226 (6%)
Query: 25 LQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ H + L A+ + GGK +R A+R AA+E +H
Sbjct: 38 ARAKEHFSGRSEGALAETAVPEFVAGGKCLRPLFAYVGWRCGQPESDAAVRAAAALELLH 97
Query: 84 CYSLIHDDLPS--------------MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
C++L+ DD+ + +G ++ E AI+ G+ L ++ +
Sbjct: 98 CFALVQDDVMDGSALRRGRTALHVRFARWHEEQGWAGSAPRFGESAAILFGDLFLVWSEQ 157
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++ + R G L + D + +T + ++++ +
Sbjct: 158 MLRESGLAAEQLARGWGHYDAMRAELAVGQLADLVNDARALPSWDTLLDVLRRKSGNYTV 217
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E GA +A L FG +G FQL DDLL D
Sbjct: 218 RRPLEFGAALAGCGPELMAGLGEFGGLVGEAFQLRDDLLGVFGDPA 263
>gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950]
Length = 359
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 15/245 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
E +R+ + + + Q + + + + + + GGK +RS V
Sbjct: 8 DDFGEWRSEVRRRVLVEVAEFVAQRRAADLDGAGIEAVGDILADFVSGGKCLRSTFVYLG 67
Query: 62 A----------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK----PTV 107
+ + + S + PS + R + P
Sbjct: 68 WLCGAPADPAALRAAASFELVHAFALLQDDVMDGSDVRRGRPSAHRQFGRWHRERGLPGA 127
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
++ E AI+ G+ L +A +++ + + G + D
Sbjct: 128 SRRFGESAAILLGDLCLIWAEQMLRDSGIDPRRLQLAWPRYDAMRTELAVGQFADLINDA 187
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ E + + ++ + E GA MA + +L +G +G FQL DD+
Sbjct: 188 RQAPGLEFVLDVARRKSGNYTVRRPLEIGAAMAGCGAHTLCQLGRYGRAVGEAFQLRDDV 247
Query: 228 LDCEE 232
L
Sbjct: 248 LGVFG 252
>gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
Length = 325
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 84/223 (37%), Gaps = 8/223 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+++ + ++ + M ++ L + + GK++R V A +
Sbjct: 4 VEQIKAPVAHEMELFEKKFQLAMASRIA-LLNRITHFIVNRKGKQMRPMFVFLVAKMIGD 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A ++ +D+ RRG +V+ + A++ G+ LL+
Sbjct: 63 GEVNDRTYRGASVIELIHTATLVHDDVVDDSLKRRGFFSVNALWKNKIAVLVGDYLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S + ++ LQ ++ ++ + D I + KT
Sbjct: 123 LLLSIDNGDFDLLQIISVAVREMSEGELLQIEKARRLDITEEVYYD------IIRKKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L+ C GA + E++R FGE +GI FQ+ DDL D
Sbjct: 177 LIAACCSLGACAVSPGSQDVEKMREFGEMIGIAFQIKDDLFDY 219
>gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia
pseudomallei 7894]
Length = 363
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 13/229 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + + R L D L ++ + GKKIR L+ ASLF
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76
Query: 67 VNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ + +D +RRG +V AI+ G+
Sbjct: 77 ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A + + D +L+L + ++ + + + F +
Sbjct: 137 LQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L ACE GA ++ A++ E L +G +LGI FQ+ DD+ D
Sbjct: 197 DRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDF 245
>gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii]
gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
Length = 301
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 20/242 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
+LQ + T LD+LL Q D + +A+R AL GK++R L+ A
Sbjct: 14 ELQALRDALQTRLDELLP------PGQERDLVCAAMREGALTPGKRVRPLLLILAARDLG 67
Query: 67 VNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A+E +H SL+ DD+P MDN +RRGKPT+H QY E AI+A LL
Sbjct: 68 CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 127
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-- 182
+ AF +++ L D+ ++Q + L+ +GLQG++ GQ D+ + + ++
Sbjct: 128 SRAFGVVA-QANPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 186
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL---LDCEE-----DL 234
+KT L + AI A AS + + +LR F +LG FQL DDL L+ D
Sbjct: 187 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLADGLNHTGKDINKDA 246
Query: 235 PK 236
K
Sbjct: 247 GK 248
>gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
7_1]
gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
7_1]
Length = 326
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------GGKKIRSFLVTECASLFNVNH 69
I+ +L + + Q ++ + + + A+L GK RS L+ CA L +
Sbjct: 2 IEILLKEWIEQIKYYIHLIADYSIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSNWK 61
Query: 70 LTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ + L +D+ RRGK ++ +Y + A+ AG+ L+ F
Sbjct: 62 NNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMARIF 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +I S+ + + Q + Q + ++ + KT AL
Sbjct: 122 YYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFKN------IERKTAAL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
A GA + S+ ++L F +NLG++FQL DD+LD +L K+
Sbjct: 176 FQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNPKELGKE 227
>gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
D11]
Length = 326
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------GGKKIRSFLVTECASLFNVNH 69
I+ +L + + Q ++ + + + A+L GK RS L+ CA L +
Sbjct: 2 IEILLKEWIEQIKYYIHLIADYSIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSNWK 61
Query: 70 LTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ + L +D+ RRGK ++ +Y + A+ AG+ L+ F
Sbjct: 62 NNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMARIF 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +I S+ + + Q + Q + ++ + + KT AL
Sbjct: 122 YYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFEN------IERKTAAL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
A GA + S+ ++L F +NLG++FQL DD+LD +L K+
Sbjct: 176 FQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
43049]
gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
43049]
Length = 280
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 29 SHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
+ + + + L +R+ AL GGK++R + A+ IE +H SL
Sbjct: 17 AVLDSVEPEELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASL 76
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ +D +RRG P + AIIA +GLL AF + S +
Sbjct: 77 VIDDI--IDESELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLFS-----------TDER 123
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
T + + + G+ +++ E +E + + + KTGAL A E GAI A +
Sbjct: 124 AMQTVSESMVELGEGEAMELVAEPSNEKEYMELARRKTGALFRAAAELGAIAADSDPYTV 183
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E + + E +G+ FQ+ DD+LD D
Sbjct: 184 EAVGQYAERVGVAFQMRDDVLDATADAE 211
>gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
gamma proteobacterium EBAC20E09]
Length = 314
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 92/240 (38%), Gaps = 24/240 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M + + + K ++ ++ + + + + + Y GKKIRS L
Sbjct: 1 MTVNI--DITKELKAVEKLIKSDINKEKTILGLYN---------YIFKSDGKKIRSRLNL 49
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+S + L + +DN RRG +V+ + ++
Sbjct: 50 IASSSSKNSDRYKLASIIELLHTATLV----HDDVVDNASTRRGAISVNSLWSNAHGVLI 105
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ + + AF ++ + ++ +Q I + I ++
Sbjct: 106 GDYIYSKAFMLMVEIGKTDILAELADATNDISQGELIQL------DAISNIKISLNKLKK 159
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPKK 237
I KTG L + ++GA++A A++N + + +N+GI+FQ+ DDLLD K+
Sbjct: 160 ISYFKTGRLFEASAKTGAMLAGANKNFIKNISESAKNIGILFQIKDDLLDYSNSSKTGKQ 219
>gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 371
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 69/239 (28%), Gaps = 17/239 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVN 68
R+ + + + + + +R L GK +RS + +
Sbjct: 27 SRLRDRVLAAITEFVDARCADALAGGPVDVAEDVLRGLLADGKCLRSTFLYVGWR-CGAD 85
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNG---------------YIRRGKPTVHIQYDE 113
A AA + D ++ + G ++ E
Sbjct: 86 GTDAAIRAAASLEFLHAFALMQDDVMDESPMRRGRPTAHRAFANWHHANGLSGSSTRFGE 145
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A++ + L +A +++ R+ G + D
Sbjct: 146 SAAVLLADLCLVWAEQMLRESGVDAAALDRAWPRYDTMRTELAVGQFADLVNDTATFPSL 205
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + ++ + E GA +A + + L +G +G FQ+ DDLL
Sbjct: 206 DAVLDVARRKSGNYTVRRPLEIGATLAGCDERQLSALAGYGSAVGEAFQMRDDLLGVFG 264
>gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7]
gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus
tokodaii str. 7]
Length = 283
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 23/227 (10%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S +++ + ID ++DD L+ +LL +Y L GK+ R L
Sbjct: 2 DLLSYWKKSKEIIDKLVDDYLVDIKDW-------QLLEVSKYILKDGKRFRGTLTFLFTE 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
N + A + A E +H SL DD+ +D IRRG + Y I N L
Sbjct: 55 ALNGDIKNAYKAALASEILHSASLALDDI--VDYDIIRRGGSSAWAIYTNRKVIFITNYL 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A IIS T ++ ++ + L +G + G ++ ++
Sbjct: 113 IPSALNIIS---TYGEEALKISIQLWKDTAVGALKDIFGSP----------SEYLSTIEL 159
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L + A A ++ E G+ +GI +QL DD +DC
Sbjct: 160 KTSSLFKLSTML-ASFASHREDLVEETLDIGKYIGIAYQLVDDYIDC 205
>gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
Length = 363
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 13/229 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ + + R L D L ++ + GKKIR L+ ASLF
Sbjct: 25 ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76
Query: 67 VNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + A+ + +D +RRG +V AI+ G+
Sbjct: 77 ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDIIDAAPLRRGIASVVGARGIDMAILVGD 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A + + D +L+L + ++ + + + F +
Sbjct: 137 LQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFKVA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT L ACE GA ++ A++ E L +G +LGI FQ+ DD+ D
Sbjct: 197 DRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFDF 245
>gi|255583629|ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 87/212 (41%), Gaps = 13/212 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKK-IRSFLVTECASLFNVNHLTALR 74
I+ ++ L + + + + + + + L L + AL
Sbjct: 52 INADIETHLKE---AIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACELVGGSRDQALA 108
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133
+A+ + + H+++P D +P H + ++ G+G++ +AFE+++
Sbjct: 109 AASALRLMIAAAFTHENIPLTDRPRPS-ARPMFHHTFGPNIELLTGDGMIPFAFELLAQL 167
Query: 134 -PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMIQKMKTG 186
Q + ++M+ ++ +G QGM+ GQ + Q + + + K K G
Sbjct: 168 NNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEG 227
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
A A GAI+ ++ E E+LR +G +G
Sbjct: 228 ASHACAGACGAILGGGNEEEIEKLRRYGLYVG 259
>gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
Length = 362
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 66/255 (25%), Gaps = 31/255 (12%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA--LLGGKKIRSFLVTECASLFNVNH 69
+ +D L + + + A + GGK++R +
Sbjct: 10 DLAVVDAALVSFVQHQRTRLDPLGPPLADLVDAAAAYVSGGKRLRPAFCLAGWRVATATP 69
Query: 70 LTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++E + +L+HDDL + R + + G+
Sbjct: 70 DDTPVPEAVAVAAGSLEWLQGSALVHDDLMDGSDTRRGRPSVHRDFEQRHRREAMVGDPA 129
Query: 124 LTYAFEIISSPKTQLKDNI-----------------------RSQLMLSLTHNIGLQGML 160
A + L R+ +L + + G
Sbjct: 130 GFGAATAVLMGDLMLSWCDEMLRSAGHRPGPFTGADGAARLARAFEVLDVCKTEVVAGQF 189
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + E + +++ + GA + Q L LG
Sbjct: 190 LDVVNQTRPESSAAEAMLVVRYKAAKYTVERPLHLGATLGGGDQALMAGLSAVALPLGEA 249
Query: 221 FQLADDLLDCEEDLP 235
FQL DD+L D
Sbjct: 250 FQLRDDVLGVFGDPA 264
>gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
[Equus caballus]
Length = 379
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N +H + V A+ I ++
Sbjct: 84 ELKEMSEYYFDGKGKAFRPIIVVLMARACNSHHDNSRDVQASQRSIALIAEMIHTASLVH 143
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 144 DDVIDDARSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 203
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 204 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 257
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 258 QYGKNVGIAFQLIDDVLDFTS 278
>gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus]
Length = 385
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H A + A+ I ++
Sbjct: 90 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 149
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 150 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLV 209
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 210 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 263
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 264 QYGKNVGIAFQLIDDVLDFTS 284
>gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus]
Length = 383
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H A + A+ I ++
Sbjct: 88 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 147
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 148 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLV 207
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 208 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 261
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 262 QYGKNVGIAFQLIDDVLDFTS 282
>gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus
(Silurana) tropicalis]
gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis]
Length = 292
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 12/195 (6%)
Query: 44 RYALLG-GKKIRSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDN 97
Y G GK R LV A N+++ + A ++ +D
Sbjct: 3 DYYFDGKGKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDVIDG 62
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
RRGK TV + E A++AG+ +L+ A ++ + + + +
Sbjct: 63 SDSRRGKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVI---ALISQIAIDLVRGE 119
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ G + + F + KT +L+ +C++ +++A E +G+N+
Sbjct: 120 FLQLGSKENENERFSHYIEKTF---KKTASLIANSCKAVSVLACPDPAVHEIAYQYGKNI 176
Query: 218 GIIFQLADDLLDCEE 232
GI FQL DD+LD
Sbjct: 177 GIAFQLIDDVLDFTS 191
>gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_22]
gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22]
gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
sp. 2_1_22]
gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
XB1A]
gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22]
Length = 324
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 84/224 (37%), Gaps = 8/224 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I+ L D S + + + GK +R LV A L+
Sbjct: 3 SISLIRTPIEAELRDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGA 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL +
Sbjct: 63 VCPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLTGDYLLATS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I + + + + + + + KT A
Sbjct: 121 ---LVHAELTNSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFD---VIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L ++ A + E E R GE +GI FQ+ DD+ D
Sbjct: 175 LFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF 218
>gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
15434]
gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
15434]
Length = 405
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 45/266 (16%)
Query: 16 IDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------- 65
+D L +L + + + + LL A L GGK++R+ L +L
Sbjct: 37 VDARLAQVLQERRARYEDLGEAATELLDAAEVLLKGGKRMRALLAGLGIALDSHGPARTA 96
Query: 66 ----------NVNHLTALRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKPTVHIQY 111
+ + +L P+ + + G T + +
Sbjct: 97 LLSSPLVASAGAALELYQASALVHDDVIDAALTRRGEPAAHRRLAQVHRDHGWLTEPLTF 156
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------- 164
AI+ G+ LL+ E + T++ + + + + GQ
Sbjct: 157 GTSGAILLGDLLLSACGEEMGHAVTEVGVSPAAATAARQAFDRMTSEVAVGQYLDLRSEV 216
Query: 165 ---------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCF 213
+ + + ++++ + + GA++A + RL F
Sbjct: 217 VPLPGPEENPVEAGQTMHRNALGVVRRKSARYSVMYPLLIGALLAGVDPDCALAARLAQF 276
Query: 214 GENLGIIFQLADDLLDCEED---LPK 236
GE +GI FQL DDLL D K
Sbjct: 277 GEEVGIAFQLRDDLLGVLGDPQVTGK 302
>gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449]
gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 303
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 23/222 (10%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ + + + + L + Y GK +RS L+ + + +
Sbjct: 8 ERIKAYIHTYVQECKNEEVNALYGHLSY----GKMLRSKLLLSISDMNEDALRVCALIEM 63
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+D RRG P+++ + AI+ G+ L + AF +S +
Sbjct: 64 IQSASLL------HDDVIDESLTRRGIPSINATFGNKNAIMLGDVLYSKAFYELSCLDVR 117
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
L ++ S ++ I + D+ + + KT AL+ A E GA
Sbjct: 118 LAQSVSSAVVRLSVGEI-------EDVKLSLSFHTDKERYIRMCADKTAALIVAAAECGA 170
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I+ ++N R +GENLGI FQ+ DD+LD +D L K
Sbjct: 171 ILKGLNKNI---YRIYGENLGIAFQIIDDILDITQDSQTLGK 209
>gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 352
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 81/241 (33%), Gaps = 25/241 (10%)
Query: 15 RIDTILDDLLLQTASHMQTQHN------DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
R+D +L L + A+H+ D+L A + GK++R+
Sbjct: 13 RVDGVLRSFLDEEAAHLAAVDAALAPVADQLRKAAGH----GKRLRAAFCYWGWRAAGQP 68
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYI--------------RRGKPTVHIQYDEV 114
AL AA + + + D D+ R
Sbjct: 69 ESDALVRAAASMELVHAAAVVHDDLIDDSRLRHGLPTAHVALEAVLARDGRPDARTAARS 128
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A++ G+ L+ A + ++ R++ + ++ + G ++L
Sbjct: 129 LAMLVGDQLMVLAGLLFTTSGLPAAYLARARDLWAVLARELVAGECL-EILHTGGPPDTG 187
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
T + +++ + G ++A A+ ++ R + LG FQL DDLL D
Sbjct: 188 TSLKVVRYKTAKYTVEHPLLIGGLLAGAAPALRDTYRAYALPLGEAFQLRDDLLGLFGDP 247
Query: 235 P 235
Sbjct: 248 E 248
>gi|296876934|ref|ZP_06900979.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
gi|296432065|gb|EFH17867.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
Length = 291
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
+E R++ + + + L+ ++ Y++ GGK++R L+ E F +
Sbjct: 4 EEKRNRVEKAVRSF------YEEKAVAPHLVESVLYSIQAGGKRLRPLLLLELLEAFGLE 57
Query: 69 HLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+V A+E IH SLIHDDLP+MDN RRG+ T H ++ E AI+AG+ L
Sbjct: 58 LTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEALAILAGDALFLDP 117
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I + + L LS ++ + + + ++ I KTG
Sbjct: 118 FGMIVASALPDAVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGR 177
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L+ + + ++ + + L G+ LG+ FQ+ DD+LD D
Sbjct: 178 LLAYPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADFE 225
>gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 383
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 90/236 (38%), Gaps = 10/236 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVT 59
+ L + + K I I+ + + + A+ + S + Y R L+
Sbjct: 34 DATLEGFISKTKKSIHAIITEYVRKPAALVSDAAAAERYSEMLFDYINRPSHYTRPMLLM 93
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A +++ L + AA++ + LIHDD+ D +RRG PT+H Y A+
Sbjct: 94 LTALMYDNQDPATLLLAAAVQLSQEWILIHDDIE--DKSEMRRGMPTLHKLYGSSAALHI 151
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG------LQGMLGGQMLDIQDEFID 173
G+ L + + + IR +L Q + D +
Sbjct: 152 GDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYSTASGQFQELNFMYGKDGLRSAKE 211
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
T + + M + GAI A +N E+L GEN GI FQ+ DD++D
Sbjct: 212 STYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLGAIGENAGIAFQINDDIID 267
>gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 337
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL----------LG-GKKIRSFLVTECASLFNVN 68
+++ L + + + ++ + + IRY L LG K++R L+ + +
Sbjct: 14 IEEHLARATASI-SESQGEIEAMIRYHLGVHAAPPARPLGHSKRVRPLLLLTAHAALGGD 72
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
AL AIE +H +SLIHDD+ D +RRG+ ++ + A+ AG+ L AF
Sbjct: 73 WRAALPAAVAIEYVHGFSLIHDDIE--DRSPLRRGRASLWAVWGVDRALNAGDALFALAF 130
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTGA 187
++ + ++T L + Q + ++KTGA
Sbjct: 131 RVMGDLADHFDARWVVETYQAMTDACIALSAGQELDLAFEQVENVSIEQYLAMAELKTGA 190
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
L A E AI+A + ++ LR G LG++FQ+ DD D DL K
Sbjct: 191 LFGAALEVAAILAGQPPSVRDDLRNAGRKLGVLFQILDDFHDLFGREEDLGK 242
>gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
Length = 346
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 82/221 (37%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + ++E K+++ +L L + +A+ A GGK+ R
Sbjct: 26 DPQLAATVREGLKQVEELLVSELSDGEDFLTE-------AALHLAKAGGKRFRPLFTVLT 78
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L V AA + MD +RRG P+ + ++ AI+AG+
Sbjct: 79 AQL-GPKASDPSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGD 137
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A ++S+ + I +T + L G+ + +
Sbjct: 138 YLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGLRGEQDPV-------EHYLKVV 190
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG+L+ G + A + +RL G+ +G FQ
Sbjct: 191 WEKTGSLIAACGRFGGTFSGADADHVKRLERLGDAVGTAFQ 231
>gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 356
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 65 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 122
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A++++ T +L + I Q +
Sbjct: 123 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTATRKLIDGQ---AQDISYEH 179
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 180 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 239
Query: 229 DCEEDLP 235
D
Sbjct: 240 GIWGDPE 246
>gi|62959233|gb|AAY23724.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-435]
Length = 145
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/145 (40%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T R++L+
Sbjct: 1 HDDLPGMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L G +GM GGQM+D +++ D QV +Q++KTGAL+ + E GA++
Sbjct: 61 TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120
Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
+ LR + ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145
>gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens]
Length = 415
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 12/202 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 179 HDDVIDDVSSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDL 238
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ ++E KT +L+ +C++ +++ E
Sbjct: 239 VRGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 292
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
+G+++GI FQL DD+LD
Sbjct: 293 YQYGKDVGIAFQLIDDVLDFTS 314
>gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
DSM 15952]
gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
DSM 15952]
Length = 326
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 73/221 (33%), Gaps = 6/221 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I L + + ++ D + + ++ GGK +R A L + +
Sbjct: 11 IQNKLQVVCSFLEKQLTVRNKDIQDALVEFSQAGGKYLRPAFFFLFAELGDPKKQNEEEL 70
Query: 76 GAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
I + +D+ +RRG TV Y + A+ G+ L T FE++
Sbjct: 71 IKVASSIELLHMATLIHDDIIDDSPLRRGTLTVQAHYGKDIAVYTGDLLFTLFFEVLIDV 130
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + GL QM + + KT L AC
Sbjct: 131 MNGSPF-----MATNAQAMKGLLLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACL 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA S + G N+GI FQ DD+LD +
Sbjct: 186 EGAHFGKTSPQIEALAGEIGRNIGIAFQAYDDILDYTANEA 226
>gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
lyrata]
gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 37/265 (13%)
Query: 3 GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG-- 49
GG +L ++S ++ LD LL M +L SA Y G
Sbjct: 64 GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVVAEVPKLASAAEYFFKRGVQ 123
Query: 50 GKKIRSFLVTECASLFN---------------VNHLTALRVGAAIECIHCYSLIHDDLPS 94
GK+ RS ++ A+ N + L + G A +
Sbjct: 124 GKQFRSTVLLLMATALNLRVPEALIGESTDIVSSELRVRQRGIAEITEMIHVASLLHDDV 183
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D+ RRG ++++ +++AG+ LL+ A +++ K + + + L
Sbjct: 184 LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGE 243
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
++ + D ++ +T KT +L+ +C++ A++ + +G
Sbjct: 244 TMEITSTTEQRYSMDYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYG 297
Query: 215 ENLGIIFQLADDLLDCEE---DLPK 236
+NLG+ FQL DD+LD L K
Sbjct: 298 KNLGLAFQLIDDILDFTGTSASLGK 322
>gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
18818]
gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
18818]
Length = 297
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 27/227 (11%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+RI +D + + + + L GK +RS L+ + V+ +
Sbjct: 1 MERIKAYIDMYIKECGNDEVLNLSSHLSQ--------GKMLRSKLLLAIS---GVSEDSL 49
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L +D RR KP+++ + AI+ G+ L + AF +S
Sbjct: 50 RACALIEMIQSASLL---HDDVIDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELS 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+L ++ S ++ I + ID+ + KT AL+ A
Sbjct: 107 CLDVRLAQSVSSAVVRLSIGEI-------EDVSLASRFHIDKQAYIKMCGNKTAALIVAA 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E GAI+ ++N R +GENLGI FQ+ DD+LD +D L K
Sbjct: 160 AECGAILKGLNKNI---YRIYGENLGIAFQIIDDILDFTQDSKTLGK 203
>gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
z3032]
Length = 338
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 12/234 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
+LQ + T LD+LL Q D + +A+R AL GK++R L+ A
Sbjct: 51 ELQALHDALQTRLDELLP------PGQERDLVCAAMREGALTPGKRVRPLLLILTACDLG 104
Query: 67 VNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + A+E +H SL+ DD+P MDN +RRGKPT+H QY E AI+A LL
Sbjct: 105 CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 164
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-- 182
+ AF +I+ + L D+ ++Q + L+ +GLQG++ GQ D+ + + ++
Sbjct: 165 SRAFGVIA-QASPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 223
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+KT L + AI A AS + + +LR F +LG FQL DDL D + K
Sbjct: 224 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLADGLSNTGK 277
>gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 443
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 88/277 (31%), Gaps = 51/277 (18%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------ 64
+ + + + L + + H +A Y GK +R +V +
Sbjct: 73 DPLRTVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATYLCPK 132
Query: 65 ----------FNVNHL--------TALRVGAAIECIHCYSLIHD---------------- 90
++ I + L +
Sbjct: 133 APPTAPTPTSRGIDTSISPVQILADVNPSAQPISAVETEVLDANSDILPSQRRLAEITEL 192
Query: 91 -------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+D+ RRG P+ ++++ A++AG+ LL A ++ + +
Sbjct: 193 IHTASLLHDDVIDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNPEVVELL 252
Query: 144 S-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + + + + +KT +L+ +C + A++ ++
Sbjct: 253 ATVIANLVEGEFMQLKNTERDERNPKWSEETVSYYLQKTYLKTASLISKSCRAAALLGNS 312
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ +G NLG+ FQL DDLLD + DL K
Sbjct: 313 DPVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGTDLGK 349
>gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f.
lusitanicus]
Length = 471
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 98/279 (35%), Gaps = 50/279 (17%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
++ + +K + L ++ + + + H A Y GK +R LV A
Sbjct: 99 RIIDPAKLVGDDLKEIKANISKLLGSGHPFLNTVARHYFSGEGKHVRPLLVLLIAQATSI 158
Query: 66 --------NVNHLTALRVGAAIECIHCYSLIHD--------------------------- 90
N+++ + + + + D
Sbjct: 159 ADKKSLASNIDYKSIDTPISHGLKNITTNDVFDRKLHYTPSVTDQGCIILPTQRRLAEIS 218
Query: 91 ---------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+D RR P+ + + A++ G+ LL A ++ +
Sbjct: 219 EMIHTASLLHDDVIDASMTRRNLPSANASFGNKMAVLGGDFLLARASLALARLRNAECIE 278
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMA 200
+ + + +L +Q + + + + +M MKTG+L+ +C++ A++
Sbjct: 279 LMATCIANLVEGEFMQLRNTKEGESGKVKKLSTFDHYMEKTYMKTGSLIAQSCKASAVLG 338
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+++ FG+NLG+ FQL DD+LD +L K
Sbjct: 339 GSTKEVANIAYDFGKNLGLAFQLVDDMLDFTVTAAELGK 377
>gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
Length = 357
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 72/242 (29%), Gaps = 23/242 (9%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAI-------RYALLGGKKIRSFLVTECAS--- 63
KR D + L+ + N + A+ Y GGK+ R V
Sbjct: 19 KRFDEVFHQLVTELIDE--DAKNPEISDAMVRFRQVLEYNCPGGKRNRGLSVITSYRFLV 76
Query: 64 ----LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L N A+ VG IE + + L+ DD+ + ++ AI
Sbjct: 77 SSDQLTEENIHRAMVVGWCIEWLQAFFLVLDDIMDQSQTRRGQPCW-YRVEEVGNMAIND 135
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDE 174
+ + + ++ + + T + + F +E
Sbjct: 136 ACYIESCIYRLLRRFCRGQPYYVDLLELFQGTTYKTIVGQSLDLITSPDGKVNLSNFTEE 195
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+++ + MA S+ E + +G FQ+ DD LDC D
Sbjct: 196 RYNAIVKYKTAFYSFHLPVAAAMYMAGITSKESHENAKTILLEMGRFFQIQDDYLDCYGD 255
Query: 234 LP 235
Sbjct: 256 PA 257
>gi|282158091|ref|NP_001164089.1| farnesyl pyrophosphate synthase [Tribolium castaneum]
Length = 425
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 66/243 (27%), Gaps = 15/243 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+E I+ DL + R A+ Y + GKK R V +
Sbjct: 88 REFMAVFPDIVRDLTDAGRQTDIPEVTKRYAKALHYNVPNGKKNRGLAVIAAYKMLEKEE 147
Query: 70 L---TALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+R+ + +D +RRG P + + D LL
Sbjct: 148 NLTPENIRLANIMGWCVELLQGFFLVTDDIIDRSEMRRGMPCWYKKDDTGLNAFNDAILL 207
Query: 125 TYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ + + + L + L + + F
Sbjct: 208 EHGIYTLLKRHFSQHHCYVPTMELFHDVTLKTSMGQALDCLCNKDGKPNLELFTMNKYNS 267
Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
+++ MA+ + + +G+ FQ+ DD LDC D
Sbjct: 268 IVKYKTAYYTFQLPVALAMYMANLYDPEMHRQAKTILMEMGLFFQIQDDFLDCFGDPEVT 327
Query: 235 PKK 237
KK
Sbjct: 328 GKK 330
>gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex]
Length = 393
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + ++ L +Y G GK IR + A N + +
Sbjct: 83 LYEDIREGLSETQPELKLIAQYYFNGEGKAIRPVITMCMARAINFHLDQNTPYVLQKQKK 142
Query: 83 ------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
++ +D RR +P+V+I + + +IIAG+ +L A ++++ +
Sbjct: 143 IAQIAEMIHTASLVHDDVIDVADSRRSRPSVNIVWGQRKSIIAGDFILAMASKMLARLQN 202
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + SQ++ L + M G + + F ++ KT +L+ ++C++
Sbjct: 203 KQVIILLSQVLADLVQG---EFMQLGARENKDERFAHYSEKTF---KKTASLIAYSCQAV 256
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++++ A + +G +G+ FQL DDLLD
Sbjct: 257 SVLSGADSTLQAVAFQYGRQIGMAFQLVDDLLDFIATSA 295
>gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
Length = 299
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 119/227 (52%), Gaps = 14/227 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + R+ LD +L + + A+RYA GGK+IR+ LV + A L ++
Sbjct: 18 QQAARVQDHLDRVLAAF-------GDGAVAQAMRYACSGGKRIRARLVLDGARLHDIPEA 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AL AIE +H YSL+HDDLP MD+ +RRG+PTVHI+++E TA++ G+ L AFE+
Sbjct: 71 RALWPACAIEAMHAYSLVHDDLPCMDDDDLRRGQPTVHIRWNEATAVLTGDALQALAFEL 130
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTG 186
+ P R+ L LSL G QGM+ GQ LDI E D ++ +Q KTG
Sbjct: 131 ATHPDGAATAQARADLALSLARAAGGQGMVLGQALDIAAETADRPLTLDEITHLQAGKTG 190
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
AL+ +A +G MA A FQ+ DD++D D
Sbjct: 191 ALIEWAACAGPRMALADTAPLAAYAAALGL---AFQIQDDVIDVIGD 234
>gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
Prenyl Pyrophosphate Synthase (Surface Polar Residue
Mutant)
Length = 348
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 36/251 (14%)
Query: 16 IDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECAS 63
++ LD LL M +L SA Y G GK+ RS ++ A+
Sbjct: 4 VEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMAT 63
Query: 64 LFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+V + L + G A + +D+ RRG +++
Sbjct: 64 ALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLN 123
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ +++AG+ LL+ A +++ K + + + L ++
Sbjct: 124 VVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTAARYSM 183
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
D ++ +T KT +L+ +C++ A++ + +G NLG+ FQL DD+L
Sbjct: 184 DYYMQKT------YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDIL 237
Query: 229 DCEE---DLPK 236
D L K
Sbjct: 238 DFTGTSASLGK 248
>gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus]
Length = 407
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H A + A+ I ++
Sbjct: 112 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 171
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 172 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLV 231
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 232 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 285
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 286 QYGKNVGIAFQLIDDVLDFTS 306
>gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
Length = 321
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 27/221 (12%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN---------------HLTALRVGAA 78
+L SA Y +G GK+ R ++ A+ NV L + A
Sbjct: 7 PKLASAAEYFFKMGVEGKRXRPTVLLLMATALNVPLPRPALAEVPETLSTELRTRQQCIA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +D+ RRG +++I A++AG+ LL+ A ++S K
Sbjct: 67 EITEMIHVASLLHDDVLDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTE 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
++ + ++ L +Q + + + KT +L+ +C++ A+
Sbjct: 127 VVSLLATVVEHLVTGETMQMTSTSEQRVSMEYY------LQKTYYKTASLISNSCKAIAL 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+A + +G+NLG+ FQL DD LD L K
Sbjct: 181 LAGQTAEVSMLAFEYGKNLGLAFQLIDDXLDFTGTSASLGK 221
>gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 381
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIR 54
+ L+ +D L + ++ A+ + + GK IR
Sbjct: 48 AALLERTRAVVDPHLRSAVESLPGAIRRI-------AMYHFGWQNADGTPASGQAGKAIR 100
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV A + A+R A+E H ++L+HDD+ +D RR +PT +
Sbjct: 101 PALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGVP 158
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AII G+ +L A +++ ++L + Q + + +
Sbjct: 159 DAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADC-AFEERGPDEVTL 217
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ + KTGAL+ AC GA+ A A + FG G+ FQL DDL+ D
Sbjct: 218 DECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDP 277
Query: 234 --LPK 236
K
Sbjct: 278 DRTGK 282
>gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus]
gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus]
Length = 336
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H A + A+ I ++
Sbjct: 41 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 100
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 101 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLV 160
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 161 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 214
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 215 QYGKNVGIAFQLIDDVLDFTS 235
>gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 429
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 19/232 (8%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSA----IRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
+L L+ + + R+ +A + Y + GGK +RS V ALR
Sbjct: 92 VLAHLVGFVGPRRRELDDTRVDAAGDILMSY-VSGGKCLRSTFVYLGWLCGAAPGEAALR 150
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--------------QYDEVTAIIAG 120
A+ E +H ++L+ DD+ R + ++ E AI+ G
Sbjct: 151 AAASFELLHVFALLQDDVMDGSAERRGRPSAHLRFARWHRERGLSGSSRRFGESAAILLG 210
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L ++ +++ R+ G D++ E + +
Sbjct: 211 DLCLIWSEQMLRESGVDSTRLHRAWPRYDTMRTELAVGQFADLTSDVRQMPSLEAVLDVA 270
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + E GA M+ +L +G +G FQL DD+L
Sbjct: 271 RRKSGNYTVRRPLEIGAAMSDCDDRTLTQLGRYGAAVGEAFQLRDDVLGVFG 322
>gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
Length = 327
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 11/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDR---LLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ L+ LL + M + + L SA+ + A GGK +R ASL
Sbjct: 9 NPELNRALLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQ 68
Query: 73 LRV--GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A + +D+ RRG+ ++ ++ + A+ +G+ L T F++
Sbjct: 69 RDRLIKLATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDL 128
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I L + + GQM D + KT AL
Sbjct: 129 I-----TTTTATTPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFS 183
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA A Q + G+N+GI FQ+ DD+LD
Sbjct: 184 LAASEGAYFGGADQRTVALAKRIGQNVGIAFQILDDILDYSS 225
>gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
Length = 288
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 8/190 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTV 107
GGK +R L+ + +F + R+ I + +D+ RRG ++
Sbjct: 5 GGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDIIDDSPERRGAVSI 64
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
++ + TA+ AG+ L T F+++ + + + GQM
Sbjct: 65 QARFGKDTAVYAGDLLFTIFFDLLLEAIPSSAYLRVNAQAMRQILDG-----ELGQMGQR 119
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ K KT AL A + GA A + ++ FG+ LGI FQ+ DD+
Sbjct: 120 FNLQQTLADYLANVKGKTAALFKLAAQEGAHFAGGTADQVASAAAFGQQLGIAFQMLDDI 179
Query: 228 LDCEEDLPKK 237
LD K+
Sbjct: 180 LDYTG--GKE 187
>gi|81997099|sp|Q8V9T7|TPRT_ASFM2 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
gi|16905412|gb|AAL31326.1|L00966_9 polyprenyl synthetase [African swine fever virus]
Length = 318
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ S+ +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSEEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K++ + + + + +D + K
Sbjct: 164 MQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ + + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGTIEDIGVIERAAHCFGNAFQLADDIKDHDTDTG 267
>gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952]
Length = 314
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 23 GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 80
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 81 KVHGPAQAILVGDALFALANEVLLEIGTVEAGRATRRLTTATRKLIDGQ---AQDISYEH 137
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 138 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVDDLL 197
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 198 GIWGDPVATGKQ 209
>gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
subunit 1 [Ciona intestinalis]
Length = 400
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 19/222 (8%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + + L + Y G GK R +V+ + L N + +V I
Sbjct: 95 LHSDIKKILHTNVKPLQTMCSYYFDGNGKHFRPKVVSLVSKLCNEHGGIERKVSENQRKI 154
Query: 83 -----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+ +D +RRGK +V+ + A++ GN ++ A +++SS
Sbjct: 155 SLIAEMIHVGSLIHDDVVDFSNVRRGKRSVNALCGDHNAVMVGNYVVANASKLLSSIGNP 214
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
I SQ++ + +Q D KT +L+ C++ A
Sbjct: 215 EITIIISQIIDDIVRGEFMQQ----------DNKDQFKHYLKKTYKKTASLIANCCKAVA 264
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ + E +G N+G+ FQL DDLLD L K
Sbjct: 265 CLSSNNNEVIEAAYQYGSNIGMAFQLVDDLLDFVASSKTLGK 306
>gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
clavatus NRRL 1]
gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
clavatus NRRL 1]
Length = 451
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 51/261 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + + + +
Sbjct: 89 KFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPRQSRSNFTPSQ 148
Query: 81 CIHC-------------------------------------------------YSLIHDD 91
++ ++
Sbjct: 149 MVNDPISSPSVLADTNPDLSPLVSKSAEAQYDFAGDENILPTQRRLAEITELIHTASLLH 208
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+DN RR + ++Q+ A++AG+ LL A ++ + + + + +
Sbjct: 209 DDVIDNAVTRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 268
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +KT +L+ +C + A++ ++ +
Sbjct: 269 EGEFMQLKNTAADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTPEVVDAA 328
Query: 211 RCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DDLLD
Sbjct: 329 YAYGRNLGLAFQLVDDLLDYT 349
>gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 747
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 79/232 (34%), Gaps = 8/232 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + + I+ + + D L +R+ + GGK R+F + C++ +
Sbjct: 410 LHASVEWIEKNVLGRFCTCKGVLPQHICDTLFLPVRFLIDRGGKCWRTFFLFACSNALSR 469
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ R E H SLI DD+ + V ++
Sbjct: 470 DYADTSRCVIITELGHVGSLIIDDIEDGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVP 529
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------I 180
F +SS + + QG+ + + + + + I
Sbjct: 530 FADVSSLPAEKAKRFYELYFEMMKAAHAGQGLDIRGLGYLMPDVVRTGETKALEDALKAI 589
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGA+ C ++ S+ + FG+ +G+ +Q+ DD+L +
Sbjct: 590 HTCKTGAICGAICSFACVLTDTSEEVTLAMEEFGKAIGLAYQIIDDVLGVKG 641
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 6/161 (3%)
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
IH SLIHDDLP MDN +RRGKPT H + E A++AG+ LL +AFE ++ +
Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAI 198
+ + L +IG +G++ GQ++DI E + Q+ I KTGAL+ + GAI
Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ + E E+LR F +G++FQ+ D+LD ++L K
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGK 161
>gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_33]
gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_33]
Length = 326
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------GGKKIRSFLVTECASLFNVNH 69
I+ +L + Q ++ + + + A+L GK RS L+ CA L +
Sbjct: 2 IEILLKKWIEQIKYYIHLIADYSIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSNWK 61
Query: 70 LTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
++ + L +D+ RRGK ++ +Y + A+ AG+ L+ F
Sbjct: 62 NNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFLMARIF 121
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ +I S+ + + Q + Q ++++ + + KT AL
Sbjct: 122 YYGAVENLNEAVSILSKTVEYMCIGEIEQDLCRYQEDISENKYFEN------IERKTAAL 175
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
A GA + S+ ++L F +NLG++FQL DD+LD +L K+
Sbjct: 176 FQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
Length = 347
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIR 54
+ L+ +D L + ++ A+ + + GK IR
Sbjct: 14 AALLERTRAVVDPHLRSAVESLPGAIRRI-------AMYHFGWQNADGTPASGQAGKAIR 66
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV A + A+R A+E H ++L+HDD+ +D RR +PT +
Sbjct: 67 PALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGVP 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AII G+ +L A +++ ++L + Q + + +
Sbjct: 125 DAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADC-AFEERGPDEVTL 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ + KTGAL+ AC GA+ A A + FG G+ FQL DDL+ D
Sbjct: 184 DECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDP 243
Query: 234 --LPK 236
K
Sbjct: 244 DRTGK 248
>gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC413]
Length = 302
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLT 71
I+ LD LL + D + A+R AL GK+IR L+ A
Sbjct: 20 LAIIEQRLDRLLPVESER------DCVGLAMREGALAPGKRIRPVLLMLAAHDLGYRDEL 73
Query: 72 AL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ A+E +H SLI DD+P MD+ +RRG+PT+H Q+ E AI+A LL+ AF
Sbjct: 74 SGLLDFACAVEMVHAASLILDDIPCMDDAELRRGRPTIHRQFGEPVAILAAVALLSRAFG 133
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+I+ + ++Q + L+H++G+QG++ GQ LD+ + + +
Sbjct: 134 VIA-LADGISSQAKTQAVAELSHSVGIQGLVQGQFLDLTEGGQPRSADAIQLTNHFKTSA 192
Query: 190 CFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F+ A +E+L F +LG FQL DDL D + D K
Sbjct: 193 LFSAAMQMAAIIAGAPLASREKLHRFARDLGQAFQLLDDLTDGQSDTGK 241
>gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus]
gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1; AltName: Full=Solanesyl-diphosphate synthase
subunit 1; AltName: Full=Trans-prenyltransferase 1;
Short=TPT 1
gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus]
gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
Length = 409
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H A + A+ I ++
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 173
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 174 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLV 233
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 234 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 287
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 288 QYGKNVGIAFQLIDDVLDFTS 308
>gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 365
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 65/256 (25%), Gaps = 28/256 (10%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
L+ +D + L + + + A L GGK++R+
Sbjct: 6 DLENLRADVDAAVARHLEALEAQVAALGRPATALTAQAAALLGGGKRLRAAFAYWSFRAH 65
Query: 66 NVNHLTALRVGAA---------------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
R + + S P+ + R
Sbjct: 66 GGADAGPEREAVVRTGAALELFQAAALLHDDVMDASDTRRGQPTAHRAFEARHATAGWAG 125
Query: 111 YDEVTAII--------AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
E ++ + + +R+ + I Q +
Sbjct: 126 EPVRFGESAAILLGDLCLVATQREIAEALAPLPRERAEAVRAAFDTMQSEVIVGQYLDVL 185
Query: 163 QMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ + +I+ T + GA++A A+ + + G LG
Sbjct: 186 VQAEPWGLDPHADEERARAVIRAKTTSYSVRQPLVVGALIAGATPAQVAAVAAVGLPLGE 245
Query: 220 IFQLADDLLDCEEDLP 235
FQL DD+L D
Sbjct: 246 AFQLRDDVLGVFGDPE 261
>gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae CT 5369-93]
Length = 274
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L A A IE IH +L+HDD+ +D +RRGK T + +
Sbjct: 1 MLAVLSAKALGYQGAHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAA 58
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+++ G+ + T +F++++ + + S + + Q M +
Sbjct: 59 SVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTE------A 112
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ KT L A + GAI+ AS + ++ +G+ LG FQL DD++D D
Sbjct: 113 SYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 170
>gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches]
Length = 335
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 22/233 (9%)
Query: 18 TILDDLLLQTASHMQ---TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF------- 65
++ D + + +++ + L + +Y GGKKIR ++ +
Sbjct: 45 ALVKDSISSVSDNIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSRAAEAERAAD 104
Query: 66 ------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ ++ A + A ++ +D RRG +V+ + +I+A
Sbjct: 105 QSTFPKSPEYIAASQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKMSILA 164
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL + ++ ++ + S + L +Q + I
Sbjct: 165 GDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHADKNGAISPFEYY----LR 220
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG+LM +C++ I+ S+ E +G +LG+ FQL DD+LD +
Sbjct: 221 KNYYKTGSLMANSCKASLILGEHSERVCELGFAYGRHLGLAFQLIDDVLDYKG 273
>gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus]
Length = 310
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHL 70
RI+ L+ L+ +L +AIR+A+ GG +IR L A +
Sbjct: 4 MTRIEQALEAALVANEG---AGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPA 60
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A +AIE IHC SL+HDDLP D+ RRG+P+VH Y E A++AG+ L+ AF+
Sbjct: 61 LADAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQT 120
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + + + L G++ GQ + + A
Sbjct: 121 LGAAGGRHPERMAHVLQTVARGVGTPLGIIAGQAWECEPRVALSDYQRAKTGALFAAATA 180
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ AS + E R G+ LG +Q+ADD+ D D L K
Sbjct: 181 AGAQ-------ASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGK 222
>gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
Farnesyltransferase; Heptaprenyl diphosphate synthase
component II [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
Farnesyltransferase; Heptaprenyl diphosphate synthase
component II [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
Length = 326
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 15/237 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +R+ + L+ S ++Q L + + GK +RS L+ CA L
Sbjct: 2 IEILLKEWIERVKYYIH--LIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + L +D+ RRGK ++ +Y + A+ AG+ L
Sbjct: 57 GSNWKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ F + +I S+ + + Q + Q + ++ + +
Sbjct: 117 IARIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQEDISEKKYFEN------IER 170
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KT AL A GA S+ ++L+ F +NLG++FQL DD+LD +L K+
Sbjct: 171 KTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927]
gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei]
Length = 359
Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 34/237 (14%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI- 82
+S + + N+ L A +Y L GGK +R LV A H++ + I +
Sbjct: 40 NHISSLVANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLD 99
Query: 83 ------------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ +D+ +RRGKP +H +D A++AG+ LL
Sbjct: 100 DIPSGTIRPFLRLGEVTELIHTAALVHDDVIDDSEMRRGKPALHCVHDVKRAVLAGDFLL 159
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A I+S + + + LT +Q + + K
Sbjct: 160 ARASLWIASLCVPRIVVLMTTALEDLTRGEMMQMEGCFDL----------ERYEEKTYCK 209
Query: 185 TGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TG+L+ + + A++A S + E +G LGI FQ+ DD LD D L K+
Sbjct: 210 TGSLIANSLAATAVLADPSNSAHEVAAGEYGRRLGIAFQIVDDCLDITGDEKNLGKR 266
>gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537]
Length = 145
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP++ +RRGKPT H Y E I+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPALQVDDLRRGKPTNHKVYGEDITILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ+ D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVADLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950]
Length = 338
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 12/221 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ RI+ ++D L M T+ L A GGK+ R
Sbjct: 15 DAAFAATVRDGVGRIEQLMDTELRSADEIM-TESLTHLFKA------GGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L N A A + MD +RRG PT ++++ AI+AG+
Sbjct: 68 AQL-GPNPDAADVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + + + + Q + + +
Sbjct: 127 YLFATASRLVSRLGPEAVR----LIAETFAQLVTGQMRETRGLTGAAEGADPIEHYLKVV 182
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ A GA+ + A ++ ERL G +G FQ
Sbjct: 183 YEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 223
>gi|303398760|emb|CBW46741.1| B318L [African swine fever virus Georgia 2007/1]
Length = 318
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 82/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ S+ +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSEEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAAEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K++ + + + + +D + K
Sbjct: 164 MQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ S + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGSVEDIGMIERAAHCFGHAFQLADDIKDHDTDTG 267
>gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4]
gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4]
Length = 351
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 83/221 (37%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L + ++E K+++ +L L + +A+ A GGK+ R
Sbjct: 31 DPQLAATVREGLKQVEELLVSELSDGEDFLTE-------AALHLAKAGGKRFRPLFTVLT 83
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L V AA + MD +RRG P+ + ++ AI+AG+
Sbjct: 84 AQL-GPKASDPSVVTAATVVELVHLATLYHDDVMDEASMRRGAPSANARWGNSVAILAGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A ++S+ + I +T + L G+ + +
Sbjct: 143 YLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIGLRGEQDPV-------EHYLKVV 195
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG+L+ + G + A + +RL G+ +G FQ
Sbjct: 196 WEKTGSLIAASGRFGGTFSGADADHVKRLERLGDAVGTAFQ 236
>gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
Length = 295
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+R++ ++ L+ + + RL + L GGK++R+ L+ + A H A
Sbjct: 1 MQRVEREIERLIKE----IDYDEVTRLFNM----LSGGKRLRAKLILKIA----PEHEKA 48
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH SL+HDD+ +D RRG +V+ TA++ G+ L + AF +
Sbjct: 49 PLLAAIVELIHGASLLHDDV--IDESITRRGVASVNATDGSKTAVMLGDILYSKAFTELV 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ +I S + + + + DE + + +KT L+ A
Sbjct: 107 EFDRDIAKSIASSVTALSKGEM-------QDVKMADEFNEDEEKYLDMLYLKTATLIEAA 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A++ + ++ +G+NLG+ FQ+ DD+LD D
Sbjct: 160 AYASALLVG---KDADKYGVYGKNLGLSFQIIDDILDITADSA 199
>gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
Length = 279
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
GGK R+ L+ + A+E IH YSLIHDDLPSMDN RRG PT
Sbjct: 33 AGGKHFRAQLLLSVVQSNKPELINQALDAALALEFIHTYSLIHDDLPSMDNADFRRGIPT 92
Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
+H YDE TAI+ G+ L T AF ++S + + I+ L+ + +
Sbjct: 93 LHKSYDETTAILVGDALNTEAFLVLSHANLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCF 152
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+D+ + ++ + KT L+ A + G + S E ++ G LG+IFQ+ DD
Sbjct: 153 FEDKRLSLNELEFLHTHKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIFQINDD 212
Query: 227 LLD 229
++D
Sbjct: 213 IID 215
>gi|9628182|ref|NP_042768.1| prenyltransferase [African swine fever virus]
gi|82051504|sp|Q65164|TPRT_ASFB7 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
gi|780444|gb|AAA65304.1| prenyltransferase [African swine fever virus]
gi|162849284|emb|CAN10174.1| Prenyltransferase [African swine fever virus Benin 97/1]
gi|162849457|emb|CAN10424.1| Prenyltransferase [African swine fever virus OURT 88/3]
gi|291289519|emb|CBH29176.1| BA71V-B318L [African swine fever virus E75]
gi|1097465|prf||2113434CC prenyltransferase
Length = 318
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ SK +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSKEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K++ + + + + +D + K
Sbjct: 164 MQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ + + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGTIEDIGMIERAAHCFGHAFQLADDIKDHDTDTG 267
>gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT
5716]
Length = 328
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 11/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDR---LLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ L+ LL + M + + L SA+ + A GGK +R ASL
Sbjct: 10 NPELNRALLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQ 69
Query: 73 LRV--GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A + +D+ RRG+ ++ ++ + A+ +G+ L T F++
Sbjct: 70 RDRLIKLATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDL 129
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I L + + GQM D + KT AL
Sbjct: 130 I-----TTTTATTPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFS 184
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA A Q + G+N+GI FQ+ DD+LD
Sbjct: 185 LAASEGAYFGGADQRTVALAKRIGQNVGIAFQILDDILDYSS 226
>gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
Length = 326
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 7/229 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+PS + + ID + + +Q ++ D + I+ A GGK +R S
Sbjct: 1 MPSYWSKYPE-IDQHIKLVCQLIEKRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSF 59
Query: 65 FNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + + +D+ +RRG+ TV Q+ + A+ G+ L
Sbjct: 60 GPKEKQDSEQLTKIAASLEILHMATLIHDDVIDDSPLRRGQVTVQTQFGKDIAVYTGDFL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T FE+I + + L M ++
Sbjct: 120 FTIFFELILETMQDSPYMSINAKAMKKILVGELDQMHL-----YFNQEQSIRDYLRSISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A GA AS + + G ++G+ FQ+ DD+LD
Sbjct: 175 KTAELFRLASLEGAYFGGASPDVVSKAGRIGYHIGMTFQILDDILDYTA 223
>gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 349
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-----------ALLGGKKIR 54
+ L+ +D L + ++ A+ + + GK IR
Sbjct: 16 AALLERTRAVVDPHLRSAVESLPGAIRRI-------AMYHFGWQNADGTPASGQAGKAIR 68
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV A + A+R A+E H ++L+HDD+ +D RR +PT +
Sbjct: 69 PALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGVP 126
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AII G+ +L A +++ ++L + Q + + +
Sbjct: 127 DAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIELCAGQQADC-AFEERGPDEVTL 185
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ + KTGAL+ AC GA+ A A + FG G+ FQL DDL+ D
Sbjct: 186 DECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDP 245
Query: 234 --LPK 236
K
Sbjct: 246 DRTGK 250
>gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
Length = 326
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 15/237 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ L+E +R+ + L+ S ++Q L + + GK +RS L+ CA L
Sbjct: 2 IEILLKEWIERVKYYIH--LIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFL 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + L +D+ RRGK ++ +Y + A+ AG+ L
Sbjct: 57 GSNWKDNKEKICKLAAMVELTHLASLIHDDIVDDSPYRRGKVSIQGKYGKDAAVFAGDFL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ F + +I S+ + + Q + Q + ++ + +
Sbjct: 117 IARIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQKDISEKKYFEN------IER 170
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
KT AL A GA S+ ++L+ F +NLG++FQL DD+LD +L K+
Sbjct: 171 KTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227
>gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
14931]
gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
14931]
Length = 328
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 11/222 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDR---LLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ L+ LL + M + + L SA+ + A GGK +R ASL
Sbjct: 10 NPELNRALLAVSDLMAARIKTKDGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQ 69
Query: 73 LRV--GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A + +D+ RRG+ ++ ++ + A+ +G+ L T F++
Sbjct: 70 RDRLIKLATSIEVLHMATLIHDDIIDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDL 129
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I L + + GQM D + KT AL
Sbjct: 130 I-----TTTTATTPFLTTNAQIMHRILSGELGQMADRFKQDQTFLSYLRNINGKTAALFS 184
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A GA A Q + G+N+GI FQ+ DD+LD
Sbjct: 185 LAASEGAYFGGADQRTVALAKRIGQNVGIAFQILDDILDYSS 226
>gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina]
Length = 288
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
RI+ L L S + RL A+R+A+ GG ++R L A+ + A
Sbjct: 6 RIEQALAAAL---ESVTTSACPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAA 62
Query: 74 RVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+IE +HC SL+HDDLP D+ +RRG P+VH Y E A++AG+ L+ AFE ++
Sbjct: 63 DAAGASIELLHCASLVHDDLPCFDDSPLRRGLPSVHRAYGEPLAVLAGDALIVLAFENLA 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + LM G++ GQ + + + +
Sbjct: 123 RVLGNSPERLAPLLMTVSRAVGMPSGIVAGQAWECEPK-------VSVADYHRAKTGALF 175
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A + + + R G+ +G +Q+ADDL D
Sbjct: 176 AAATAAGAQVAGADADAWRVVGDKIGEAYQVADDLRDV 213
>gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14]
gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14]
Length = 304
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 76/251 (30%), Gaps = 17/251 (6%)
Query: 1 MNGGL----PSKLQENSKRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKI 53
M +L +R D D + + + + L +L GGK++
Sbjct: 1 MTAEFGAGVHERLAGYRERFDARFADYFDTIARQRLPRGSFAPEALELVRDMSLRGGKRL 60
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R L+ E A L + + L A + + D D+ R + +
Sbjct: 61 RVALLYEAARLVTSDAVAGLEEAALSIELLQTHGLIHDDIVDDSPVRRGAASVYYAYRER 120
Query: 114 ---------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
A++AG+ + ++ + + + + G +
Sbjct: 121 FADRPQTALGLAVLAGDLAAFLSVRVLLTAPVPRDLRQAMAAVQATAGADTVVGQILDLE 180
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
D T + + + + G + A A E+ L + +GI Q+
Sbjct: 181 RDFGPLPDRATLDLVSEYKSARYSVLAPLQLGLLAAGADPAAHEKELARYATLVGISGQM 240
Query: 224 ADDLLDCEEDL 234
DD LD D
Sbjct: 241 CDDYLDLFADA 251
>gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 346
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK IR L A + A+ V A+E +H +SL+HDD+ MD RR +PT
Sbjct: 61 PGKAIRPALTLLTARAVGGSAEAAVPVAVAVELVHNFSLLHDDV--MDADLTRRHRPTAW 118
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LL A +++ + D + Q M Q
Sbjct: 119 SVFGISQAILAGDALLAVANRLLAQEPAPVCDRGAEWIGTCCVELCAGQW---SDMDFEQ 175
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ ++V + KTGAL+ AC GA+ + RL FG LG+ FQ DDLL
Sbjct: 176 RADVSVSEVLAMAAGKTGALLGCACALGALAGGGTPAAAGRLDAFGRKLGLAFQYVDDLL 235
Query: 229 DCEEDLP 235
D
Sbjct: 236 GIWGDPA 242
>gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus]
Length = 310
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHL 70
RI+ L+ L+ +L +AIR+A+ GG +IR L A +
Sbjct: 4 MTRIEQALEAALVANEG---AGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPA 60
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A +AIE IHC SL+HDDLP D+ RRG+P+VH Y E A++AG+ L+ AF+
Sbjct: 61 LADAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQT 120
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + + + + L G++ GQ + + A
Sbjct: 121 LGAAGGRHPERMAHVLQTVARGVGTPLGIIAGQAWECEPRVALSDYQRAKTGALFAAATA 180
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ AS + E R G+ LG +Q+ADD+ D D L K
Sbjct: 181 AGAQ-------ASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGK 222
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
N RRGKPT HI Y E A++AG+ LL+++FE I++ + + + + L IG
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60
Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+G++ GQ++D+ E D + I KT AL+ + GAIM S E E+LR F
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
++G++FQ+ DD+LD E+L K
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGK 145
>gi|15806412|ref|NP_295118.1| geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
gi|6459152|gb|AAF10966.1|AE001985_3 geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
Length = 329
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 67/223 (30%), Gaps = 9/223 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFN---VNHLTAL 73
+L +L T R + +R Y GGK IRS L+ A +
Sbjct: 4 ELLARVLSLLPETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSESDTGWES 63
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ A + + D+ RRG+P +H A+ G+ L Y + +
Sbjct: 64 ALWLAAALELFQNWVLVHDDIEDDSEERRGRPALHHLCGMPVALNVGDALHAYMWAAVGK 123
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
Q++ L M+ +
Sbjct: 124 ANVPGAFEEFLQMVYRTAEGQHLDLAWVEGREWGLRPADYLQ---MVGLKTAHYTVIVPL 180
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GA+ A + + G LG FQ+ DD+L+ D K
Sbjct: 181 RLGALAAGMAPQD--AFTPAGLALGTAFQIRDDVLNLAGDPVK 221
>gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 747
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 79/232 (34%), Gaps = 8/232 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
L + + I+ + + D L +R+ + GGK R+F C++ +
Sbjct: 410 LHASVEWIEKNVLGRFCTCKGVLPQHICDTLFLPVRFLIDRGGKYWRTFFFFACSNALSR 469
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ + E H SLI DD+ + V ++
Sbjct: 470 DYADTSKCIIITELGHVGSLIIDDIEDGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVP 529
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------I 180
F ++S + + QG+ + + + + + I
Sbjct: 530 FAGVNSLPAEKAKRFYELYFEMMKAAHAGQGLDIRGLGYLMPDVVRTGETKALEDAVKAI 589
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGA+ C ++ S+ + + FG+ +G+ +Q+ DD+L +
Sbjct: 590 HTCKTGAICGAICSFACVLTDTSEEVTQAMEEFGKAIGLAYQIIDDVLGVKG 641
>gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group]
gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group]
Length = 399
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 24/251 (9%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTE 60
+ +L + I + ++ + S + + + L+A + G GK+ ++
Sbjct: 56 EQMAKELLDPLALIKDEVSEISNRLRSMVVAEVPELTLAAGYFFRAGAEGKRTCPTVLLL 115
Query: 61 CASLFNVNH------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
AS +++ +R+ E IH SLIHDD+ +D+ RRG +++
Sbjct: 116 MASSISMDMADPIVGSKNEIRERYMRLAEITELIHVTSLIHDDV--LDDANTRRGMDSLN 173
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ A++AG+ LL+ AF + + + ++ M +
Sbjct: 174 CVMGKKLAVLAGDFLLSKAFSTAAVSLDNAEVILLLATAVNNLVTGEFMQMRITPIQR-- 231
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
KT AL+ +C++ A++A + +G++LGI +QL DD+L
Sbjct: 232 ---CSMDYYLQKSYYKTAALISNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDIL 288
Query: 229 DCEE---DLPK 236
D L K
Sbjct: 289 DFTGTSASLGK 299
>gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 367
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTASRKLIDGQ---AQDISYEH 190
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 191 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250
Query: 229 DCEEDLP 235
D
Sbjct: 251 GIWGDPE 257
>gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
CCMP1335]
gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
CCMP1335]
Length = 320
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 74/221 (33%), Gaps = 19/221 (8%)
Query: 35 HNDRLLSAIRYALL------GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECI---- 82
+ L SA RY GK++R +V + A++
Sbjct: 5 DHPVLNSAARYFFNSEDGKGKGKQVRPVMVMLFSRAMMQMGTGEGNPSTAHALKSQRRLA 64
Query: 83 ----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ +D RRG+P H + AI+AG+ LL A ++ +
Sbjct: 65 EITEMIHTASLFHDDVIDEADTRRGQPAAHRAFGNKMAILAGDYLLARASICLARLRNVD 124
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
S ++ L LQ + + ++ + M + A
Sbjct: 125 VVECMSTVIEHLVRGEVLQIKDNRTGVPDMEGYLRKNFYKTASLMANSCKSAALLGASAN 184
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ S E +G+++G+ FQL DD LD E L K
Sbjct: 185 GSGISPVVVEAAYLYGKHIGVAFQLIDDALDFEGSAASLGK 225
>gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 402
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 15/234 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRV 75
D++L + + + H ++ +AL GGK++R L+ ALR+
Sbjct: 49 DSVLAECVAEATLHDSEFSDEVAHRVADFALRGGKRMRPLLLWWAMRACSGAESEAALRL 108
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPT--------------VHIQYDEVTAIIAGN 121
G A+E I +LI DD+ + R + A++AG+
Sbjct: 109 GVALELIQTCALIQDDVMDRSHTRRGRPAVHIALAEQRGLAAGSGPGAAFGASAAVLAGD 168
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +A + + + + + + G I +
Sbjct: 169 LALVWADDTVGETFLPPGRRRQVRALWRSMRGEMIAGQYLDLRGQIGGGASAARALRTAH 228
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA +A A + + LR G+ FQL DDLL D
Sbjct: 229 LKSALYSVERPVALGAALAGADEWTTDALRSASRYAGMAFQLRDDLLGVFGDPA 282
>gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta
2897]
Length = 347
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 88/237 (37%), Gaps = 20/237 (8%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ + + ++ L D+ + + L A+ GGK++R LV A
Sbjct: 22 FRDRTAQRMQAVEKRLVDVAADSPDPRVGELTGHL------AVSGGKRMRPLLVLLGAEF 75
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ E +H SL HDD+ MD +R G P+ + ++ E A+ G+ LL
Sbjct: 76 GEEWRDGVVDAAVIAELVHISSLYHDDV--MDGAALRHGVPSANARWGERLAVAGGDWLL 133
Query: 125 TYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A + ++ + N L + + G G+ + + + M
Sbjct: 134 ARAARLAAALGPDMVRFNADVAGDLVEGQLLEMTGPAEGEDPVQHFFRVTSGKTAALLAM 193
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
GA A A + L +G LGI FQ++DDLLD + K+
Sbjct: 194 ALGAGALQ--------AGAPAGQGRSLMEYGHQLGIAFQISDDLLDLVAPAEETGKE 242
>gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
Length = 328
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 77/240 (32%), Gaps = 17/240 (7%)
Query: 1 MNGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
M L LQ N K++ ++D ++ + TQ L +A GGK +R
Sbjct: 1 MASYLNKYPHLQANIKQVQALIDQRVVVANPQI-TQAVQALNAA------GGKFLRPAFF 53
Query: 59 TECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ + A + +D+ +RR + T+ ++ +
Sbjct: 54 FLFTEFGPRVKDHTQKEKLLKVAASLEILHIATLIHDDIIDDSPLRRSQVTIQAKFGKDV 113
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A+ G+ L T FE+I + + L M +
Sbjct: 114 AVYTGDLLFTIFFELILETMQTSDYMAINAQAMKKILMGELDQMQL-----YYKQDQTID 168
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT AL A + GA A + G +G+ FQ+ DD+LD
Sbjct: 169 DYLQAIAGKTAALFALAAQEGAYFGGADNHVVALAETIGHKIGMAFQILDDILDYSASAE 228
>gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 365
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 72 GGKAVRPALALLSAEAAGAAPGAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A EI+ T +L + I Q +
Sbjct: 130 KVHGPAQAILVGDALFALANEILLELGTADAGRATRRLTAATRKLIDGQ---AQDISYEH 186
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 187 RERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 246
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 247 GIWGDPATTGKR 258
>gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 367
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 76 GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTSATRKLIDGQ---AQDISYEH 190
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + L +G +LG+ FQ DDLL
Sbjct: 191 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADVLEAYGYHLGLAFQAVDDLL 250
Query: 229 DCEEDLP 235
D
Sbjct: 251 GIWGDPE 257
>gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 319
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 9 LQENS-KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+++ ++ D L+ ++ + + + S GGK++R L L
Sbjct: 6 LKDSLIRKFDKKLETIIREDLKILSEIKTYTIRS-------GGKRLRPILHYCLCQLLGY 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L VGA +E IH SL+HDD+ +D RRG+ +V ++ TAI+AG+ LL
Sbjct: 59 SGKHWLDVGAIVELIHAASLLHDDV--VDEAETRRGQQSVGSKFGNKTAILAGDYLLACG 116
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ ++ +I +Q++ L+ + +Q D + I KT +
Sbjct: 117 IDHLNDLGYPELMDIFTQVIKDLSISELIQMEWEKNPKITLDIYNK------IAYGKTSS 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L S I++ + EK++LR FG +LG FQ DD +D
Sbjct: 171 LFGAVGVSAGILSDKNDKEKKKLRQFGIDLGSFFQKKDDAIDYF 214
>gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei]
gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei]
Length = 396
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 92/266 (34%), Gaps = 38/266 (14%)
Query: 6 PSKLQENSKRIDT-ILDDLLLQTASHMQTQHNDR-----LLSAIRYALL-GGKKIRSFLV 58
+ +QE+ K++ + I+D L+ Q A+ D L Y GGK +R +
Sbjct: 39 TAFVQEHVKQMQSDIMDQLIPQDATGAVENLADLNVTSNLGRMTHYYFQQGGKMLRPTVS 98
Query: 59 TECASLFNVNHL------------------------TALRVGAAIECIHCYSLIHDDLPS 94
+ N + + ++
Sbjct: 99 LLMGNACNSATNRSISDDLLAVPSSDRSGIATHLTVCQNQYKIGMIAEMIHTASLVHDDV 158
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+D RRG +V+ + +++ G+ +L A +I+ S ++ + ++ L
Sbjct: 159 IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNVISVMASIIEDLVLG- 217
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCF 213
+ M KT +L +C S AI+A + N + +
Sbjct: 218 --EFMQMSATPSEATPQQRMNAYIEKTHRKTASLFASSCRSTAILADPNNLNLHQTAYEY 275
Query: 214 GENLGIIFQLADDLLDC--EEDL-PK 236
G NLGI FQLADDLLD D K
Sbjct: 276 GRNLGIAFQLADDLLDFIATSDEMGK 301
>gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori]
gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori]
Length = 382
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 75/253 (29%), Gaps = 17/253 (6%)
Query: 1 MNGGLPS-KLQENSKRIDTILDDLL----LQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
M + ++ K D +L +++ ++ Q D L + Y L+GGK R
Sbjct: 31 MTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRG 90
Query: 56 FLVTECASLFNVNHL---TALRVGAAIECIHCYS--LIHDDLPSMDNGYIRRGKPTVHIQ 110
L++ + MD +RRG P + +
Sbjct: 91 ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 150
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG------GQM 164
+ + LL ++ + ++ + M G
Sbjct: 151 PEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR 210
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQL 223
F + +I+ G ++A + + + + +G +FQ+
Sbjct: 211 KTDYSSFTLDRYYTIIKYKAAYYTYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQI 270
Query: 224 ADDLLDCEEDLPK 236
DD +DC D K
Sbjct: 271 QDDFIDCFGDEIK 283
>gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1]
gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter
aurescens TC1]
Length = 369
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 78/251 (31%), Gaps = 32/251 (12%)
Query: 15 RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASL---FNVNH 69
I+ L L+ + AS D RL + +LGGK +R L+ E
Sbjct: 17 AIENELSGLIDKRASAATAYGADFARLWALAGQNVLGGKFVRPLLLMETYDALHKHGPAE 76
Query: 70 LTALRVGAAIECIHC--YSLIHDDLPSMDNGYIRRGKPTVHI------------------ 109
+I + +D +RRG P +
Sbjct: 77 PHQRETAISIAAAIELLHYAFLLHDDVIDGDLVRRGHPNLIGSLLAEAGETARTDGADGA 136
Query: 110 ------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ + I+ G+ LL + + + + +R +L T N + G
Sbjct: 137 RAGSGLHWAQTGGILMGDMLLAATHQAFARAELPHELRLRLLDLLEHTINETVAGEQLDV 196
Query: 164 MLDIQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
L D + M+ + A +A A + L G +LG+ FQ
Sbjct: 197 GLGDGIIAPDLQTILMMCGYKTATYTFELPLRAAATLAGADFAVENALATAGRHLGLAFQ 256
Query: 223 LADDLLDCEED 233
L DDLL D
Sbjct: 257 LQDDLLSTFGD 267
>gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
ATCC 35098]
gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
ATCC 35098]
Length = 330
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 101/246 (41%), Gaps = 21/246 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLG-GKKIR 54
MN + L + + +++DL+++ ++ D L I+ AL GK IR
Sbjct: 1 MNLQISDVLSK-----ENLIEDLVIEIHQEIKNILGDYKSSQNLYDIIKDALRSSGKMIR 55
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ L+ C SL ++ + + +D+ +RR + +Y +
Sbjct: 56 TKLLI-CISLMGEEEISDKIISQCAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKD 114
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A+ AG+ ++ F ++ + ++ + + + + Q + ++ DE+ +
Sbjct: 115 VAVFAGDYMIAKVFSYLAKKGYVEEISVIADTIRDMCNGEVGQNLNKYKINVSTDEYFEN 174
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
KT + C G+ + + E++ FG+NLG++FQL DDLLD +
Sbjct: 175 ------ISGKTASFFKTVCYFGSKNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLDLFSEK 228
Query: 234 --LPKK 237
K+
Sbjct: 229 ALTGKE 234
>gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 274
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+V + A+ A+E +H +SL+HDD+ MD RR +PTV + A
Sbjct: 1 MVLLSCEAAGGDPADAVPAAVAVELLHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNA 58
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ +L A I+S+ ++ + + + L + + +
Sbjct: 59 ILAGDAILGLAPRILSATGSEHAL---TAIDWFGKCVVKLCEGQAADISFSERVDVGIDA 115
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTG L+ +C G + A A + + LR FG +G+ FQL DDLL D
Sbjct: 116 CVAMARAKTGELLGTSCALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGDPA 174
>gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 386
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 89/235 (37%), Gaps = 8/235 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLG--GKKIRSFLVTECASL 64
L E+ +D L + M+ ++ A G GK IR LV A+
Sbjct: 53 LSESRASVDPELRSAIATLPESMRRVALYHFGWQHADGTPAAGNAGKAIRPALVLTAAAA 112
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A V AA ++ MD RR +PT + + AI+AG+ L
Sbjct: 113 LGGPGARAAAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDALQ 172
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + ++ ++L + Q M + + + ++ + K
Sbjct: 173 ALALRLFAADPHPASAAAATRLADCVMELCEGQH-ADTAMERRPPDEVTLDETLVMAEAK 231
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
TGAL+ AC GA+ A A+ + E L FG G+ FQL DD++ D K
Sbjct: 232 TGALLGCACAVGALYAGAATEDVEALDAFGREAGMAFQLIDDVIGIWGDPRHTGK 286
>gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 361
Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 9/149 (6%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D RRG+ TVH ++D A++ G+ A ++ ++ + ++
Sbjct: 123 HDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRIITFYAEAVQTI 182
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + Q KT L AC++G + S E L
Sbjct: 183 CEGE------LSPVTVAEPFDKALRQYLYKTGAKTAVLFEAACKAGMVAGGGSDEEIAAL 236
Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
+G +LG+ FQ+ DD+LD D L K
Sbjct: 237 GSYGYDLGMAFQIIDDVLDFIGDERTLGK 265
>gi|229891678|sp|P0C9E1|TPRT_ASFWA RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 83/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ S+ +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSEEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K++ + + + + +D + K
Sbjct: 164 MQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ S + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGSVEDIGMIERAAHCFGNAFQLADDIKDHDTDTG 267
>gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701]
Length = 145
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MDN +R+GKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPGMDNDDLRQGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQVVDDILDVE 145
>gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
DM4]
gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
DM4]
Length = 288
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
+RI+T+LD+ + + L AIRYA+ GG +IR L A + T
Sbjct: 5 RRIETVLDNAISHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPAT 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE +
Sbjct: 62 SEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + L G++ GQ + + + + +
Sbjct: 122 ARGVVRSPTRLAGLVGLIARAAGSPSGIVAGQAWESEPY-------VDLVEYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRDV 213
>gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR L + + A+ A+E +H +SL+HDD+ MD RR +PT
Sbjct: 62 GKAIRPALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDV--MDGDRTRRHRPTAWT 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ A++ G+ LL+ A +++++ + L ++ + Q +
Sbjct: 120 VFGIGNAVLVGDVLLSLACDVLAASEHPSATKAIRLLTDAVQRLVAGQFVDIAFQDRRAV 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + KTGAL+ AC G I + + + R FGE +G+ FQ DDLL
Sbjct: 180 QL---DECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQRAFGEGVGLAFQHVDDLLG 236
Query: 230 CEEDLP 235
D
Sbjct: 237 IWGDPA 242
>gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 359
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 34/237 (14%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI- 82
++ + + N+ L A +Y L GGK +R LV A H++ + I +
Sbjct: 40 NHISNLVANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLD 99
Query: 83 ------------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ +D+ +RRGKP +H +D A++AG+ LL
Sbjct: 100 DIPSGTIRPFLRLGEVTELIHTAALVHDDVIDDSEMRRGKPALHCVHDVKRAVLAGDFLL 159
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A I+S + + + LT +Q + + K
Sbjct: 160 ARASLWIASLCVPRIVVLMTTALEDLTRGEMMQMEGCFDL----------ERYEEKTYCK 209
Query: 185 TGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED---LPKK 237
TG+L+ + + A++A S + E +G LGI FQ+ DD LD D L K+
Sbjct: 210 TGSLIANSLAATAVLADPSNSAHEVAAGEYGRRLGIAFQIVDDCLDITGDEKNLGKR 266
>gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
Length = 378
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 24/243 (9%)
Query: 17 DTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL--- 70
L + L + A+ + Q D + + L GK+IR +
Sbjct: 33 QARLIEFLAVRQEEAARIGPQFADVVAELSTFVLGSGKRIRPAFAWLGWLGAGGDAAGAS 92
Query: 71 --TALRVGAAIECIHCYSLIHDDLPS--------------MDNGYIRRGKPTVHIQYDEV 114
RV AA+E + L HDD+ + + R ++ E
Sbjct: 93 AVPVQRVCAALELLQAGLLAHDDIIDQSDLRRGEPSLHRRFEAEHSRERWAGRSERHGEA 152
Query: 115 TAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
AI+AG +A ++ + D + + + + G + +
Sbjct: 153 LAILAGELAFVWADDLAAEGLDAVTEADRPAFRRAWAAMRSEVIGGQCLDVLAQAGGDES 212
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+E +I+ + E G ++A A + R FGE++G FQL DDLL
Sbjct: 213 EEAAARVIRWKTASYTVARPLELGGVLARADEALLTFYRGFGEDVGAAFQLQDDLLGVFG 272
Query: 233 DLP 235
D
Sbjct: 273 DPA 275
>gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
Length = 379
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 77/258 (29%), Gaps = 27/258 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTAS-----------HMQTQHNDRLLSAIRYALLG- 49
+ + I L Q + H+ + L + + G
Sbjct: 16 DPTFAELFATYAAHIRRALATWAPQHKNAVYTPTCTLPGHITNNLDAFLYEPLAQFVQGK 75
Query: 50 GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSL---IHDDLPSMDNGY 99
GK IR L A + D
Sbjct: 76 GKFIRPALCMLGAHIAAGERAAGEAVQTEVLPDALVRLACALELFQAAALIHDDIADESL 135
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+RRG P ++ + AI G+ L A ++I + + + + +L + +
Sbjct: 136 VRRGNPCLYRTHGTGLAINMGDCALVDASKLICTLSAEGLPSNAALQLLDEFLTMERTTI 195
Query: 160 LGGQ----MLDIQDEFIDETQVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFG 214
G + + + ++ ++KT + GA+ A A + + LR FG
Sbjct: 196 EGQALDLGWSRARTWNLAPSDYLVMAELKTAHYSLASPLVLGALFAQAPKALCDALREFG 255
Query: 215 ENLGIIFQLADDLLDCEE 232
G+ FQL DD L+
Sbjct: 256 CAAGVAFQLRDDYLNLFG 273
>gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
Length = 345
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 5/156 (3%)
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++ MD RRG+ TV + E +AI+ G+ L +++
Sbjct: 96 MHNFSLVHDDVMDRDVTRRGRATVWTVWGETSAIMLGDALHVLCSRVLAEMLAPEVAMTA 155
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ S + + + G + +D + KT LM ACE GA+ A A
Sbjct: 156 IATLESSFLGLRVGQVDDGDFETPKRVTVDG--YLRMAAGKTAGLMGCACELGALTAGAD 213
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+R FG +LG+ FQ+ DD++ D K
Sbjct: 214 PLTVSAMREFGYHLGLAFQILDDIVGIWGDPSVTGK 249
>gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
Length = 328
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 14/231 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+L++N + + ++ + ++ D + S GK +R L+ ++L
Sbjct: 8 EQELKKNLMNVSSTIESTVATAHGFIRPILLDHVQSV-------GKMLRPALILITSAL- 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+T + + +D+ RRGK TV + A++AG+ LL
Sbjct: 60 GEQEVTEDAIRVGSILELIHLASLVHDDIIDSAAKRRGKSTVFAKVGAKQAVLAGDFLLA 119
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A + S + + + S+ + L + Q G ++ KT
Sbjct: 120 KALMLTSGKERGMDSRVVSRALSRLCESELEQDAGQGDFFISHHTYLRR------IAGKT 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+L +C +G + + + G +G+ FQ+ DD+LD K
Sbjct: 174 ASLFALSCYAGVALQESEPTRQMLCHRIGYCMGMAFQIQDDILDYAGSSSK 224
>gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 328
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 20/233 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--- 64
+L +N +++ L D + + D + + A GGK +R L
Sbjct: 11 ELAKNIEKVKHNLQD-------KISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTAD 63
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ + + ++E +H +LIHDD+ +D+ RRG+ +V Q+ + A+ AG+
Sbjct: 64 SQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDIAVYAGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T F++I+ S T L G L + + +
Sbjct: 122 LFTVFFDLITDNVLDTPFFKI----NSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNG 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA AS G+N+GI FQ+ DD+LD D
Sbjct: 178 KTAYLFRLASAE-GAYFGGASSQTVSLATRIGQNIGISFQILDDILDY-SDAS 228
>gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
Length = 326
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 35 GGKAVRPALALLSAEAAGAAAEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 92
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 93 KVHGPALAILVGDALFALANEVLLELGTVEAGRATRRLTTASRKLIDGQ---AQDISYEH 149
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ + GA++ A ++L +G +LG+ FQ DDLL
Sbjct: 150 RERVSVQECLEMEGNKTGALLACSVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLL 209
Query: 229 DCEEDLP 235
D
Sbjct: 210 GIWGDPE 216
>gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25]
Length = 145
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP+MDN +RRGKPT H Y E AI+AG+ LL+YAFE ++ + Q+++
Sbjct: 1 HDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVA-RTPDIPAERLLQVIV 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMCFACESGAIMAHASQN 205
L +G +G++GGQ++D++ E + V I KTGAL+ +GA++A A
Sbjct: 60 RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTTGAVLAGAKPE 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
E + L + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145
>gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A]
Length = 257
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 2/151 (1%)
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
++ MD RRG+PTV + AI+ G+ L A I++ +
Sbjct: 9 HNFTLLHDDVMDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLTDECVAVRAI 68
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + L L + + KT AL C GA++A+A
Sbjct: 69 R--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADD 126
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L FG LG+ FQ DDL+ D
Sbjct: 127 ATIAALERFGHELGLAFQCVDDLIGIWGDPG 157
>gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 289
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-N 68
+ S RI+T + + +L A++YA+ GG +IR L + +
Sbjct: 2 DLSDRIETGMQTAI---RYATANGCPQKLGKALKYAVFPGGARIRPRLCLAVSQACGDKD 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A AIE +HC SL+HDDLP DN RRGKP+VH +Y E A++ G+GL+ AF
Sbjct: 59 PRVANACATAIELLHCASLVHDDLPCFDNAATRRGKPSVHKEYGEEIALLVGDGLIVTAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ + + G++ GQ + + I
Sbjct: 119 ETLARETLHAPEQTARLVATIANAVGSPYGIVAGQAWESE---------EKINITAYHRA 169
Query: 189 MCFACESGAIMAHASQNEKERLRCFGEN--LGIIFQLADDLLDCEEDL 234
+ +GA+ A A + L + LG +Q+ADDL D +D
Sbjct: 170 KTASLFTGAVSAGALSSYGNPLDWYALADALGAAYQVADDLYDAMDDT 217
>gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2]
gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 324
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 84/224 (37%), Gaps = 8/224 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I+ L D S + + + GK +R LV A L+
Sbjct: 3 SISLIRTPIEAELGDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGA 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL +
Sbjct: 63 ICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNAIFNNKVAVLTGDYLLATS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I + + + + + + + KT A
Sbjct: 121 ---LVHAELTNSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFD---VIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L ++ A + E E R GE +GI FQ+ DD+ D
Sbjct: 175 LFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF 218
>gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
Length = 325
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 8/223 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+++ + I ++ + + M+++ L Y + GK++R V A +
Sbjct: 4 VEQIKQPIAHEMELFEQKFSLSMKSKVP-LLNRITHYIVNRKGKQMRPMFVFLVAKMLGD 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
L A ++ +D+ Y RRG +++ + A++ G+ LL+
Sbjct: 63 ERLNDRTYRGASVIELIHTATLVHDDVVDDSYRRRGFFSLNALWKNKIAVLVGDFLLSKG 122
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I S + ++ LQ + ++ + + I + KT
Sbjct: 123 LLLSIDNEDFDLLQIISVAVREMSEGELLQIEKARDLDITEEVYFE------IIRQKTAT 176
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L+ C GA HAS+ + E +R FGE +G+ FQ+ DDL D
Sbjct: 177 LIAACCAMGACAIHASKKDVEAMRKFGELIGLAFQIKDDLFDY 219
>gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 372
Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A + A+E +H +SL+HDDL MD RR + TV
Sbjct: 81 GGKAVRPALALLSAEAAGAAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+ G+ L A E++ T +L + I Q +
Sbjct: 139 KVHGPAQAILVGDALFAVANEVLLESGTVEAGRAARRLTTASRKLIDGQ---AQDISFEH 195
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + + ++ KTGAL+ A GA++ A + + L +G +LG+ FQ DDLL
Sbjct: 196 RERVTVEECLEMEGNKTGALLACAVSIGAVLGGADERTADTLEAYGYHLGLAFQAVDDLL 255
Query: 229 DCEED---LPKK 237
D K+
Sbjct: 256 GIWGDPVATGKQ 267
>gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
Length = 325
Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 23/243 (9%)
Query: 1 MNGGLPSKL---QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56
M L + + + + +DT + + L + Y + GGK++R
Sbjct: 1 MKSSLQRAVTLCKADMQLVDTCIHENLQSDIMMIPAIG--------HYIVNSGGKRLRPL 52
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A LF + + +E IH SL+HDD+ +D+ RRG P+ + + +
Sbjct: 53 LTLLTARLFGYQGKRHVPLSVVVEFIHTASLLHDDV--VDSSDQRRGAPSANGVWGNQAS 110
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L + AF+++ D L L L Q+ + E +
Sbjct: 111 VLVGDYLFSRAFQMMV------SDGDMVMLKLMSDVTNALAEGEVLQLSRTFHLEMTEAE 164
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
+ + KT L A E GA +A S + +G LG+ FQL DD LD D
Sbjct: 165 CLEVIERKTAVLFKAATEVGAHVAGQSAQTIAAMAEYGMCLGVAFQLMDDALDYLAEAED 224
Query: 234 LPK 236
K
Sbjct: 225 AGK 227
>gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 364
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 76/264 (28%), Gaps = 28/264 (10%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSF 56
M G L ++ + + L L S M D L+ +I + GGK++R+
Sbjct: 1 MTGAEQLRNEQADFVAAVAGELTGFLTARQSVMSAISPDIEPLMGSISNLVTGGKRLRAL 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ V A + +D RRG P+VH ++ E+
Sbjct: 61 MCYWGWRGAGGEPAAQQIVAAGAALELFQAAALIHDDIIDRSDTRRGGPSVHRRFTELHG 120
Query: 117 I--IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A + I + L + + + G + L ++ +
Sbjct: 121 SRGWALDSERFGQAAAILTGDLCLSFSEEAFTDIGERAAAGSRARLIFNLMRAEVMAGQY 180
Query: 175 TQVF-------------------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ +I+ G +A AS F
Sbjct: 181 LDILEEVAGPVRDRAGAVSRAQSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAFAL 240
Query: 216 NLGIIFQLADDLLDCEED---LPK 236
LG FQL DD+L D K
Sbjct: 241 PLGEAFQLRDDVLGVFGDPLTTGK 264
>gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 425
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 15/233 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ 71
+L + + + + ++ + L GGK++R L+ T
Sbjct: 52 AVLAERVDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAADTTAALRLG 111
Query: 72 -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + S + P++ G R + A
Sbjct: 112 VALELIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDL 171
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A + + + + M+ GQ LD++ + + V +
Sbjct: 172 ALAWADDTVAETALSAVQRRRIGPLWRTMRTEMVAGQYLDLRGQVRGGSSVEQALRTACL 231
Query: 187 ALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ E + A + + LR G GI FQL DDLL D
Sbjct: 232 KSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPE 284
>gi|157072593|gb|ABV08819.1| farnesyl diphosphate synthetase [Salvia miltiorrhiza]
gi|315019238|gb|ADT70780.1| farnesyl pyrophosphate synthase [Salvia miltiorrhiza]
Length = 349
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 65/226 (28%), Gaps = 11/226 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-----NHLTALRVG 76
+LL A + + Y + GGK R V + L + L
Sbjct: 25 ELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKGGKDLTDDEVFLASA 84
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPK 135
+ MDN + RRG+P AI G L + I+
Sbjct: 85 LGWCVEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAINDGIILRNHIPRILKKHF 144
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMC 190
+ + + G + + I+ E + +
Sbjct: 145 RTKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFY 204
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+MA + ++ N+GI FQ+ DD LDC + K
Sbjct: 205 LPVACALLMAGEDLEKHPTVKDVLINMGIYFQVQDDYLDCFGEPEK 250
>gi|315186189|gb|EFU19951.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
Length = 357
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 17/202 (8%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R LV A + A + L+ MD +RRG P++
Sbjct: 54 GKLVRGALVWAGARVCGGAPEEWCARVGAALELFQSGLLV-HDDVMDRDRVRRGGPSMFA 112
Query: 110 QYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
QY+ E A+ G+ F +++ ++ +
Sbjct: 113 QYEGRADEEGVREARRVGEALAVCVGDVAFFLGFGLLAGVGRGAAMRDALLRCVAEEYAR 172
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCF 213
+ + V + + KT GA++A A + + L
Sbjct: 173 VGVAQMDDVWYGATGGGVSLDDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRGALEEV 232
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
GE LG++FQ+ DD L
Sbjct: 233 GELLGVVFQIRDDELGLFGSEE 254
>gi|111073607|emb|CAL29452.1| geranyltranstransferase [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 243
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 16 IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTA 72
+D ++ LL +T + ++ + A+ Y L K IR L+T + +FN +
Sbjct: 2 LDKLIKSLLIAETDKILSKVSQNKHILAMHYVLFAPTKHIIRPLLITALSQVFNSEAI-- 59
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A++C+H +SLI DDLP +DN + A ++
Sbjct: 60 -SIAVAVKCVHTHSLIQDDLPYIDNSNNNSKNQLSCCYK--KFDEATAVLVAEDAPLTLA 116
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
S + ++ + ++G G + D + ++ + MKT L+
Sbjct: 117 SEILSSPNKDSNKRHEIIKSPSQMRGTKGMVGEQVLDSDKNFGKIKKMHLMKTAKLLAAP 176
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
C+ GAI+ ++ L + NLG+IFQ DD
Sbjct: 177 CKIGAIVGDTPDKQRRALYNYRINLGLIFQAEDD 210
>gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
Length = 235
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 84/226 (37%), Gaps = 4/226 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+++ S M H + Y GK +R+ L A + +
Sbjct: 11 EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA + + + +D RRG H Q+ AI G+ LL Y+ +
Sbjct: 71 YFAAHLEVLHLATLI-HDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKG 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L+ + + + + Q+L+ D + + KT L AC+
Sbjct: 130 LRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQ 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
G+ + S+ + G+ LG+ FQL DDL+D + + K+
Sbjct: 190 LGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGKR 235
>gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
Length = 659
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 17/213 (7%)
Query: 42 AIRYALLGGKKIRSFLVTECASLF---------NVNHLTALRVGAAIECIHCYSLIH--- 89
A+ + GGK R F+ + L + + +
Sbjct: 321 ALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASL 380
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
D R G+P VH ++ TAI G+ L+ + ++S + +++ L
Sbjct: 381 VHDDIEDGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAGTRVDLL 440
Query: 150 LTHNIGLQGMLGGQ-----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + GQ D +D + I +KT A SG MA +
Sbjct: 441 DSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDAS 500
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ +R F NLG+ FQ+ +DL D D K
Sbjct: 501 ALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK 533
>gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
Length = 345
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 67/239 (28%), Gaps = 14/239 (5%)
Query: 10 QENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+E + + DD+L + M + + + Y LGGK R LV ECA
Sbjct: 7 EEFIQLFHELKDDVLQILEQDLDMPQDAIEWIREVMEYNCLGGKLNRGLLVVECAKSLFG 66
Query: 68 NH--LTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
R + MDN +RRG+ + + L
Sbjct: 67 EELSPEIKRKANILGWCIELVQAFFLIADDIMDNSLMRRGQICWYKLPKVELTAVNDAFL 126
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ I + + + L + + + F +++
Sbjct: 127 MESFVFRILRLHFRNEITYTDIIHLFQDTIHRTEMGQLLDLTSQPLNAPSDLSRFTVERY 186
Query: 184 KT-------GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ ++ + + + +G FQ+ DD LDC D
Sbjct: 187 RKIVRYKTAYYTFYLPLACAMLLRGILDEPSHQVAQDICMEIGEYFQIQDDFLDCFGDE 245
>gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
10542]
Length = 369
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 70/254 (27%), Gaps = 28/254 (11%)
Query: 10 QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
++ +++DT L +L + + + + D L A L GGK++R+
Sbjct: 12 EDLREQVDTRLRAVLAEQRTVLAGISGDADPLADAWSQMLRGGKRLRAAFAYWSWRAHGG 71
Query: 66 -------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ + S +P+ + R +
Sbjct: 72 APGGAEAASIVGVGAALELFQAAALFHDDVMDRSDTRRGVPTAHRTFAARHRDAGWSGDA 131
Query: 113 EVTAIIAGN-----GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ + A L+ E + + + + L + M
Sbjct: 132 DQFGLSAAILLGDLSLVASEDEFLRAVRDVPAAAVAPARSLFTQMRTEVTVGQYLDMHAQ 191
Query: 168 Q--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ----NEKERLRCFGENLGIIF 221
+ +++ ++ ES + A + FG LG F
Sbjct: 192 MLPWTDDFDADERRAREVVRSKSARYSVESPIAIGAALAGADAEQLATCSAFGLPLGEAF 251
Query: 222 QLADDLLDCEEDLP 235
QL DDLL D
Sbjct: 252 QLRDDLLGAFGDPE 265
>gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 425
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 15/233 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ 71
+L + + + + ++ + L GGK++R L+ T
Sbjct: 52 AVLAERVDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLG 111
Query: 72 -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + S + P++ G R + A
Sbjct: 112 VALELIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDL 171
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A + + + + M+ GQ LD++ + + V +
Sbjct: 172 ALAWADDTVAETALSAVQRRRIGPLWRAMRTEMVAGQYLDLRGQVRGGSSVEQALRTACL 231
Query: 187 ALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ E + A + + LR G GI FQL DDLL D
Sbjct: 232 KSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPE 284
>gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC416]
Length = 301
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 20/248 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
S L + + L+ LL Q DR+ +A+R L GK+IR L+
Sbjct: 8 TASQESDLLQLHHALQAHLEHLLPA------GQQADRVRAAMRAGTLAPGKRIRPLLLLL 61
Query: 61 CASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + L + A+E +H SLI DD+PSMDN +RRG+P +H +Y E AI+
Sbjct: 62 AARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRGRPAIHCEYGENVAIL 121
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176
A LL+ AFE+I+ L +++ + L+ +GLQG++ GQ D+ D
Sbjct: 122 AAVALLSRAFEVIA-LAPGLPATHKAEAIAELSSAVGLQGLVQGQFQDLHDGAHSRSPEA 180
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------L 228
+ + ++KT L + AI A AS ++RL F ++LG FQL DDL
Sbjct: 181 ITLTNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAFQLLDDLADGSKHTGK 240
Query: 229 DCEEDLPK 236
DC +D K
Sbjct: 241 DCHQDQGK 248
>gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius ATCC 11741]
gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius ATCC 11741]
gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius CECT 5713]
Length = 328
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 20/233 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--- 64
+L ++ +++ L D + + D + + A GGK +R L
Sbjct: 11 ELAKDIEKVKHNLQD-------KISVDYPDLQAALSKMASNGGKFLRPAFFLLFTKLTAD 63
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ + + ++E +H +LIHDD+ +D+ RRG+ +V Q+ + A+ AG+
Sbjct: 64 SQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDIAVYAGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T F++I+ S T L G L + + +
Sbjct: 122 LFTVFFDLITDNVLDTPFFKI----NSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNG 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA AS G+N+GI FQ+ DD+LD D
Sbjct: 178 KTAYLFRLASAE-GAYFGGASSQTVSLATRIGQNIGISFQILDDILDY-SDAS 228
>gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 347
Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-----------GGKKIR 54
+ L+ +D L + ++ A+ + GK IR
Sbjct: 14 AALLERTRAAVDPHLRSAVESLPGGIRRV-------AMYHFGWENADGTPAAGQAGKAIR 66
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV AS + A+R A+E H ++L+HDD+ +D RR +PT +
Sbjct: 67 PALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGIP 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AII G+ +L A +++ ++L + Q + E I
Sbjct: 125 DAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADC-AFEERGPEEITL 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ + KTGAL+ AC GA+ A A + FG G+ FQL DDL+ D
Sbjct: 184 DECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDP 243
Query: 234 --LPK 236
K
Sbjct: 244 DRTGK 248
>gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
multivorum AIU301]
gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
multivorum AIU301]
Length = 289
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ I++ L +L+ + +L +A+R+A+ G ++R L AS +
Sbjct: 2 DAMSLIESTLTTAMLRAET---GGGPPKLAAAMRHAVFPRGARVRPRLCLAVASACGADR 58
Query: 70 LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A A E +HC SL+HDDLP D+ RRG+P+VH + A++AG+ L+ AF
Sbjct: 59 FDAAVAAGAALEFLHCASLVHDDLPCFDDAATRRGRPSVHAAFGAPIAVLAGDALIVLAF 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + + G++ GQ + + + +
Sbjct: 119 QTLALGCAVQPGPVIALSGIVAEAVGMPGGIVAGQAWES-------EDEVDLARYQRAKT 171
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A ++ + R G+NLG +Q+ADDL D D
Sbjct: 172 SALFAAAAMAGAASAGEDPLPWRALGDNLGDAYQIADDLCDAAGDAA 218
>gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
Length = 324
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 84/224 (37%), Gaps = 8/224 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ I+ L D S + + + GK +R LV A L+
Sbjct: 3 SISLIRTPIEAELGDFKELFDSSLSSSNALLDSVVSHIRQRNGKMMRPILVLLVARLYGA 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL +
Sbjct: 63 ICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNAIFNNKVAVLTGDYLLATS 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I + + + + + + + KT A
Sbjct: 121 ---LVHAELTTSHRIIQLVSTLGQDLADGELLQLSNVSNHSFSEEVYFD---VIRKKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L ++ A + E E R GE +GI FQ+ DD+ D
Sbjct: 175 LFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFDYF 218
>gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 425
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 15/233 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ 71
+L + + + + ++ + L GGK++R L+ T
Sbjct: 52 AVLAERMDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLG 111
Query: 72 -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + S + P++ G R + A
Sbjct: 112 VALELIQSCALIHDDVMDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDL 171
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A + + + + M+ GQ LD++ + + V +
Sbjct: 172 ALAWADDTVAETALSAVQRRRIGPLWRAMRTEMVAGQYLDLRGQVSGGSSVEQALRTACL 231
Query: 187 ALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ E + A + + LR G GI FQL DDLL D
Sbjct: 232 KSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGDPE 284
>gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
Length = 234
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+AIECIH YSLIHDDLP+MD+ +RRG+PT HI++DE TAI+ G+ L T AF II+
Sbjct: 7 PASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADG 66
Query: 135 KTQLKDNIR-SQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +L H+ G GM GQ L ++ + ++ I + KTGAL+
Sbjct: 67 PLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDC 126
Query: 192 ACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + GA+ A L + + +G+ FQ+ DD+LD D
Sbjct: 127 AVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 171
>gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
Length = 290
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72
RI+ + + Q ++ +L SA+ Y++ GG +IR + A A
Sbjct: 6 RIEHAISAAITQAQGNV---APTKLASALEYSVTPGGARIRPTICLSVALACGDPQPAMA 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
AIE IHC SL+HDD+P D+ +RRGKP+VH Y E A++AG+ L+ +FE++
Sbjct: 63 DAAATAIELIHCASLVHDDMPCFDDADVRRGKPSVHKAYSEPLALLAGDSLIIASFEVL- 121
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
T++ + + + + GM GG E D+ + + KTGAL A
Sbjct: 122 ---TRVAHHDPLRAIELMKILGQSTGMPGGICAGQGWESEDKIDLSAYHRAKTGALFTAA 178
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA A+ + E G +G FQ+ADDL D D
Sbjct: 179 TRMGAA---AAGEDPEPWTELGARIGEAFQVADDLRDALYDEA 218
>gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 344
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 3/214 (1%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
D L + SH+ H + R GK +R L CA + A+
Sbjct: 30 DALPEEISHIVGYHIGWWDANGRPCEQKGKYVRPTLAVACARAIGGEAAVKSAIPVAVAV 89
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+ MD G +RR +PT + A++AG+ L+ A+ +++S +
Sbjct: 90 ELVHDFSLLHDDVMDEGTVRRHRPTAWSLFGTSKAVLAGDLLVAEAYRLLASSGCDDPER 149
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ L ++ Q M ++ + + KT AL+ ACE GA+ A
Sbjct: 150 LVKILAQAVHDLCVGQAMDLAFEDRVEVTL---AETNAMVSGKTSALIAAACELGALTAG 206
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + FG +LG++FQL DD+L D
Sbjct: 207 ADAEAAAVMCAFGGHLGMLFQLVDDILGVWGDPG 240
>gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
AM1]
gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
AM1]
Length = 288
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
+RI+T+LD+ + + L AIRYA+ GG +IR L A + T
Sbjct: 5 RRIETVLDNAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPAT 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE +
Sbjct: 62 SEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ T+ + + L G++ GQ + + + + +
Sbjct: 122 ARGVTRSPTRLAGLVGLIARAAGSPAGIVAGQAWESEPY-------VDLVEYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRDV 213
>gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar]
gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar]
Length = 359
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 71/245 (28%), Gaps = 19/245 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+Q + + + ++L+ + + T +RL + Y GGK+ R V
Sbjct: 16 VQSDPQLFEAQFEELVTELTEQDLTDSVLTDALNRLREVLHYNTPGGKRNRGLSVIGSLR 75
Query: 64 LFNVNHLTALRVGAAIECIHCYS------LIHDDLPSMDNGYIRRGKPTVHIQYDEV-TA 116
V + + + MD RRG+P + + A
Sbjct: 76 EL-VPPTELTQDAVRRALLVGWCIELLQAFFLVADDIMDASVTRRGQPCWYKRERVGLDA 134
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLGGQMLDIQDEF 171
I L + ++ + + + T L M + F
Sbjct: 135 INDSFLLEGSIYRLLRRHCRAQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLNRF 194
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDC 230
E +++ + MA + E + +G FQ+ DD LDC
Sbjct: 195 TMERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHNNAKHILLEMGEFFQIQDDYLDC 254
Query: 231 EEDLP 235
D
Sbjct: 255 YGDPA 259
>gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens]
Length = 376
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDD 91
L Y + GK R +V A N++H + A+ ++
Sbjct: 81 ELKEISEYYFDVKGKAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 140
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ +I +Q++ L
Sbjct: 141 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 200
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 201 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 254
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 255 QYGKNVGIAFQLIDDVLDFTS 275
>gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
farnesyltransferase / heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius UCC118]
gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
Farnesyltransferase / Heptaprenyl diphosphate synthase
component II [Lactobacillus salivarius UCC118]
Length = 328
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 20/233 (8%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--- 64
+L ++ +++ L D + + D + + A GGK +R L
Sbjct: 11 ELAKDIEKVKHNLQD-------KISVDYPDLQTALSKMASNGGKFLRPAFFLLFTKLTAD 63
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
V+ + + ++E +H +LIHDD+ +D+ RRG+ +V Q+ + A+ AG+
Sbjct: 64 SQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDIAVYAGDY 121
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L T F++I+ S T L G L + + +
Sbjct: 122 LFTVFFDLITDNVLDTPFFKI----NSRTMKKILLGELNQMKHRYNTQQTFLNYLRNVNG 177
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E GA AS G+N+GI FQ+ DD+LD D
Sbjct: 178 KTAYLFRLASAE-GAYFGGASSQTVSLATRIGQNIGISFQILDDILDY-SDAS 228
>gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
Length = 306
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 15/227 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTA 72
RI+ L+ + +L +AIR+A+ GG +IR L A + A
Sbjct: 6 RIEQALEAAVAAQEG---AGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPELA 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+AIE IHC SL+HDDLP D+ RRG+P+VH Y E A++AG+ L+ AF+ +
Sbjct: 63 DAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLG 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + + L G++ GQ + + A
Sbjct: 123 AAGARHPERMARVLQTVARGVGTPLGIIAGQAWECEPRVALSDYQRAKTGALFAAATAAG 182
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ AS + E R G+ LG +Q+ADD+ D D L K
Sbjct: 183 AQ-------ASGGDGETWRALGDWLGEAYQVADDVRDALADPEQLGK 222
>gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 392
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 14/201 (6%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GGK +RS V ALR A+ E +H ++L+ DD+ R
Sbjct: 85 FVSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAA 144
Query: 106 TVHI--------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ ++ E AI+ G+ L +A +++ + + R+
Sbjct: 145 HLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAM 204
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G DI+ + + + ++ + E GA MA RL
Sbjct: 205 RVELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLS 264
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G +G FQL DD+L
Sbjct: 265 RYGAAVGEAFQLRDDVLGVFG 285
>gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
Length = 368
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 71/222 (31%), Gaps = 23/222 (10%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDD 91
L++A R GGK++R+ L+ ++ VGAA+E +L HDD
Sbjct: 43 SDLMTAWRSLTSGGKRVRALLMYHVFRGIESGRSGLSDEDLYGVGAALELFQAAALFHDD 102
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII------------------SS 133
+ + T+ G+ L I +
Sbjct: 103 VMDRSDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASEQLFRSATAP 162
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + + M + + D+ + + +I T +
Sbjct: 163 GQHRSRARDHFDAMRMIVTVGQFMDTHAQVVPLSDDDDAMQRALDVIATKTTHYSVVAPL 222
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
GA +A A E+LR FG+ LG FQL DD L D
Sbjct: 223 LIGAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDLGLYGDPA 264
>gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 290
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
RI+ LD + + L AIRYA+ GG +IR L A + A
Sbjct: 6 RIERALDVAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVARACGDDDPAAS 62
Query: 74 RVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
AA IE +HC SL+HDDLP D+ +RR KP+VH+ + E A++AG+ L+ AFE ++
Sbjct: 63 DAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIALLAGDALIVLAFETLA 122
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ + + + + L G++ GQ + + +
Sbjct: 123 RGAARVPERLGTLVGLVARAVGSPAGIVAGQAWESEPSVGLS-------AYQQAKTGALF 175
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ E R GE LG +Q+ADDL D
Sbjct: 176 AAATVTGAAAAGAEAMPWRLLGEYLGEAYQVADDLRDV 213
>gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
fischeri NRRL 181]
gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
fischeri NRRL 181]
Length = 451
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 78/261 (29%), Gaps = 51/261 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + + + A
Sbjct: 89 KFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRPNDVAPI 148
Query: 81 CIHC-------------------------------------------------YSLIHDD 91
++ ++
Sbjct: 149 SVNDPISSPSILADTNPDTNSLVSQSAEAQYDFAGDENILPSQRRLAEITELIHTASLLH 208
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+DN RR + ++Q+ A++AG+ LL A ++ + + + + +
Sbjct: 209 DDVIDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 268
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +KT +L+ +C + A++ ++ E
Sbjct: 269 EGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTPEVVEAA 328
Query: 211 RCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DDLLD
Sbjct: 329 YSYGRNLGLAFQLVDDLLDYT 349
>gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC404]
Length = 301
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 26/255 (10%)
Query: 1 MNGGLPS------KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKI 53
M + +L E + LD+LL DR+ SA+R L GK+I
Sbjct: 1 MTRPFETHPGHDGELHELHAALQRRLDELLP------VGDERDRVSSAMREGVLAPGKRI 54
Query: 54 RSFLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
R L+ A + + A+E +H SLI DD+P MDN +RRG+PT+H QY
Sbjct: 55 RPLLLILAARDLGCDRDHPGLLDMACAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQY 114
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
E AI+A LL+ AF ++ + + RSQ + L+ +G QG++ GQ D+++
Sbjct: 115 GEDVAILAAVALLSSAFGVMVAAQGL-SPECRSQAVAELSMAVGTQGLVQGQYKDLREGT 173
Query: 172 IDETQVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL-- 227
+ + ++KT L + A+ A AS ++++RCF ++LG FQL DDL
Sbjct: 174 APRSAEEIATTNELKTSVLFGATLQIAALAAGASPAARQKMRCFAQDLGQAFQLLDDLAD 233
Query: 228 ------LDCEEDLPK 236
D +D K
Sbjct: 234 GHAGTGKDINKDAGK 248
>gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
Length = 326
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 19/238 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ L E + I+ L + T GGK +R A
Sbjct: 9 PDVERSLTETCELIEQTLHTRNEDIEEALVTLARS-----------GGKLLRPAFFFLFA 57
Query: 63 SLFNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + ++ + + +D+ +RRG T+ QY + A+ G+
Sbjct: 58 QLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGD 117
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +I+ + + ++ L GQM D +
Sbjct: 118 LLFTEFFTLIADAMNGSEF-----MKINAQGMKRLLLGELGQMSHRFDRRMSIPAYLRSV 172
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
KT L +C GA H+S+ + + G ++GI FQ+ ++LD D KK
Sbjct: 173 NGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYANILDYTADTETLKK 230
>gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 141
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H Y E A++AG+ LL +AFE +++ + N+ + L+ IG +G++
Sbjct: 2 RRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEGLV 61
Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ++DI E I E + I KT AL+ + GAI+ A+++E ERLR F +
Sbjct: 62 AGQVVDICSEGISEVGLELLEFIHLHKTAALLEGSVVLGAILGGATESEVERLRKFARCI 121
Query: 218 GIIFQLADDLLDCE 231
G++FQ+ DD+LD
Sbjct: 122 GLLFQVVDDILDVT 135
>gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin]
gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain
Friedlin]
Length = 359
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 91/247 (36%), Gaps = 34/247 (13%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF------- 65
++ + + S + +N+ L A +Y L GGK +R LV A
Sbjct: 29 ALVNREVTAIKEHIQSLVTNTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSA 88
Query: 66 -----------NVNHLTALRVGAAIECIH-CYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
V T L E ++ +DN RRG+P +H YD
Sbjct: 89 HLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLLHDDVIDNTDTRRGRPALHKVYDA 148
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A++AG+ +L A I+ Q+ + L L D D
Sbjct: 149 KRAVLAGDYMLARASFYIA----------TLQVPRIVILMTTALEELTSGELMQMDGCFD 198
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +L+ + S A++A ++ ++ FG++LGI FQ+ DD LD
Sbjct: 199 IPRYEQKSFCKTASLIANSLASTAVLAGPGNEALEQTAFDFGKHLGIAFQILDDCLDITG 258
Query: 233 D---LPK 236
D L K
Sbjct: 259 DEKMLGK 265
>gi|229891677|sp|P0C9E0|TPRT_ASFP4 RecName: Full=Trans-prenyltransferase; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Polyprenyl-diphosphate synthase
Length = 318
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 18/231 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--- 66
+ S+ +TIL++ + +L YAL GGK IR ++ E
Sbjct: 50 KTFSEEFETILNNAIED------GDFKGQLTEPCSYALRGGKYIRPIILMEIVRACQLQH 103
Query: 67 --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ A+E H SLI DD+PS DN RR K TV ++ A ++ L
Sbjct: 104 SFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSALALT 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F+ I +K++ + + + + +D + K
Sbjct: 164 MQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAGSGQLVDTPE-------K 216
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
T A G ++ + + + G FQLADD+ D + D
Sbjct: 217 TIPFFKIAFIMGWVLGTGTIEDIGMIERAAHCFGNAFQLADDIKDHDTDTG 267
>gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 311
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 11/201 (5%)
Query: 37 DRLLSAIRYAL---LGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIH-CYSLIHDD 91
L +A Y GK++R L+ ++L N R E +
Sbjct: 10 PALATAAEYFFKVGAEGKRMRPTVLLLMASALTNEPGDVRRRQQRLAEITELIHVASLLH 69
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRG ++++ AI+AG+ LL A ++S + + S+++ L
Sbjct: 70 DDVLDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRNTEVIALLSRVLEHLV 129
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+Q L D + +T KT +L+ + ++ ++ E
Sbjct: 130 TGEVMQMTAKADRLTSFDHYFQKT------YFKTASLIANSAKAIVLLGGHDVTTAESAY 183
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G +LG+ FQ DD+LD
Sbjct: 184 QYGRHLGLAFQFQDDVLDFTG 204
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 12/240 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
+ L N++ + LD L + L ++RY+ L GGK++R L
Sbjct: 67 TFDIERYLSANARTVHDALDLALQGL------GCPEVLRESMRYSVLAGGKRLRPALAIA 120
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L A+ V A+E +H SLIHDD+P MD+ +RRG+P+ H+ + E TA+++G
Sbjct: 121 ACELVGGPAAAAVPVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSG 180
Query: 121 NGLLTYAFEIISSP-----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ LL AFE ++ + + S G+ M
Sbjct: 181 DALLALAFEHVARASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLA 240
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ I KT L+ A SGA++ E ER+R + LG++ Q+ DD+LD
Sbjct: 241 ALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTATSE 300
>gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola]
Length = 348
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR+ L A + A+ A+E +H +SL+HDD+ MD RRG+PTV
Sbjct: 65 GKMIRAALTVLAAEACGGDVQRAVCGAVAVELVHNFSLLHDDV--MDGDLERRGRPTVWA 122
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
AI+AG+ LL I+ T G + +
Sbjct: 123 TLGVPAAILAGDVLLARGCAILEGDSEHRTWATELLTETIATLAEGQMADVAFEHRTTIS 182
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KT AL+ ACE GA ++ +ERL FG +LG+ FQL DD+L
Sbjct: 183 L----EEALAVSEAKTAALLSCACELGAGLSGGGAEARERLAKFGWHLGMAFQLVDDVLG 238
Query: 230 CEEDLP 235
D
Sbjct: 239 IWGDPA 244
>gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421]
gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421]
Length = 349
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 14/223 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L+ + +++ ++ L ++ N+ L+ + GGK IR A L
Sbjct: 36 LKPSLQKVLNCIERQLCFADPNV----NESLIEFLH---AGGKLIRPVFFLLFAHLGEET 88
Query: 69 HLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + + +DN +RRG ++ + + A+ AG+ LLT
Sbjct: 89 FDSDPAIIETAAALELLHMATLVHDDIIDNSPLRRGIASIQNIHGKSIAVYAGDYLLTVF 148
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
F +I+ + + ++S + L Q + I + F I + KT
Sbjct: 149 FTLIAKNISDKELLVQSAASMQRLLEGELH-----QYRMKFNPEITVSDYFQIIEGKTAE 203
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L +C G A ++ +E+ + G+N+G FQ+ DD+LD
Sbjct: 204 LFYLSCYLGISFA-KNKTYQEQAKRIGKNIGCAFQIIDDILDY 245
>gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
Length = 296
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 18/216 (8%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
LD + ++ ++ + R+L R ++ GK +RS L+ A + H +A+
Sbjct: 2 LDQVKMRMEQIVEDLQDKRVLEIYR-SIPMGKMLRSKLILNIAPVPEAIHTSAIIE---- 56
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D+ RRG P+V+ AI+ G+ L AF +SS L
Sbjct: 57 ---LIHMASLLHDDVIDDADTRRGNPSVNAVLGNKPAIMIGDILYAKAFYELSSLPKTLA 113
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + L + + D + KT +L+ + S A +
Sbjct: 114 QTISQAVALLSLGE-------LKDVELSKSFQPDIEAYMDMIYKKTASLIEASAISAAYL 166
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + +G+ LG+ FQ+ DD+LD D
Sbjct: 167 SG---KDLKSYGEYGKKLGLAFQIVDDILDIISDEE 199
>gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM
5305]
gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM
5305]
Length = 623
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 76/250 (30%), Gaps = 21/250 (8%)
Query: 9 LQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTECAS 63
++E + D D LL + N + + R + GGK+ R F+
Sbjct: 252 MREGKRLFDPEEYDRLLPPMRVGDKKFANSPVAATERISRDWLANGGKRFRPFITLAAWD 311
Query: 64 L-FNVNHLTALRVGAAIECI------------HCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
+ + + D+ R G+ T+H Q
Sbjct: 312 ARNGGDATRKDPSSNEPLEVPDAVKKAAIAIEAFHKASLVHDDIQDDDEYRYGEETLHRQ 371
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDI 167
+ AI G+ L+ + +++ S ++ ++ G +
Sbjct: 372 HGVGIAINVGDYLIGMGYRLLAECHVADDPMAVSDIVQRMSLAHIKLCEGQGAEMEWTAN 431
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ I +KT A SG + E + F +LG+ FQ+ +DL
Sbjct: 432 PSLNLTPLDAMQIYALKTSPAFEAALYSGLRLGGDVSEYDEMVSTFCRHLGVGFQILNDL 491
Query: 228 LDCEEDLPKK 237
D D K
Sbjct: 492 KDWRGDSQNK 501
>gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 347
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 24/245 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-----------GGKKIR 54
+ L+ +D L + ++ A+ + GK IR
Sbjct: 14 AALLERTRAAVDPHLRTAVESLPGGIRRV-------AMYHFGWENADGTPAAGQAGKAIR 66
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV AS + A+R A+E H ++L+HDD+ +D RR +PT +
Sbjct: 67 PALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGIP 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
AII G+ +L A +++ ++L + Q + E +
Sbjct: 125 DAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIELCAGQQADC-AFEERGPEEVTL 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
+ + KTGAL+ AC GA+ A A + FG G+ FQL DDL+ D
Sbjct: 184 DECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLIDDLIGIWGDP 243
Query: 234 --LPK 236
K
Sbjct: 244 DRTGK 248
>gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 262
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D +RRG+ T + + +++ G+ L + +FE++ + I
Sbjct: 15 FLHTATLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMEVMKI 74
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S+ + LQ I+D E + + KT L + S A + +A
Sbjct: 75 LSKATRIIAEGEVLQL------SKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNA 128
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q + E LR FG++LG+ FQL DDLLD D
Sbjct: 129 PQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 161
>gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
ulcerans Agy99]
gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
ulcerans Agy99]
Length = 340
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 60/211 (28%), Gaps = 19/211 (9%)
Query: 44 RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ L GGK++R L + +A+E +H ++LIHDD+ +
Sbjct: 24 EFVLSGGKRLRPIFAYRGWPAVTTEDPDPDLLLLFSALELLHAWALIHDDVIDASSTRRG 83
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
R +H G I +S +
Sbjct: 84 RPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIISRVSQSSLSPDAQRRV 143
Query: 162 GQMLDIQDEFIDETQVFMIQ-----------------KMKTGALMCFACESGAIMAHASQ 204
++ + Q I + + GA A
Sbjct: 144 QRVWSDIRTEVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAAAAADRP 203
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +E FG +LG+ FQL DD+L D
Sbjct: 204 DVQEAFHQFGTDLGVAFQLRDDVLGVFGDPA 234
>gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 332
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 12/221 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ G + +++ RI+ ++D L M L A GGK+ R
Sbjct: 9 DPGFAATVRDGVGRIEQLMDTELCSADEVMTDSL-THLFKA------GGKRFRPLFTVLS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + N A + MD +RRG PT ++++ AI+AG+
Sbjct: 62 AQI-GPNPDAHEVTIAGAVIELVHLATLYHDDVMDEAEVRRGAPTANVRWGNNVAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + + + + Q + + +
Sbjct: 121 YLFATASRLVSLLGPEAVR----LIAETFAQLVTGQMRETRGLTGAAEGADPVEHYLKVV 176
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ A GA+ + A + ERL G +G FQ
Sbjct: 177 YEKTACLIAAAGRFGAMFSGADAEQVERLSRLGGIVGTAFQ 217
>gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 31 MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLT-------------ALR 74
M T L A Y LG GK+ R ++ ++ + R
Sbjct: 1 MVTAEVPVLAMAAEYFFKLGVEGKRFRPMVLLLMSTSLMTSPSHGLQDLIFDDLRLRQQR 60
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ E IH SL+HDD+ +D+ RRG +++ A++AG+ LL A ++S
Sbjct: 61 IAEITEMIHVASLLHDDV--LDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALASL 118
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + SQ++ L +Q + + + D ++ +T KT +LM +C+
Sbjct: 119 RNTEVVELLSQVLEHLVTGEIMQLSVEDKDMSNMDYYMQKT------FYKTASLMANSCK 172
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ A++A ++ +G +LG+ +QL DD LD
Sbjct: 173 AIAVLAGQPEDVALLAFNYGRHLGLAYQLVDDALDYTG 210
>gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
14672]
gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
14672]
Length = 453
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 73/252 (28%), Gaps = 25/252 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN---DRLLS-AIRYALLGGKKIRSFLVTECASLF 65
++ S + +LD +L + + D L R+ GGK++R V
Sbjct: 53 RDVSAAVGRVLDHVLADRVARARAVDPLFGDDLAERVARFTRTGGKRVRPRFVWWTLRAC 112
Query: 66 NVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ + + S + P++ +
Sbjct: 113 GGGDGPSVAAALRIGAALELLQTCALVHDDVMDGSTLRRARPALHVDVAAQYGGAAPSAR 172
Query: 112 DE----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
E AI+AG+ L +A ++++ + + + + + G
Sbjct: 173 AERLGGAAAILAGDLALAWADDLLAETPLAPRSARAVRRLWADMRTEMVAGQYLDVHGQA 232
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA +A A +E L G G+ FQL DDL
Sbjct: 233 TGSRSLPRALHAACLKSALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDL 292
Query: 228 LDCEED---LPK 236
D D K
Sbjct: 293 DDVFGDPRHTGK 304
>gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus]
Length = 407
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + + A + ++
Sbjct: 112 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 171
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 172 DDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIEDLV 231
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 232 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 285
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 286 QYGKNVGIAFQLIDDVLDFTS 306
>gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
ghanaensis ATCC 14672]
Length = 463
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 73/252 (28%), Gaps = 25/252 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN---DRLLS-AIRYALLGGKKIRSFLVTECASLF 65
++ S + +LD +L + + D L R+ GGK++R V
Sbjct: 63 RDVSAAVGRVLDHVLADRVARARAVDPLFGDDLAERVARFTRTGGKRVRPRFVWWTLRAC 122
Query: 66 NVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ + + S + P++ +
Sbjct: 123 GGGDGPSVAAALRIGAALELLQTCALVHDDVMDGSTLRRARPALHVDVAAQYGGAAPSAR 182
Query: 112 DE----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
E AI+AG+ L +A ++++ + + + + + G
Sbjct: 183 AERLGGAAAILAGDLALAWADDLLAETPLAPRSARAVRRLWADMRTEMVAGQYLDVHGQA 242
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + GA +A A +E L G G+ FQL DDL
Sbjct: 243 TGSRSLPRALHAACLKSALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDL 302
Query: 228 LDCEED---LPK 236
D D K
Sbjct: 303 DDVFGDPRHTGK 314
>gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 335
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ RI+ ++D L M T+ L A GGK+ R
Sbjct: 15 DPAFAATVRDGVGRIEQLMDTELRSADDIM-TESLTHLFKA------GGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A A + MD +RRG PT ++++ AI+AG+
Sbjct: 68 AQI-GPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + L L + + +
Sbjct: 127 YLFATASRLVSRLGPEAV-------RLIAETFAQLVTGQMRETRGRKQGSDPIEHYLKVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ A GA+ + A ++ ERL G +G FQ
Sbjct: 180 YEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 220
>gi|213407468|ref|XP_002174505.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
yFS275]
gi|212002552|gb|EEB08212.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
yFS275]
Length = 354
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 69/246 (28%), Gaps = 19/246 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHM-----QTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
++ + + + L+ + ++ D ++ + LGGK R V + +
Sbjct: 11 EDKRAKFEAVFPILVDEIVDYLTSVNVPQDAKDWFKKSLYHNTLGGKYNRGLSVIDTYEI 70
Query: 65 FNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + + R CI M + R V +I +
Sbjct: 71 LSGKALDDNSYFRAALLGWCIELLQAFFLVADDMMDESKTRRGQPCWYLMPNVGSIAIND 130
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDE 174
+ + K + L+ + + +F +
Sbjct: 131 SFMLESAIYFLLKKHFRHETYYVDLLDLFHEVTFQTTLGQELDLLTAPENHVDLSKFSQD 190
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
F++ MA+ A+ + +R LG FQ+ DD LDC D
Sbjct: 191 KHAFIVIFKTAYYSFYLPVALAMCMANVATPDNLQRASDVLIPLGKYFQIQDDYLDCYGD 250
Query: 234 ---LPK 236
K
Sbjct: 251 PSVTGK 256
>gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
Length = 369
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 14/201 (6%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GGK +RS V ALR A+ E +H ++L+ DD+ R
Sbjct: 62 FVSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAA 121
Query: 106 TVHI--------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ ++ E AI+ G+ L +A +++ + + R+
Sbjct: 122 HLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDAM 181
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G DI+ + + + ++ + E GA MA RL
Sbjct: 182 RVELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLS 241
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G +G FQL DD+L
Sbjct: 242 RYGAAVGEAFQLRDDVLGVFG 262
>gi|225870049|ref|YP_002745996.1| geranyltranstransferase [Streptococcus equi subsp. equi 4047]
gi|225699453|emb|CAW92957.1| putative geranyltranstransferase [Streptococcus equi subsp. equi
4047]
Length = 289
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
+ RI+ + + Q+ + L AI Y++ GG K L+
Sbjct: 2 DKLTRINATIHQYYDR-----QSTVSADLEEAILYSVDGGGKRLRPLMLLELLEGFGLAL 56
Query: 70 -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
V AA+E IH SLIHDDLP+MDN RRG+ T H Q++E TAI+AG+ L F
Sbjct: 57 TDAHYAVAAAVEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFNEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ ++ SL + + + +D ++ I KTG L
Sbjct: 117 ALIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEHQLLDIQELSDIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ + I+A S + L G +G FQ+ DD+LD DL K
Sbjct: 177 LTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDLTASFADLGK 227
>gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus]
gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus]
Length = 425
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 15/233 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ 71
+L D + + + + + L GGK++R L+
Sbjct: 51 AVLADRIDEAVRSDASFCEELARRVADFTLEGGKRMRPRLLWWGMRSCGAAETAAALRLG 110
Query: 72 -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + S + P+M G R + + A
Sbjct: 111 VALELIQSCALIHDDVMDRSRLRRGKPAMHIGLAERAGLSPDSERGSDFGASAAVLAGDL 170
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A + + + + M+ GQ LD++ + + V +
Sbjct: 171 ALVWADDTVAETVLSAAQRRRIGALWRAMRTEMVAGQYLDLRGQLSGGSSVAQALRTACL 230
Query: 187 ALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ E + A + LR G GI FQL DDLL D
Sbjct: 231 KSASYSVERPLAIGAALAGADDRTTDALRSAGRCAGIAFQLRDDLLGVFGDPA 283
>gi|307719391|ref|YP_003874923.1| polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
gi|306533116|gb|ADN02650.1| putative polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
Length = 376
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 17/202 (8%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R LV A + A + L+ MD +RRG P++
Sbjct: 73 GKLVRGALVWAGAGVCGGAPEEWCARVGAALELFQSGLLV-HDDVMDRDRVRRGGPSMFA 131
Query: 110 QYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
QY+ E A+ G+ F +++ ++ +
Sbjct: 132 QYEGRAGEEGVREARRVGEALAVCVGDVAFFLGFGLLAGVGRGEAMRDALLRCVAEEYAR 191
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCF 213
+ E + V + + KT GA++A A + + L
Sbjct: 192 VGVAQMDDVWYGAAGEGVRLEDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRGALEEV 251
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
GE LG++FQ+ DD L
Sbjct: 252 GELLGVVFQIRDDELGLFGSEE 273
>gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514]
gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514]
Length = 189
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q+ I + KT AL+C + G + A+ + + + L FG N+G+ FQ+ DD+LD +
Sbjct: 67 QLKYIHERKTSALLCCSVRLGGMSANCTPAQLKALTDFGYNVGLAFQIIDDILDVTQTSE 126
>gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+]
gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+]
Length = 454
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 90/277 (32%), Gaps = 51/277 (18%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + + + L + + H +A Y GK +R +V + ++
Sbjct: 84 DPLRIVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATSLCPK 143
Query: 71 TALRVGAAIECIH----------------------------------------------- 83
R A ++
Sbjct: 144 APQRQQATLQASMGIDSSISPLSVLSDFNPSATAVAPEAETNDHPDILPSQRRLAEITEL 203
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++ +D+ RRG P+ ++++ A++AG+ LL A ++ + +
Sbjct: 204 IHTASLLHDDVIDHSESRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELL 263
Query: 144 S-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + + Q T +KT +L+ +C + A++ +
Sbjct: 264 ATVIANLVEGEFMQLKNTARDERNPQWSEETLTYYLQKTYLKTASLISKSCRAAALLGGS 323
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ +G+NLG+ FQL DD+LD ++L K
Sbjct: 324 DAATVDAAYAYGKNLGLAFQLVDDMLDYTRSEQELGK 360
>gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase
[Rhodococcus erythropolis SK121]
gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase
[Rhodococcus erythropolis SK121]
Length = 359
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 8/203 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L D+ S + + +A+ A GGK+ R A L V + ++ A +
Sbjct: 50 LSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATV 109
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + ++ MD +RRG P+ + ++ AI+AG+ L +A ++S+ +
Sbjct: 110 TELVHLATLY-HDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPE-A 167
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I ++ L + + + D + KTG+L+ + G
Sbjct: 168 VRIIAETFAELVTGQMRETIGVKKEQDP------VEHYLKVVWEKTGSLIAASGRFGGTF 221
Query: 200 AHASQNEKERLRCFGENLGIIFQ 222
+ A ERL G+ +G FQ
Sbjct: 222 SGADAAHIERLERLGDAVGTAFQ 244
>gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4]
gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis
PR4]
Length = 349
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 8/203 (3%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L D+ S + + +A+ A GGK+ R A L V + ++ A +
Sbjct: 40 LSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATV 99
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + ++ MD +RRG P+ + ++ AI+AG+ L +A ++S+ +
Sbjct: 100 TELVHLATLY-HDDVMDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPE-A 157
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I ++ L + + + D + KTG+L+ + G
Sbjct: 158 VRIIAETFAELVTGQMRETIGVKKEQDP------VEHYLKVVWEKTGSLIAASGRFGGTF 211
Query: 200 AHASQNEKERLRCFGENLGIIFQ 222
+ A ERL G+ +G FQ
Sbjct: 212 SGADAAHIERLERLGDAVGTAFQ 234
>gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
Length = 362
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 82/249 (32%), Gaps = 17/249 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-----LSAIRYALLGGKKIRSF 56
+P + + ++R +T + + A + R +L GGK++R
Sbjct: 8 TPQIPERFADCARRFNTRFEQYFRELADSFDAPPSSRFTPECLDLLRDLSLRGGKRLRVA 67
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
++ E A L + + L A + +D+G +RRG P+ + Y E
Sbjct: 68 MLYEAARLVTPDPVPGLEEAALGVELLQTH-GLVHDDIIDDGPVRRGGPSTYYAYREQFP 126
Query: 117 II------AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
A + ++ + + M+ GQ+ DI+ +
Sbjct: 127 DRPQDALGLAVLAGDLALVLSLRVLLDSPAPPSARHAMVGVLSAAASAMIAGQITDIERD 186
Query: 171 FIDETQVFMIQKM----KTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLAD 225
F ++ + + + G + A + LR + +GI + D
Sbjct: 187 FTHLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLVGIYETMRD 246
Query: 226 DLLDCEEDL 234
D LD D
Sbjct: 247 DYLDLFGDA 255
>gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus]
Length = 422
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + + A + ++
Sbjct: 127 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 186
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 187 DDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIEDLV 246
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 247 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 300
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 301 QYGKNVGIAFQLIDDVLDFTS 321
>gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
ATCC 11577]
gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
ATCC 11577]
Length = 325
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 11/220 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L+ LL+ + + R+L+ ++ GGK +R + F N A
Sbjct: 19 LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSE-FGENIPADKLRAGAA 74
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D +RRG T+H QY + AI AG+ L T F+ +
Sbjct: 75 AIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLK-----S 129
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + L + + QM + + + F KT L + E AI+
Sbjct: 130 THDATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAIL 189
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
HA ++ G +G +Q+ DD+LD D KK
Sbjct: 190 THAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKK 229
>gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 382
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 14/201 (6%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ GGK +RS V ALR A+ E +H ++L+ DD+ R
Sbjct: 75 FVSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDVMDGAQERRGRPAA 134
Query: 106 TVHI--------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ ++ E AI+ G+ L +A +++ + + R+
Sbjct: 135 HLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAWPRYDAM 194
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G DI+ + + + ++ + E GA MA RL
Sbjct: 195 RVELAVGQFADLTNDIRQSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLS 254
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G +G FQL DD+L
Sbjct: 255 RYGAAVGEAFQLRDDVLGVFG 275
>gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
ATCC 8290]
gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
ATCC 8290]
Length = 325
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 11/220 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L+ LL+ + + R+L+ ++ GGK +R + F N A
Sbjct: 19 LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSE-FGENIPADKLRAGAA 74
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D +RRG T+H QY + AI AG+ L T F+ +
Sbjct: 75 AIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLK-----S 129
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + L + + QM + + + F KT L + E AI+
Sbjct: 130 THDATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAIL 189
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
HA ++ G +G +Q+ DD+LD D KK
Sbjct: 190 THAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKK 229
>gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella
elegans ATCC 700633]
gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella
elegans ATCC 700633]
Length = 325
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 17/224 (7%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTECASLFN 66
L++ I ++ D + + + L GGK IR L N
Sbjct: 13 FLKQELSAIRHLMLDSVEMEDEDIHQAIVEMLQQ-------GGKMIRPAYLTLFANWSNN 65
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
N V AA+E +H +L+HDD+ +D +RRG+ T++ +Y AI AG+ +LT
Sbjct: 66 GNPQQVRAVAAALELLHVATLLHDDV--IDEADMRRGQETLNARYGNRVAIYAGDFVLTS 123
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
++++S+ + L+ ++ L M + + + KT
Sbjct: 124 CYQLLSTHLSDLEGITLPTNGMARVVEGELAQMRN-----RYRYDLGLQEYLKRIEGKTA 178
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L +C GA + + + G+ +G+ FQ+ DD+LD
Sbjct: 179 QLFMVSCYMGAKLGQMDDALRA--KKIGQQIGMAFQILDDILDY 220
>gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
Length = 325
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 86/227 (37%), Gaps = 15/227 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L E K++ I+ D + ++ L S GGK +R + + ++N
Sbjct: 13 ELHEELKQVKKIMRDSIQIENKAIKDAILSVLDS-------GGKMVRPAYLILFS-MWND 64
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
N + A + +D +RRG+ T+ + AI AG+ LLT
Sbjct: 65 NRNKEEVLAIAAALELLHVATLFHDDVIDESSVRRGQETISAKLGNRVAIYAGDYLLTVC 124
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++++SS + + + + + QM + + + KT
Sbjct: 125 YQLLSSYS-----KDLVNIQIPTSGMMQVIQGELSQMEERYRLDVTVQDYLKRIEGKTAQ 179
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
L +C G + + R R G +G+ FQ+ DD+LD E D
Sbjct: 180 LFMLSCVMGEQFSVLKEE--ARARQIGHAIGMSFQILDDILDYEIDA 224
>gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768]
Length = 145
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/145 (33%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+PSMDN +RRG+PT H Y + AI+AG+ +L+ AFE+++ + + +++
Sbjct: 1 HDDMPSMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVG 60
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
L G G++GGQ++D++ E D + I KT AL+ +GA++ A+ +
Sbjct: 61 ELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGALIGGANDEQ 120
Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
+ +R + +G+ FQ+ DD+LD E
Sbjct: 121 LQAMRTYANGIGLAFQIIDDILDVE 145
>gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
Geranyltranstransferase (farnesyldiphosphate synthase)
or Geranylgeranyl pyrophosphate synthetase [Streptomyces
venezuelae ATCC 10712]
Length = 349
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 6/191 (3%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK IR A+ + A V AA ++ +D RR + T
Sbjct: 63 PGKAIRPA--LVLAAARALGAEEAPAVKAAAAVELAHNFTLLHDDIVDEDVTRRHRATAW 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ A+IAG+ + A +++ ++L + Q
Sbjct: 121 TVFGVPDALIAGDAMSALALRMLAEDPHPASAAASARLAACIIELCAGQQADC-AFEQRG 179
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + + KTGAL+ +C GA+ A A + E + FG G+ FQL DDL+
Sbjct: 180 PREVSLDECLAMATAKTGALLGASCAIGALYAGAGEEEVAAMDAFGREAGLAFQLIDDLI 239
Query: 229 DCEED---LPK 236
D K
Sbjct: 240 GIWGDPDRTGK 250
>gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
Length = 325
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 17/222 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + ++ RI+ ++ L + M A+++ GGK+ R
Sbjct: 5 DAAFAADVRAGVARIEDLMSTELGKADELM--------AEAVQHLFQAGGKRFRPLFTVL 56
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + MD +RRG P+ + ++ AI+AG
Sbjct: 57 SARL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAG 115
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S + I +T + + + + +
Sbjct: 116 DYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMR-------ETRGAVEGVDEIEHYLKV 168
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + A + + ERL G +G FQ
Sbjct: 169 VYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 210
>gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
Length = 335
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 17/222 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + ++ RI+ ++ L + M A+++ GGK+ R
Sbjct: 15 DAAFAADVRAGVARIEDLMSTELGKADELM--------AEAVQHLFQAGGKRFRPLFTVL 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + MD +RRG P+ + ++ AI+AG
Sbjct: 67 SARL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAG 125
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S + I +T + + + + +
Sbjct: 126 DYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMR-------ETRGAVEGVDEIEHYLKV 178
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + A + + ERL G +G FQ
Sbjct: 179 VYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 220
>gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
Length = 342
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 17/222 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + ++ RI+ ++ L + M A+++ GGK+ R
Sbjct: 22 DAAFAADVRAGVARIEDLMSTELGKADELM--------AEAVQHLFQAGGKRFRPLFTVL 73
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L A + MD +RRG P+ + ++ AI+AG
Sbjct: 74 SARL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAG 132
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++S + I +T + + + + +
Sbjct: 133 DYLFATASRLVSRLGPEAVRIIADTFAQLVTGQMR-------ETRGAVEGVDEIEHYLKV 185
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + A + + ERL G +G FQ
Sbjct: 186 VYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 227
>gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 367
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 16/225 (7%)
Query: 28 ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
H L + + + GK +RS A R A++E +H ++L
Sbjct: 38 DEHFTVADTGILRAVLTGFVGQGKFVRSTFAYLGWLCGRPESDAAARAAASLELLHAFAL 97
Query: 88 IHDDLPSMDN-------------GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
I DD+ + R + V Q+ A++ + L +A ++
Sbjct: 98 IQDDVMDDSATRRGSATVHVQLAHWAERQRRPVGAQFGRSAAVLLSDLCLVWAERMLRES 157
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ ++ + L + G + + + + ++ + E
Sbjct: 158 GLPAESLAKALPVYDLLRSELAVGQFSDLLNENSAAPSLNAVLDIARRKSGNYTVLRPLE 217
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
GA+ A S LR +G +G FQL DDLL D K
Sbjct: 218 LGAVAAGCSPQVLAALRQYGTAIGEAFQLRDDLLGVFGDPLVTGK 262
>gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus]
gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus]
Length = 409
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + + A + ++
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 173
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E A++AG+ +L+ A ++ ++ +Q++ L
Sbjct: 174 DDVIDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIEDLV 233
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
LQ ++E KT +L+ +C++ +++ E
Sbjct: 234 RGEFLQL------GSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 287
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 288 QYGKNVGIAFQLIDDVLDFTS 308
>gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 77/218 (35%), Gaps = 5/218 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFL-VTECASLFNVNHLTALRVGA 77
L + + L A Y GK IR L + + + T +
Sbjct: 50 LPGFYNYIKQEIIQGDIESLNKASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIW 109
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A + +D RRG P+ H + + A + N L+ A IS
Sbjct: 110 AAVIEILHVASLVHDDILDASDTRRGIPSSHTIFGKHRATFSANYLIGRAGRKISELDDI 169
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
I SQ+M +LT+ LQ M + + + + KT AL+ + +
Sbjct: 170 RMFQIYSQIMDNLTNGEYLQAMKQKSFHNFEITLQNY---MIKTYYKTAALIANSLQGVC 226
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + E+ G +LG+ FQ+ DD+LD +
Sbjct: 227 QLTNIKDEICEKSFNIGLHLGVAFQIIDDVLDYTSNSE 264
>gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CDC1551A]
Length = 325
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHCLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 279
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
KL E S + L + L + + + Y L GGK++R++L+ E +
Sbjct: 2 KLAEFSPFFNCKLKNFLDEL------HISKPFKDVVSYTPLAGGKRLRAYLIWELSRYTG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
AL+ G A+E H SLIHDDLP++DN IRRG P+ HI++ E AI+AG+ L+ +
Sbjct: 56 FGEENALKAGIAVELFHSGSLIHDDLPAIDNDTIRRGLPSSHIKFGESKAILAGDFLMLF 115
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ SS R + ++ G+ D+ E Q+ I KTG
Sbjct: 116 PGRVFSSLDL----ETRYIHPILELWQETSLKVVEGEFDDVFPEDESREQMERIHAAKTG 171
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
AL F + I + + + + G G ++Q+ DD+ D E +L K
Sbjct: 172 ALFGFCFAAPFI--REKREKIDEMYKLGVRFGKLYQMMDDIKDVISTESELGK 222
>gi|62959201|gb|AAY23708.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-310]
Length = 145
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T +R++L+
Sbjct: 1 HDDLPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L G GM GGQM+D +++ D QV +Q++KTGAL+ + E GA++ +
Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120
Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
+ LR + ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145
>gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative /
dimethylallyltransferase, putative / prenyl transferase,
putative [Arabidopsis thaliana]
gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 321
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 27/221 (12%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNV---------------NHLTALRVGAA 78
+L SA Y G GK+ RS ++ A+ NV + L + G A
Sbjct: 7 PKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIA 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +D+ RRG ++++ +++AG+ LL+ A +++ K
Sbjct: 67 EITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTE 126
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + L ++ + D ++ +T KT +L+ +C++ A+
Sbjct: 127 VVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKT------YYKTASLISNSCKAVAV 180
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + +G NLG+ FQL DD+LD L K
Sbjct: 181 LTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGK 221
>gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
B-30929]
gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
B-30929]
Length = 325
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 74/219 (33%), Gaps = 6/219 (2%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
RI+ L L + + + + GGK +R S F A
Sbjct: 11 RINLKLIALEPYLLNAVNLPNQPIHHKISQLLKSGGKFLRPGFFY-IYSEFGQEVDPAKI 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A + +D IRRG T+H +Y + AI AG+ L T F +
Sbjct: 70 KAGAAAVELLHVATLIHDDVIDESPIRRGIETIHTEYGQKNAIYAGDYLFTCYFTQVLK- 128
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + + + QM ++ + E F KT L +
Sbjct: 129 ----STQDPANMKRHVDAMQTILAGELDQMKYNFNQQMTEADYFHEITGKTAELFRLCFQ 184
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A+++ AS + G +G +Q+ DD+LD D
Sbjct: 185 QSALVSQASDQIFKLGGEIGLTIGQAYQILDDILDYSGD 223
>gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47]
Length = 616
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 17/213 (7%)
Query: 42 AIRYALLGGKKIRSFLVTECASLF---------NVNHLTALRVGAAIECIHCYSLIH--- 89
A+ + GGK R F+ + L + + +
Sbjct: 278 ALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASL 337
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
D R G+P VH ++ TAI G+ L+ + ++S + +++ L
Sbjct: 338 VHDDIEDGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAETRVDLL 397
Query: 150 LTHNIGLQGMLGGQ-----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + GQ D +D + I +KT A SG MA +
Sbjct: 398 DSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDAS 457
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ +R F NLG+ FQ+ +DL D D K
Sbjct: 458 ALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK 490
>gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
Length = 221
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + Q+ + +D L L+ + A +++T + A+RY+L GGK++R L+ A
Sbjct: 4 LKAYCQQKAALVDEALARLVPRQAGYLET-----VYEAMRYSLFAGGKRLRPILLMAAAD 58
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L V +E IH YSLIHDDLP+MDN RRGKPT H + E AI+AG+GL
Sbjct: 59 AVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGL 118
Query: 124 LTYAFEII 131
LT AFE++
Sbjct: 119 LTAAFEVM 126
>gi|62959187|gb|AAY23701.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-316]
Length = 145
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MD+ +R GKPT+H +DE TA++AG+ L AF+I++ P T +R++L+
Sbjct: 1 HDDMPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L G GM GGQM+D +++ D QV +Q++KTGAL+ + E GA++ +
Sbjct: 61 TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120
Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
+ LR + ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145
>gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
Length = 333
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 17 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 70 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 129 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHCLRVV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 182 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235
>gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium
gonidiaformans ATCC 25563]
Length = 316
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 50 GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK R+ L+ CASL A + +D+ RRGK ++
Sbjct: 34 GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDIVDDSPYRRGKISIQ 93
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+Y + A+ AG+ L+ + + + + S+ + + Q + +
Sbjct: 94 GKYGKDAAVYAGDFLMARIYYYEAVERLNESAALLSKTVEHMCTGEIGQDLCRYREDVSV 153
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+E+ + KT AL AC GA+ A SQ E+L+ FG NLG++FQL DD+L
Sbjct: 154 EEYFQN------IQGKTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLKDDIL 207
Query: 229 DCEE 232
D
Sbjct: 208 DFTS 211
>gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum]
Length = 371
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 15/242 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASL 64
L + + + + L + + +R L GK +RS +
Sbjct: 20 TRWLAPLRRAVLGAVTEFLDTHCREALYGAHVDITELVLRGMLAEGKCVRSTYLYLGWQC 79
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG--------------YIRRGKPTVHIQ 110
ALR A++E +H ++L+ DD+ + RG P +
Sbjct: 80 GAPADEAALRAAASLELLHAFALLQDDVMDESPMRRGRPSAHRAFERWHRERGLPGSSAR 139
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ E A++ G+ L +A +++ R+ G + D
Sbjct: 140 FGESAAVLLGDLCLVWAEQMLRESGVDEAALTRAWPRYDAMRTELAVGQFADLVNDTAGF 199
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + ++ + E GA +A L +GE +G FQL DDLL
Sbjct: 200 PQLDEVLDVARRKSGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRDDLLGV 259
Query: 231 EE 232
Sbjct: 260 FG 261
>gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 190
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KT L + S A + +A Q + E LR FG++LG+ FQL DDLLD D
Sbjct: 30 TYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 89
>gi|118616234|ref|YP_904566.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
Agy99]
gi|118568344|gb|ABL03095.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
Agy99]
Length = 330
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 14/197 (7%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP--------------SM 95
GK +RS + + AL A++E +H ++L+ DD+ +
Sbjct: 96 GKCLRSTFMYLGWLCGAGPNNAALSAAASLELLHAFALLQDDVMDQSPQRRGSPAVHVQL 155
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ RRG ++ E A++ G+ L +A +++ + + +
Sbjct: 156 ARCHQRRGLSGAAARFGESAAVLLGDICLVWAEQMLRESGVEDRRLRQVWPRYDAMRIEL 215
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
G L DI++ + + + ++ + E GA MA + E+L +G+
Sbjct: 216 AVGQLCDLSNDIRNLSTLDAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGD 275
Query: 216 NLGIIFQLADDLLDCEE 232
+G FQL DD+L
Sbjct: 276 AVGEAFQLRDDMLGVFG 292
>gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
K85]
gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
K85]
Length = 282
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291]
Length = 335
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 78/221 (35%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ RI+ ++D L M T+ L A GGK+ R
Sbjct: 15 DPAFAATVRDGVGRIEQLMDTELRSADDIM-TELLTHLFKA------GGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A A + MD +RRG PT ++++ AI+AG+
Sbjct: 68 AQI-GPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + L L + ++ +
Sbjct: 127 YLFATASRLVSRLGPEAV-------QLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ A GA+ + A ++ ERL G +G FQ
Sbjct: 180 YEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 220
>gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104]
gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104]
Length = 325
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 78/221 (35%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ RI+ ++D L M T+ L A GGK+ R
Sbjct: 5 DPAFAATVRDGVGRIEQLMDTELRSADDIM-TELLTHLFKA------GGKRFRPLFTVLS 57
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A A + MD +RRG PT ++++ AI+AG+
Sbjct: 58 AQI-GPDPDAAEVTIAGAVIELVHLATLYHDDVMDEAEVRRGTPTANVRWGNNVAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S + L L + ++ +
Sbjct: 117 YLFATASRLVSRLGPEAV-------QLIAETFAQLVTGQMRETRGRKEGSDPIEHYLKVV 169
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ A GA+ + A ++ ERL G +G FQ
Sbjct: 170 YEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 210
>gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus
Af293]
gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
fumigatus Af293]
gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
fumigatus A1163]
Length = 450
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 78/261 (29%), Gaps = 51/261 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + + + A
Sbjct: 88 KFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRPNDVAPI 147
Query: 81 CIHC-------------------------------------------------YSLIHDD 91
++ ++
Sbjct: 148 SVNDPISSPSILADTNPDTNSLVSESAEAQYDFVGDENILPSQRRLAEITELIHTASLLH 207
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+DN RR + ++Q+ A++AG+ LL A ++ + + + + +
Sbjct: 208 DDVIDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 267
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +KT +L+ +C + A++ ++ E
Sbjct: 268 EGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSAPEVVEAA 327
Query: 211 RCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DDLLD
Sbjct: 328 YSYGRNLGLAFQLVDDLLDYT 348
>gi|17481244|dbj|BAB79205.1| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
Length = 147
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P+MDN +RRG+PT+H YD+ TAI+AG+ LLT+AF+I++ + +R L
Sbjct: 1 HDDMPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTR 60
Query: 149 SLTHNIGLQGMLGGQM----LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
L GL GM+GGQM + + + V +Q+MKTGAL+ + C +GAI+ AS
Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 120
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
++ L +G LG FQ+ADD+LD E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILDVE 147
>gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 337
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 87/234 (37%), Gaps = 9/234 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGG--KKIRSFLVTEC 61
P L + I L L + Q L + A GG K +R L
Sbjct: 5 PESLHRSRDAITPALRTALHLLDEETRHQAAYHLGWIEADGTPADGGGGKAVRPALALLS 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A T L A+E +H +SL+HDDL MD RR + TV + AI+ G+
Sbjct: 65 AQAAGAPAETGLPGAVAVELVHNFSLLHDDL--MDGDEERRHRRTVWTLWGASGAILTGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
LL A E++ L + I Q + +
Sbjct: 123 ALLALAQEVLLDCGLPTGAAAARLLARTTRDLIRGQVQDVAFERRAHVPI---EECVDMA 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ + GA++A A + L +G+ +G+ FQL DD+L D
Sbjct: 180 AGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTDDVLGIWGDPA 233
>gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 383
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 81/250 (32%), Gaps = 20/250 (8%)
Query: 6 PSKLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-- 59
PS + + + +D L DD L + + + L GGK++R+ V
Sbjct: 21 PSTVGDATAAVDAFLASYLDDRLQEARQMDAVFAEEVAGRVAAFVLRGGKRLRTAFVWCG 80
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA--- 116
A+ + T +R+GAA+E + +L+HDD+ A
Sbjct: 81 WLAAGRGGDPGTPVRIGAALELLQACALVHDDVMDGSPVRRGAPAVHADFARAHREAGLR 140
Query: 117 -----------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
++AG+ L +A ++++ R + + G
Sbjct: 141 GSAASYSATAAVLAGDLALAWADDLLTETALAAPHGDRLHREWRAMRSEMVAGQYLDLRA 200
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + + GA+ A A LR G G+ FQL D
Sbjct: 201 QATGSSDGDEARTIATLKSALYTVERPLALGAVSAAADARATAALRSAGRCAGLAFQLRD 260
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 261 DLLGAFGDPA 270
>gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
Length = 288
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
+RI+T+LD+ + + L AIRYA+ GG +IR L A +
Sbjct: 5 RRIETVLDNAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPAA 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AAIE +HC SL+HDDLP D+ RR KP+VH + A++ G+ L+ AFE +
Sbjct: 62 SEAAAAAIELLHCASLVHDDLPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + L G++ GQ + + + + +
Sbjct: 122 ARGVIRSPARLAGLVGLIARAAGSPSGIVAGQAWESEPY-------VDLVEYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAGAAGAPPLPWRLLGECLGAAYQVADDLRDV 213
>gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 275
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 76/193 (39%), Gaps = 16/193 (8%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
+ + GKK+RS L+ A + + + +D +RR
Sbjct: 1 MLSNVKSGKKLRSKLLLAIA------DESEIAFKICAAIELIHLASLLHDDIIDESELRR 54
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
G +V+ ++ A++ G+ L + AF +S + I ++ +
Sbjct: 55 GARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFTSIISDAVVKLAIGELM------- 107
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ + I++ + KT L+ + GAI+A + + +G+NLG+ FQ
Sbjct: 108 DVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEKD---FAEYGKNLGLAFQ 164
Query: 223 LADDLLDCEEDLP 235
+ DD+LD + D
Sbjct: 165 MIDDILDIKSDEK 177
>gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis ATCC 14019]
gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis ATCC 14019]
Length = 366
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 88/262 (33%), Gaps = 28/262 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLL---------LQTASHMQTQHNDRLLSAIRYALLGGK 51
M L L I+T + +L+ S D + AI + GGK
Sbjct: 1 MWITLNMSLDSQKSCIETRISELIYDQFNSLACKNLISSCDKTLKDVVKQAIS-SSEGGK 59
Query: 52 KIRSFLVTECASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMD-------NG 98
++R++L E N + L V A+E +L+HDD+ +
Sbjct: 60 RLRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDIIDESALRRGRPSA 119
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
Y K ++ G+ L T +F+I T L++ + G
Sbjct: 120 YCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLRNPQEVLGEFANMQRNVGIG 179
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRC-F 213
+ +++ + + G + A ++N +L
Sbjct: 180 QVLDLSIEMMSLKNPKKLAESSINVFRWKTASYTTIAPLALGFLSAGLNKNYAIKLANDI 239
Query: 214 GENLGIIFQLADDLLDCEEDLP 235
GE LGI FQ+ADDL+D D
Sbjct: 240 GEPLGIAFQIADDLIDIVSDSA 261
>gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1)
[Caenorhabditis elegans]
gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 393
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 72/220 (32%), Gaps = 31/220 (14%)
Query: 45 YALLGGKKIRSFLVTECASLFNVNHL------------------------TALRVGAAIE 80
Y GGK +R + + N + +
Sbjct: 82 YFQQGGKMLRPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMI 141
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
++ +D RRG +V+ + +++ G+ +L A +I+ S
Sbjct: 142 AEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNII 201
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
++ + ++ L + M KT +L +C S AI+A
Sbjct: 202 SVMASIIEDLVLG---EFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASSCRSAAILA 258
Query: 201 HASQ-NEKERLRCFGENLGIIFQLADDLLDC--EEDL-PK 236
S E +G NLGI FQLADDLLD D K
Sbjct: 259 DGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGK 298
>gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 205
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KT L + S A + +AS + E LR FG++LG+ FQL DDLLD D
Sbjct: 45 TYMEVIRGKTAMLFEASTHSAAALCNASDAQTEALRTFGDHLGVAFQLVDDLLDYLGDAE 104
>gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84]
gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7]
gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407]
gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84]
gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407]
gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7]
gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14]
Length = 329
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 83/225 (36%), Gaps = 4/225 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+++ S M H + Y GK +R+ L A + +
Sbjct: 11 EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA + + + +D RRG H Q+ AI G+ LL Y+ +
Sbjct: 71 YFAAHLEVLHLATLI-HDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKG 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L+ + + + + Q+L+ D + + KT L AC+
Sbjct: 130 LRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQ 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
G+ + S+ + G+ LG+ FQL DDL+D + + K
Sbjct: 190 LGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGK 234
>gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
Length = 329
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ +++ RI+ ++ + L + + M ++ + L A GGK+ R
Sbjct: 9 DAQFAQDVRDGVARIEALMSEELGRADALM-SEAVNHLFQA------GGKRFRPLFTVLS 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L A + MD +RRG P+ + ++ AI+AG+
Sbjct: 62 AQL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + S + I L +T + + D+ +
Sbjct: 121 YLFATASRLTSRLGPEAVRIIADTFALLVTGQMR-------ETRGAADQVDSVDHYLKVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + + + + ERL G +G FQ
Sbjct: 174 YEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQ 214
>gi|218197202|gb|EEC79629.1| hypothetical protein OsI_20844 [Oryza sativa Indica Group]
Length = 355
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 14/237 (5%)
Query: 10 QENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67
+E K+I +L ++LL A + + Y + GGK R V + L
Sbjct: 18 KEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLSVVDSYKLLKGT 77
Query: 68 ------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A +G +E + Y L+ DD+ + + + AI G
Sbjct: 78 NVLSQEDMFLASTLGWCVEWLQAYFLVLDDIMDDSHTRRGQPCW-FRVPQVGSIAINDGV 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ + + G L + + E +
Sbjct: 137 ILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVH 196
Query: 182 K-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + +++ + + +GI FQ+ DD LDC D
Sbjct: 197 RRIVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGD 253
>gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
Length = 335
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ +++ RI+ ++ + L + + M ++ + L A GGK+ R
Sbjct: 15 DAQFAQDVRDGVARIEALMSEELGRADALM-SEAVNHLFQA------GGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L A + MD +RRG P+ + ++ AI+AG+
Sbjct: 68 AQL-GPEPDAWQVTVAGAVIELVHLATLYHDDVMDEAQVRRGAPSANARWGNNIAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A + S + I L +T + + D+ +
Sbjct: 127 YLFATASRLTSRLGPEAVRIIADTFALLVTGQMR-------ETRGAADQVDSVDHYLKVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KT L+ + GA + + + + ERL G +G FQ
Sbjct: 180 YEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQ 220
>gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
DMIN]
gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
DMIN]
Length = 326
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 12/223 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRL---LSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
++I+ I+ + + + + ++ Y + GK IR V +
Sbjct: 6 LEKINFIIKNEIEIFETLFRNNFYSKIPLIQEINNYFFKIKGKYIRPIFVFLITKMLGNI 65
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ IE IH SLIHDD+ +D RRG +++ + TA+I G+ + + +
Sbjct: 66 SKKTYDLAILIELIHTASLIHDDV--IDFSNTRRGFLSINAIWQNKTAVIFGDYIFSKSL 123
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
I+ + + + M FI E +I KT L
Sbjct: 124 N-IAIKNNYIDYLNLISKTIEQMSEGEILQMKYFNNF-----FIKEYIYNIIIFKKTAIL 177
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ CE A + + ++ FGE G+ FQ+ DDLLD +
Sbjct: 178 ISACCEGCAKSLNKKKKIVLNIKKFGELAGMAFQIKDDLLDYK 220
>gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Bacteroides Thetaiotaomicron
gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Bacteroides Thetaiotaomicron
Length = 334
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+D + + + N L S I + GK +R LV A L+ L
Sbjct: 13 IEAELEDFKALFDTPL-SDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLH 71
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
++E +H SL+HDD+ +D RRG+ +V+ ++ +++AG+ ++++
Sbjct: 72 AAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVSVLAGD-------YLLATS 122
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFAC 193
+ +++ ++ L + F + + KT AL
Sbjct: 123 LVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACA 182
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E+ A+ + E R GE +GI FQ+ DD+ D D K
Sbjct: 183 EAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 224
>gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
3_1_5R]
Length = 316
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 50 GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK R+ L+ CASL A + +D+ RRGK ++
Sbjct: 34 GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDIVDDSPYRRGKISIQ 93
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+Y + A+ AG+ L+ + + + + S+ + + Q + +
Sbjct: 94 GKYGKDAAVYAGDFLMARIYYYEAVERLNESAALLSKTVEHMCTGEIGQDLCRYREDVSV 153
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+E+ + KT AL AC GA+ A SQ E+L+ FG NLG++FQL DD+L
Sbjct: 154 EEYFQN------IQGKTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLKDDIL 207
Query: 229 DCEE 232
D
Sbjct: 208 DFTS 211
>gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018]
Length = 360
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 86/255 (33%), Gaps = 28/255 (10%)
Query: 8 KLQENSKRIDTILDDLL---------LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
L I+T + +L+ S D + AI + GGK++R++L
Sbjct: 2 SLDSQKSCIETRISELIYDQFNSLACKNLISSCDKTLKDVVKQAIS-SSEGGKRLRAYLA 60
Query: 59 TECASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMD-------NGYIRRGKP 105
E N + L V A+E +L+HDD+ + Y K
Sbjct: 61 LEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDIIDESALRRGRPSAYCALSKA 120
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
++ G+ L T +F+I T L++ + G + +
Sbjct: 121 CNSKHIGIGLGLMLGDILATQSFDITRKACTNLRNPQEVLGEFANMQRNVGIGQVLDLSI 180
Query: 166 DIQDEFIDETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRC-FGENLGII 220
++ + + G + A ++N +L GE LGI
Sbjct: 181 EMMSLKNPKKLAESSINVFRWKTASYTTIAPLALGFLSAGLNKNYAIKLANDIGEPLGIA 240
Query: 221 FQLADDLLDCEEDLP 235
FQ+ADDL+D D
Sbjct: 241 FQIADDLIDIVSDSA 255
>gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
Length = 340
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 15/232 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L + E+ ++ +L + + + + + + GGK++R +
Sbjct: 18 MD-TLTELVAEDLSSVEALLSERAISSVATIPDMSAYLIG-------AGGKRLRPLITLA 69
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L AA + + +D +RRGK + + +I+ G
Sbjct: 70 AAYAAGGKGSAPLHSLAAAVEYIHTATLL-HDDVVDESDLRRGKKAAKMLWGNSASILVG 128
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L AF ++ ++ +I S + Q G+ I
Sbjct: 129 DFLFARAFTLMVETRSLRILDILSNASCVIAEGEVKQLAAIGKADLPI------EDYMDI 182
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT AL A +GA+ A E + L +G LG FQL DD LD +
Sbjct: 183 VEAKTAALFEAAARAGALTVVAEGKESDGLAEYGRRLGRAFQLVDDALDYDG 234
>gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
JV-V03]
gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
JV-V03]
Length = 338
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 82/219 (37%), Gaps = 8/219 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
++ + ++ H+ + L A+ GK +R V + + +
Sbjct: 20 QVQKDIIEINQIILKHVNS-VPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKQD 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A ++ +D +R G+P++ +Y + A+ AG+ L + ++S
Sbjct: 79 ELKKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
Q ++ + +G Q + + I E + K KTG L A
Sbjct: 139 -ENAQSLHSVIADGKTMQNILVG----ETEQYNNAYNINISEKEYLNQIKGKTGVLFGLA 193
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
C GA + + + + FGE LG FQL DD+LD
Sbjct: 194 CFIGAYESGIKVTKALKAKQFGEYLGQAFQLRDDILDYT 232
>gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex]
Length = 391
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 84/219 (38%), Gaps = 13/219 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + ++ L+ +Y G GK IR + A N + R +
Sbjct: 81 LYDDIRELLSKTQATLVPIAQYYFDGKGKAIRPVITLLMAKAINYHLGENSRNVVEKQMK 140
Query: 83 ------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
++ +D RR K +V+ + + +I+AGN ++ + EI ++ ++
Sbjct: 141 IAQIVEMIHTASLVHDDVVDAADSRRNKSSVNKVWGQKKSILAGNYVVGRSIEICTAIES 200
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
N+ +++ L +Q ++ KT +L+ C++
Sbjct: 201 HEVLNLITKIFSELISGELMQL------DGTANKEEWFDHYLEKTFKKTASLIANGCQAV 254
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++A AS + FG LG+ FQL DDLLD
Sbjct: 255 SVVAGASSATQTNAFQFGRQLGMAFQLVDDLLDFVSTSA 293
>gi|226508116|ref|NP_001141329.1| hypothetical protein LOC100273420 [Zea mays]
gi|194704004|gb|ACF86086.1| unknown [Zea mays]
gi|238008686|gb|ACR35378.1| unknown [Zea mays]
Length = 355
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 69/244 (28%), Gaps = 14/244 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +E ++ ++L A + + + Y +LGGK R V +
Sbjct: 15 ADTKTAFKEIYSKLKQ---EMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVVDSY 71
Query: 63 SLFNVNH---LTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TA 116
+ + + + + + MDN RRG+P A
Sbjct: 72 KILKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIA 131
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ G L + I+ + + + G + + + E
Sbjct: 132 VNDGIILRNHISRILQRHFKGKPYYVDIIDLFNEVEFKTASGQMLDLITTHEGEKDLTKY 191
Query: 177 VFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + ++A + ++ +G FQ+ DD LDC
Sbjct: 192 NLTVHRRIVQYKTAYYSFYLPVACALLLAGENLENFVDVKNILVEMGTYFQVQDDYLDCF 251
Query: 232 EDLP 235
D
Sbjct: 252 GDPE 255
>gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 324
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+D + + + N L S I + GK +R LV A L+ L
Sbjct: 11 IEAELEDFKALFDTPL-SDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLH 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
++E +H SL+HDD+ +D RRG+ +V+ ++ +++AG+ ++++
Sbjct: 70 AAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVSVLAGD-------YLLATS 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFAC 193
+ +++ ++ L + F + + KT AL
Sbjct: 121 LVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACA 180
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E+ A+ + E R GE +GI FQ+ DD+ D D K
Sbjct: 181 EAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222
>gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 380
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 18/230 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
+ + + ++ ++ L + + A ++ + G K++R LV
Sbjct: 13 DRTVEAGVRAGLAAVEAGLLEATKSDVPF--------ITEAAQHLVRAGAKRLRPLLVLL 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + + +E H +L HDD+ +D+ RR P +D A++ G
Sbjct: 65 AARFGDPDAPGVVPSAVVVELTHLATLYHDDV--LDDADARRRTPATDANWDNSVAVLTG 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A +++ + +T I G +
Sbjct: 123 DFLFARASHLLADLGPEAVRIQADAFRQQVTGQILETAGPSGDRDP-------IEHYLEV 175
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ G+L+ + GA+ + A + L +GE LG+ +LA+D+LD
Sbjct: 176 LAGRAGSLIAVSGRLGALASGAGREVAGVLARYGERLGVACRLAEDVLDI 225
>gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu002]
gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu003]
gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu004]
gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu005]
gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu006]
gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu007]
gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu008]
gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu009]
gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu002]
gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu003]
gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu004]
gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu005]
gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu006]
gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu007]
gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu008]
gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu009]
Length = 333
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 17 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 70 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 129 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 182 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235
>gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92]
Length = 331
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 15 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 68 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 127 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 180 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233
>gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987]
Length = 331
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 15 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 68 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 127 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 180 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233
>gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
C]
gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
C]
Length = 333
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 17 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 70 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 129 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 182 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235
>gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca
wickerhamii]
Length = 195
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
+ + + +D LD Q+ +RL SA+RY+LLGG K++R L
Sbjct: 72 FDFRVYMSQRAALVDAALD-------VAAPLQYPERLHSAMRYSLLGGGKRVRPALCLAA 124
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L A+ A+E IH SLIHDDLP+MD+ +RRG+P H + E AI+AG+
Sbjct: 125 CELVGGCLEVAMPAACAVEMIHTMSLIHDDLPAMDDDDVRRGQPANHRAFGEDIAILAGD 184
Query: 122 GLLTYAFEIIS 132
LL AFE ++
Sbjct: 185 ALLALAFEHVA 195
>gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra]
Length = 331
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 15 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 68 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 127 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 180 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233
>gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
F11]
gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 1435]
gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
str. Haarlem]
gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 605]
gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T92]
gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 4207]
gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN R506]
gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN V2475]
gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
AF2122/97]
gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
str. Haarlem]
gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
F11]
gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 1435]
gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T46]
gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 605]
gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T92]
gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
EAS054]
gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
GM 1503]
gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
T85]
gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
W-148]
gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
KZN 4207]
Length = 325
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)]
Length = 386
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 5/231 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLG--GKKIRSFLVTECASL 64
L E+ +D L + M+ ++ A G GK IR LV A+
Sbjct: 53 LSESRASVDPELRSAIATLPESMRRVALYHFGWQHADGTPAAGNAGKAIRPALVLTAAAA 112
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A V AA ++ MD RR +PT + + AI+AG+ L
Sbjct: 113 LGGPGARAAAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFGDADAILAGDALQ 172
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + ++ ++L + Q M + + + ++ + K
Sbjct: 173 ALALRLFAADPHPASAAAATRLADCVMELCEGQH-ADTAMERPPPDEVTLDETLVMAEAK 231
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
TGAL+ AC GA+ A A+ + E L FG G+ FQL DD++ D
Sbjct: 232 TGALLGCACAVGALYAGAATEDVEALDAFGREPGMAFQLIDDVIGIWGDPA 282
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 157
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E +H SLI DDLP MDN +RRGKPT H + E AI++G LL AFE ++ + +
Sbjct: 3 EMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVS 60
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L +IG +G++ GQ D+ + + + I KTG+L+ +
Sbjct: 61 SKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAV 120
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
GA++ ++ E E++R F +G++FQ+ DD+LD
Sbjct: 121 IGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDVT 157
>gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115]
Length = 329
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 63/196 (32%), Gaps = 8/196 (4%)
Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYI 100
Y GGK IRS L+ A V H T A + D+
Sbjct: 31 DYPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQDDSEE 90
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+P +H Y AI G+ L Y + + ++ Q +
Sbjct: 91 RRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEG---QHLD 147
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + + + M+Q + GA+ A G LG
Sbjct: 148 LSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALGSA 205
Query: 221 FQLADDLLDCEEDLPK 236
FQ+ DD+L+ D K
Sbjct: 206 FQIRDDVLNLLGDPLK 221
>gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
94_M4241A]
gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 325
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|62959235|gb|AAY23725.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-475]
Length = 147
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
R GKPTVH YDE TA++AG+ L AFEI++ P T +RS+L+ +L G+ GM
Sbjct: 13 RHGKPTVHKVYDEATAVLAGDALHALAFEILADPGTCSDPFVRSELITTLGTASGMNGMA 72
Query: 161 GGQMLDIQDEFIDETQVFMIQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
GGQM+D+ + KTGAL+ + E GAI+ + LR + +
Sbjct: 73 GGQMMDMVADEEGVEYDLHTITRLQQLKTGALLAASVEMGAILGRVPPEGRAHLRAYARD 132
Query: 217 LGIIFQLADDLLDCE 231
+G+ FQ+ADD+LD E
Sbjct: 133 IGLAFQIADDILDVE 147
>gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115]
Length = 341
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 63/196 (32%), Gaps = 8/196 (4%)
Query: 44 RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYI 100
Y GGK IRS L+ A V H T A + D+
Sbjct: 43 DYPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQDDSEE 102
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+P +H Y AI G+ L Y + + ++ Q +
Sbjct: 103 RRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGAMEEFLTMIHRTAEG---QHLD 159
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + + + M+Q + GA+ A G LG
Sbjct: 160 LSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALGSA 217
Query: 221 FQLADDLLDCEEDLPK 236
FQ+ DD+L+ D K
Sbjct: 218 FQIRDDVLNLLGDPLK 233
>gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
Length = 274
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ A ++ +E IH SL+HDD+ +D +RRG+ T + ++
Sbjct: 1 MIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAA 58
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+++ G+ + T AF++++ ++ +I + L Q M + ++
Sbjct: 59 SVLVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMR-- 116
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ KT L A ++ AI+A ++ +++ L+ +G LG FQL DD+LD +
Sbjct: 117 ----VIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANAQ 172
Query: 234 -LPK 236
L K
Sbjct: 173 ALGK 176
>gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC]
gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC]
Length = 293
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ ++ L + S + + + + YAL GGK+IR LV A +++ L
Sbjct: 14 IEAGIESSLEEFGSKGLS-----VRAPVEYALTSGGKRIRPMLVCMIAKGLDMSRD-VLD 67
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AIE IH +LI DDLP MD+ RRG+PTVH +DE +A++A L+ A+ I
Sbjct: 68 AALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLN 127
Query: 135 ---------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ D + N G+ G+LGGQ D+ + V I KT
Sbjct: 128 AKKLKSQGVDPKEVDIAYDIISDVTDKNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKT 187
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
GAL AC SG + ++ F + G++FQ+ DD+LD +D
Sbjct: 188 GALFEIACVSGWLFGGGDPLCVPQIIEFSQTFGLLFQMKDDILDIHQD 235
>gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
F Lactobacillus Brevis Atcc 367
gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
F Lactobacillus Brevis Atcc 367
Length = 335
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 72/216 (33%), Gaps = 9/216 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA
Sbjct: 19 TALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYLFSTFGNAATPAQLQAGA 75
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A I + D D+ R + Y +++ S +
Sbjct: 76 AAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTTDR 135
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
M + Q E I KT L +C GA
Sbjct: 136 SLIQNHIDAMHRILQGELHQM------DLNYREDITLDAYLNEIAGKTAELFALSCYQGA 189
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+A A Q+ +R R G +G +Q+ DD+LD D
Sbjct: 190 QLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD 225
>gi|115465209|ref|NP_001056204.1| Os05g0543400 [Oryza sativa Japonica Group]
gi|52353430|gb|AAU43998.1| putative farnesyl pyrophosphate synthase [Oryza sativa Japonica
Group]
gi|113579755|dbj|BAF18118.1| Os05g0543400 [Oryza sativa Japonica Group]
gi|215707197|dbj|BAG93657.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712400|dbj|BAG94527.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632427|gb|EEE64559.1| hypothetical protein OsJ_19411 [Oryza sativa Japonica Group]
Length = 355
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 14/237 (5%)
Query: 10 QENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67
+E K+I +L ++LL A + + Y + GGK R V + L
Sbjct: 18 KEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLSVVDSYKLLKGT 77
Query: 68 ------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ A +G +E + Y L+ DD+ + + + AI G
Sbjct: 78 NVLSQEDMFLASTLGWCVEWLQAYFLVLDDIMDDSHTRRGQPCW-FRVPQVGSIAINDGI 136
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ + + G L + + E +
Sbjct: 137 ILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVH 196
Query: 182 K-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + +++ + + +GI FQ+ DD LDC D
Sbjct: 197 RRIVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGD 253
>gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
H37Ra]
gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
H37Rv]
gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
H37Ra]
Length = 325
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 335
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
G M D ++ I MKT L +CE GAI+ A+ +++ L +G NLG+I
Sbjct: 213 YGCMYDAGMTSGQADKIKEIHLMKTAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLI 272
Query: 221 FQLADDLLDCEED 233
FQ DD+ D E+D
Sbjct: 273 FQAKDDIEDYEQD 285
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE
Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++S
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLS 120
>gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae]
gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16]
Length = 392
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 94/265 (35%), Gaps = 38/265 (14%)
Query: 7 SKLQENSKRI-DTILDDLLLQTASHMQTQHNDR-----LLSAIRYALL-GGKKIRSFLVT 59
+ +Q++ +++ + I++ L+ Q AS D L Y GGK +R +
Sbjct: 36 AFVQDHVRQMQNDIMEQLIPQDASGAVENLADLNVTSNLGRMTHYYFQQGGKMLRPTVSL 95
Query: 60 ECASLFNVNHL------------------------TALRVGAAIECIHCYSLIHDDLPSM 95
+ N + + ++ +
Sbjct: 96 LMGNACNSAMNRSIPEEQIAIPISERSAISSHLIVCQNQYKIGMIAEMIHTASLVHDDVI 155
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
D RRG +V+ + +++ G+ +L A +I+ + K N+ + + + +
Sbjct: 156 DEANTRRGSASVNAVWGNKMSVLVGDFILARATQIL---CSIGKPNVIAVMASIIEDLVL 212
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFG 214
+ M KT +L +C S AI+A +S N + +G
Sbjct: 213 GEFMQMSVTPSEATPSQRMVAYIEKTHRKTASLFASSCRSTAILADSSNSNLHQTAYEYG 272
Query: 215 ENLGIIFQLADDLLDC--EEDL-PK 236
NLGI FQLADDLLD D K
Sbjct: 273 RNLGIAFQLADDLLDFIATSDEMGK 297
>gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
Length = 382
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 87/241 (36%), Gaps = 22/241 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
M L +QE +T + DL T N+ L +Y A K +R L+
Sbjct: 49 MQDKLGRYIQEMR---ETFIQDL---------TTSNELLTEISQYYAKRPSKLMRPRLIL 96
Query: 60 ECASLFNVNHLTALRVGAAIECI----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A N + + + + + +D RRG + +Y
Sbjct: 97 LTALAVNASVGERDALPQQVRLAEVVEMIHVVSLLHDDVIDESDTRRGDMSAPARYGNKN 156
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ---GMLGGQMLDIQDEFI 172
+I+AG+ +L A +I++ + ++ +L +Q +
Sbjct: 157 SILAGDFVLGRAMSLIATLGHFDAMREIAGVVTTLVEGEIIQAEDSIALSDKARAGQAAD 216
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGIIFQLADDLLDC 230
+KTG+L A S A+++ +++ L +G LG+ FQ+ DD LD
Sbjct: 217 QWGSYMERIFLKTGSLFARALRSTAMLSGLPSDDERVLAVGDYGTELGLAFQIIDDALDF 276
Query: 231 E 231
+
Sbjct: 277 K 277
>gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
Length = 306
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D L + L + + + S GGK+IR + A + A
Sbjct: 1 MESLDERLVEALEGSVELAKKIGEYIIRS-------GGKRIRPRITLAVAKGLGLEEKDA 53
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L + +AIE IH SL+HDD+ +D RR PTV +++ A+++G+ L A II+
Sbjct: 54 LDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIA 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
K ++ + ++++ + LQ + G + + I KTG L +
Sbjct: 112 GKKVEMV-DYVAKVVEDMVKAEILQEAVRGSVHLDL------ETYYRIIDGKTGRLFGAS 164
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A + E L G +G FQ+ DD+LD K
Sbjct: 165 FALPAYYHGKT--YWEELDRAGTLVGRAFQIVDDVLDYFPGTGK 206
>gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
Length = 324
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+D + + + N L S I + GK +R LV A L+ L
Sbjct: 11 IEAELEDFKALFDTPL-SDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLH 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
++E +H SL+HDD+ +D RRG+ +V+ ++ +++AG+ ++++
Sbjct: 70 AAVSLELLHTASLVHDDV--VDESTERRGQLSVNAVFNNKVSVLAGD-------YLLATS 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFAC 193
+ +++ ++ L + F + + KT AL
Sbjct: 121 LVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACA 180
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E+ A+ + E R GE +GI FQ+ DD+ D D K
Sbjct: 181 EAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222
>gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3]
gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3]
Length = 329
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 83/225 (36%), Gaps = 4/225 (1%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+++ S M H + Y GK +R+ L A + +
Sbjct: 11 EIERGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA + + + +D RRG H Q+ AI G+ LL Y+ +
Sbjct: 71 YFAAHLEVLHLATLI-HDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKG 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L+ + + + + Q+L+ D + + KT L AC+
Sbjct: 130 LRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQ 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
G+ + S+ + G+ LG+ FQL DDL+D + + K
Sbjct: 190 LGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGK 234
>gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
Length = 324
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+D + + + N L S I + GK +R LV A L+ L
Sbjct: 11 IEAELEDFKALFDTPL-SDSNALLDSVITHIRKRNGKMMRPILVLLVARLYGAVTPATLH 69
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
++E +H SL+HDD+ +D RRG+ +V+ ++ +++AG+ ++++
Sbjct: 70 AAVSLELLHTASLVHDDV--VDESTERRGQLSVNAVFNNKVSVLAGD-------YLLATS 120
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFAC 193
+ +++ ++ L + F + + KT AL
Sbjct: 121 LVHAEQTNNYEIIRLVSSLGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACA 180
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
E+ A+ + E R GE +GI FQ+ DD+ D D K
Sbjct: 181 EAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222
>gi|326490760|dbj|BAJ90047.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531764|dbj|BAJ97886.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 73/238 (30%), Gaps = 12/238 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVN 68
+ RI L + LL+ + T+ + + + + Y +LGGK R V + L
Sbjct: 15 KAAFARIYDALKEELLRDPAFDYTESSHQWIDRMLDYNVLGGKCNRGLSVVDSYKLLKGV 74
Query: 69 H---LTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNG 122
+ + + + + + MD+ + RRG+P A+ G
Sbjct: 75 DALTEEEMFLASTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGFIAVNDGIL 134
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + ++ + + + G + + + E + +
Sbjct: 135 LRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHR 194
Query: 183 -----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + + +G FQ+ DD LDC D
Sbjct: 195 RIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPE 252
>gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 325
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 81/220 (36%), Gaps = 11/220 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L+ LL+ + + R+L+ ++ GGK +R + F A
Sbjct: 19 LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSE-FGEKIPADKLRAGAA 74
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D +RRG T+H QY + AI AG+ L T F+ +
Sbjct: 75 AIELLHVATLIHDDVIDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLK-----S 129
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + L + + QM + + + F KT L + E AI+
Sbjct: 130 THDATDLQRHIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAIL 189
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
HA +N G +G +Q+ DD+LD D KK
Sbjct: 190 THAPRNIVTLGGEIGLAIGQAYQIQDDILDYGGDSSQTKK 229
>gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
Twist]
Length = 379
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 77/248 (31%), Gaps = 36/248 (14%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT- 71
+ ++T + +L + ++H + + ++ GGK++R+ L A
Sbjct: 29 LEMVNTKISRFILNNKT---SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENL 85
Query: 72 -------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI- 117
+ + S LP++ + + + ++ E
Sbjct: 86 FELISDIAVAIELFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTA 145
Query: 118 ----------IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ + A + + + + M L H + + ++G M +
Sbjct: 146 SAILAGDMLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVL 205
Query: 168 QDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ + ++ K + GA A+ E L+ F +G+
Sbjct: 206 HEHRWRQLSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGL 265
Query: 220 IFQLADDL 227
FQ+ +D+
Sbjct: 266 AFQMRNDI 273
>gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae
ARSEF 23]
Length = 420
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 52/267 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + L +Y GK +R +V + +
Sbjct: 60 QFLTGNIRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATYLCPKNPQPETVHSA 119
Query: 81 CIHC-----------------------------------------------YSLIHDDLP 93
++
Sbjct: 120 RAIDSSISPVTILADVNPSAMPLTSNEPEMKDGNLDILPSQRRLAEITELIHTASLLHDD 179
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
+D+ RRG P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 180 VIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHVEVVELLATVIANLVEG 239
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ + +KT +L+ +C + A++ +A +
Sbjct: 240 EFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRAAALLGNADATTVDAAYS 299
Query: 213 FGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD +DL K
Sbjct: 300 YGRNLGLAFQLVDDMLDYTRSGKDLGK 326
>gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
CPHL_A]
Length = 325
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGG 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Citrate
gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
From Lactobacillus Brevis Atcc 367 Complexed With
Citrate
Length = 334
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 72/216 (33%), Gaps = 9/216 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
T L D LL+T + ++L+ ++ GGK +R ++ N L+ GA
Sbjct: 26 TALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYLFSTFGNAATPAQLQAGA 82
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A I + D D+ R + Y +++ S +
Sbjct: 83 AAIEILHVGTLIHDDVIDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTTDR 142
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
M + Q E I KT L +C GA
Sbjct: 143 SLIQNHIDAMHRILQGELHQM------DLNYREDITLDAYLNEIAGKTAELFALSCYQGA 196
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+A A Q+ +R R G +G +Q+ DD+LD D
Sbjct: 197 QLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD 232
>gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
02_1987]
gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
02_1987]
Length = 325
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu001]
gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu010]
gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu011]
gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu012]
gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu001]
gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu010]
gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu011]
gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
SUMu012]
Length = 333
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 17 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 70 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 128
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 129 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 181
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 182 HEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235
>gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
Length = 337
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 10/191 (5%)
Query: 50 GKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK IR LV S AA +S +D +RRGKP+V
Sbjct: 55 GKMIRPRLVIMAGSFGKRYAEAEERLYKAAALIEMTHSASLIHDDIVDEAPLRRGKPSVQ 114
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+Y + A+ AG+ L++ + + ++ + ++ Q +
Sbjct: 115 RRYGKSAAVYAGDFLMSRITYHLMQEGLMQSGMVLAKAVEAMCAGEITQALC------RY 168
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + KT AL AC GA+ + ++ RL GE LG +FQ+ DDLL
Sbjct: 169 RADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMFQMRDDLL 228
Query: 229 D---CEEDLPK 236
D E + K
Sbjct: 229 DFLPVTEQIGK 239
>gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
proteobacterium]
gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
bacterium 443]
Length = 292
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 13/225 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTALR 74
+ L++ + + H Q L A+ YA+ GG ++R + A N + A
Sbjct: 9 EQYLEEAMAE---HATAQCPPLLAQALNYAVFPGGARVRPKICKAVALANNSSDVGLANA 65
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+AIE +HC SL+HDDLP D+ RRGKP+VH ++ E A++ G+ L+ AF+ +++
Sbjct: 66 AASAIELLHCASLVHDDLPCFDDATQRRGKPSVHAKFGERIAVLTGDALIVAAFQTLATH 125
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + +G + + + + +
Sbjct: 126 AIH-----AVRTERVPLVTAIVARGVGAPHGICAGQAWECERSVDLSRYHRAKTGALFVA 180
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A A+ + G ++G +Q+ADD+ D D L K
Sbjct: 181 ATCAGAAAAGVDPGPWVNLGASIGEAYQVADDIKDAISDPETLGK 225
>gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740]
gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes]
Length = 300
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 27/229 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+RI+ + + LL+ S Q + +L GK +RS L+ A +
Sbjct: 2 SVLERIEARVKEWLLEVGSKEALQ--------MSQSLSSGKMLRSKLILAIA---GESEE 50
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A L +D+ + RRGKP+++ + AI+ G+ + AF
Sbjct: 51 SLSLCAAVELIQSASLL---HDDVIDDAFTRRGKPSINAAFGNKNAIMLGDIFYSKAFFE 107
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + L + Q ++E + + KT +L+
Sbjct: 108 LTRFSP-------LIARTVSHAVVRLSLGELADVTLAQTFNLEEHLYMQMIEDKTASLIE 160
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A ++ A++ R +G+NLG+ FQ+ DDLLD +D L K
Sbjct: 161 AAAQAAALLVSRDSE---AFRIYGKNLGLAFQIIDDLLDITQDSTTLGK 206
>gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001]
gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
Length = 288
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
+RI+T+LD + + RL AIRYA+ GG +IR L A + A
Sbjct: 5 RRIETVLDGAVAHAEA---PGAPPRLAEAIRYAVFPGGHRIRPRLCVAVALACGDDDPAA 61
Query: 73 LRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
A IE +HC SL+HDDLP D+ RR KP+VH + A++ G+ L+ AFE +
Sbjct: 62 SDAAAGAIELLHCASLVHDDLPCFDDAATRRQKPSVHAAFGVPLAVLTGDALIVAAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + + L G++ GQ + + + + +
Sbjct: 122 ARGAARSPARLAALVGLVARAVGSPSGIVAGQAWESEPH-------VDLVEYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAAAAGAPPLPWRLLGECLGEAYQVADDLRDV 213
>gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68]
Length = 235
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 1/221 (0%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+++ S M H + Y GK +R+ L A + +
Sbjct: 11 EIERGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA + + + +D RRG H Q+ AI G+ LL Y+ +
Sbjct: 71 YFAAHLEVLHLATLI-HDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKG 129
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L+ + + + + Q+L+ D + + KT L AC+
Sbjct: 130 LRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQ 189
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G+ + S+ + G+ LG+ FQL DDL+D + D+
Sbjct: 190 LGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 230
>gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa
102]
Length = 449
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 79/267 (29%), Gaps = 52/267 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + L +Y GK +R +V + +
Sbjct: 89 QFLTGNIRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATYLCPKNPQPETVHGA 148
Query: 81 CIHC-----------------------------------------------YSLIHDDLP 93
++
Sbjct: 149 RAIDSSISPVTILADVNPSAMPLTSNEPEMKDGKLDILPSQRRLAEITELIHTASLLHDD 208
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
+D+ RRG P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 209 VIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHVEVVELLATVIANLVEG 268
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ + +KT +L+ +C + A++ +A +
Sbjct: 269 EFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLISKSCRAAALLGNADATTVDAAYS 328
Query: 213 FGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD +DL K
Sbjct: 329 YGRNLGLAFQLVDDMLDYTRSGKDLGK 355
>gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
NIH2624]
gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
NIH2624]
Length = 449
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 55/270 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + + + GA+
Sbjct: 86 KFLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPMLVLLMSQATALTPRKSRANGASSS 145
Query: 81 CIHC--------------------------------------------------YSLIHD 90
++
Sbjct: 146 VTVNDPITAPSILADNNPDLNPLVSSSLEAKYDFTGDENILPTQRRLAEITELIHTASLL 205
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + ++Q+ A++AG+ LL A ++ + + + +
Sbjct: 206 HDDVIDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 265
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ +KT +L+ +C + A++ ++ E
Sbjct: 266 VEGEFMQLKNTAADEKHPVFTDETIEYYLQKTYLKTASLISKSCRAAALLGDSTPEVVES 325
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD +L K
Sbjct: 326 AYAYGRNLGLAFQLVDDMLDYTVTDAELGK 355
>gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
H37Rv]
gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis
AF2122/97]
gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
[Mycobacterium tuberculosis H37Ra]
gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis F11]
gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis H37Ra]
gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 02_1987]
gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis EAS054]
gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T85]
gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 1435]
gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis C]
gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis str. Haarlem]
gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 605]
gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
02_1987]
gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 210]
gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 4207]
gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN R506]
gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu001]
gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu002]
gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu003]
gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu004]
gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu005]
gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu006]
gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu008]
gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu007]
gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu009]
gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu010]
gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu011]
gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu012]
gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN V2475]
gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
(GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
[Mycobacterium tuberculosis H37Rv]
gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
(GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
[Mycobacterium bovis AF2122/97]
gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis C]
gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis str. Haarlem]
gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
[Mycobacterium tuberculosis H37Ra]
gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis F11]
gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 1435]
gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T46]
gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis CPHL_A]
gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 605]
gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T17]
gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
02_1987]
gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis T92]
gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis GM 1503]
gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis 94_M4241A]
gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu001]
gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu002]
gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu003]
gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu004]
gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu005]
gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu006]
gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu007]
gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu008]
gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu009]
gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu010]
gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu011]
gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis SUMu012]
gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium
tuberculosis CDC1551A]
gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis W-148]
gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis KZN 4207]
Length = 352
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 73/243 (30%), Gaps = 22/243 (9%)
Query: 15 RIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
I L L + A+HM + ++ + + L GGK++R
Sbjct: 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPD 63
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNG----------------YIRRGKPTVHIQYDEVT 115
+ ++ +D + R Q+
Sbjct: 64 PDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSA 123
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+ G+ +A +I+S + + + +I + + G + + + E+
Sbjct: 124 AILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAES 183
Query: 176 QVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + G A + FG +LG+ FQL DD+L
Sbjct: 184 IESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFG 243
Query: 233 DLP 235
D
Sbjct: 244 DPA 246
>gi|63103159|gb|AAY33485.1| farnesyl diphosphate synthase-like protein [Choristoneura
fumiferana]
Length = 397
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 16/242 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
Q + + +L +L ++ + + + L + Y L GGKK R +
Sbjct: 56 QTKKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEML 115
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDL----PSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + I + +G R Q EV +
Sbjct: 116 EKPENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVND 175
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++ I + L+ ++ + + ++ + +F I+
Sbjct: 176 SSLMFSSIFYVLHAHFADKKIYTNLVELFNESLMHTSIGQHLDVTMERRQKSDYSLFTIE 235
Query: 182 KMKT-------GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ G ++A+ + ++ +G FQ+ DD +DC D
Sbjct: 236 RYNAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGD 295
Query: 234 LP 235
Sbjct: 296 ES 297
>gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
TW08/27]
Length = 354
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 77/248 (31%), Gaps = 36/248 (14%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT- 71
+ ++T + +L + ++H + + ++ GGK++R+ L A
Sbjct: 4 LEMVNTKISRFILNNKT---SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENL 60
Query: 72 -------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI- 117
+ + S LP++ + + + ++ E
Sbjct: 61 FELISDIAVAIELFHAAALVHDDLIDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTA 120
Query: 118 ----------IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ + A + + + + M L H + + ++G M +
Sbjct: 121 SAILAGDMLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVL 180
Query: 168 QDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ + ++ K + GA A+ E L+ F +G+
Sbjct: 181 HEHRWRQLSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGL 240
Query: 220 IFQLADDL 227
FQ+ +D+
Sbjct: 241 AFQMRNDI 248
>gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis K85]
Length = 352
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 25/247 (10%)
Query: 15 RIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
I L L + A+HM + ++ + + L GGK++R
Sbjct: 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPD 63
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNG----------------YIRRGKPTVHIQYDEVT 115
+ ++ +D + R Q+
Sbjct: 64 PDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSA 123
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+ G+ +A +I+S + + + +I + + G + + + E+
Sbjct: 124 AILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAES 183
Query: 176 QVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + G A + FG +LG+ FQL DD+L
Sbjct: 184 IESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFG 243
Query: 233 D---LPK 236
D K
Sbjct: 244 DPTVTGK 250
>gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
M]
gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
M]
Length = 384
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 14/197 (7%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP--------------SM 95
GK +RS + + AL A++E +H ++L+ DD+ +
Sbjct: 81 GKCLRSTFMYLGWLCGAGPNNAALSAAASLELLHAFALLQDDVMDQSPQRRGSPAVHVQL 140
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ RRG ++ E A++ G+ L +A +++ + + +
Sbjct: 141 ARCHQRRGLSGAAARFGESAAVLLGDICLVWAEQMLRESGVEDRRLRQVWPRYDAMRIEL 200
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
G L DI++ + + + ++ + E GA MA + E+L +G+
Sbjct: 201 AVGQLCDLSNDIRNLPTLDAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGD 260
Query: 216 NLGIIFQLADDLLDCEE 232
+G FQL DD+L
Sbjct: 261 AVGEAFQLRDDMLGVFG 277
>gi|307111455|gb|EFN59689.1| hypothetical protein CHLNCDRAFT_33543 [Chlorella variabilis]
Length = 346
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 68/245 (27%), Gaps = 15/245 (6%)
Query: 6 PSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC--- 61
S LQE K + + D+++ + + + + Y + GK R V +
Sbjct: 3 SSLLQEFLKVFEQLRDEIVNDELLAGQPEASKQWVKEMMDYNVPLGKLNRGMAVLDVVQS 62
Query: 62 -ASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-A 116
A + MD+ RRG+P + + + A
Sbjct: 63 LAEAKGAAPSAEDEFRANALGWCIEFLQAYFLVADDIMDSSITRRGQPCWYRRPEVGMVA 122
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEF 171
I G L F I+ L + + G L +
Sbjct: 123 INDGIILEACIFRILKKHFGALPCYVHLLELFHEVTFKTAHGQLLDTTTAPIGTVDLSRY 182
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+T + ++ G +A + +G FQ+ DD LDC
Sbjct: 183 TLDTYLRIVTYKTAFYTFYLPVACGLRLAGITDPAAYKLAEDICLQMGRYFQIQDDYLDC 242
Query: 231 EEDLP 235
D
Sbjct: 243 FGDPE 247
>gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 352
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 91/252 (36%), Gaps = 18/252 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLL--------------QTASHMQTQHNDRLLSAIRYAL-L 48
+ +L+E + +D +++ ++ + + + L
Sbjct: 2 EIERELKEAREWLDALMEKYFPRRINEEYLEWLMGKKSRGYDAITVEKAIFEPMWDLLSR 61
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK+ R +L + V+ + IE +H SLI DD+ +
Sbjct: 62 GGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIEDGAEVRRGDKAIHIK 121
Query: 109 IQYDEVTAIIAGNGL-LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
D + + ++ + + + + + L + +IG +G
Sbjct: 122 YGLDIAVNLSSAMYFLPLRILMEMNVDELKYRRLVNAYLEDMIRIHIGQATDIGWHRGLR 181
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
E + + KTG L A AI A S+ E+ R+ F E++G+ FQ+ DD+
Sbjct: 182 DPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAESIGVAFQIQDDI 241
Query: 228 LDCEE--DLPKK 237
L+ +L K+
Sbjct: 242 LNLRSAENLGKE 253
>gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
Length = 224
Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+E IH YSLIHDDLP+MD+ +RRGKPT HI +DE TAI+AG+ L +AF I+
Sbjct: 1 MAVEAIHAYSLIHDDLPAMDDDDLRRGKPTCHIAFDEATAILAGDALQAFAFNIL-CEAV 59
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194
+I+ +++ +L+H G GM+GGQ +D + + Q+ + ++KTGAL+ +
Sbjct: 60 DADPSIQLKMLHTLSHASGANGMVGGQSIDLAAVQQTLTLNQLETMHRLKTGALISASTR 119
Query: 195 SGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
GA+ AS+++ + L + +G+ FQ+ DD+LD D L K+
Sbjct: 120 LGALSTGIASESQLQALHEYANAIGLAFQVQDDILDVTSDTHTLGKQ 166
>gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 317
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 11/211 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+ +++Q A + +DRL++ GK+IRS L+ A+ RV A
Sbjct: 10 EQVIMQVAKNAPAGISDRLVT---LFSRKGKRIRSTLLCLLAN-CGAQKPDIDRVAHACA 65
Query: 81 CIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ L +D +RRG+ T H ++ A++ G+ +L+ + + + +
Sbjct: 66 AVELLHLASLVHDDIIDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQARNI 125
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I S L ++ G M + + + I KT AL+ A G I+
Sbjct: 126 PVIISDAADKLIIGEIMELDHCGDMSLSRKSYNE------IIDGKTAALIDAAARIGGIL 179
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A Q + G + GI FQ+ DDLLD
Sbjct: 180 AGFDQPMVDECAKMGTHFGIAFQIIDDLLDY 210
>gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 360
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 20/242 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
+RID L L + + + AI + L GGK++R
Sbjct: 16 RQRIDKALAGFLAGQRTWLTAVDTALVPVAEAIEAFVLGGGKRLRPAFAYWGFRGAGGAD 75
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------E 113
+ A S + MD RRG+P VH ++ +
Sbjct: 76 ADQVVTALAALEFVQASALI-HDDLMDRSDTRRGEPAVHRRFAARHRGAGWGGDADGFGD 134
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI+ G+ L ++ E++ S + R++ + G + +
Sbjct: 135 AAAILLGDLCLVWSDELLHSAGLDPRVVARARPVFDEMRTEVTVGQYLDVLTQATGDTSV 194
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
E + + + GA +A A + + +G LG FQL DD+L D
Sbjct: 195 ERAGKVARYKSAKYTVERPLLLGAALADAPAHVRAAYSAYGLPLGEAFQLRDDVLGVFGD 254
Query: 234 LP 235
Sbjct: 255 PA 256
>gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 309
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 19/222 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
K ++ L + + ++A + GK+ R +V A
Sbjct: 2 KLVEKELQPFSDSIKELVSSDQPILSMAAKHFFEKRHGKRFRPTIVQLMAK--------- 52
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +D RRG VH Y A++AG+ LL A +++
Sbjct: 53 -TAQLGQIVEMIHVASLIHDDVLDEADTRRGGEAVHKLYSNKVAVLAGDYLLARASVLLA 111
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + + SL +Q + ++ KT +L+C+A
Sbjct: 112 RLENTAVVQVMATALESLVAGEIMQL------KSPAESLLEMESYLRKSYYKTASLICYA 165
Query: 193 CESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEE 232
C S A++ + FG +LG+ +Q+ DD+LD
Sbjct: 166 CRSTALLGGHAYGSTVATACEEFGFHLGLAYQIQDDILDFTA 207
>gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 611
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 16/241 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRY--ALLGGKKIRSFLVTEC--- 61
++ + + D +L + + L AI Y GGK+ R F+
Sbjct: 253 MRAANALFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKRFRPFITLAAYDA 312
Query: 62 ---ASLFNVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVT 115
A + T +G + D+ R G+ T+H Q+
Sbjct: 313 LIKAQQADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRYGRETLHRQHGTGM 372
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFI 172
AI G+ L+ + +++ + + S L+ ++ G + + +
Sbjct: 373 AINIGDYLIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCEGQGAEMAWQESETFEL 432
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I +KT A +G M + +E + F ++G+ FQ+ +DL D +
Sbjct: 433 APLDALQIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRHIGVGFQILNDLKDWQG 492
Query: 233 D 233
D
Sbjct: 493 D 493
>gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
[Callithrix jacchus]
Length = 308
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 21/222 (9%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRV 75
+T+ +LL+ T L Y G K R +V A N++H + V
Sbjct: 1 ETLFQELLIST---------SELKEMSEYYFDGKEKAFRPIIVALMARACNIHHNNSQHV 51
Query: 76 GAAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ I ++ +D+ RRGK TV + E A++AG+ +L+ A
Sbjct: 52 QASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVDKIWGEKKAVLAGDLILSAASIA 111
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ +I +Q++ ++ + + G + + F + KT +L+
Sbjct: 112 LARIGNTTVISILTQVIED---SVRSEFLQLGSKENENERFAHYLEKPF---KKTASLIA 165
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +++ E +G+N+GI FQL DD+LD
Sbjct: 166 NSYKAVSVLGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFTS 207
>gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii
ATCC 12478]
Length = 335
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 80/223 (35%), Gaps = 15/223 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + ++ RI+ ++D L M + S + GGK+ R
Sbjct: 15 DARFATGVRAGVARIEQLMDTELRSADVVM-------IDSLLHLFKAGGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + + A + MD +RRG P+ + ++ AI+AG+
Sbjct: 68 AQV-GPDPEAEEVIIAGAVVELIHLATLYHDDVMDEAEVRRGAPSANARWGNNVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
++++ + + + + L + + Q +
Sbjct: 127 -------YLLATASRLVSRLGPAAVRIVADTFAALVTGQMRETRGAPEGADLIEQYLTVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
KTG+L+ A GA+ + A ++ ERL G +G FQ+A
Sbjct: 180 HEKTGSLIGAAGRFGAMFSGADGDQVERLSRLGGIVGTAFQIA 222
>gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
Length = 335
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 21/239 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ L +L ++ +L D + T + A R+ + GGK++R L
Sbjct: 11 DDALAERLSGRVALVEELLRDAV--------TYADPIAHDASRHLVDAGGKRLRPLLTLL 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L + N + A +E H +L HDD+ MD+ +RRG P+ H + AI+ G
Sbjct: 63 TAELGDGNRREVIDAAAVVELTHLATLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A I+S + + + + + + +
Sbjct: 121 DLLFARASSIVSGLGPEAVRIQAQTFERLCLGQLH-------ETVGPRPDEDPVEHYLQV 173
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT +L+ + GA+ A + + FGE +G+ FQLADD++D D K
Sbjct: 174 LADKTASLIATSARFGAMFAGCRPDVVRTVTQFGEIVGVAFQLADDVIDLTSDGSVTGK 232
>gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 359
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 89/243 (36%), Gaps = 37/243 (15%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF----------- 65
T + + + + +N+ L A +Y L GGK +R LV A
Sbjct: 36 TAIKEHIQSLVT---NTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSARLLE 92
Query: 66 -------NVNHLTALRVGAAIECIH-CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V T L E ++ +D RRG+P +H YD A+
Sbjct: 93 EPIGPLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDKTDTRRGRPALHKVYDTKRAV 152
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ +L A I+ Q+ + L L D D +
Sbjct: 153 LAGDYILARASFYIA----------TLQVPRIVILMTTALEELTSGELIQMDGCFDIPRY 202
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
KT +L+ + S A++A ++ ++ FG++LGI FQ+ DD LD D
Sbjct: 203 EQKSFCKTASLIANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGDEKM 262
Query: 234 LPK 236
L K
Sbjct: 263 LGK 265
>gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
Length = 295
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 76/224 (33%), Gaps = 28/224 (12%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L++ ++RI L + + L GK +RS L+
Sbjct: 2 LEQIAQRIQQFLAQVQSAEVER------------MANLLGQGKMLRSKLILAIC------ 43
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ S +DN RR +++ + AI+ G+ AF
Sbjct: 44 PEHPQLIDFCAIIEMIQSASLLHDDVIDNAQTRRAHDSINHIFGNQNAIMLGDVFYAKAF 103
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
++ T++ L + L + D T+ I + K+ +L
Sbjct: 104 LELTKLDTEIAQ-------LVAHSVMELSRGEIKDVRASDTFHTDITRYIDIIQDKSASL 156
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M +C A++ + R FG N GI FQ+ DDLLD +
Sbjct: 157 MVASCAGAALLGGLDS---QAYRTFGLNFGIAFQIMDDLLDITQ 197
>gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40]
gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
flavus NRRL3357]
gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae]
gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
flavus NRRL3357]
Length = 451
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 80/269 (29%), Gaps = 54/269 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + + +
Sbjct: 89 KFLTKNIRQLLGSGHPTLDKVAKYYTKSEGKHMRPLLVLLMSQATALTPRHGRWSSSPSY 148
Query: 81 CIHC-------------------------------------------------YSLIHDD 91
++ ++
Sbjct: 149 TVNDPISSPSVLADTNPDLNPLVSSSAEAKYDFAGDENILPTQRRLAEITELIHTASLLH 208
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+DN RR + ++Q+ A++AG+ LL A ++ + + + + +
Sbjct: 209 DDVIDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 268
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +KT +L+ +C + A++ ++ E
Sbjct: 269 EGEFMQLKNTASDEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGDSTPQVVEAA 328
Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD +L K
Sbjct: 329 YAYGRNLGLAFQLVDDMLDYTVSDAELGK 357
>gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785]
gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 350
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 9/214 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
++ ++L+ + + D L GK +R V S N N
Sbjct: 39 AINRIILKHVNTVPGLLGDALKDT---FASPGKMLRPACVMLFGSFGPNANQKREELQKI 95
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A ++ +D +R G+P++ +Y + A+ AG+ L + ++S Q
Sbjct: 96 ATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS-ENAQ 154
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + +G Q + + I E + K KTG L AC GA
Sbjct: 155 SLHSVIADGKTMQNILVG----ETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGA 210
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + FGE LG FQL DD+LD
Sbjct: 211 YESGLKVTRALKAKKFGEYLGQAFQLRDDILDYT 244
>gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 339
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R + + A + AAI+ +H +SLIHDD+ D+ RRG+ TV
Sbjct: 50 GKLLRPRFCLLACAAVGGDPQQAEPLAAAIQLLHDFSLIHDDIE--DHSPTRRGRETVWK 107
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ AI G+G+ T A + ++ + + ++ G + +
Sbjct: 108 LWEVPQAINVGDGMFTLAQLSLFRLAEVGVESSVVVEIARRFNQTIIRLCEGQYLDMSFE 167
Query: 170 EFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ +D ++ + KT AL+ A GAI+ +A++ + L +GE LG+ FQ+ DD+
Sbjct: 168 QRLDISEGDYLAMISRKTAALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIEDDM 227
Query: 228 LDCEE 232
L
Sbjct: 228 LGIWG 232
>gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
Length = 186
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
Q + + KT L A + GAI+ AS + L+ +G +G FQ+ DD+LD +
Sbjct: 26 QYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 85
>gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
ATCC 33200]
gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
ATCC 33200]
Length = 350
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 9/214 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
++ ++L+ + + D L GK +R V S N N
Sbjct: 39 AINRIILKHVNTVPGLLGDALKDT---FASPGKMLRPACVMLFGSFGPNANQKREELQKI 95
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A ++ +D +R G+P++ +Y + A+ AG+ L + ++S Q
Sbjct: 96 ATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS-ENAQ 154
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + +G Q + + I E + K KTG L AC GA
Sbjct: 155 SLHSVIADGKTMQNILVG----ETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGA 210
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + FGE LG FQL DD+LD
Sbjct: 211 YESGLKVTRALKAKKFGEYLGQAFQLRDDILDYT 244
>gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 356
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 17/248 (6%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECA 62
+ L + + + + + A+ M+ ++ L + + GK IR LV+ A
Sbjct: 1 MQQYLSQQKQNLTEEIRRACRREAAAMEQKNPRASDLFTLLADFSTRGKMIRGSLVSLGA 60
Query: 63 SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
L AL +GAA+E LIHDD+ D + +
Sbjct: 61 GLVAGEAPPAALPLGAAMELFQSALLIHDDIMDRDTMRRGQSTVHHYYALEAAKYGTDDA 120
Query: 110 -QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
E I AG+ + AF +++ ++ + S +I +
Sbjct: 121 AHLGESLGICAGDVAIFLAFSLVNEAGLIAGNHHELVGLFSREMSIVGTAQMSDVAWSDG 180
Query: 169 DEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ +V + + KT +GA++A A + ++ L +GE LGI+FQ+ DD
Sbjct: 181 WGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRDLLEEYGELLGILFQIRDDE 240
Query: 228 LDCEEDLP 235
L +
Sbjct: 241 LGLFGESE 248
>gi|72536059|gb|AAZ73127.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
DC260]
Length = 301
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL--R 74
L+ LL Q +DR+ +A+R L GK+IR L+ A
Sbjct: 24 AHLEHLLPA------GQQSDRVRAAMRAGTLAQGKRIRPLLLLLAARDMGCELTQNGVLD 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A+E +H SLI DD+PSMDN +RRG+PTVH ++ E AI+A LL+ AFE+I+
Sbjct: 78 LACAVEMVHAASLILDDIPSMDNAQMRRGRPTVHREFGENVAILAAIALLSRAFEVIA-I 136
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192
L +S+ + L+ +GLQG++ GQ D+ D + + M ++KT L
Sbjct: 137 APGLPAIHKSEAIAELSAAVGLQGLVQGQFQDLHDGTQSRSPEAIAMTNELKTSVLFRAT 196
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------LDCEEDLPK 236
+ AI A AS ++RL F ++LG FQL DDL D +D K
Sbjct: 197 LQMAAIAADASPQVRQRLSFFAQDLGQAFQLLDDLADGCKHTGKDVHQDQGK 248
>gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN]
gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
Br4923]
gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae]
gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
Br4923]
Length = 330
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +Q+ RI+ ++D L T M S + GGK+ R
Sbjct: 10 DAAFAATVQDRVVRIEQLMDAELRDTDEVMTE-------SVLHLFAAGGKRFRPLFTVLS 62
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + + A + MD +RRG P+ ++++ AI+AG+
Sbjct: 63 AQI-GPRPDAPEVIIAGAVIELVHLASLYHDDVMDEAEVRRGAPSANLRWSNSVAILAGD 121
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A ++S I +T + + + + Q +
Sbjct: 122 YLFATASRLVSQLGLDAVRIIADTFAQLVTGQMR-------ETRGVPEGADSIEQYLKVV 174
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG L+ A G + A A + ERL G +G FQ
Sbjct: 175 YEKTGCLIGSAGRLGGLFAGAHAEQVERLSRLGSIVGTAFQ 215
>gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
210]
Length = 325
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 15/234 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + + + RI +++ L Q M+ L+ A GG R
Sbjct: 9 DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + + V A + + +D + R P+ + ++ AI+AG+
Sbjct: 62 AQLGSDPDGWEVTVAGAAIELMHLGTLC-HDRVVDESDMSRKTPSDNTRWTNNFAILAGD 120
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A ++ S + + +T + +
Sbjct: 121 YRFATASQLASRLDPEAFAVVAEAFAELITGQMRATR-------GPASHIDTIEHYLRVV 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTG+L+ + + GA ++ A++ + R+ G +G F+++ D++ D
Sbjct: 174 HEKTGSLIGASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227
>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 140
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+PT H + E TA++AG+ LL+ AF ++ ++ + + L IG +G++
Sbjct: 2 RRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGLV 61
Query: 161 GGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
GQ++D+ E ++ I KT L+ A G I+ E E LR + +G
Sbjct: 62 AGQIVDLDSEGEKISLNELEYIHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCIG 121
Query: 219 IIFQLADDLLDCE 231
++FQ+ DD+LD
Sbjct: 122 LLFQVVDDILDVT 134
>gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5]
gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5]
gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 359
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 91/247 (36%), Gaps = 34/247 (13%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF------- 65
++ + + S + +N+ L A +Y L GGK +R LV A
Sbjct: 29 ALVNREVTAIQEHIQSLVTNTNNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSA 88
Query: 66 -----------NVNHLTALRVGAAIECIH-CYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
V T L E ++ +D+ RRG+P +H YD
Sbjct: 89 RLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDSTGTRRGRPALHKVYDA 148
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A++AG+ +L A I+ Q+ + L L D D
Sbjct: 149 KRAVLAGDYMLARASFYIA----------TLQVPRIVILMTTALEELTAGELIQMDGCFD 198
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +L+ + S A++A ++ ++ FG++LGI FQ+ DD LD
Sbjct: 199 IPRYEQKSFCKTASLIANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITG 258
Query: 233 D---LPK 236
D L K
Sbjct: 259 DEKMLGK 265
>gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 335
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
M D ++ I MKT L +CE GAI+ A+ +++ L +G NLG+IFQ
Sbjct: 216 MYDAGMTSGQADKIKEIHLMKTAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLIFQA 275
Query: 224 ADDLLDCEED 233
DD+ D E+D
Sbjct: 276 KDDIEDYEQD 285
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
L+++ + ++L+SA+RY LL K IRSFLV + +FN + V AAIE
Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+H YSLIHDDLP MDN RR + + H ++DE TA++AG+ LLT AFE++S
Sbjct: 70 VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLS 120
>gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 361
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D RRG+ TVH ++D A++ G+ A ++ ++ + ++
Sbjct: 123 HDDLVDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRIITFYAEAVQTI 182
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + Q KT L AC++G + S ++ L
Sbjct: 183 CEGE------LSPVTVAEPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGGGSDDQILAL 236
Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
+G +LG+ FQ+ DD+LD D L K
Sbjct: 237 GRYGYDLGMAFQIIDDVLDFIGDERMLGK 265
>gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212]
gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212]
Length = 220
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
+ G +L+E +++ T ++ L +++ HN LL A+ YALL GGK++R FLV
Sbjct: 75 LTGEQVDRLKEELQQVQTRINRFLEAQFEGIES-HNAPLLEAMEYALLLGGKRVRPFLVY 133
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+A
Sbjct: 134 ATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILA 193
Query: 120 GNGLLTYAFEIISSPKTQLKDN 141
G+ L ++AFEI++ +
Sbjct: 194 GDALQSFAFEILTKTPNISSEQ 215
>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
Length = 146
Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
I KT AL+ A GAI+ S + E+LR F +G++FQ+ DD+LD ++L
Sbjct: 25 EFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQEL 84
Query: 235 PK 236
K
Sbjct: 85 GK 86
>gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
Length = 288
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 12/219 (5%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
+RI+T+LD + + L AIRYA+ GG +IR L A + T
Sbjct: 5 RRIETVLDIAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPAT 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AAIE +HC SL+HDDLP D+ +RR KP+VH + A++ G+ L+ AFE +
Sbjct: 62 SEAAAAAIELLHCASLVHDDLPCFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAFETL 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ T + + L G++ GQ + + + + +
Sbjct: 122 ARGVTCSPTRLAGLVGLIARAAGSPSGIVAGQAWESEPY-------VDLVEYQQAKTGAL 174
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A A+ R GE LG +Q+ADDL D
Sbjct: 175 FAAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRDV 213
>gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760]
gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar
SAW760]
Length = 349
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 82/241 (34%), Gaps = 20/241 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
+++ ++ L ++ + + + + ++G GK++R +
Sbjct: 1 MEQLVSLVEDKLKEVFEEERKRNVCHPFQGECVDVMEKFVMGPGKRLRPLSLLLFFIGGG 60
Query: 67 V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNG-----------YIRRGKPTVHIQYD 112
+R A+E +H +L HDD+ D Y + +
Sbjct: 61 GKIEERKGVIRTACAMELLHDSTLAHDDIMDEDELRRNAPTVVKTFYDKYVERNKEDVKT 120
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ---GMLGGQMLDIQD 169
E I+ + I+ S + L+ + GQ+LD+
Sbjct: 121 EKFLFISRGTTYASSIAIMVGNILYSMAQRLCLESGSNIAEMLLELFDVLNYGQILDMSC 180
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
E + AC G +A S+++ E + +GE+ GI FQ+ DDLLD
Sbjct: 181 LSTVEDYKLNVIMKTAIFFKTTAC-IGLTLAGRSEHDIEIGKEWGEHFGIAFQMRDDLLD 239
Query: 230 C 230
Sbjct: 240 I 240
>gi|63022077|gb|AAY26574.1| farnesyl diphosphate synthase-like protein [Choristoneura
fumiferana]
Length = 397
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 16/242 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
Q + + +L +L ++ + + + L + Y L GGKK R +
Sbjct: 56 QTKKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEML 115
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDL----PSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + I + +G R Q EV +
Sbjct: 116 EKPENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAAVND 175
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L ++ I + L+ ++ + + ++ + +F I+
Sbjct: 176 SSLMFSSIFYVLRAHFADKKIYTNLVELFNESLMHTSIGQHLDVTMERRQKSDYSLFTIE 235
Query: 182 KMKT-------GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ G ++A+ + ++ +G FQ+ DD +DC D
Sbjct: 236 RYNAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQIQDDYIDCYGD 295
Query: 234 LP 235
Sbjct: 296 ES 297
>gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442]
Length = 292
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
L L A+ YA+ GG ++R L A A AAIE +
Sbjct: 14 LAIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELL 73
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
HC SL+HDDLP D+ RRGKP++H + + A+++G+ L+ AF+ ++ +
Sbjct: 74 HCASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGS--SVTH 131
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ G G E ++ + KTGAL A +GA A
Sbjct: 132 PVRMAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGV 191
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
R G ++G +Q+ADD+ D D
Sbjct: 192 PSE---PWRELGNSIGEAYQVADDIQDAIADTA 221
>gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus
lactolyticus ATCC 51172]
gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus
lactolyticus ATCC 51172]
Length = 330
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDR-----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ ++DD + + ++ +D L I+ AL GK +R+ L+ + L +
Sbjct: 12 EKLIDDCVSKVHEEIKNILSDYKSSQNLCDIIKDALTSSGKMLRTKLLISIS-LMGDGEI 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ + A + +D+ +RR + +Y + A+ AG+ ++ F
Sbjct: 71 SKKVISQAAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSY 130
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+++ + + + + + + GQ L + E + F KT +
Sbjct: 131 LANENLYDEIKVIANTIKHMCNGE------VGQNLIKYRLDMGEDEYFENISGKTASFFK 184
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C GA A Q + ER+ FGENLG++FQL DDLLD
Sbjct: 185 TVCYFGARNAGFGQMDTERMVAFGENLGLMFQLKDDLLDLFS 226
>gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
Length = 388
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 67/217 (30%), Gaps = 7/217 (3%)
Query: 21 DDLLLQTASHMQTQHN-DRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
D++L + + Q + L + + Y L K +R L A + AL AA
Sbjct: 20 DEVLEHIEAAIGAQPALEDLRAPLLDYPLRAAKGLRPALCVAAARALGASRSAALPSAAA 79
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-----ISS 133
+E +H LIHDD+ + L + I
Sbjct: 80 LELLHNAFLIHDDVEDESLARRGEPTLQRRYGQATAMNMGDAMLALALGPLLDNTGVIGL 139
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ + ++ + Q ++
Sbjct: 140 GPALEVLDLVRETVVVTAAGQARELEWIRQGRWDFGSDYAAAYEALVVAKTAHYSFITPV 199
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
GA +A + + +L + ++G+ FQ+ DDLL+
Sbjct: 200 VVGATIAEVRGDARAQLAAYARHVGVAFQITDDLLNL 236
>gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
Length = 352
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 74/243 (30%), Gaps = 22/243 (9%)
Query: 15 RIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------- 63
I L L + A+HM + ++ + + L GGK++R
Sbjct: 4 AITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHTVASREPD 63
Query: 64 ----LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR----RGKPTVHIQYDEVT 115
L + + S P+ Y R Q+
Sbjct: 64 PDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSA 123
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI+ G+ +A +I+S + + + +I + + G + + + E+
Sbjct: 124 AILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAES 183
Query: 176 QVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + G A + FG +LG+ FQL DD+L
Sbjct: 184 IESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFG 243
Query: 233 DLP 235
D
Sbjct: 244 DPA 246
>gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
27064]
gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
27064]
Length = 362
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 74/244 (30%), Gaps = 15/244 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQT----QHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
++ + +R D + + A+ + R + +R +L GGK++R L+ E
Sbjct: 13 ERIAAHRRRFDPLFAAYFDRLAAAPGPFTAGRFPARCVELLRDQSLRGGKRLRVALLHEA 72
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A L + L A + + D D R + E
Sbjct: 73 ARLVTDAEVPGLDEAALSVELLHTHGLVHDDIVDDAPLRRGAPSVYYAYRAEFPGQERTA 132
Query: 122 GLLTYAFEIISSPKTQL-----KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
L +++ + +L L+ + GQ LD++ +
Sbjct: 133 VGLAVLAGDLAAFLSVQVLLEAPLPDGLRLALAQEQTRASAETVLGQFLDLERDVPPLPG 192
Query: 177 VFMIQKMKTG----ALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCE 231
+ + + G + A LR + +GI Q+ DD LD
Sbjct: 193 DDFLHTVTEFKSARYSILAPLRLGLLAAGEDPEPYAGELRRYAVLVGIYEQMRDDYLDLF 252
Query: 232 EDLP 235
D
Sbjct: 253 GDPA 256
>gi|327286120|ref|XP_003227779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Anolis
carolinensis]
Length = 351
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 63/236 (26%), Gaps = 16/236 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVN--HL 70
+ + +++D L Q ++ RL + Y +GGK R V L
Sbjct: 23 QIVKDLIEDELHQKD---VSEAFSRLKEVVEYNAIGGKYNRGLTVVSAFGELAGPEQQDP 79
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ + + + E + A N L I
Sbjct: 80 KNFQHAMVVGWCVELLQAFFLVADDIMDGSLTRRGHPCWYKKEGVGLAAVNDSLLLESSI 139
Query: 131 ISSPKTQLKDNIRSQLMLS------LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
K + +L +G L D F +E +++
Sbjct: 140 YRLLKRHCRGQPYYLNLLELFLQSAYQTELGQTLDLISAPPVDLDSFTEERYKAIVKYKT 199
Query: 185 TGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ MA + E R +G FQ+ DD LDC D K
Sbjct: 200 AFYSFYLPVAAAMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDCFGDPDVTGK 255
>gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
ATCC BAA-1163]
gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
ATCC BAA-1163]
Length = 325
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
L +++T + + + GGK +R + + + + + AAIE +H
Sbjct: 21 LALMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILH 80
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+LIHDD+ +D RRG ++ Q+ + TA+ +G+ L F +++ + + +
Sbjct: 81 MATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYASDFRGIQQ 138
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ N + M+ L+I + + KTG L A GA +
Sbjct: 139 YGHHMNAILNGEMTQMVERYDLNISIDQYFKQ-----ISGKTGQLFSLATFLGAYESGNK 193
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
+ G N+G+ FQL DD+LD
Sbjct: 194 IKFAKNAEKIGLNIGVSFQLMDDILDYT 221
>gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026]
Length = 350
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 7/198 (3%)
Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93
L A++ GK +R V S N N A ++
Sbjct: 52 PGLLGDALKDTFASPGKMLRPACVMLFGSFGPNANQKREELQKIATSIETLHNATLIHDD 111
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
+D +R G+P++ +Y + A+ AG+ L + ++S Q ++ +
Sbjct: 112 IIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS-ENAQSLHSVIADGKTMQNIL 170
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
+G Q + + I E + K KTG L AC GA + + + F
Sbjct: 171 VG----ETEQYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGAYESGLKVTRALKAKKF 226
Query: 214 GENLGIIFQLADDLLDCE 231
GE LG FQL DD+LD
Sbjct: 227 GEYLGQAFQLRDDILDYT 244
>gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
Length = 326
Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 7/229 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+PS + + ID + + +Q ++ D + ++ A GGK +R S
Sbjct: 1 MPSYWSKYPE-IDHHITLVCQLIEKRVQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSF 59
Query: 65 FNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ ++ + + +D+ +RRG+ T+ Q+ + A+ G+ L
Sbjct: 60 GQREKQNSEQLTKIAASLEILHMATLIHDDVIDDSPLRRGQVTIQTQFGKDIAVYTGDFL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
T FE+I + + L M ++
Sbjct: 120 FTIFFELILETMQDSPYMKVNAKAMKKILVGELDQMHL-----YFNQKQSIRDYLRSISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT L A GA AS + G ++G+ FQ+ DD+LD
Sbjct: 175 KTAELFRLASSEGAYFGGASPEVVSKAGRIGYHIGMTFQILDDILDYTA 223
>gi|312861915|gb|ADR10437.1| farnesyl pyrophosphate synthase [Withania somnifera]
Length = 343
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 81/249 (32%), Gaps = 20/249 (8%)
Query: 4 GLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L SK + + ++L +LL + + Y + GGK R V +
Sbjct: 3 DLKSKFLD----VYSVLKSELLNDPDLEFTDDSRQWVDKMLDYNVPGGKLNRGLSVIDSY 58
Query: 63 SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
SL N A +G IE + Y L+ DD+ + R +Q +
Sbjct: 59 SLLNDVKELTSEEIFQASALGWCIEWLQAYFLVLDDIMDNSHTRPRSTNAGTKLQKIGMI 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A+ G L + +I+ + + + G + + + +
Sbjct: 119 AVNDGILLHNHIPKILKNHFRPKPYYVDLLDLFPEEEFQTASGQMIDLITTLVGKKDLSK 178
Query: 176 QVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + +MA + + ++ ++GI FQ+ DD LDC
Sbjct: 179 YSLPIHRRIVQYKTAYYSFYLPGACALLMAGENLDNHVDVKHILIDMGIYFQVQDDYLDC 238
Query: 231 EED---LPK 236
D L K
Sbjct: 239 FADPKVLGK 247
>gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
VaMs.102]
gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
VaMs.102]
Length = 451
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 80/266 (30%), Gaps = 51/266 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN-------------- 66
L ++ + L +Y GK IR +V A
Sbjct: 92 KFLTGNIRNLLGSGHPALEKVAKYYTHAEGKHIRPLVVLLMARATALCPKAERQAPTQTY 151
Query: 67 -------------VNHLTALRVGAAIECIHC-------------------YSLIHDDLPS 94
+ ++
Sbjct: 152 AGINSPISPDGILSDVNPTSPFTGPPLDPQQSNSDILPSQRRLAEITELIHTSSLLRDDV 211
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHN 153
+D+ RRG P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 212 IDHSVSRRGSPSANLEFSNKMAVLAGDFLLGRASVALARLRDAEVIELLATVIANLVEGE 271
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
+ +KT +L+ +C + A++ +A E +
Sbjct: 272 FMQLKNTAQDERNPAWSQEAVDYYLRKTYLKTASLISKSCRASALLGNADAATVEAAYAY 331
Query: 214 GENLGIIFQLADDLLDCE---EDLPK 236
G+NLG+ FQL DD+LD +DL K
Sbjct: 332 GKNLGLAFQLVDDMLDYTRSEKDLGK 357
>gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 306
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 21/225 (9%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
RI+ + + L + S + + L S GK +RS L A + +
Sbjct: 6 RIEAKVQEFLKELQSPLVLNLSKNLQS--------GKMLRSKLALSIA---GESEESVRL 54
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ L +D RR KP+V+ + + AI+ G+ L + AF ++
Sbjct: 55 CAIIEMIQNASLL---HDDVIDKATTRRNKPSVNALFGDKNAIMLGDVLYSKAFSELTCF 111
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
R T IG + DE + + + KT AL+
Sbjct: 112 AKDYPQIPRIVANAVTTLAIG----EIEDVALSGAFNADEAKYLAMIEHKTAALIEATAY 167
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A +A + + + +G NLG+ FQ+ DD+LD D L K
Sbjct: 168 AAAFLAGKDEKDARGFQIYGRNLGVAFQIIDDVLDIIADSKTLGK 212
>gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium]
Length = 313
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
L L A+ YA+ GG ++R L A A AAIE +
Sbjct: 35 LAIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELL 94
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
HC SL+HDDLP D+ RRGKP++H + + A+++G+ L+ AF+ ++ +
Sbjct: 95 HCASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGS--SVTH 152
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ G G E ++ + KTGAL A +GA A
Sbjct: 153 PVRMAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGV 212
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
R G ++G +Q+ADD+ D D
Sbjct: 213 PSE---PWRELGNSIGEAYQVADDIQDAIADTA 242
>gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
Length = 382
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 23/248 (9%)
Query: 4 GLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
L KL + + +T + DL + N+ L +Y A K +R L+
Sbjct: 48 ELQDKLGRYIQGMRETFIRDL---------STSNELLTEVSQYYAKRPSKLMRPRLILLT 98
Query: 62 ASLFNVNHLTALRVGAAIECI----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A N + + + + + +D RRG + ++ +I
Sbjct: 99 ALAVNASVGERDALPQQVRLAEIVEMIHVVSLLHDDVIDESDTRRGDLSAPSKFGNKNSI 158
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ---GMLGGQMLDIQDEFIDE 174
+AG+ +L A +I++ + + ++ +L +Q + G+ +
Sbjct: 159 LAGDFVLGRAMSLIAALENFDAMREIAGVVTTLVEGEIIQAEDSIALGEKAKVGQAADQW 218
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGIIFQLADDLLDCE- 231
+KTG+L A S A+++ +++ L +G LG+ FQ+ DD LD +
Sbjct: 219 GSYMERIFLKTGSLFARALRSTAMLSGLPSDDERVLAVGDYGTELGLAFQIIDDALDFKE 278
Query: 232 --EDLPKK 237
D K
Sbjct: 279 TSADSAGK 286
>gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 385
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 81/269 (30%), Gaps = 54/269 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL---------------- 64
L + + L + +Y GK +R LV +
Sbjct: 23 KFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALTPRSSRGGMGIGS 82
Query: 65 -------------------FNVNHLTALRVGAAIECI--------------HCYSLIHDD 91
N E ++
Sbjct: 83 QSADISITNPTILADENPDCNPISSIRHDSAYTSEDSDILPSQRRLAEITELIHTASLLH 142
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+D+ RR P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 143 DDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 202
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +K+ +L+ +C + AI+ ++ + E
Sbjct: 203 EGEFMQLKNTARDDKNPAWTEDTVSYYLQKTYLKSASLISKSCRAAAILGGSTPDVVEAA 262
Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
+G+NLG+ FQL DD+LD +L K
Sbjct: 263 YLYGKNLGLAFQLVDDMLDYTVSEAELGK 291
>gi|297800392|ref|XP_002868080.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
lyrata]
gi|297313916|gb|EFH44339.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
lyrata]
Length = 342
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 19/247 (7%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ L+ + +IL DLL + + L + Y + GGK R V + L
Sbjct: 2 ADLKSTFLDVYSILKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ +G IE + Y L+ DD+ MDN RRG+P + AI
Sbjct: 62 KQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRKPKVGMIAI 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ ++ + + + G + + E
Sbjct: 120 NDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +MA + ++ ++GI FQ+ DD LDC
Sbjct: 180 LQIHRRIVQYKTAYYSFYLPVACALLMAGENLENHTDVKNVLVDMGIYFQVQDDYLDCFA 239
Query: 233 D---LPK 236
D L K
Sbjct: 240 DPETLGK 246
>gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex]
Length = 378
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 91/238 (38%), Gaps = 16/238 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
+L+E+S + ++D+ + L+ +Y G GK IR + A
Sbjct: 51 NKELREDS-LVRQDVEDVYEGIREALTDTQP-LLVPVAQYYFGGDGKAIRPVITLCWAKA 108
Query: 65 FNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
N + L + ++ +DN RR +P+++ + +I
Sbjct: 109 VNCHLGKQTFRRLIQDQKRVCQVLEMIHAAGLYHDDVIDNAESRRSRPSINNVWGVKKSI 168
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+AG+ +L + II+ + +I M+ + + G + + +
Sbjct: 169 LAGDFVLGRSMRIIAEINNEDV-SILLNTMIDHIVIGEIMQLSAGATEEERFAHYVDKTF 227
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT +L+ +C++ +++A A + + G LG+ FQL DD+LD
Sbjct: 228 -----KKTASLLAHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILDFSATSA 280
>gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
Length = 297
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
L L A+ YA+ GG ++R L A A AAIE +
Sbjct: 19 LAIREATGQGCPPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELL 78
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
HC SL+HDDLP D+ RRGKP++H + + A+++G+ L+ AF+ ++ +
Sbjct: 79 HCASLVHDDLPCFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGS--SVTH 136
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ G G E ++ + KTGAL A +GA A
Sbjct: 137 PVRMAQVTAIVAAGVGGPMGICAGQAWECEPRVELEHYHQAKTGALFVAATCAGAAAAGV 196
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
R G ++G +Q+ADD+ D D
Sbjct: 197 PSE---PWRELGNSIGEAYQVADDIQDAIADTA 226
>gi|320163837|gb|EFW40736.1| geranyltranstransferase [Capsaspora owczarzaki ATCC 30864]
Length = 347
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 66/245 (26%), Gaps = 13/245 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTAS--HMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ +L++ DT++ D++ + + + ++Y + GGK R V
Sbjct: 2 TMSEQLKQFLAVFDTLVADVMDVAVNQYETPKESQQWMSENLKYNVPGGKMNRGLSVVST 61
Query: 62 ASLFNVNHLTAL--RVGAAIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAII 118
+ LT + + + M + R + EV+ I
Sbjct: 62 YEILLGRPLTKDELFKAQVLGWSVEWLQAFFLVADDMMDQSQTRRGQPCWYKKPEVSNIA 121
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRS-------QLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ + I K + ++ L + + F
Sbjct: 122 INDSFVIEGSIYILLKKYFRSEPYYVDLLDLLHEVTFQTELGQMLDLITAPEDHVDLTRF 181
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+++ MA + +G FQ+ DD LDC
Sbjct: 182 TLSKYKTIVKYKTAVYSFYLPVAMAMHMAGVKNPAAFAAAHSILMEMGEFFQIQDDYLDC 241
Query: 231 EEDLP 235
D
Sbjct: 242 YGDPA 246
>gi|62959181|gb|AAY23698.1| farnesyl diphosphate synthase [Halomonas sp. JL-104]
gi|62959191|gb|AAY23703.1| farnesyl diphosphate synthase [Paracoccus sp. JL-65]
Length = 143
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG PT H Y E AI++G+ LLT +FE+++ + ++ MLS
Sbjct: 13 RRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVGG 72
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
++ + + Q+ + K KTG L+ FA +G +++ ++E +LR F E++G+
Sbjct: 73 QVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHIGLA 132
Query: 221 FQLADDLLDCE 231
FQ+ DD+LD E
Sbjct: 133 FQIRDDILDVE 143
>gi|62959185|gb|AAY23700.1| farnesyl diphosphate synthase [Bacillus sp. JL-26]
Length = 143
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG PT H Y E AI++G+ LLT +FE+++ + ++ MLS
Sbjct: 13 RRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVGG 72
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
++ + + Q+ + K KTG L+ FA +G +++ ++E +LR F E++G+
Sbjct: 73 QVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHIGLA 132
Query: 221 FQLADDLLDCE 231
FQ+ DD+LD E
Sbjct: 133 FQIRDDILDVE 143
>gi|62959195|gb|AAY23705.1| farnesyl diphosphate synthase [Micrococcus sp. JL-76]
Length = 143
Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG PT H Y E AI++G+ LLT +FE+++ + ++ MLS
Sbjct: 13 RRGLPTNHKVYGEAVAILSGDALLTKSFELVADSPFDDRSKVKIISMLSKAAGAEGMVGG 72
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
++ + + Q+ + K KTG L+ FA +G +++ ++E +LR F E++G+
Sbjct: 73 QVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHIGLA 132
Query: 221 FQLADDLLDCE 231
FQ+ DD+LD E
Sbjct: 133 FQIRDDILDVE 143
>gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
Length = 325
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
L +++T + + + GGK +R + + + + + AAIE +H
Sbjct: 21 LALMQKNIKTDNEPVSKAILEMINSGGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILH 80
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+LIHDD+ +D RRG ++ Q+ + TA+ +G+ L F +++ + + +
Sbjct: 81 MATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLAEYASDFRGIQQ 138
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ N + M+ L+I + + KTG L A GA +
Sbjct: 139 YGHHMNAILNGEMTQMVERYDLNISIDQYFKQ-----ISGKTGQLFSLATFLGAYESGNK 193
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
+ G N+G+ FQL DD+LD
Sbjct: 194 IKFAKNAEKIGLNIGVSFQLMDDILDYT 221
>gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 325
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 85/230 (36%), Gaps = 9/230 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+++ + I+ + A T+ + S + GK IR L+ SL
Sbjct: 4 IEQIVQPIEDYRLAFEEEYAQAFVTESSIVAQSIEKITATRGKHIRPILMGLLVSLQGKE 63
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A + + +D +RRGKPT++ Y +A++ G+ +L+ AF
Sbjct: 64 PNQRTISCAVLLE-MLHMASLIHDDVIDQAPLRRGKPTLNAFYGNHSAVLVGDYILSIAF 122
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ + L L+ LQ + + + + + I + KT L
Sbjct: 123 LRAAEIGGSSLIRTVANLGKHLSEGELLQIQVATERIIDEKNYFS------IIEKKTATL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
G A E ++ G++LGI FQL DD+ D ++ K
Sbjct: 177 FEACAALGMYSIDAKPEELLKMTQLGKHLGIAFQLRDDIFDYTKESEVGK 226
>gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840]
Length = 145
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KTGAL+ +GA++ A + LR + +G+ FQ+ DD+LD E
Sbjct: 92 EYIHLHKTGALLSACVITGAMIGGADDALIKALRTYARGIGLAFQIIDDILDVE 145
>gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica
HM-1:IMSS]
gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 349
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 18/240 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
+++ ++ L ++ + Q + + ++G GK++R +
Sbjct: 1 MEQLVLLVEEKLKEIFEEERKRSTCHQFQAECIDIMEKFVMGPGKRLRPLSLLLFFIGGG 60
Query: 67 V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR--------RGKPTVHIQYDEVT 115
+R A+E +H +L HDD+ D K + D T
Sbjct: 61 GKIEEQKNIIRTACAMELLHDSTLAHDDIMDEDEMRRNAPTIVKTFYDKYIERNKEDVKT 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-- 173
T ++ + ++ +L L NI + +L+
Sbjct: 121 EKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGTNIAEMVLELFSVLNYGQILDMSG 180
Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + MKT G +A S+++ E + +GE+ GI FQ+ DDLLD
Sbjct: 181 LNTVEEYNLNIIMKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRDDLLDI 240
>gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 385
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 71/250 (28%), Gaps = 23/250 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQT----QHNDRLLSA------IRYALLGGKKIRSFLV 58
++++ +D +L + H Q D L A + GGK+IR +
Sbjct: 32 VRDHLAAVDALLGQTMDTLTRHWTDLAGGQPPDVLGDADLPQLLLALLGSGGKRIRPTMT 91
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVT 115
+ T R L MD RRG PTVH Q
Sbjct: 92 YLGWAACAGPDRTGERRQIVTVSAALELLHLFALVHDDVMDESDSRRGVPTVHRQAGRRH 151
Query: 116 AIIAGNGLLTYAFEIISS----------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
A G I+ + ++ + + G
Sbjct: 152 AATGAVGDPELFGTSIAILAGDLALAEAEGMIAETPPATRRLWRHLVVELVVGQRQDLTG 211
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + E GA++A A + + L +G++LG F L D
Sbjct: 212 TAARRRDLPFAHSVAILKSGRYTVQRPLELGAVIAGAPDSTRLALSNYGQHLGEAFALRD 271
Query: 226 DLLDCEEDLP 235
D+L D
Sbjct: 272 DVLGVWGDPA 281
>gi|195608286|gb|ACG25973.1| farnesyl pyrophosphate synthetase [Zea mays]
Length = 355
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 70/226 (30%), Gaps = 11/226 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGA 77
+++L A + + + Y +LGGK R V + + +
Sbjct: 30 EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSYRILKGVDVLSKEETFLAC 89
Query: 78 AIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP 134
+ + + + MDN RRG+P A+ G L + I+
Sbjct: 90 TLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRH 149
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGALM 189
+ + + G + + + ++ + ++Q
Sbjct: 150 FKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNLTVRRHIVQYKTAYYSF 209
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++A + + ++ +G FQ+ DD LDC DL
Sbjct: 210 YLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDLK 255
>gi|62959183|gb|AAY23699.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-24]
Length = 144
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG PT H + E AI+AG+GLLT++F++++ L D + +L+ L G +GM+
Sbjct: 13 RRGNPTNHKVFGEAMAILAGDGLLTFSFQLLA-EDEHLPDEKKVELIALLARCAGPEGMV 71
Query: 161 GGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
GGQ ++ ++ + ++ I KTG L+ F+ +GAIM+ AS E L F ++G
Sbjct: 72 GGQVADIEGENGELTVEELQSIHVRKTGKLLMFSVMAGAIMSDASPGELASLEEFAYHVG 131
Query: 219 IIFQLADDLLDCE 231
+ FQ+ DD+LD E
Sbjct: 132 LAFQIQDDILDVE 144
>gi|195977755|ref|YP_002122999.1| geranyltranstransferase LepA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974460|gb|ACG61986.1| geranyltranstransferase LepA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 289
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
+ RID + + Q+ + L AI Y++ GG K L+
Sbjct: 2 DKLTRIDATIHQYYDR-----QSTVSADLEEAILYSVDGGGKRLRPLILLELLEGFGLAL 56
Query: 70 -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AAIE IH SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F
Sbjct: 57 TDAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ ++ SL + + + ++ ++ I KTG L
Sbjct: 117 ALIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLNIQELSDIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + I+A S + L G +G FQ+ DD+LD +L K
Sbjct: 177 LTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGK 227
>gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
Length = 616
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 73/211 (34%), Gaps = 15/211 (7%)
Query: 42 AIRYALLGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECI-----------HCYSLIH 89
A+ + GGK R F +L +A E +
Sbjct: 285 ALDFLARGGKYSRPFTTLAVYDALTGGEGTSAGGAARVGEYSDSVKRTALAIETFHKASL 344
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
D+ R G T+H +Y TAI G+ ++ + ++S QL +++
Sbjct: 345 VHDDIEDDDAYRYGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRIIDC 404
Query: 150 LTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
L G D D+ + I +KT A + G +++ ++
Sbjct: 405 LADAHMRLSEGQGAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTEEDY 464
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+R F ++G+ FQ+ +DL D D K
Sbjct: 465 SNSMRQFARHVGVAFQILNDLKDWRGDSDNK 495
>gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [marine gamma
proteobacterium HTCC2143]
gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase)(OPP synthetase) [marine gamma
proteobacterium HTCC2143]
Length = 208
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
Q F + KT L A GAI+A Q + +G NLGI FQL DD+LD E
Sbjct: 47 DQYFQVITNKTAVLFAAATAGGAILAQQDQTTVDNYYQYGLNLGIAFQLIDDVLDYEGNA 106
Query: 233 -DLPK 236
D+ K
Sbjct: 107 ADMGK 111
>gi|159470041|ref|XP_001693168.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158277426|gb|EDP03194.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 360
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 62/232 (26%), Gaps = 13/232 (5%)
Query: 17 DTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TECASLFNVNHLTA 72
D +L DD L S + Y + GGK R V +
Sbjct: 30 DELLNDDCLSPAGSPQAQAAQEWFKEVNDYNVPGGKLNRGMAVYDVLASVKGPDGLSEDE 89
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A+ + + + +IA N + I S
Sbjct: 90 VFKANALGWCIEWLQAFFLVADDIMDGSITRRGQPCWYKQPKVGMIACNDYILLECCIYS 149
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMK 184
K + + ++ L H Q G + + ++ + ++
Sbjct: 150 ILKRHFRGHAAYAQLMDLFHETTFQTSHGQLLDLTTAPIGSVDLSKYTEDNYLRIVTYKT 209
Query: 185 TGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G ++A + + +G FQ+ DD LDC D
Sbjct: 210 AYYSFYLPVACGMVLAGITDPAAFDLAKNICVEMGQYFQIQDDYLDCYGDPE 261
>gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776]
gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM
3776]
Length = 634
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 15/200 (7%)
Query: 49 GGKKIRSFLVTECASLFNV---------NHLTALRVGAAIECIHCYSLIHD---DLPSMD 96
GGK++R F+ + + + D
Sbjct: 304 GGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDDIQD 363
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
N R GK T+H QY AI G+ L+ + ++S+ + +L + + ++ + +
Sbjct: 364 NDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAAHMK 423
Query: 157 QGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
G Q + + I +KT A +G MA + E + F
Sbjct: 424 LCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYAEMITQF 483
Query: 214 GENLGIIFQLADDLLDCEED 233
+LG+ FQ+ +DL D D
Sbjct: 484 SRHLGVAFQILNDLSDWLGD 503
>gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
(GGPPSASE) (Geranylgeranyl diphosphate synthase)
[Includes: Dimethylallyltranstransferase;
Geranyltranstransferase; Farnesyltranstransferase]
[Frankia alni ACN14a]
Length = 338
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A L A+E +H +SL+HDDL MD RR +PT
Sbjct: 53 GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LL A +++ + + +L G+Q ++ GQ D+
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL------EVEGDAARRAALILGAGVQDLVRGQAEDLM 164
Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + ++ KTGAL+ + GA++A A + L +G LG FQL D
Sbjct: 165 FESRSDVTVADTLRMEDGKTGALLACSASLGAVLAGAGDEMVDALAEYGSRLGTAFQLID 224
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 225 DLLGIWGDPA 234
>gi|25452945|sp|O24241|FPPS1_PARAR RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 1; AltName:
Full=Dimethylallyltranstransferase 1; AltName:
Full=Farnesyl diphosphate synthase 1; AltName:
Full=Geranyltranstransferase 1
gi|1532050|emb|CAA57892.1| farnesyl diphosphate synthase [Parthenium argentatum]
Length = 342
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 67/242 (27%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S+ + DT+ +L+ A + + Y + GGK R V +
Sbjct: 1 MSSDLKSRFLQVY---DTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVID 57
Query: 61 CASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
L ++ L + MD + RRG+P
Sbjct: 58 SYQLLKGGELTDNEIFLAAALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMI 117
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A G L I+ + + + G + + + E
Sbjct: 118 AANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSK 177
Query: 176 QVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + +M + E ++ +G FQ+ DD LDC
Sbjct: 178 YSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDC 237
Query: 231 EE 232
Sbjct: 238 FG 239
>gi|242091251|ref|XP_002441458.1| hypothetical protein SORBIDRAFT_09g027190 [Sorghum bicolor]
gi|241946743|gb|EES19888.1| hypothetical protein SORBIDRAFT_09g027190 [Sorghum bicolor]
Length = 353
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 65/226 (28%), Gaps = 11/226 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGA 77
++LL A + + + + Y +LGGK R V + L + +
Sbjct: 28 EELLTDPAFEFTEESHQWIDRMVDYTVLGGKCNRGLSVVDSYKLLKGADTLSEEEMFLAC 87
Query: 78 AIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSP 134
+ + + MD + RRG+P A+ G L + I+
Sbjct: 88 TLGWCIEWLQAFFLVLDDIMDESHTRRGQPCWFRVPQVGFIAVNDGIILRNHISRILRRH 147
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALM 189
+ + G L + + E +
Sbjct: 148 FKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSF 207
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + ++ + +G FQ+ DD LDC D
Sbjct: 208 YLPVACALLLSGENLDKYGDVENILVEMGTYFQVQDDYLDCYGDPE 253
>gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 356
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 89/255 (34%), Gaps = 34/255 (13%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
++ ++I + +L + ++ Y + GK++R LV +
Sbjct: 37 IKNELEQISPGIRQMLNSNSEFLEECSKY-------YTIAQGKQMRPSLVLLMSKATSLF 89
Query: 65 FNVNHLTALRVGA--------------------AIECIHCYSLIHDDLPSMDNGYIRRGK 104
++ A + +D+ +RRG
Sbjct: 90 HGIDRSVVGDKYTDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGS 149
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
P+ ++ + +I+AGN +L A +++ + + + ++ L LQ
Sbjct: 150 PSSNVAFGNRRSILAGNFILARASTVMARLRNPQVTELLATVIADLVRGEFLQLKNTMDP 209
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ + + +KT +L+ +C++ I+ S +G +G FQL
Sbjct: 210 SSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLM 269
Query: 225 DDLLDCEE-D--LPK 236
DD+LD D L K
Sbjct: 270 DDVLDYTSKDDTLGK 284
>gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa]
gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 14/207 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALR 74
++ +D L Q + + + + + + L L N A+
Sbjct: 6 VNDEIDAHLKQ---AIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQAMA 62
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+A+ +H +L H+ + S N ++ G+G++ + E+++
Sbjct: 63 AASALRLMHAAALTHEHILSTGNRARIGHSFGS------NIELLTGDGMVPFGLELLAKS 116
Query: 135 K--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
TQ ++++ +T +G QGM GQ Q D + K K G L A
Sbjct: 117 DDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSDYIDH--VCKKKEGELHSCA 174
Query: 193 CESGAIMAHASQNEKERLRCFGENLGI 219
GAI+ ++ E E+LR +G +G+
Sbjct: 175 GAVGAILGGGTEEEIEKLRRYGLYVGL 201
>gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533]
gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533]
Length = 350
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 80/214 (37%), Gaps = 9/214 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
++ ++L+ + + D L GK +R V S N +
Sbjct: 39 AINRIILKHVNTVPGLLGDALKDT---FASPGKMLRPACVMLFGSFGPNGHEKRKELQKI 95
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A ++ +D +R G+P++ +Y + A+ AG+ L + ++S Q
Sbjct: 96 ATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS-ENAQ 154
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
++ + +G Q + I E + K KTG L AC GA
Sbjct: 155 SLHSVIADGKTMQNILVG----ETEQYNNAYKINISEKEYLDQIKGKTGVLFGLACFIGA 210
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + + + FG+ LG FQL DD+LD
Sbjct: 211 YESGLKVTKALKAKKFGDYLGQAFQLRDDILDYT 244
>gi|225462001|ref|XP_002272641.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 10/222 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAAI 79
+LL A + + Y + GGK R V + L + + +
Sbjct: 18 ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVL 77
Query: 80 ECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKT 136
+ + + MDN + RRG+P A G L I+ +
Sbjct: 78 GWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVILRNQIPRILKNHFK 137
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMCF 191
+ + + G + + I+ E + +
Sbjct: 138 GKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYL 197
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+MA + + ++ +GI FQ+ DD LDC D
Sbjct: 198 PVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239
>gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
Length = 289
Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 67/222 (30%), Gaps = 18/222 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
+ + I+ +D LL + + ++L GK++R + A L
Sbjct: 8 KEMRAINEGIDQLLA-------GVELPEIRQGMAHSLKTSGKRLRPLTLLIMAELNGGTV 60
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
AL IECIH SLI DD+ E I Y
Sbjct: 61 EKALNAALGIECIHTASLIQDDILDEGLKRRGELTSH------EKFGIFIATVSADYLIS 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ + + DE + KT
Sbjct: 115 RAVMLYSGYDAKSIEAFGRMGLELAEGEVLDIKTRRSKTDEAYYLEC----VRRKTATAF 170
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
E GA +A S ++ E R GE GI +Q+ DDL++
Sbjct: 171 ASCFEIGARIAGVSDDKAELCRKMGEEFGIAYQIVDDLIEFT 212
>gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
Length = 321
Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + + + ++ ++ + ++ L+ A GGK++R LV
Sbjct: 1 MPHSFHQAVARDFEAVNQLILGQIHSDVGLVEDIGQ-YLIEA------GGKRLRPLLVLL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
++ + A IE IH +L+HDD+ M + +RRG+ T + ++ +++ G
Sbjct: 54 VSNALQYQGDKHHDLAAIIEFIHSATLLHDDVVDMSD--LRRGRLTANAKWGNAPSVLVG 111
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + AF+++ + I S ++ Q + + + + + +
Sbjct: 112 DFLYSRAFQMMVAVGDMSIMKILSDTTNLISEGEVQQLINAKKPDISEKGYFE------V 165
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
KT L ACE+ A ++ A + + +L +G ++GI FQL DD LD +L K
Sbjct: 166 IHKKTAILFEAACETAATLSGAEETLRRQLTAYGYHVGIAFQLIDDALDYTGNTEELGK 224
>gi|225868943|ref|YP_002744891.1| geranyltranstransferase [Streptococcus equi subsp. zooepidemicus]
gi|225702219|emb|CAW99956.1| putative geranyltranstransferase [Streptococcus equi subsp.
zooepidemicus]
Length = 289
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 10/231 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
+ RID + + Q+ + L AI Y++ GG K L+
Sbjct: 2 DKLTRIDATIHQYYDR-----QSTVSADLEEAILYSVDGGGKRLRPLILLELLEGFGLAL 56
Query: 70 -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ AAIE IH SLIHDDLP+MDN RRG+ T H Q+DE TAI+AG+ L F
Sbjct: 57 TDAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPF 116
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+ ++ SL + + + +D ++ I KTG L
Sbjct: 117 ALIAGADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLDIQELSDIHANKTGKL 176
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ + I+A S + L G +G FQ+ DD+LD +L K
Sbjct: 177 LTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGK 227
>gi|115461042|ref|NP_001054121.1| Os04g0657100 [Oryza sativa Japonica Group]
gi|113565692|dbj|BAF16035.1| Os04g0657100 [Oryza sativa Japonica Group]
gi|215704288|dbj|BAG93128.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629693|gb|EEE61825.1| hypothetical protein OsJ_16465 [Oryza sativa Japonica Group]
Length = 392
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 66/224 (29%), Gaps = 11/224 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGA 77
DDL+ + + + L I Y + GGK R V + + +
Sbjct: 67 DDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLAC 126
Query: 78 AIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+ + L + + R + EV +G++ +I K
Sbjct: 127 VLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHILIMIKKY 186
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-------KMKTGALM 189
+ ++ + + L D+ + I+
Sbjct: 187 FREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSF 246
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +++ A + L+ +GI FQ+ DD LDC D
Sbjct: 247 YLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFAD 290
>gi|254444809|ref|ZP_05058285.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198259117|gb|EDY83425.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 305
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 5/231 (2%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+ N K+ + + L + + + L A +AL G R+ + + ++
Sbjct: 1 MNVNRKKPEAFTKESLKRYVN-LPDGLESTLFEAASHALEAEGSFSRANIAIGAGEILDM 59
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +GA+IE H SLI DDLP MD+ +RR K H Y E AI+A G + A
Sbjct: 60 DTSRAEAIGASIELFHLASLILDDLPCMDDASMRRSKECAHSVYGEGAAILAALGFINRA 119
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
+ ++ +++ + + + +G G+L GQ DI E +V I KT
Sbjct: 120 YSLLWDLFSEVGKEQQLEAADLVNDCLGFSGILDGQSRDIHFEDSAGLGAEVRQIASQKT 179
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLP 235
G+L+ AI++ AS+ +K L + GI +Q+ADDL D D
Sbjct: 180 GSLIRLCLLLPAILSSASRYDKMHLTRLAQYWGIAYQVADDLKDIYLGDAA 230
>gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 321
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L + E GAI+ A+ + + LR FG +LG+ FQ+ DD+LD
Sbjct: 162 IFGKTASLFAGSAEMGAILGEANDEQIDALRRFGGHLGMAFQIVDDVLDL 211
>gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
rochei]
gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
rochei]
Length = 439
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 70/242 (28%), Gaps = 21/242 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+D L + L + + D R+ L GGK+ R+ L +
Sbjct: 72 LDEALAERLRRARTADPLFARDVAERMTRFTLEGGKRTRAQLAWWASRACAGRDAAVAAA 131
Query: 76 GAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIA----GNGLLTYAFE 129
I MD +RRG+PT+H + A
Sbjct: 132 ALQIGAALELLQTCALVHDDVMDRATLRRGRPTLHTELASGHEDRVGPERARRFGQSAAV 191
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ D++ ++ L++ + ++ + ++ + +
Sbjct: 192 LAGDLALAWADDLVAETPLAVWKAVVVRRLWSDMRTEMVAGQYLDLHGQATAARSLARAL 251
Query: 190 CFACESGAIMA------------HASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
AC A+ + A RL G G+ FQL DDL D D
Sbjct: 252 RAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDDLDDVFGDPLET 311
Query: 235 PK 236
K
Sbjct: 312 GK 313
>gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 455
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 47/268 (17%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
+ + + + L + + H +A Y GK +R +V A +
Sbjct: 86 DPLRTVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHMRPLIVLLMARATALCPK 145
Query: 71 TALRVGAAIECIHC---------------------------------------------- 84
A
Sbjct: 146 GPRLHSAQPMGGVDTAISPPNILVDVNPSSPLTSPAVEPTEVDSDILPSQRRLAEITELI 205
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
++ +D+ RRG P+ ++++ A++AG+ LL A ++ + + +
Sbjct: 206 HTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNAEVIELLA 265
Query: 145 -QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ + +KT +L+ +C + AI+ +
Sbjct: 266 TVIANLVEGEFMQLKNTERDERRPVWSEDALAYYLQKTYLKTASLISKSCRASAILGGSD 325
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
E +G+NLG+ FQL DD+LD
Sbjct: 326 AASVEAAYAYGKNLGLAFQLVDDMLDYT 353
>gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
Agy99]
gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
Agy99]
gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
Length = 335
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 73/221 (33%), Gaps = 15/221 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ + +++ I+ ++D L M + L GGK+ R
Sbjct: 15 DAEFATTVRDGVASIERLMDAELRGADEVMTDSL-------LHLFLAGGKRFRPLFTVLS 67
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A + N V A + MD +RRG P+ + ++ AI+AG+
Sbjct: 68 AQV-GPNPGADEVVIAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANARWGNNVAILAGD 126
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
++++ + + + L + + Q +
Sbjct: 127 -------YLLATASRLVSRLGPDAVRIVADTFAQLVTGQMRETRGAPEGVDMIEQYLKVV 179
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
KTG L+ A G + + A + ERL G +G FQ
Sbjct: 180 HEKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVGTAFQ 220
>gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
Length = 385
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 81/269 (30%), Gaps = 54/269 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL---------------- 64
L + + L + +Y GK +R LV +
Sbjct: 23 KFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALTPRSSRGGMGIGS 82
Query: 65 -------------------FNVNHLTALRVGAAIECI--------------HCYSLIHDD 91
N E ++
Sbjct: 83 QSADISITNPTILADENPDRNPISNIRHDSAYTSEDSDILPSQRRLAEITELIHTASLLH 142
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+D+ RR P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 143 DDVIDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLV 202
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + +K+ +L+ +C + AI+ ++ + E
Sbjct: 203 EGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLISKSCRAAAILGGSTPDVVEAA 262
Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
+G+NLG+ FQL DD+LD +L K
Sbjct: 263 YLYGKNLGLAFQLVDDMLDYTVSEAELGK 291
>gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans]
Length = 941
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 85/267 (31%), Gaps = 52/267 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN-------------- 66
L + + L + +Y GK +R LV +
Sbjct: 97 KFLTGNIRQLLGSGHPTLDTVAKYYTQSEGKYVRPMLVLLMSRATALTPRGPSSRAGRIP 156
Query: 67 ------------VNHLTALRVGAAIECIHCYSLIHD---------------------DLP 93
+ A + + + D
Sbjct: 157 SVDASISHPTILADENPARPCSSVRDDAAYTTADSDILPSQRRLAEITELIHTASLLHDD 216
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
+D+ RR P+ +I++ A++AG+ LL A ++ + + + + +
Sbjct: 217 VIDHSVSRRSAPSANIEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANLVEG 276
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ Q + +K+ +L+ +C + AI+ +S + E
Sbjct: 277 EFMQLKNTARDETNPQWTEETVSYYLQKTYLKSASLISKSCRAAAILGGSSDDVVEASYL 336
Query: 213 FGENLGIIFQLADDLLDCE---EDLPK 236
+G+NLG+ FQL DD+LD E+L K
Sbjct: 337 YGKNLGLAFQLVDDMLDYTVSGEELGK 363
>gi|242054143|ref|XP_002456217.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor]
gi|241928192|gb|EES01337.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor]
Length = 356
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 66/226 (29%), Gaps = 11/226 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGA 77
+++L A + + + Y +LGGK R V + + +
Sbjct: 31 EEMLQDPAFEFTDESLQWIDRMVDYNVLGGKCNRGLSVIDSYKILKGVDVLSKEETFLAC 90
Query: 78 AIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP 134
+ + + + MDN RRG+P A+ G L + I+
Sbjct: 91 TLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRH 150
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALM 189
+ + + G L + + E + +
Sbjct: 151 FKGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSF 210
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++A + + ++ +G FQ+ DD LDC D
Sbjct: 211 YLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDPE 256
>gi|15236002|ref|NP_193452.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
dimethylallyltranstransferase/ geranyltranstransferase
[Arabidopsis thaliana]
gi|13431525|sp|Q43315|FPPS2_ARATH RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 2; AltName:
Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Geranyltranstransferase 2
gi|1146161|gb|AAB07247.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
gi|1146163|gb|AAB07248.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
gi|2245078|emb|CAB10500.1| dl4630c [Arabidopsis thaliana]
gi|7268470|emb|CAB80990.1| AT4g17190 [Arabidopsis thaliana]
gi|18176350|gb|AAL60028.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
thaliana]
gi|21436457|gb|AAM51429.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
thaliana]
gi|332658460|gb|AEE83860.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 342
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/247 (19%), Positives = 83/247 (33%), Gaps = 19/247 (7%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ L+ + ++L DLL + + L + Y + GGK R V + L
Sbjct: 2 ADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ +G IE + Y L+ DD+ MDN RRG+P + AI
Sbjct: 62 KQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRKPKVGMIAI 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ ++ + + + G + + E
Sbjct: 120 NDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +MA + ++ ++GI FQ+ DD LDC
Sbjct: 180 LQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFA 239
Query: 233 D---LPK 236
D L K
Sbjct: 240 DPETLGK 246
>gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1]
gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
Length = 291
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 13/231 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
E SKRI++ L+ A +L A+R+A+ GG ++R L A+ +H
Sbjct: 2 EPSKRIESALE---AAVARATAAPAPPQLAHAVRHAVFAGGARVRPRLCLTVAAACGDDH 58
Query: 70 LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A AIE +HC SL+HDDLP D+ RRG+P+VH Y E A++AG+ L+ +A
Sbjct: 59 PELADAAATAIELMHCASLVHDDLPCFDDAATRRGQPSVHAAYGERLAVLAGDALIVHAL 118
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
E ++ Q + L G+ GQ + + E A
Sbjct: 119 ETLALTVPQAPQRAGALLTTVTRATGMPYGITAGQAWESEPEIPVAEYHQAKTGSLFAAA 178
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+ ++++ +R R GE LG +Q+ADDL D +L K
Sbjct: 179 TVAGAIA-----AGAEDQADRWRIVGERLGEAYQVADDLRDAVGAEDELGK 224
>gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
Length = 348
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 88/254 (34%), Gaps = 23/254 (9%)
Query: 6 PSKLQENSKRIDTIL----------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
S L + K I+ I D L T + ++ N AI GGK+IR
Sbjct: 4 KSFLDKIEKNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPAIEIINRGGKRIRP 63
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEV 114
L+ A N+ + + + +++G RRGKP++H+ Y
Sbjct: 64 MLMILLAHALGYNNSDTENLYKISMLLELPHSGSLIIDDIEDGALKRRGKPSIHLIYGLD 123
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+I N + ++I + + + T + G L
Sbjct: 124 NSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLSNLHLGQGIDITLHNGTYIPSI 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---- 230
+ + + KT +L A I+ + ++N+ + L N+G FQ+ DD+ +
Sbjct: 184 EEYISLVEHKTSSLFGMAGFLAGILTN-NENKAKNLYNTFLNIGTYFQMIDDIKNIKDGV 242
Query: 231 ----EED---LPKK 237
D KK
Sbjct: 243 KGKDFGDDLIEGKK 256
>gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
Length = 292
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+D+ RR P+ +I++ A++AG+ LL A ++ + + + +
Sbjct: 49 HDDVIDHSISRRSAPSANIEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 108
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +K+ +L+ +C + AI+ ++ E
Sbjct: 109 VEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLISKSCRAAAILGGSTPEVVEA 168
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G+NLG+ FQL DD+LD E+L K
Sbjct: 169 AYLYGKNLGLAFQLVDDMLDYTVSGEELGK 198
>gi|134101792|ref|YP_001107453.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133914415|emb|CAM04528.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 249
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTG L+ +C G + A A + + LR FG +G+ FQL DDLL D
Sbjct: 91 CVAMARAKTGELLGTSCALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGDPA 149
>gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021]
gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21]
Length = 163
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
G +LQ+ RI+ L+ SH N LL A++YALL GGK++R FLV
Sbjct: 2 GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ T AAIE IH YSLIHDDLP+MD+ +RRG PT HIQ+DE TAI+AG+
Sbjct: 57 GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
L ++AFEI++ + + +
Sbjct: 117 ALQSFAFEILTKTPNISAEQKTGFNSNFSARRWCARNVFR 156
>gi|6681694|dbj|BAA88844.1| Farnesyl pyrophosphate synthase [Gentiana lutea]
gi|193795398|gb|ACF21779.1| farnesyl pyrophosphate synthase [Gentiana lutea]
Length = 349
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 14/244 (5%)
Query: 6 PSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS- 63
S L+ ++ ++L +LL A + + Y + GGK R V +
Sbjct: 8 TSDLRTTFLQVYSVLKSELLNDLAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSYEQ 67
Query: 64 ------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L A +G IE + Y L+ DD+ + + + + A+
Sbjct: 68 LKEGKELTKDEVFLASALGWCIEWLQAYFLVLDDIMDGSHTRRSQPCW-FRLPKVGMIAV 126
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ + + + + G + + ++ E
Sbjct: 127 NDGVLLRNHIPRILKKHFREKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYS 186
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + +MA + + ++ ++GI FQ+ DD LDC
Sbjct: 187 LSLHRRIVQYKTAYYSFYLPVACALLMAGENLDNYVDVKNVLIDMGIYFQVQDDYLDCFG 246
Query: 233 DLPK 236
+ K
Sbjct: 247 EPEK 250
>gi|160893233|ref|ZP_02074021.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
gi|156865316|gb|EDO58747.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
Length = 127
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ Q+ + + KTGAL+ + GA++A A+++E +++ ++G+ FQ+ DDLLD
Sbjct: 1 MSGDQLHFVYENKTGALIEASMMIGAVLAGATEDELKQVEMIASDIGLAFQIQDDLLDIL 60
Query: 232 EDLP 235
D
Sbjct: 61 GDSA 64
>gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 289
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 13/207 (6%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L+ ++M+ D L+ ++ GGK+IR ++ L A
Sbjct: 37 LMEALRNNMENPFADPLIEFMK----GGKRIRPAILFLINEACGGGGSPELAAAAVEL-- 90
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D+ RRG P+ HI++ AI+ + +L+ EI+S + + +
Sbjct: 91 -IHTASLIHDDIIDDSDSRRGIPSFHIKHGTEMAILIADFILSIVLEIVSKYEDKRIGRL 149
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S+ ++ ++ +L + I + K KT +L A GA++A
Sbjct: 150 LSEATKLMSIGEMMEVILLRRGDP-----ISVEDYLNVLKYKTASLFQTASSLGALIAGR 204
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
E + +G LG+ +Q+ DDLLD
Sbjct: 205 DD-LYEEMGLYGLYLGLSYQIRDDLLD 230
>gi|322796005|gb|EFZ18629.1| hypothetical protein SINV_08110 [Solenopsis invicta]
Length = 338
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 14/239 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL----- 64
+ K++ T+ D++ + + N+++ + Y +LGGK+ R+ ++ L
Sbjct: 1 ENEKKQMMTVWPDIVGELTNAEHAVINNKMKKILEYNVLGGKQFRALILIYAYQLVTNKF 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N V +E +++ DDL E+ AI L
Sbjct: 61 TKENMRLVRIVAWCMELTQAAAIMIDDLQDQSLFRRGNPCW-YRCDQIELAAITDALKLK 119
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F +I + + T + + G + L ++F +
Sbjct: 120 HSIFYLIKKHCKGKECYVDLMETFEETSSKTVDGQILDLQLSTNVNKKPNLELFTMDTYN 179
Query: 185 T-------GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +A + + +G +FQ+ DD LDC D
Sbjct: 180 CIVRNKTSYYSVVLPITIAMHLAGIKDRESFMQAESISLEIGRLFQIQDDFLDCFGDSE 238
>gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III
euryarchaeote SAT1000-53-B3]
Length = 325
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 21/230 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ L +E + + + + + + GK++R L
Sbjct: 13 ISENLNDYYKEVRAEFQRHMKREISKESKDLAPLIEKGVGD--------GKQLRPVLCRL 64
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + A G A+E IHC +LIHDD D + + +
Sbjct: 65 VSDSLGGDAHLAFECGMALELIHCGTLIHDDWLDGD---------KFRREAPALWKELGP 115
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ A +I++ ++ + L+ +G +
Sbjct: 116 RTAVLVADLMIATGSLHGAISLATGKSLARCARNLTEGAIADFTDKENYSESVYLHR--- 172
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
K KTGAL A E GA+++ + + FGE +GII+Q+ DD LD
Sbjct: 173 IKKKTGALYSTAAELGALISPRTD-LALPMHKFGETVGIIYQITDDYLDL 221
>gi|225872538|ref|YP_002753993.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
gi|225793159|gb|ACO33249.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
Length = 307
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 14/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
M +P+ + + L +++ + RL A++ L G IR+ L
Sbjct: 1 MTVAVPASIALRLRD--------LYRSSCSPKADTESRLAGALQEVLQHPGNMIRAELAF 52
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+++ + + A+E H SL+ DDLP MD+ +RRG +H Y E AI+
Sbjct: 53 RLGRSYDLPGACSEHLAIAVEYFHTASLLFDDLPCMDDATLRRGAACIHHTYGEGAAILT 112
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
L+ +A+ ++ R++ + + H +GL G+L GQ D+
Sbjct: 113 ALALVNHAYGLLWKGVAHSSAEARTRTLEYVEHQLGLAGLLNGQSRDLHMREASRQPRIY 172
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
I KT +L+ A AI A + E+ L G+ +Q+ DDL D +D
Sbjct: 173 QQIAIGKTVSLIRMALVVPAIAGGAGEYEQCLLDRLAIAWGLSYQILDDLKDVLHTAKDS 232
Query: 235 PK 236
K
Sbjct: 233 GK 234
>gi|156383848|ref|XP_001633044.1| predicted protein [Nematostella vectensis]
gi|156220109|gb|EDO40981.1| predicted protein [Nematostella vectensis]
Length = 355
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 11/228 (4%)
Query: 19 ILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---ALR 74
++DL+ + + + + L + Y + GGK+ R V LR
Sbjct: 28 FVNDLVQEEENDLAIGDSIKWLREVLEYNVPGGKRNRGLSVIGSLRHLIREEHFTDEHLR 87
Query: 75 VGAAIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDE--VTAIIAGNGLLTYAFEII 131
V + + + + + + R + E AI G + F ++
Sbjct: 88 VALLLGWCVEWFQAFFLVADDIMDQSMTRRGQPCWYRQPEVGNIAINDGIMIEQTVFRLL 147
Query: 132 SSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ ++G L + + + F + +++
Sbjct: 148 KKHIKHQSYYVDVVELFHEVAYLTSLGQSLDLRTKPGENFEGFTLDRYRTIVKHKTAFYS 207
Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD +D D
Sbjct: 208 FYLPVALAMFVAGIKDEASHANAKIILLEMGEFFQIQDDYIDVFGDAS 255
>gi|300431229|gb|ADK12004.1| farnesyl diphosphate synthase [Aralia elata]
Length = 342
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 16/240 (6%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
S L+ + ++L +LL A + + Y + GGK R V + L
Sbjct: 2 SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ + +G IE + Y L+ DD+ MD+ + RRG+P A+
Sbjct: 62 KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGMIAV 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ Q + + + G + + + E
Sbjct: 120 NDGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +M+ + ++ +G FQ+ DD LDC
Sbjct: 180 LPIHRRIVQYKTAYYSFYLPVACALLMSGGDLEKHTNVKDILIEMGTYFQVQDDYLDCFG 239
>gi|116309645|emb|CAH66696.1| OSIGBa0158D24.4 [Oryza sativa Indica Group]
gi|218195739|gb|EEC78166.1| hypothetical protein OsI_17740 [Oryza sativa Indica Group]
Length = 392
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 66/224 (29%), Gaps = 11/224 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGA 77
DDL+ + + + L I Y + GGK R V + + +
Sbjct: 67 DDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLAC 126
Query: 78 AIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+ + L + + R + EV +G++ +I K
Sbjct: 127 VLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHILIMIKKY 186
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-------KMKTGALM 189
+ L+ + + L D+ + I+
Sbjct: 187 FREKPYFLDLLEIWSEIALQTSLGQMLDLIGTHTGADDLAKYSIEGYRRIVKYKTAYYSF 246
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +++ A + L+ +GI FQ+ DD LDC D
Sbjct: 247 YLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFAD 290
>gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
Length = 292
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 8/188 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A++ + A + + + + +D RRG PT++
Sbjct: 13 GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLI-HDDVIDMASTRRGVPTLNA 71
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+D A++ G+ +L+ A + I S+L L+ Q +++ +D
Sbjct: 72 FFDNRVAVLMGDFVLSSALMRAIALNDIRIITIISRLGRELSEGEIRQFETADKVIIDED 131
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
++ + + KT L E GAI A ER++ GE LG FQ+ DD+ D
Sbjct: 132 IYMG------VIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDDIFD 185
Query: 230 CE-EDLPK 236
D+ K
Sbjct: 186 YYRNDVGK 193
>gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 244
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D +RRGK T + + +++ G+ + T AF++++S + + S+ + +
Sbjct: 4 HDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVI 63
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
LQ M ++ ++ + KT L A + I+A + +++ L
Sbjct: 64 AEGEVLQLMNVNDPDITEENYMR------VIYSKTARLFEAAAQCSGILAGCTPEQEKGL 117
Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
+ +G LG FQL DDLLD D L K
Sbjct: 118 QDYGRYLGTAFQLIDDLLDYSADGEHLGK 146
>gi|14488053|gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita]
Length = 349
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 75/228 (32%), Gaps = 15/228 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + Y + GGK R V + L + A
Sbjct: 25 ELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDSYQLLKEGKDLTDDEVFLASA 84
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P AI G L + I+
Sbjct: 85 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFKVPKVGMIAINDGIILRNHIPRILKK 142
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + I+ E + +
Sbjct: 143 HFRSKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYS 202
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+MA + ++ ++GI FQ+ DD LDC + K
Sbjct: 203 FYLPVACALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDCFGEPEK 250
>gi|58699102|ref|ZP_00373935.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534385|gb|EAL58551.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 120
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ I MKT L +CE GAI+ A+ ++ L FG NLG+IFQ DD+ D E+D
Sbjct: 11 FNKIKEIHLMKTAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 70
>gi|260103264|ref|ZP_05753501.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
20075]
gi|260082925|gb|EEW67045.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
20075]
Length = 164
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 34/71 (47%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
GQM + + T K KT AL A E GA A + + L FGENLGI F
Sbjct: 18 GQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAF 77
Query: 222 QLADDLLDCEE 232
Q+ DDLLD
Sbjct: 78 QIVDDLLDYTG 88
>gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
Length = 340
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 80/235 (34%), Gaps = 15/235 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYAL--LGGKKIRSFLVTEC 61
+ L ++ +L + ++T A A+ +GGK +R LV
Sbjct: 11 EAALHRTRDAVEPVLRAAIDTLPGRLRTIAAYHFGWEDAEGAAVDGIGGKLLRPGLVLAA 70
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHD-DLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A+ + V AA + +D RR +PT + AI+AG
Sbjct: 71 AAAVGGEKVADSPVLAAAAAVELAHNFTLLHDDVIDRDQTRRHRPTAWTVFGAENAILAG 130
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ +L A ++ ++ + + + + + +
Sbjct: 131 DAMLALALRLVGGEAASRLAECVIEICDGQYEDCAFEL----------RDDVTLDECLAM 180
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KTGAL+ AC G + A L FG LG+ FQL DDLL D
Sbjct: 181 AGKKTGALLGCACALGGLAVRADPLTVAALDLFGRELGMAFQLTDDLLGIWGDPA 235
>gi|20135548|gb|AAM08927.1| farnesyl pyrophosphate synthase [Malus x domestica]
Length = 342
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA--- 62
+ L+ ++ ++L LL+ + T + + + + Y + GGK R V +
Sbjct: 2 ADLKSKFLKVYSVLKSELLEDPAFDFTNDSRQWVERMLDYNVPGGKLNRGLSVIDSYQLL 61
Query: 63 ----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
L A +G IE + + L+ DD+ MD + RRG+P A+
Sbjct: 62 QQGRELTEDEIFLASALGWCIEWLQAFFLVLDDI--MDGSHTRRGQPCWFRLPKVGMIAV 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ + + + + G + + I+ E
Sbjct: 120 NDGVVLRNHIPRILRKYFREKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + + +M+ + ++ +GI FQ+ DD LDC
Sbjct: 180 LSIHRRIVQYKTAYYSFYLSVACALLMSGEELEKHIDVKNILVEMGIYFQVQDDYLDCFG 239
Query: 233 DLP 235
D
Sbjct: 240 DPE 242
>gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 332
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 9/214 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L ++L++ + + + +AIR GK +R L + L + + V A
Sbjct: 20 LQNVLIEMSESWRIGF-SEIDNAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGAS 78
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + +D +RRG+ ++ + + TA+ AG+ LLT +++
Sbjct: 79 IELLHLATLI-HDDIIDESKLRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLNDADNIQA 137
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + + ++ Q + KT AL + GA
Sbjct: 138 NKLALEALRNILFGELTQK------HNRYLTDTSFDNCLTQITGKTAALFKLSVLFGATS 191
Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ S + + GENLGI FQL DD LD E
Sbjct: 192 SDGVSSQLLDVVGKLGENLGIAFQLLDDYLDFES 225
>gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
Length = 369
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 87/242 (35%), Gaps = 19/242 (7%)
Query: 13 SKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNH 69
++I L+++ Q S + L S I +L GK +R LV F N
Sbjct: 30 RQKISDRLEEIAIQAQRRSAAYSAQTALLWSRISKSLATGKLMRPSLVMLGYRAFGGGNE 89
Query: 70 LTALRVGAAIECIHCYSLIHDDLP---------------SMDNGYIRRGKPTVHIQYDEV 114
A+ +G A E +H LIHDD+ D
Sbjct: 90 ARAIDLGCAFELLHAALLIHDDVVDRDFMRRGKATISALYRDQASASGRSLADAEHAGNS 149
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
IIAG+ L++ A ++ + + G L + +
Sbjct: 150 VGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAFFEAIEQAGAGELEDLLYSLGSAAATT 209
Query: 175 TQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+QV +++MKT ++GA++A A + E + G LG+ +Q+ DD+L D
Sbjct: 210 SQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQAEAIGAVGCQLGVAYQIIDDVLGTFGD 269
Query: 234 LP 235
Sbjct: 270 PA 271
>gi|326490229|dbj|BAJ84778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 14/244 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
G ++ E R+ +++L A + + + Y +LGGK R V +
Sbjct: 15 GDSKAEFAEIYSRLK---EEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSY 71
Query: 63 SLFNVNH---LTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TA 116
+ + + + + MDN RRG+P A
Sbjct: 72 KTLKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIA 131
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ G L + I+ + + + G L + + E
Sbjct: 132 VNDGIILRNHISRILQRHFRGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKY 191
Query: 177 VFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + +++ + + ++ +G FQ+ DD LDC
Sbjct: 192 NLNVHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCF 251
Query: 232 EDLP 235
D
Sbjct: 252 GDPE 255
>gi|285013665|gb|ADC32809.1| farnesyl pyrophosphate synthase [Medicago sativa]
Length = 342
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 71/227 (31%), Gaps = 15/227 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + Y + GGK R V + L + A
Sbjct: 18 ELLHDPAFEWSEDSRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P A G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILRK 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + ++ E + +
Sbjct: 136 HFKGKPYYVELLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MA + ++ +G FQ+ DD LDC D
Sbjct: 196 FYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPE 242
>gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 447
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 76/269 (28%), Gaps = 54/269 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + + L +Y GK +R LV + ++
Sbjct: 85 KFLTKNIRQLLGSGHPALDKVAKYYTHSEGKHMRPMLVLLMSQATALDPRKHHSYTDKPS 144
Query: 81 -------------------------------------------------CIHCYSLIHDD 91
++
Sbjct: 145 PVDSSFSAPSILEDANPEMNPLVAPNADSKYDIAGDDYILPSQRRLAEITELIHTASLLH 204
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+DN RR + ++ + A++AG+ +L A ++ + + + + +
Sbjct: 205 DDVIDNAVTRRANSSANLAFGNKMAVLAGDFMLGRASVALARLRDPEVTELMATVIANLV 264
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ +KT +L+ +C S A++ ++ E
Sbjct: 265 EGEFMQLKNTAQDESKPVYTDETLSYYLQKTYLKTASLISKSCRSAAVLGRSAPEVIEAS 324
Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD ++ K
Sbjct: 325 YAYGRNLGLAFQLVDDMLDYTVTEAEMGK 353
>gi|195624442|gb|ACG34051.1| farnesyl pyrophosphate synthetase [Zea mays]
Length = 355
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 69/224 (30%), Gaps = 11/224 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGA 77
+++L A + + + Y +LGGK R V + + +
Sbjct: 30 EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSYRILKGVDVLSKEETFLAC 89
Query: 78 AIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP 134
+ + + + MDN RRG+P A+ G L + I+
Sbjct: 90 TLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRH 149
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGALM 189
+ + + G + + + ++ + ++Q
Sbjct: 150 FKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNLTVRRHIVQYKTAYYSF 209
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++A + + ++ +G FQ+ DD LDC D
Sbjct: 210 YLPVACALLLAGENLDNFGDVKNILVEMGTYFQVQDDYLDCFGD 253
>gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase,
mitochondrial; Short=HPS; Flags: Precursor
gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
Length = 449
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 81/256 (31%), Gaps = 46/256 (17%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + L A +Y GK +R +V + + R + ++
Sbjct: 92 KFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALCPKAPQRQQSTLQ 151
Query: 81 CIH--------------------------------------------CYSLIHDDLPSMD 96
++ +D
Sbjct: 152 ASAAIDTSISPLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELIHTASLLHDDVID 211
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIG 155
+ RRG P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 212 HSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIANLVEGEFM 271
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ + T +KT +L+ +C + A++ A + +G+
Sbjct: 272 QLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYGK 331
Query: 216 NLGIIFQLADDLLDCE 231
NLG+ FQL DD+LD
Sbjct: 332 NLGLAFQLVDDMLDYT 347
>gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
Length = 382
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 85/258 (32%), Gaps = 29/258 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
++ + L++ + + L L GGK IR L F
Sbjct: 27 AEWSAFRAAVTRELEEFFAAPTHRVPRSPGFPVLWERTAQQLAGGKLIRPRLTLIAWRSF 86
Query: 66 ---------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT---------- 106
+V +R+ A+ E +H L+HDD+ D R
Sbjct: 87 TAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDVVDRDWRRRGRPTVGELFRRDAAAA 146
Query: 107 -----VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
E AI+AG+ LL A + S+ + ++ G L
Sbjct: 147 GAPAHEAEHAGESAAILAGDLLLAGALRLASTCTGDPATSRAVADVVFEAVTASAAGELD 206
Query: 162 GQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCFGENL 217
+L + + V I M+ +G+++A AS E E+L G L
Sbjct: 207 DLLLSLHRFGAEHPGVQDILDMERLKTATYSFEAPLRAGSLLAGASAEESEQLAHAGALL 266
Query: 218 GIIFQLADDLLDCEEDLP 235
G+ +Q+ DD+L D
Sbjct: 267 GVGYQVVDDVLGTFGDPA 284
>gi|239582554|dbj|BAB61886.2| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
Length = 147
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MDN +RRG+PT+H YD+ TAI+AG+ LLT+AF+I++ + +R L
Sbjct: 1 HDDLPGMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHKDPTVRLLLTR 60
Query: 149 SLTHNIGLQGMLGGQM----LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
L GL GM+GGQM + + + V +Q+MKTGAL+ + C +GAI+ A+
Sbjct: 61 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQANA 120
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
++ L +G LG FQ+ADD+LB E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILBVE 147
>gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 321
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 16/226 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + E + ++ +L D + ++ ++ L GK+IR+ L +L
Sbjct: 7 LNASFSEKLRSVEEVLHDSMTTFTKLKSIEYAKKM-------LSSGKRIRALLSLLSFAL 59
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
A AA + + + +D IRRGKP + + +++ G+ LL
Sbjct: 60 CKNADTNAEIRAAATIELIHNATLM-HDDVVDENSIRRGKPNIKSIHGNKISVLTGDFLL 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AFEII K + S+ L+ LQ G+++ ++ + K
Sbjct: 119 SVAFEIILECKNLSVVLLLSKTAKQLSEGEMLQLQSIGEIVSE-------SEYLEVIARK 171
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T L A E AI+ Q LR G +G+ FQ+ DD+LD
Sbjct: 172 TAVLFSAAAEIAAILTGK-QEYVVILREIGFLIGMAFQITDDVLDY 216
>gi|291397823|ref|XP_002715374.1| PREDICTED: farnesyl diphosphate synthase [Oryctolagus cuniculus]
Length = 937
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 73/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q+ + I+ L + H +T RL + Y +GGK R
Sbjct: 68 MNGDQKPDAYAQEKQDFIQHFSQIVRVLTEEEMGHPETGDAIARLKEVLEYNAIGGKYNR 127
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+P +
Sbjct: 128 GLTVLVAFRELVEPRKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQPCWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ A+ L + ++ + + Q L + Q
Sbjct: 188 KPGIGLDAVNDALLLEACIYRLLKFYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E + +G FQ
Sbjct: 248 GSVDLSRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 307
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 308 IQDDYLDLFGDPSVTGK 324
>gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec]
gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
Length = 338
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 76/239 (31%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLG--GKKIRSF 56
M +P ++ L + + ++ + A + G GK +R
Sbjct: 1 MTTTVPEAIERGRALAVPALRATVDRLHPRLRHVVAYHRGWVDAAGEPVPGNGGKLVRPA 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A L A+E +H +SL+HDDL + R + +
Sbjct: 61 LALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLM-DGDRERRHRATAWTVFGADGAI 119
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ L ++ + G L + +
Sbjct: 120 LAGDALLGLATQVLLEVEGEPGRRAAVILGAGVQDLVRGQAEDLLFESRSDVSV----AE 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ + GA++A A + L +G LG FQL DDLL D
Sbjct: 176 TLHMEDGKTGALLACSASLGAVLAGAPDEVVDGLAEYGSRLGTAFQLIDDLLGIWGDPA 234
>gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 332
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 9/214 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L ++L++ + + + +AIR GK +R L + L + + V A
Sbjct: 20 LQNVLIEMSESWRIGF-SEIDNAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGAS 78
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + +D +RRG+ ++ + + TA+ AG+ LLT +++
Sbjct: 79 IELLHLATLI-HDDIIDESKLRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLNDADNIQA 137
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + + ++ Q + KT AL + GA
Sbjct: 138 NKLALESLRNILFGELTQK------HNRYLTDTSFDNYLTQITGKTAALFKLSVLFGATS 191
Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ S + + GENLGI FQL DD LD E
Sbjct: 192 SDGVSSQLLDVVGKLGENLGIAFQLLDDYLDFES 225
>gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
Length = 346
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 6/229 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S +E R+D L+ + S + +Q + + I+ GK+IR LV
Sbjct: 17 DFFSYWKETRTRLDQELNCQIPVLFSALGSQQIETIQQIIK----NGKRIRGCLVFLMNQ 72
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
AL AIECI SLIHDD +D IRR +P A++ G+ +
Sbjct: 73 TQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRKRPATWTVEGPRRAVLLGDIM 130
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A + ++ + + + +++ I +
Sbjct: 131 FATAIQSMAELSKDDGATVARAIATVANGAYQELFWQTKTRERRLHKLLEKNLYDHIIYL 190
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGAL AC+ GAI A A + FG G +Q+ADDL D
Sbjct: 191 KTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFIA 239
>gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 374
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 72/235 (30%), Gaps = 14/235 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
ID + + + + A ++ D L + + GK +RS
Sbjct: 33 RRAAIDAVTEFVTDRCADDLRLTGVDVTLDVLSDFVSDGKCLRSTFAYLGWLAGAAPDDA 92
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDN----------GYIRRGKPTVHIQYDEVTAIIAGN 121
ALR A+ + +H ++L+ DD+ + + + E A
Sbjct: 93 ALRAAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASAAV 152
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
L + R+ ++ + GQ D+ ++ + +
Sbjct: 153 LLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGRPTLEDVL 212
Query: 181 ---QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + E G +A L +G +G FQL DDLL
Sbjct: 213 DVARRKSGNYTVRRPLEIGGALAGCPDATLGLLGRYGAAVGEAFQLRDDLLGIFG 267
>gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
Length = 342
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 70/238 (29%), Gaps = 18/238 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTA 72
+D L D L M + + AI + L GGK++R A
Sbjct: 1 MDQALSDFLAGRRLWMTDLDDALVPVAEAIEAFVLGGGKRLRPAFAYWGYRGAGGVDTDA 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG---------------KPTVHIQYDEVTAI 117
+ A S + D + R + + AI
Sbjct: 61 VVTALAALEFVQASALIHDDLMDRSDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAAI 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ G+ L ++ E++ S + R++ G + + E
Sbjct: 121 LLGDLCLVWSDELLHSAGLDPRTVARARPDFDEMRTEVTVGQYLDVVTQATGDASLERAS 180
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + GA +A A + + +G LG FQL DD+L D
Sbjct: 181 KIARYKSAKYTVERPLLLGAALADAPADIRVAYSAYGLPLGEAFQLRDDVLGVFGDPA 238
>gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
DSM 43017]
Length = 335
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 94/236 (39%), Gaps = 12/236 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL----GGKKIRSF 56
M LPS++ + + L + + M+ + + + GGK +R
Sbjct: 1 MTAILPSEVSATQQLVQPALREAVTTLTPAMRRIVSYHFGWTDEHGEVVNGGGGKALRPA 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A +AL A+E +H +SL+HDD+ MD RR +PT + A
Sbjct: 61 LALLAARAVGAPPESALPGAVAVELVHNFSLLHDDV--MDGDTERRHRPTAWRLFGTPAA 118
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ LLT A E++ RS L + + +
Sbjct: 119 ILAGDALLTLAMEVL------DSVGERSANQRLAAAVHRLIEGQSADIEYESRTIVSVEE 172
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ KT +LM + E GA++ A L FG NLG+ FQL DDLL
Sbjct: 173 CLDMEDGKTASLMACSAELGALLGGADDRTVAALGDFGRNLGMGFQLVDDLLGILG 228
>gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 359
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 31/243 (12%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF------- 65
+ + + S + +N+ L A +YAL GGK +R LV A
Sbjct: 29 ALVHREITAVREHIQSLVANTNNEVLDHAGKYALAAGGKLMRPALVALMAHAMLPLDVSA 88
Query: 66 -----------NVNHLTALRVGAAIECIH-CYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
V T L E ++ +D+ +RRG+P +H YD
Sbjct: 89 RLLEEPIGSLDEVTPGTILPFLRLAEVTELIHTASLVHDDVIDSSDMRRGRPALHKVYDT 148
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A++AG+ +L A I+ Q+ + L L D D
Sbjct: 149 KRAVLAGDYILARASFYIA----------TLQVPRIVILMTTALEELMSGELLQMDGCFD 198
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ KT +L+ + S A++ ++ ++ FG +LGI FQ+ DD LD
Sbjct: 199 IPRYEQKSFCKTASLISNSLASTAVLVDPGNEALEQTAFDFGRHLGIAFQILDDCLDITG 258
Query: 233 DLP 235
D
Sbjct: 259 DEK 261
>gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
ATCC 33806]
gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
ATCC 33806]
Length = 368
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 72/261 (27%), Gaps = 28/261 (10%)
Query: 1 MNGGLPS-KLQENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLGGKKIR 54
M + L + + T L + + + LL Y L GGK+IR
Sbjct: 1 MTETPKTPDLAQVPGIVTTHLAEFFAAQRPAIAPLGDAVGSAVTLLE--NYVLTGGKRIR 58
Query: 55 SFLVTECASLFNVNHLT----------------ALRVGAAIECIHCYSLIHDDLPSMDNG 98
V + I S P++
Sbjct: 59 PCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDIIDSSDTRRGNPTVHRS 118
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
RR + + + AF + + +
Sbjct: 119 AQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALDRMQPAWRGMRTE 178
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFG 214
++GGQ+LDI E + + Q + + GA +A A LR +G
Sbjct: 179 VIGGQLLDIIHEASGDEDIATAQVVNRFKTAAYTIERPLHLGAALAGADAATIAALRAYG 238
Query: 215 ENLGIIFQLADDLLDCEEDLP 235
++G+ FQL DD L D
Sbjct: 239 TDIGVAFQLRDDQLGVFGDPG 259
>gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR5-3]
gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
NOR5-3]
Length = 290
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 12/222 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
+ +L + + A ++ L +A+++A+ GG ++R L A N +
Sbjct: 8 FEQVLRSAVAEAA---DSRCPKLLAAALQHAVFPGGARVRPKLCLAVALANNCDAPALAA 64
Query: 75 VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A ++E +HC SL+HDD+P DN RRG+ +VH + E A++AG+ L+ AF +++
Sbjct: 65 AAAASVELLHCASLVHDDMPCFDNAGERRGRESVHSAFGEPIALLAGDALIVSAFALLAR 124
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
P+ K+ + L + G+ GQ + + A
Sbjct: 125 PQLPAKNRLSQVLRVVAEGVGAPCGIAAGQAWESEPVVDVSLYHRSKTGALFIAATAAGA 184
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + R G +G +Q+ADD+ D L
Sbjct: 185 AAAGV-------DVGPWRTLGAKIGEAYQVADDIQDATSTLE 219
>gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 358
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 75/223 (33%), Gaps = 25/223 (11%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC----YSLIHDDLP 93
LL ++ + GK IR LV L + + A ++ +
Sbjct: 38 ELLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDD 97
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAII-----------------AGNGLLTYAFEIISSPKT 136
+D +RRG+P VH AG+ LLT AF + ++
Sbjct: 98 VIDRDVLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAA 157
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFA 192
+ ++ + G L +L + +E I M+ +
Sbjct: 158 DTARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAP 217
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+GA++A A + + G +LG +Q+ DD+L D
Sbjct: 218 LRAGALLAGADPDLARAMGEAGADLGAAYQVIDDVLGVFGDPG 260
>gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
Length = 309
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 18/224 (8%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ +D L + L + + + S GGK+IR + + ++ A
Sbjct: 4 MESLDERLVEALEGSVELAKKIGEYIIRS-------GGKRIRPRITLAVSKGLGLDENDA 56
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L + +AIE IH SL+HDD+ +D RR PTV +++ A+++G+ L A II+
Sbjct: 57 LDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIA 114
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
K + + ++ + + LQ + G + + I KTG L A
Sbjct: 115 KKKAAMV-DYVAKAVEDMVKGEILQEAVRGSVHLDL------DTYYEIIDRKTGKLFGAA 167
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
A L G +G FQ+ DD+LD K
Sbjct: 168 FALPAYYLEKP--YWMELDKAGTLVGRAFQIVDDVLDYFPGTGK 209
>gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3]
gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3]
Length = 338
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A T L A+E +H +SL+HDDL MD RR +PT
Sbjct: 53 GGKLVRPALALLSAQAAGAPAETGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LL A +++ + + G+Q ++ GQ D+
Sbjct: 111 TIFGADGAILAGDALLGLATQVLLEVEGEPGRRAAL------ILGAGVQDLVRGQAEDLM 164
Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E + + ++ KTGAL+ + GA++A A + L +G LG FQL D
Sbjct: 165 FEKRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAGDDMVNALAEYGSRLGTAFQLID 224
Query: 226 DLLDCEED---LPK 236
DLL D K
Sbjct: 225 DLLGIWGDPSVTGK 238
>gi|325192521|emb|CCA26954.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
Length = 346
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 16/247 (6%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
L + + + +L++LL M + I Y GGK R + +C
Sbjct: 4 TSELQAFMAVWEELKQEVLENLLKTYG--MPIDAKKWVQDFIEYNCTGGKLNRGLSLLQC 61
Query: 62 ASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ + + +G IE + L+ DD+ RR ++
Sbjct: 62 SQILFGPEMTAGISRKVCILGWCIEWLQASCLVIDDIMDQSAVRRRRPCW-YRNSKVQMI 120
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI L++ F++I + + G L + D +
Sbjct: 121 AINDSFLLVSIVFQVIRNHFHGEDYYADLIELFRDVIQKTELGQLLDATCQPHERPPDLS 180
Query: 176 QV------FMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQLADDLL 228
+ ++ ++ + +E +++ R + +GI FQ+ DD L
Sbjct: 181 RFTTERYEKIVTYKTAFYTFYMPVACAMLLRGLNDSELDQIARSYCIEIGIYFQIQDDFL 240
Query: 229 DCEEDLP 235
DC D
Sbjct: 241 DCYGDPA 247
>gi|326375390|gb|ADZ57167.1| farnesyl pyrophosphate synthase [Lilium longiflorum]
Length = 351
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 82/245 (33%), Gaps = 18/245 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + +E ++ + +LL A + + Y + GGK R V +
Sbjct: 12 DLKAAFREVYSQLKS---ELLEDPAFDYTEDSRSWIEQMLDYDVPGGKLNRGISVIDSYK 68
Query: 64 L-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-T 115
L N + A +G IE + Y L+ DD+ MDN + RRG+
Sbjct: 69 LLKEVNELSNDDIFLASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQLCWFRLPKVGLI 126
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DE 170
A G L + I+ + + + + G + + + +
Sbjct: 127 AANDGILLRNHIPRILKRHFREKSYYVDLLDLFNEVEFQTASGQMLDLITTHEGEKDLSK 186
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++Q +M+ + ++ ++ +G FQ+ DD LDC
Sbjct: 187 YKMPVYRRIVQYKTAYYSFYLPVACALLMSGENLSKFVAVKDILIEMGTYFQVQDDYLDC 246
Query: 231 EEDLP 235
D
Sbjct: 247 FGDPE 251
>gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
Length = 341
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 6/229 (2%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
S +E R+D L+ + S + +Q + + I+ GK+IR LV
Sbjct: 12 DFFSYWKETRTRLDQELNCQIPVLFSALGSQQIETIQQIIK----NGKRIRGCLVFLMNQ 67
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
AL AIECI SLIHDD +D IRR +P A++ G+ +
Sbjct: 68 TQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRKRPATWTVEGPRRAVLLGDIM 125
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A + ++ + + + +++ I +
Sbjct: 126 FATAIQSMAELSKDDGATVARAIATVANGAYQELFWQTKTRERRLHKLLEKNLYDHIIYL 185
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTGAL AC+ GAI A A + FG G +Q+ADDL D
Sbjct: 186 KTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFIA 234
>gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
Illinois]
gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
Illinois]
Length = 302
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 16/226 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + E + ++ +L D + + ++ L GK+IR+ L +L
Sbjct: 9 LNASFSEKLRSVEEVLYDSMATFTKLRSIEDAKKM-------LSSGKRIRALLSLLSFAL 61
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ AA + + + +D IRRGKP + + +++ G+ LL
Sbjct: 62 CENSDTDVEIRAAATIELIHNATLM-HDDVVDENSIRRGKPNIKSIHGNRISVLTGDFLL 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ AFEII + + S+ L+ LQ G+++ ++ + K
Sbjct: 121 SVAFEIILECENLSVVLLLSKTAKQLSEGEMLQLQSIGEIVSE-------SEYLEVIARK 173
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
T L A E AI+ + LR G +G+ FQ+ DD+LD
Sbjct: 174 TAVLFSAAAEIAAILTGK-KEYVVILREIGFLIGMAFQIIDDVLDY 218
>gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 332
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 10/222 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
+Q+ +K ++ L LL L++A+RYA L GGK+ R+ L +L +
Sbjct: 36 WMQDGAKGVEQALARLLCAED-----DGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
VGAAIE IH +L+HDDLP+MDN +RRG PTVH+++ E TAI+ G+ L +
Sbjct: 91 TPAHVLEDVGAAIEMIHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAH 150
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
AF ++S + I L+ + + L + + ++ ++ + +MK+G
Sbjct: 151 AFLTLASLDAPGDNRIALVRELAQAVSAEGAAGGQAKDLSLVGKHVELDRIVAMHRMKSG 210
Query: 187 ALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLA 224
AL+ + GA+ A A L + G+ Q+
Sbjct: 211 ALVRASVRMGALCAITEDAAHAALYSALDRYSACFGLALQVV 252
>gi|320096193|ref|ZP_08027782.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319976874|gb|EFW08628.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 364
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 62/235 (26%), Gaps = 26/235 (11%)
Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
T TQ L S R GGK+ R L L L V + Y
Sbjct: 27 TRDLAPTQRGAPLASLARSCSEGGKRFRGILAHVGHCLARGGPLDEAPVAPLSAALELYQ 86
Query: 87 LIHDDLPSMDNG-----------------YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ + + R ++ E AI+ G+ L ++A
Sbjct: 87 ASALAHDDIIDHARTRRGRPTPHVSLAALHHDRAWRGDPDRFGEAGAILVGDLLFSWAEA 146
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---------LDIQDEFIDETQVFMI 180
++ +L ++L + + E + ++
Sbjct: 147 AMADQADRLAPRDAARLWARYSRMHAEVALGQFLDVAAEQAPLDPGDPGAMDTEAAMEVV 206
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + GAI A + G+ FQL DD L D
Sbjct: 207 VRKSARYSIVHPAALGAICGGADDALITAIESILTPWGMAFQLRDDHLGVFGDPE 261
>gi|219127608|ref|XP_002184024.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404747|gb|EEC44693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 343
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 57/223 (25%), Gaps = 18/223 (8%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSL 87
+ + D L + Y + GGK R V + + T A + +
Sbjct: 22 VAPEAIDYLRRMMDYNVPGGKLNRGTTVIDVYRVLLGKATLTPTETARAAVLGWAIEFLQ 81
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ + + ++A N + + + +
Sbjct: 82 AFFLVADDVMDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRHFGHEPFYLHL 141
Query: 148 LSLTHNIGLQGM--------------LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
L L ++ + D F +++
Sbjct: 142 LELMLDVTHKTELGQLLDLTSQPPQHHDQPHHVDLDRFTLTRYQQIVKYKTAFYSFYLPV 201
Query: 194 ESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G I++ + + R +G FQ+ DD LDC D
Sbjct: 202 AMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGDPA 244
>gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
Length = 362
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 82/261 (31%), Gaps = 28/261 (10%)
Query: 1 MNGGLPS-KLQENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLGGKKIR 54
M + L + + T L + + + LL Y L GGK+IR
Sbjct: 1 MTETPKTPDLAQVPGIVTTHLAEFFAAQRPAIAPLGDAVGSAVTLLE--NYVLTGGKRIR 58
Query: 55 SFLVTECA------SLFNVNHLTALRVGAAIECIHCYSLIHDDL--------------PS 94
V + LR +A+E I +LIHDD+ S
Sbjct: 59 PCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDIIDSSDTRRGNPTVHRS 118
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ + AI+ G+ +A +++ + R Q
Sbjct: 119 AQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALDRIQPAWRGMRTE 178
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+ G L + + + T + + + GA +A A LR +G
Sbjct: 179 VIGGQLLDIIHEASGDEDIATAQVVNRFKTAAYTIERPLHLGAALAGADAATIAALRAYG 238
Query: 215 ENLGIIFQLADDLLDCEEDLP 235
++G+ FQL DD L D
Sbjct: 239 TDIGVAFQLRDDQLGVFGDPG 259
>gi|62199628|gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera]
Length = 341
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 10/222 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAAI 79
+LL A + + Y + GGK R V + L + + +
Sbjct: 18 ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVL 77
Query: 80 ECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKT 136
+ + + MDN + RRG+P A G L I+ +
Sbjct: 78 GLCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVILRNQIPRILKNHFK 137
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMCF 191
+ + + G + + I+ E + +
Sbjct: 138 GKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFHL 197
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+MA + + ++ +GI FQ+ DD LDC D
Sbjct: 198 PVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239
>gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
Length = 338
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 83/219 (37%), Gaps = 8/219 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
++ + ++ +H+ + L A+ GK +R V + + +
Sbjct: 20 QVQKDMIEISHIILTHVNS-VPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHD 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A ++ +D +R G+P++ +Y + A+ AG+ L + ++S
Sbjct: 79 ELQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
Q ++ + +G Q + + I E + K KTG L A
Sbjct: 139 -ENAQSLHSVIADGKTMQNILVG----ETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLA 193
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
C GA + + + + FGE LG FQL DD+LD
Sbjct: 194 CFIGAYESGIKVTKALKAKKFGEYLGQAFQLRDDILDYT 232
>gi|55710092|gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
Length = 342
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 78/240 (32%), Gaps = 16/240 (6%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
S L+ + ++L DLL A + + Y + GGK R V + L
Sbjct: 2 SDLKTRFLEVYSVLKSDLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ + + +G IE + Y L+ DD+ MD + RRG+P AI
Sbjct: 62 KEGKELSDDEIVLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRIPKVGMIAI 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ Q + + + G + + + E
Sbjct: 120 NDGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +MA + ++ +G FQ+ DD LDC
Sbjct: 180 LPIHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFG 239
>gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f]
gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f]
Length = 338
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 76/239 (31%), Gaps = 9/239 (3%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLG--GKKIRSF 56
M +P ++ L + + ++ + A + G GK +R
Sbjct: 1 MTTTVPEAIERGRALTVPALRATVDRLHPRLRHVVAYHRGWVDAAGDPVPGNGGKLVRPA 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A L A+E +H +SL+HDDL + R + +
Sbjct: 61 LALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDLM-DGDTERRHRATAWTVFGADGAI 119
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ L ++ + G L + +
Sbjct: 120 LAGDALLGLATQVLLEVEGEPGRRAAVILGAGVQDLVRGQAEDLLFESRSDVSV----AE 175
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ KTGAL+ + GA++A A + L +G LG FQL DDLL D
Sbjct: 176 TLHMEDGKTGALLACSASLGAVLAGAPGEVVDGLAEYGSRLGTAFQLIDDLLGIWGDPA 234
>gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans]
Length = 150
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ + GA++ ++E L +GE +G+ FQ+ADDLLD E D
Sbjct: 30 EFLHRHKTGALILSSVRIGALLGQGGESEMRSLDQYGEAVGVAFQIADDLLDVEGDTA 87
>gi|167565893|ref|ZP_02358809.1| polyprenyl synthetase [Burkholderia oklahomensis EO147]
gi|167572980|ref|ZP_02365854.1| polyprenyl synthetase [Burkholderia oklahomensis C6786]
Length = 222
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH +SLI DDLP+MDN R GKP++H +YD TA++A +GL++ AF +S
Sbjct: 1 MIHVFSLIQDDLPAMDNDDTRHGKPSLHTKYDVATALLACDGLISQAFLTLSEIPLPTDG 60
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ L+ + L ++ ++ + +MKTGAL+ + G +
Sbjct: 61 RVALAHELASSIGSSGLTGGQYIDLTSVGTHLNREELERMHRMKTGALIRASVRMGVLCG 120
Query: 201 HA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S + +G LG+ +Q+ DD+LD DL
Sbjct: 121 SGCRTESSAAWNAMGEYGNLLGLAYQVVDDILDSTSDLS 159
>gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 383
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 70/236 (29%), Gaps = 16/236 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
R++ + + M + + L + + GK +RS +
Sbjct: 38 RVRDRVEETVRRRCAEHVHSM--EGAEFLAGVLTDFVGRGKYLRSMFGYLGWRAAAPDSP 95
Query: 71 TA----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG----KPTVHIQYDEVTA 116
A + + SL+ P++ ++ E A
Sbjct: 96 AALDAVAGLELLHAFALLQDDVMDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRFGESGA 155
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ G+ L +A + + R + G + + + +
Sbjct: 156 VLLGDLCLVWAEQAMRESGLPRDALDRGWPRYDAMRSELAVGQFADLLNEARRVPTLDEV 215
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++++ + E GA MA + L +G +G FQ+ DD+L
Sbjct: 216 MDVLRRKSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMRDDVLGVFG 271
>gi|326508604|dbj|BAJ95824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 350
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 79/252 (31%), Gaps = 24/252 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSF------ 56
++ K++ L +L+ + ++ + + Y + GK R
Sbjct: 1 KEEIIAEFKQVFGELKQFVLEDIKSNYEVPEENIKYVERILEYNVPHGKLNRGLAVVDTL 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ + + A +G IE + + LI DD+ MD RRG+P + D
Sbjct: 61 LILNNYQISQEDFKLASVLGWCIEFLQAFFLIADDI--MDASVTRRGQPCWYKWNDVKMT 118
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------QM 164
L+ II + + + G L
Sbjct: 119 ACNDYLLVESQIYIILKKYFNNDLYVPLVELFHQVSYMTELGQLHDLRSLPPNVDKNSSD 178
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQL 223
F ET +++ G I++ +N +++ +G FQ+
Sbjct: 179 EIPFHTFTIETYSLIVKYKTAFYSFYLPLYCGLILSGKLDENIRKQTLDISIAMGEYFQI 238
Query: 224 ADDLLDCEEDLP 235
DD LDC D
Sbjct: 239 QDDYLDCYGDPE 250
>gi|53733369|gb|AAH83515.1| Fdps protein [Danio rerio]
Length = 359
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 59/239 (24%), Gaps = 17/239 (7%)
Query: 14 KRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS---LF 65
+ D + L+ + + + +RL ++Y GGK+ R V
Sbjct: 21 QLFDAEFEKLVCELTEQDFTDPVLSDALNRLREVLQYNAPGGKRNRGLSVIGSLRELVSP 80
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + + + + E + A N
Sbjct: 81 SELPTEEVHRALLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKEAIGLDAINDAFL 140
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQV 177
I + + +L L Q M + F E
Sbjct: 141 LEGSIYRLLRRHCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNRFTMERYK 200
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + MA E + +G FQ+ DD LDC D
Sbjct: 201 AIVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCFGDPA 259
>gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
Length = 324
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 84/219 (38%), Gaps = 8/219 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
++ + ++ +H+ + L A+ GK +R V + + +
Sbjct: 20 QVQKDMIEISHIILTHVNS-VPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHD 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A ++ +D +R G+P++ +Y + A+ AG+ L+ + ++S
Sbjct: 79 ELQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
Q ++ + +G Q + + I E + K KTG L A
Sbjct: 139 -ENAQSLHSVIADGKTMQNILVG----ETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLA 193
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
C GA + + + + FGE LG FQL DD+LD
Sbjct: 194 CFIGAYESGTKVTKALKAKKFGEYLGQAFQLRDDILDYT 232
>gi|15238801|ref|NP_199588.1| FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1);
dimethylallyltranstransferase/ geranyltranstransferase
[Arabidopsis thaliana]
gi|21431776|sp|Q09152|FPPS1_ARATH RecName: Full=Farnesyl pyrophosphate synthase 1, mitochondrial;
Short=FPP synthase 1; Short=FPS 1; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName:
Full=Dimethylallyltranstransferase 1; AltName:
Full=Farnesyl diphosphate synthase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|13878123|gb|AAK44139.1|AF370324_1 putative farnesyl diphosphate synthase precursor [Arabidopsis
thaliana]
gi|1872500|gb|AAB49290.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
gi|7275351|gb|AAF44787.1| farnesyl diphosphate synthase long form [Arabidopsis thaliana]
gi|10177913|dbj|BAB11324.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
gi|17104795|gb|AAL34286.1| putative farnesyl diphosphate synthase precursor [Arabidopsis
thaliana]
gi|332008187|gb|AED95570.1| farnesyl diphosphate synthase 1 [Arabidopsis thaliana]
Length = 384
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 19/252 (7%)
Query: 2 NGGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+ + + L+ + ++L DLL + + + + Y + GGK R V +
Sbjct: 39 SSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVD 98
Query: 61 CASL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
L + +G IE + Y L+ DD+ MDN RRG+P
Sbjct: 99 SFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQV 156
Query: 114 VT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
AI G L + I+ + + + G + + + E
Sbjct: 157 GMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKD 216
Query: 173 DETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
I + +MA + ++ ++GI FQ+ DD
Sbjct: 217 LAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDY 276
Query: 228 LDCEED---LPK 236
LDC D L K
Sbjct: 277 LDCFADPETLGK 288
>gi|157831115|pdb|1FPS|A Chain A, Crystal Structure Of Recombinant Farnesyl Diphosphate
Synthase At 2.6 Angstroms Resolution
Length = 348
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 60/210 (28%), Gaps = 12/210 (5%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
RL ++Y GGK R V +LR A+ +
Sbjct: 39 RLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVAD 98
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ + E + A N + K + +L L
Sbjct: 99 DIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQT 158
Query: 155 GLQ-------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQN 205
Q ++ + + E + I K KT + + A+ + S+
Sbjct: 159 AYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKE 218
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E E + +G FQ+ DD LDC D
Sbjct: 219 EHENAKAILLEMGEYFQIQDDYLDCFGDPA 248
>gi|3915686|sp|P08836|FPPS_CHICK RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
Length = 367
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 60/210 (28%), Gaps = 12/210 (5%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
RL ++Y GGK R V +LR A+ +
Sbjct: 58 RLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVAD 117
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ + E + A N + K + +L L
Sbjct: 118 DIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQT 177
Query: 155 GLQ-------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQN 205
Q ++ + + E + I K KT + + A+ + S+
Sbjct: 178 AYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKE 237
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E E + +G FQ+ DD LDC D
Sbjct: 238 EHENAKAILLEMGEYFQIQDDYLDCFGDPA 267
>gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale]
Length = 112
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ + GAI+ AS ++ ERLR + ++G++FQ+ DD+LD E+L K
Sbjct: 1 VFRGSVVLGAIVGGASDDQIERLRKYARSIGLLFQVVDDILDVTKSSEELGK 52
>gi|255521547|ref|ZP_05388784.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J1-175]
Length = 126
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PK 236
I KTG L+ FA S A +A A + +RLR F EN+GI FQ++DD+LD D K
Sbjct: 8 IHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGK 67
Query: 237 K 237
K
Sbjct: 68 K 68
>gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
Length = 296
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 11/222 (4%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E I+ ++ L ++ L + Y GK IR LV A
Sbjct: 16 EVRSAINKVIQVLEGSFTGLWMP--DNLLNATYHYIRNRGKLIRPTLVLLMAYALGNGSG 73
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ A ++ MD IRRG T +I + + + I
Sbjct: 74 LERAILPAASVELIHTASLLQDDIMDQQRIRRGVKTP-------YSIYGPHTAMLASDLI 126
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
I+ + + ++ L ++ + + + + KT +L+
Sbjct: 127 IAKAVEYAIRSGDNDIVFELLNSSIKLAIGQSFESELSSRANVTIDDYLRLIYYKTASLI 186
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ GA + ++R G +GI FQ+ DD++D
Sbjct: 187 ESSMVVGAYSVNVKDDEVISKIRDVGRFVGIAFQVRDDVIDY 228
>gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 374
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 14/235 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
ID + + + + A ++ D L + + GK +RS
Sbjct: 33 RRAAIDAVTEFVTDRCADDLRLTGVDVTLDVLSDFVGDGKCLRSTFAYLGWLAGAAPDDA 92
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDN----------GYIRRGKPTVHIQYDEVTAIIAGN 121
ALR A+ + +H ++L+ DD+ + + + E A
Sbjct: 93 ALRAAASFDLLHVFALLQDDVMDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASAAV 152
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI- 180
L + R+ ++ + GQ D+ ++ + +
Sbjct: 153 LLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGRPTLEDVL 212
Query: 181 ---QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + E G +A + L +G +G FQL DDLL
Sbjct: 213 DVARRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGAAVGEAFQLRDDLLGIFG 267
>gi|1491641|emb|CAA59170.1| dimethylallyltransferase [Capsicum annuum]
Length = 342
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 68/229 (29%), Gaps = 14/229 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAA 78
+LL + + + Y + GGK R V + SL + + +A
Sbjct: 18 ELLNDPGFEFTDDSREWVDKMLEYNVPGGKLNRGLSVIDSYSLVDDGKELTRDEIFKASA 77
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ + + + + E +IA N + I K
Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWYKVEKVGMIAVNDGILLRNHISRILKNHF 137
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMKTGALMC 190
+ +L L + + Q G + I + ++Q
Sbjct: 138 RPKSYYVDLLDLFNEVEFQTASGQMIDLITTHVGEKDLSKYSLPIHCRIVQYKTAYYSFY 197
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+MA + + ++ +GI FQ+ DD LDC D L K
Sbjct: 198 LPVACALLMAGENLDNHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK 246
>gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
Length = 385
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 9/217 (4%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
L H+ + + L++ +R+ + GG++ R LV L + AA+E H
Sbjct: 40 LALHGHVADRLHRALVAPVRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAALELAH 99
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNI 142
SL+ DD+ R A A A ++ + L +
Sbjct: 100 TGSLVVDDVEDGSAVRRGRPTAHAAFGTAVALNAGTAAYFAFDRAIDLTLPDDSDLAGEL 159
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-------QKMKTGALMCFACES 195
R+ + +L Q + + + + + ++K+G L+
Sbjct: 160 RALFLAALRAAHMGQALDLQGHHPELEHALTSGESAPVLHSVRLTHRLKSGTLVAAGFTM 219
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A++ A L FG LG +Q+ DD D E
Sbjct: 220 AALVTCAPPALVGALTDFGMALGTAYQITDDTADLEG 256
>gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta
thermophila DSM 6192]
gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta
thermophila DSM 6192]
Length = 327
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 77/216 (35%), Gaps = 9/216 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ DL+ + + + L+ A R A K +R + A RV
Sbjct: 15 RVRDLIREELGSPSGELSSALVDLASRDA----KLLRPGCMVLSARFGVGEGEIPERVVR 70
Query: 78 AIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+ + +D+ RRG +H Y A++ G+ L A E+++ +
Sbjct: 71 LAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEYAS 130
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ S+ + + + + + + KTG L A G
Sbjct: 131 RDHAVFLSRGVRHILDGEIEEVEVRRALGRDAFSLRRYLRRI---LRKTGLLFVVAFHLG 187
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A A A + RLR G N+G+ FQ+ DD+LD
Sbjct: 188 ASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG 223
>gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
pombe 972h-]
gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
Full=All-trans-decaprenyl-diphosphate synthase subunit
1; AltName: Full=Decaprenyl pyrophosphate synthase
subunit 1
gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces
pombe]
gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
pombe]
Length = 378
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 85/248 (34%), Gaps = 31/248 (12%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
++ ++I + +L + ++ Y + GK++R LV +
Sbjct: 37 IKNELEQISPGIRQMLNSNSEFLEECSKY-------YTIAQGKQMRPSLVLLMSKATSLC 89
Query: 65 FNVNHLTALRVGA--------------------AIECIHCYSLIHDDLPSMDNGYIRRGK 104
++ A + +D+ +RRG
Sbjct: 90 HGIDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGS 149
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
P+ ++ + +I+AGN +L A ++ + + + ++ L LQ
Sbjct: 150 PSSNVAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDP 209
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ + + +KT +L+ +C++ I+ S +G +G FQL
Sbjct: 210 SSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLM 269
Query: 225 DDLLDCEE 232
DD+LD
Sbjct: 270 DDVLDYTS 277
>gi|297790967|ref|XP_002863368.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
lyrata]
gi|297309203|gb|EFH39627.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
lyrata]
Length = 343
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 82/253 (32%), Gaps = 23/253 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M L S + ++L DLL + + + + Y + GGK R V
Sbjct: 1 MEADLKSTFLN----VYSVLKSDLLHDPSFEFTDESRLWVERMLDYNVRGGKLNRGLSVV 56
Query: 60 ECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ L + +G IE + Y L+ DD+ MDN RRG+P
Sbjct: 57 DSFKLLKEGKDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQ 114
Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI G L + I+ + + + + G + + + E
Sbjct: 115 VGMVAINDGILLRNHIHRILKKHFRGMPYYVDLVDLFNEVELQTACGQMIDLITTFEGEK 174
Query: 172 IDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
I + +MA + ++ ++GI FQ+ DD
Sbjct: 175 DLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDD 234
Query: 227 LLDCEED---LPK 236
LDC D L K
Sbjct: 235 YLDCFADPETLGK 247
>gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora]
Length = 444
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 81/258 (31%), Gaps = 48/258 (18%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + L A +Y GK +R +V + + R + ++
Sbjct: 85 KFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALCPKAPQRQQSTLQ 144
Query: 81 CIH----------------------------------------------CYSLIHDDLPS 94
++
Sbjct: 145 ASAAIDTSISPLNILSDFNPSAATPASETTPADTDILPSQRRLAEITELIHTASLLHDDV 204
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHN 153
+D+ RRG P+ ++++ A++AG+ LL A ++ + + + + +
Sbjct: 205 IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIANLVEGE 264
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
+ + T +KT +L+ +C + A++ A + +
Sbjct: 265 FMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLY 324
Query: 214 GENLGIIFQLADDLLDCE 231
G+NLG+ FQL DD+LD
Sbjct: 325 GKNLGLAFQLVDDMLDYT 342
>gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
Length = 368
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 79/253 (31%), Gaps = 24/253 (9%)
Query: 3 GGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ S++ S++ +T L++ L T + + Q + AI + GGK++R+ L
Sbjct: 12 NDIESRITFLISQQFNTGLENNLSSTCAQILQQV---IKQAIV-SSEGGKRLRALLTISA 67
Query: 62 A-------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN-GYIRRGKPTVHIQYDE 113
++ ++ + + A+E +LIHDD+ + +
Sbjct: 68 FYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKVCN 127
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
I G GL+ S L G +
Sbjct: 128 NKHIGTGLGLMLGDLLATESFDIARNRAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEM 187
Query: 174 ETQVFMIQ----------KMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQ 222
IQ G + A+ E L G +LG+ FQ
Sbjct: 188 MQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQ 247
Query: 223 LADDLLDCEEDLP 235
+ADDLLD D
Sbjct: 248 IADDLLDIVSDSK 260
>gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
KT71]
Length = 290
Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 12/219 (5%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
+ +L + + A + L +A+ +++ GG ++R L A + +
Sbjct: 8 FEQVLRSAVEEAA---DARCPKLLAAALHHSVFPGGARVRPKLCLAVALANHCDAPALAA 64
Query: 75 VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A ++E +HC SL+HDD+P DN RRG+ +VH Y E A++AG+ L+ AF +++
Sbjct: 65 AAAASVELLHCASLVHDDMPCFDNADERRGRQSVHTAYGEPIALLAGDALIVSAFALLAR 124
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
P+ K+ + + + G+ GQ + + +
Sbjct: 125 PQLPAKNRLSQLMRVVAEGVGAPCGIAAGQAWESEPV-------VDVSLYHRAKTGALFI 177
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ A A A+ + + G +G +Q+ADD+ D
Sbjct: 178 AATAAGAAAAGVDVAPWKLLGAKIGEAYQVADDIQDATS 216
>gi|42558474|gb|AAS19931.1| farnesyl diphosphate synthase [Taxus x media]
Length = 351
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 67/244 (27%), Gaps = 12/244 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTE 60
N ++ ++ L +L+ + T+ + + Y + GGK R V +
Sbjct: 6 NANFSVDMKSKFLQVYEHLKAEILRDPAFDYTEDARVWVEKMLDYNVPGGKLNRGLSVID 65
Query: 61 CASL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG---YIRRGKPTVHIQ 110
L +G IE + Y L+ DD+ + +
Sbjct: 66 SYRLLKNGKVLSEGEVFLGCVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPKVGL 125
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
I+ N + + + T L ++ +
Sbjct: 126 VAANDGILLRNHITRILKMHFRTKPYYSDPLDLFNEVEFQTACGQLLDLITTHEGAMDLS 185
Query: 171 FIDETQVFMI-QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I Q +MA + + ++ +G FQ+ DD LD
Sbjct: 186 KYKMPTYLRIVQYKTAYYSFYLPVACALLMAGENLDNFVDVKNILIQMGTYFQVQDDYLD 245
Query: 230 CEED 233
C D
Sbjct: 246 CFGD 249
>gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi]
Length = 363
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 86/236 (36%), Gaps = 34/236 (14%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
A + +N L +Y GK +R LV A H++ +I I
Sbjct: 44 QNMAGLVSNSNNAVLNHIAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSID 103
Query: 84 C-------------------YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ MDN RRG+PTVH YD A++AG+ LL
Sbjct: 104 EISSGAIRPFLRLGEITELLHTATLVHDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLL 163
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A I++ + S + L +Q D D K
Sbjct: 164 ARASIWIAALGNSRVVLLMSTALEDLAAGEMMQM----------DGCFDIESYEQKSYCK 213
Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
T +L+ + S A++A + +E FG++LGI FQ+ DD LD D L K
Sbjct: 214 TASLIANSLASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGDDKNLGK 269
>gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str.
Silveira]
Length = 472
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 58/273 (21%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------- 61
L + + + L +Y GK++R LV
Sbjct: 106 KFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSPQDRQILNT 165
Query: 62 ----------ASLFNVNHLTALRVGAAIECIHCYSLIHD--------------------- 90
A L + N L YS
Sbjct: 166 EGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEITELIHTA 225
Query: 91 ---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QL 146
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 226 SLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVI 285
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + +K+ +L+ +C + A++ +
Sbjct: 286 ANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLGQTAPEV 345
Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
E +G NLG+ FQL DD+LD E+L K
Sbjct: 346 VEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378
>gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 472
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 58/273 (21%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------- 61
L + + + L +Y GK++R LV
Sbjct: 106 KFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSLQDRQILNT 165
Query: 62 ----------ASLFNVNHLTALRVGAAIECIHCYSLIHD--------------------- 90
A L + N L YS
Sbjct: 166 EGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEITELIHTA 225
Query: 91 ---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QL 146
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 226 SLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVI 285
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + +K+ +L+ +C + A++ +
Sbjct: 286 ANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLGQTAPEV 345
Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
E +G NLG+ FQL DD+LD E+L K
Sbjct: 346 VEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378
>gi|152013432|sp|P0C565|CPPAS_TANCI RecName: Full=Chrysanthemyl diphosphate synthase, chloroplastic;
Short=CPPase; Flags: Precursor
Length = 395
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 74/244 (30%), Gaps = 11/244 (4%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ L S L + + +T+ +L+ + + I Y + GGK +R + V
Sbjct: 50 LTTTLSSNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNVPGGKMVRGYSVV 109
Query: 60 ECASLFNVNH--LTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ L + A+ + MD + RRG+P +
Sbjct: 110 DSYQLLKGEELTEDEAFLACALGWCTEWLQAFILVLDDIMDGSHTRRGQPCWFRLPEVGV 169
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRS-----QLMLSLTHNIGLQGMLGGQMLDIQD 169
AI G L + I+ + + + +
Sbjct: 170 VAINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEFQTISGQMIDTICRLAGQKDLS 229
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
++ ++Q + +M + + +++ LG+ +Q+ +D LD
Sbjct: 230 KYTMTLNRRIVQYKGSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQIQNDYLD 289
Query: 230 CEED 233
D
Sbjct: 290 TFGD 293
>gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS]
Length = 472
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 58/273 (21%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------- 61
L + + + L +Y GK++R LV
Sbjct: 106 KFLKKNIRQLLGSGHPLLDRVAKYYARSEGKQVRPLLVLLMSQATALTPRSPQDRQILNT 165
Query: 62 ----------ASLFNVNHLTALRVGAAIECIHCYSLIHD--------------------- 90
A L + N L YS
Sbjct: 166 EGINASISSPAILADTNPDYNLLTAPMTGNETAYSFAEGDVNILPSQRRLAEITELIHTA 225
Query: 91 ---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QL 146
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 226 SLLHDDVIDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVI 285
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + +K+ +L+ +C + A++ +
Sbjct: 286 ANLVEGEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLISKSCRAAALLGQTAPEV 345
Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
E +G NLG+ FQL DD+LD E+L K
Sbjct: 346 VEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378
>gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
Length = 297
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ KT L+ + GA++A+ ++++ +G+NLG+ FQ+ DD+LD + D
Sbjct: 144 YLQMIYNKTAVLIEASARCGALLANLNEDD---FAEYGKNLGLAFQIVDDILDIKGDE 198
>gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 410
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 76/268 (28%), Gaps = 40/268 (14%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECA 62
+ + + DT++ + + ++ + LL AI GGK++R+ L
Sbjct: 36 IAEEQRAYLHAFDTLMAEFFARQRELLEGISAETLPLLEAIESLSTGGKRLRALLSYWGW 95
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHD-----DLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+T R +I + +D RRG P+VH +++
Sbjct: 96 RGAGGAPVTENRASWSIVKAGMAVELFQTSALIHDDIIDRSDTRRGAPSVHKRFEAAHEQ 155
Query: 118 IA-------------------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+ F + + G
Sbjct: 156 NSWRGDAFNYGLTGGILAGDLTLAWSAEVFASLGEGAIYGAPARTIFDRMRTEVLAGQYL 215
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMA----------HASQNEK 207
+ ++L+ +D + + + K+ G +A A +
Sbjct: 216 DVYSEVLETEDAQAALQRALNVIRFKSAKYSCEHPFTIGGALALQATALENGTGAVSEQH 275
Query: 208 ERL---RCFGENLGIIFQLADDLLDCEE 232
L R FG LG FQL DD L
Sbjct: 276 PVLAGYRAFGLPLGEGFQLRDDELGVFG 303
>gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2]
Length = 401
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 71/252 (28%), Gaps = 26/252 (10%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + + ++ L A+ D + A+ GGK IR L+ L +
Sbjct: 34 ESIAAEVSAGIEAFLELKAAEFLAISPDADDIGRALLEFTRGGKMIRPVLLWWGFQLASG 93
Query: 68 NHLTA-----------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
+ + + + +S P++ + R
Sbjct: 94 DDSSRSALNGGVAEAAGSLELLHAAALIHDDVIDHSDTRRGKPALHRQFESRHSERRFQG 153
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKT-------QLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
E + A + + + L +G + +
Sbjct: 154 GAEPFGVAAAIVIGDICLALSEELFEKSQSVLGITPSARDLRATLRRDVMVGQYLDVLAE 213
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
++ + D I E ++ + GA + A + + + FG LG FQL
Sbjct: 214 VVPLDDARIGERAWEVLSFKSAKYSVEQPLLLGAALGGADEEQLAEISRFGLPLGQAFQL 273
Query: 224 ADDLLDCEEDLP 235
DD+L D
Sbjct: 274 RDDVLGIFGDPA 285
>gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1]
gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1]
Length = 357
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KTGAL+ AC GA+ A A +E + + FG G+ FQL DDL+ D
Sbjct: 195 DECLTMAMAKTGALLGCACALGALYAGAGPDEVDAMDAFGREAGLAFQLIDDLIGIWGDP 254
Query: 235 P 235
Sbjct: 255 G 255
>gi|68165941|gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
Length = 342
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 16/240 (6%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
S L+ + ++L +LL A + + Y + GGK R V + L
Sbjct: 2 SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ + +G IE + Y L+ DD+ MD+ + RRG+P A+
Sbjct: 62 KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGMIAV 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ Q + + + G + + + E
Sbjct: 120 NDGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +M+ + ++ +G FQ+ DD LDC
Sbjct: 180 LPIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFG 239
>gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens]
Length = 341
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 53 IRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
IR+ +V A +++ ++ IE +H SL HDD+ +D RRG P+V
Sbjct: 141 IRATMVLLTARALRKQGSSNMRQRKLAEIIEIVHTASLFHDDV--IDGADTRRGCPSVSA 198
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ + AI+AG+ LL A ++ + + + + H + + + D
Sbjct: 199 KFGDKVAILAGDFLLARACVALAKLENLAVVE---LISVVIEHLVRGEIIQMRPESGTSD 255
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
KTG+LM AC + A++ +Q + +G ++G+ FQL DD+LD
Sbjct: 256 THALLEAYLQKTFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILD 315
Query: 230 CE-EDLP 235
E DL
Sbjct: 316 FEASDLE 322
>gi|33340604|gb|AAQ14872.1|AF330037_1 truncated farnesyl diphosphate synthase [Zea mays]
Length = 341
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 65/234 (27%), Gaps = 12/234 (5%)
Query: 14 KRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--- 69
RI L ++LL A + + + Y +LGGK R V + L
Sbjct: 8 ARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGADALG 67
Query: 70 LTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTY 126
+ + + + MD+ + RRG+P A G L +
Sbjct: 68 EEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRNH 127
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----- 181
I+ + + G L + + E +
Sbjct: 128 ISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQ 187
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + + + +G FQ+ DD LDC D
Sbjct: 188 YKTAYYSFYLPVACALLLSGENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPE 241
>gi|21218742|ref|NP_624521.1| geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor
A3(2)]
gi|5748647|emb|CAB53152.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
coelicolor A3(2)]
Length = 392
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 63/246 (25%), Gaps = 21/246 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFN 66
+ + +D +L +L + H + GGK++R+
Sbjct: 34 DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAALTARGGKRLRTAFAHCGWRAAG 93
Query: 67 VNHLTA------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + + S+ P++ R E
Sbjct: 94 GSGDATAVLRTGAALELLQACALVHDDVMDGSVQRRGAPALHVDLARGHWAAGMHGSSES 153
Query: 115 TAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
A +A ++++ R + G
Sbjct: 154 FGTSAAVLTGDLALAWADDLLTETALGTPHGPRLHGEWRAMRTEMVAGQYRDLHAQAARS 213
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + GA++A A + E LR G G+ FQL DDLL
Sbjct: 214 SGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLG 273
Query: 230 CEEDLP 235
D
Sbjct: 274 AFGDPA 279
>gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi]
gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
Length = 363
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 71/229 (31%), Gaps = 20/229 (8%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
A + +N L +Y GK +R LV A H++ +I I
Sbjct: 44 QNMAGLVSNSNNAVLNHIAKYVFSVSGKMLRPTLVAMMAHALLPPHVSEQIRAESIGSID 103
Query: 84 CYSLIHDDL------------PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
S + V + + ++
Sbjct: 104 DISSGAIRPFLRLGEITELLHTATLVHDDVMDNSNTRRGQPTVHCLYDTKRAVLAGDFLL 163
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + S+++L ++ L + D D KT +L+
Sbjct: 164 ARASIWIAALGHSRVVLLMS---TALEDLAAGEMMQMDGCFDIESYEQKSYCKTASLIAN 220
Query: 192 ACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ S A++A + +E FG++LGI FQ+ DD LD D L K
Sbjct: 221 SLASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGDDKNLGK 269
>gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3]
Length = 371
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
+KT AL+ +C AI++ AS + FG NLGI FQL DD+LD
Sbjct: 211 FEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVS 270
Query: 232 -EDLPK 236
+DL K
Sbjct: 271 GKDLGK 276
>gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
YJM789]
gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
RM11-1a]
gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291]
gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118]
gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796]
gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13]
gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 473
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
+KT AL+ +C AI++ AS + FG NLGI FQL DD+LD
Sbjct: 313 FEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVS 372
Query: 232 -EDLPK 236
+DL K
Sbjct: 373 GKDLGK 378
>gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c]
gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial;
Short=HPS; Flags: Precursor
gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces
cerevisiae]
gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae]
gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae]
gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c]
gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO]
Length = 473
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
+KT AL+ +C AI++ AS + FG NLGI FQL DD+LD
Sbjct: 313 FEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVS 372
Query: 232 -EDLPK 236
+DL K
Sbjct: 373 GKDLGK 378
>gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
Length = 327
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 75/216 (34%), Gaps = 9/216 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ DL+ + + + L+ A R A K +R + A RV
Sbjct: 15 RVRDLIREELGSPSGELSSALVDLASRDA----KLLRPGCMVLSARFGVGEGEIPERVVR 70
Query: 78 AIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+ + +D+ RRG +H Y A++ G+ L A E+++
Sbjct: 71 LAAALEMLHMATLVHDDIVDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEYA- 129
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L + H + + + E + KTG L A G
Sbjct: 130 --SREHAVFLSRGVRHILDGEIEEVEVRRALGRESFSLRRYLRRILRKTGLLFVVAFHLG 187
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A A A + RLR G N+G+ FQ+ DD+LD
Sbjct: 188 ASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG 223
>gi|70887563|ref|NP_001020642.1| farnesyl pyrophosphate synthase [Danio rerio]
gi|66911345|gb|AAH97112.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[Danio rerio]
gi|182891376|gb|AAI64398.1| Fdps protein [Danio rerio]
Length = 356
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 59/239 (24%), Gaps = 17/239 (7%)
Query: 14 KRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS---LF 65
+ D + L+ + + + +RL ++Y GGK+ R V
Sbjct: 18 QLFDAEFEKLVCELTEQDFTDPVLSDALNRLREVLQYNAPGGKRNRGLSVIGSLRELVSP 77
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + + + + E + A N
Sbjct: 78 SELPTEEVHRALLVGWCIELLQAFFLVADDIMDSSVTRRGQPCWYKKEAIGLDAINDAFL 137
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQV 177
I + + +L L Q M + F E
Sbjct: 138 LEGSIYRLLRRHCRGQPYYVHLLELFTETSFQTELGQALDLMTAPPHKIDLNRFTMERYK 197
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + MA E + +G FQ+ DD LDC D
Sbjct: 198 AIVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCFGDPA 256
>gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C]
gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C]
Length = 355
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 79/248 (31%), Gaps = 22/248 (8%)
Query: 11 ENSKRIDTILDDLLLQT--------ASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
+ +R + + R L +R +L GGK++R L+ E
Sbjct: 6 RHQRRFEARFAAYFDSLTDPAGGMFETPPHGAFPSRALDLVRDMSLRGGKRLRVVLLYEA 65
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-------- 113
A+L + L L A + + D D R G T + E
Sbjct: 66 AALVADDGLAGLDEAAISIELLQTHGLIHDDIIDDAPVRRGGPSTYYAYRHEFPDQPDTA 125
Query: 114 -VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
A++AG+ + ++ + + + + T + G + D
Sbjct: 126 LALALLAGDLAAFLSLRVLLTSGLPADRALAMAAVHADTGAATMTGQMIDLERDFHPAPG 185
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCE 231
+ + + T + G + A A + LR + LGI Q+ DD LD
Sbjct: 186 IDFLHAVTEFKSTRYSVLAPLRMGLLAAGADHTPYDAELRRYATALGIANQIHDDWLDLF 245
Query: 232 ED---LPK 236
D L K
Sbjct: 246 GDPAALGK 253
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 222
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 59/158 (37%), Positives = 88/158 (55%), Gaps = 9/158 (5%)
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQL 146
IHDDLP MDN +RRGKPT H Y E A++AG+ LL AFE ++ + + +
Sbjct: 5 IHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA 64
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGAIMAH 201
++ L IG G++ GQM+D+ E ++ +V I KT AL+ A G IM
Sbjct: 65 VVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGG 124
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++ E E+LR + +G++FQ+ DD+LD E+L K
Sbjct: 125 GTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 162
>gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus
H88]
Length = 522
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD D L K
Sbjct: 381 SCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 428
>gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
H143]
Length = 414
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD D L K
Sbjct: 238 SCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 285
>gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
G186AR]
Length = 521
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD D L K
Sbjct: 380 SCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 427
>gi|154286806|ref|XP_001544198.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
gi|150407839|gb|EDN03380.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
Length = 269
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD D L K
Sbjct: 200 SCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTIHGDELGK 247
>gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
Length = 348
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 90/242 (37%), Gaps = 17/242 (7%)
Query: 13 SKRIDTILDDLLLQTASH-------------MQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
++I+++L L + +H ++L S L LGGK+ R L+
Sbjct: 9 LQKIESVLQKNLPDAPGAGWNENIFGTLPGCVTEKHIEQLSSPCAALLKLGGKRWRPLLL 68
Query: 59 TECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
T CA+ ++ D RRG P HI + TAI
Sbjct: 69 TLCAAAAAGTEESPEAAYEITPLVEFVHTASLIHDDIEDCADTRRGMPAAHITWGIDTAI 128
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
AG+ L A +++ + + +L + L + +
Sbjct: 129 NAGSWLYFTAAACLTNVPLPAERKLALYRLYAEELRRLHLGQAMDIAWHKDNTALPSVQE 188
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLP 235
+ +MKTG L A ++G ++ + ++ + ++G+ FQ+ DD+L+ ++
Sbjct: 189 YEAMVRMKTGTLAALAAKAGTLVGGGTAEQESVMGNAAADIGVGFQILDDVLNLTTGNIG 248
Query: 236 KK 237
KK
Sbjct: 249 KK 250
>gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 137
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
I + KTGAL+ A GA+ A +N L + E++G+ FQ+ DD+LD D
Sbjct: 13 ERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTAT 72
Query: 234 LPKK 237
L K+
Sbjct: 73 LGKR 76
>gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 364
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 78/269 (28%), Gaps = 54/269 (20%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L + + L +Y GK +R +V + ++ +
Sbjct: 2 KFLTGNIRKLLGSGHPSLDRVAKYYTQAEGKHVRPLIVLLMSRATSLCPKAPRQQYIQSA 61
Query: 81 CIHC-------------------------------------------------YSLIHDD 91
++
Sbjct: 62 AGIDTSISPIGILGDANPSSSIQALDNQSDLSSHSDPDILPSQRRLAEITELIHTASLLH 121
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
+D+ RRG P+ ++++ A++ G+ LL A ++ + + + + +
Sbjct: 122 DDVIDHSESRRGSPSANLEFGNKMAVLGGDFLLGRASVALARLRDAEVTELLATVIANLV 181
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
T +KT +L+ +C + A++ A +
Sbjct: 182 EGEFMQLKNTSRDESRPVWSEDALTYYLQKTYLKTASLISKSCRASALLGGADAQTVDAA 241
Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
FG+NLG+ FQL DD+LD DL K
Sbjct: 242 YAFGKNLGLAFQLVDDMLDYTVSAVDLGK 270
>gi|225163555|ref|ZP_03725865.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
gi|224801821|gb|EEG20107.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
Length = 136
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
I KT A++ + G ++ A + L G LG+ FQ+ DD+LD D L
Sbjct: 16 DYIHLNKTAAMIRASLVMGGLVGGADEPALATLARAGRQLGLAFQIIDDILDTTADQATL 75
Query: 235 PK 236
K
Sbjct: 76 GK 77
>gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida albicans WO-1]
Length = 507
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM +C + A+++ A + E FG NLG+ FQ+ DD+LD
Sbjct: 348 FEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 406
>gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
Length = 504
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM +C + A+++ A + E FG NLG+ FQ+ DD+LD
Sbjct: 345 FEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 403
>gi|75145468|sp|Q7XYS8|CHRDS_ARTSI RecName: Full=Monoterpene synthase FDS-5, chloroplastic; AltName:
Full=Chrysanthemyl diphosphate synthase; Short=CPP
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Lavandulyl diphosphate synthase; Short=LPP
synthase; Flags: Precursor
gi|32329201|gb|AAP74721.1| chrysanthemyl diphosphate synthase [Artemisia spiciformis]
Length = 394
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 13/245 (5%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ L S L + + +T+ +L+ + I Y + GGK +R + V
Sbjct: 49 LTTTLSSNLNSQFMQVYETLKSELIHDPLFEFDDDSRQWVERMIDYTVPGGKMVRGYSVV 108
Query: 60 ECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ L A +G E + L+HDD+ + + +
Sbjct: 109 DSYQLLKGEELTEEEAFLACALGWCTEWFQAFILLHDDMMDGSHTRRGQPCW-FRLPEVG 167
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----LDIQ 168
AI G L + I+ + + + T + G + +
Sbjct: 168 AVAINDGVLLRNHVHRILKKHFQGKAYYVHLVDLFNETEFQTISGQMIDTISRLAGQKEL 227
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
++ ++Q +M + ++ +++ LG+ +Q+ +D L
Sbjct: 228 SKYSMSLNRRIVQYKGAYYSCYLPIACALLMFGENLDDYVQVKDILVELGMYYQIQNDYL 287
Query: 229 DCEED 233
D D
Sbjct: 288 DTFGD 292
>gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
Length = 510
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM +C + A+++ A + E FG NLG+ FQ+ DD+LD
Sbjct: 351 FEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 409
>gi|63022081|gb|AAY26575.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana]
Length = 428
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 13/225 (5%)
Query: 24 LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAI 79
L +T+ H+ R L ++Y + GKK R + + + +
Sbjct: 104 LTETSKHVDVPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLEKPENLTPENVHLANVM 163
Query: 80 ECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYD------EVTAIIAGNGLLTYAFEII 131
H L M+ +RRG P H + D ++ T
Sbjct: 164 GWCTEMFHTHQLLLNDIMEGTEMRRGAPAWHRRPDVGLSSINDAILVQSAMYSTLKKHFH 223
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ P + + ++++L + L+ + +F E + + +
Sbjct: 224 AKPYYKNVIEMFNEMLLKCSTGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAYHTFQM 283
Query: 192 ACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+M+ + + +G FQ+ DD LDC D
Sbjct: 284 PVGLALLMSGVDDLETHRQAKTILLEMGQFFQIQDDFLDCFGDPA 328
>gi|164605010|dbj|BAF98301.1| farnesyl-diphosphate synthase [Hevea brasiliensis]
Length = 342
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL- 64
+ L+ ++ ++L LL+ + T + + + + Y + GGK R V + L
Sbjct: 2 ADLKSTFLKVYSVLKQELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
A +G IE + Y L+ DD+ MD+ + RRG+P A
Sbjct: 62 KEGQELTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGLIAA 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ + + + G + + +++E
Sbjct: 120 NDGILLRNHIPRILKKHFRGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEEEKDLSKYT 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + ++A + + ++ +GI FQ+ DD LDC
Sbjct: 180 LSLHRRIVQYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFG 239
Query: 233 DLP 235
D
Sbjct: 240 DPE 242
>gi|162462162|ref|NP_001105039.1| farnesyl pyrophosphate synthase [Zea mays]
gi|1346033|sp|P49353|FPPS_MAIZE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|33340602|gb|AAQ14871.1|AF330036_1 farnesyl diphosphate synthase [Zea mays]
gi|662368|gb|AAB39276.1| farnesyl pyrophosphate synthetase [Zea mays]
gi|194702348|gb|ACF85258.1| unknown [Zea mays]
gi|194708184|gb|ACF88176.1| unknown [Zea mays]
gi|195623932|gb|ACG33796.1| farnesyl pyrophosphate synthetase [Zea mays]
Length = 350
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 65/234 (27%), Gaps = 12/234 (5%)
Query: 14 KRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--- 69
RI L ++LL A + + + Y +LGGK R V + L
Sbjct: 17 ARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGADALG 76
Query: 70 LTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTY 126
+ + + + MD+ + RRG+P A G L +
Sbjct: 77 EEETFLACTLGWCIEWLQAFFLVLDDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRNH 136
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----- 181
I+ + + G L + + E +
Sbjct: 137 ISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQ 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + + + +G FQ+ DD LDC D
Sbjct: 197 YKTAYYSFYLPVACALLLSGENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPE 250
>gi|289774146|ref|ZP_06533524.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
gi|289704345|gb|EFD71774.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
Length = 392
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 61/246 (24%), Gaps = 21/246 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFN 66
+ + +D +L +L + H + GGK++R+
Sbjct: 34 DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAALTARGGKRLRTAFAHCGWRAAG 93
Query: 67 VNHLTA------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + + S+ P++ R E
Sbjct: 94 GSGDATAVLRTGAALELLQACALVHDDVMDGSVQRRGAPALHVDLARGHWAAGMHGSSES 153
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A A T+ L M+ GQ D+ +
Sbjct: 154 FGTSAAVLTGDLALAWADDLLTETALGTPHGPRLHGEWRAMRTEMVAGQYRDLHAQAARS 213
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLD 229
+ V + T + + + E LR G G+ FQL DDLL
Sbjct: 214 SGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLG 273
Query: 230 CEEDLP 235
D
Sbjct: 274 AFGDPA 279
>gi|63103161|gb|AAY33486.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana]
Length = 428
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 13/225 (5%)
Query: 24 LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAI 79
L +T+ H+ R L ++Y + GKK R + + + +
Sbjct: 104 LTETSKHVDVPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLEKPENLTPENVHLANVM 163
Query: 80 ECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYD------EVTAIIAGNGLLTYAFEII 131
H L M+ +RRG P H + D ++ T
Sbjct: 164 GWCTEMFHTHQLLLNDIMEGTEMRRGAPAWHRRPDVGLSSINDAILVQSAMYSTLKKHFH 223
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ P + + ++++L + L+ + +F E + + +
Sbjct: 224 AKPYYKNVIEMFNEMLLKCSTGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAYHTFQM 283
Query: 192 ACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+M+ + + +G FQ+ DD LDC D
Sbjct: 284 PVGLALLMSGVDDLETHRQAKTILLEMGQFFQIQDDFLDCFGDPA 328
>gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
Length = 372
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 63/247 (25%), Gaps = 27/247 (10%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
+D L + + + + L+ A+ + GGK++R+
Sbjct: 18 VDAALGRHVARLREEAERISPEAGALVDAVERMVAGGKRLRAAFCYWSWRAHGGTPGDGR 77
Query: 74 RVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN--------- 121
G MD+ RRG PT H + + A
Sbjct: 78 EQGVLRAGAALELFQAAALFHDDVMDDSSTRRGLPTAHRVFADEHAGSGRRGEPRRFGDG 137
Query: 122 -----------GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLDIQ 168
++ + S T Q + M
Sbjct: 138 VAILLGDLALIASDEEMTRALAGLPVSVAQAAHSVFSSMRTEVTVGQYLDLVAQTMPWGT 197
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ + +++ + GA +A A R G LG FQL DDLL
Sbjct: 198 ADDDERRAREVVRAKSARYSVEHPIVLGAALAGADDAAVAGCRAVGLPLGEAFQLRDDLL 257
Query: 229 DCEEDLP 235
D
Sbjct: 258 GVLGDPA 264
>gi|212960746|gb|ACJ38671.1| farnesyl pyrophosphate synthase [Chimonanthus praecox]
Length = 358
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 76/244 (31%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
NG + + D + +LL +A + + Y + GGK R V +
Sbjct: 14 NGKISDPRSAFMRAYDRLKSELLQDSAFDFTDDSRQWIDRMLDYNVPGGKLNRGLSVIDS 73
Query: 62 AS-------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
L A +G IE + Y L+ DD+ + + + ++
Sbjct: 74 YKSLKQGKELSEEEIFLACVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCW-FRVPKVDM 132
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----D 169
A+ G L + I+ + + + + G + + +
Sbjct: 133 IAVNDGILLRNHIPRILRRHFREKPYYVDLLDLFNEVEFQTASGQMLDLITTHEGESDLS 192
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
++ ++Q +M+ + ++ +G FQ+ DD LD
Sbjct: 193 KYSMPVYRRIVQYKTAYYSFYLPVACALLMSGENLENFIDVKNILIEMGTYFQVQDDYLD 252
Query: 230 CEED 233
C D
Sbjct: 253 CFGD 256
>gi|256790271|ref|ZP_05528702.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
Length = 375
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 61/246 (24%), Gaps = 21/246 (8%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFN 66
+ + +D +L +L + H + GGK++R+
Sbjct: 17 DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAALTARGGKRLRTAFAHCGWRAAG 76
Query: 67 VNHLTA------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ + + S+ P++ R E
Sbjct: 77 GSGDATAVLRTGAALELLQACALVHDDVMDGSVQRRGAPALHVDLARGHWAAGMHGSSES 136
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A A T+ L M+ GQ D+ +
Sbjct: 137 FGTSAAVLTGDLALAWADDLLTETALGTPHGPRLHGEWRAMRTEMVAGQYRDLHAQAARS 196
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLD 229
+ V + T + + + E LR G G+ FQL DDLL
Sbjct: 197 SGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLAFQLRDDLLG 256
Query: 230 CEEDLP 235
D
Sbjct: 257 AFGDPA 262
>gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 142
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
M L+ +D+ + ++ I + KTGAL+ AC +GA++ AS + + + F E+
Sbjct: 1 MKMNQVMDLECEDKDVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSES 60
Query: 217 LGIIFQLADDLLDCEEDLP 235
+G+ FQ+ADD+LDC
Sbjct: 61 IGLAFQVADDILDCTATSE 79
>gi|146424706|dbj|BAF62113.1| farnesyl diphosphate synthase [Bombyx mori]
Length = 427
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 13/223 (5%)
Query: 24 LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------V 75
L +T H+ + L ++Y + GKK R + +
Sbjct: 103 LTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVM 162
Query: 76 GAAIECIHCYSLIHDDLP---SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
G +E H + L+ +D+ +M G + A + + + T
Sbjct: 163 GWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSVKRHFN 222
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S P +++++ + +Q ++ F E + + +
Sbjct: 223 SKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQM 282
Query: 192 ACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+M + + +G FQ+ DD LDC D
Sbjct: 283 PVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGD 325
>gi|18958450|gb|AAL82595.1|AF470318_1 farnesyl pyrophosphare synthase [Musa acuminata]
Length = 357
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 18/246 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
G L + ++ R+ + +LL A + + + Y + GGK R V +
Sbjct: 17 GDLKATFRQIYDRLKS---ELLQDDAFDCTDEARQWIDRMLDYNVPGGKLNRGLSVIDSY 73
Query: 63 SL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
L + +G IE + Y L+ DD+ MDN + RRG+
Sbjct: 74 KLLKEGNQLNDEEVFLGCALGWCIEWLQAYFLVLDDI--MDNSHTRRGQLCWFRVPKVGL 131
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----D 169
A+ G L + I+ + + + G + + +
Sbjct: 132 IAVNDGILLRNHIPRILKRHFKGKPYYVDLLDLFNEVEFQTASGQMLDLITTHEGEKDLS 191
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
++ ++Q +MA + + ++ +G FQ+ DD LD
Sbjct: 192 KYTLPVYNRIVQYKTAYYSFYLPVACALLMAGENLDTFVDVKNILVEMGTYFQVQDDFLD 251
Query: 230 CEEDLP 235
C D
Sbjct: 252 CFGDPE 257
>gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
Length = 304
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 8/229 (3%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECA 62
L L + I+ LD ++ Q L AIRY G+ + + L
Sbjct: 25 LYKYLSSRGEMIEEELDRIMSNLVKSCPAQ----LHKAIRYCTADEEGRHL-ASLCIAAC 79
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + AL + IE L DDLP MDN R+G+ H+++D+ TAI+A
Sbjct: 80 ELVGGDRHAALPMACTIEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQA 139
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L AF + + R +L+ + ++ + + ++
Sbjct: 140 LAALAFGTVVDSTLV-STDKRLRLVKEFSLSMQRLVYGQYDDVKKGESLETLEELNAKNT 198
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT + +GAI+ A + E E LR FG G+++Q+ DDL D
Sbjct: 199 NKTSSFFELPLVAGAIVGGAGEEEIEGLRRFGRYFGLMWQVNDDLSDAT 247
>gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 377
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 81/257 (31%), Gaps = 26/257 (10%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASH---------MQTQHNDRLLSAIRYALL-GGK 51
NG + L + + I+ L D L + + ++ L + + GGK
Sbjct: 11 NGTMKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGK 70
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHC---------------YSLIHDDLPSMD 96
+ R L+ A L + R + ++ D
Sbjct: 71 RWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIED 130
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ RRGKP +++Y + A + L +A +I + +
Sbjct: 131 HSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSATISATRALH 190
Query: 157 QGMLGGQ-MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
G + Q + +KTGAL+ + E G + A S E
Sbjct: 191 MGQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREARSFGAQVM 250
Query: 216 NLGIIFQLADDLLDCEE 232
+GI FQ+ DD+ +
Sbjct: 251 PIGIGFQILDDVQGIDG 267
>gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88]
gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger]
Length = 450
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 53/268 (19%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF--------------- 65
L + + + L +Y GK +R LV +
Sbjct: 89 KFLTKNLRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALCPRKTGTDNNSAT 148
Query: 66 ---------------------------------NVNHLTALRVGAAIECIHCYSLIHDDL 92
+ + A ++
Sbjct: 149 VNDPISSPSILVDNNPDLDALSSGSADAPYDFAGDKDILPTQRRLAEITELIHTASLLHD 208
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLT 151
+DN RR + ++Q+ A++AG+ +L A ++ + + + + +
Sbjct: 209 DVIDNAVSRRSLTSANLQFGNKMAVLAGDFMLGRASVALARLRDPEVIELMSTVITNLVE 268
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ + +KTG+L+ +C S A++ H++ E
Sbjct: 269 GEFMQLKNTAADEKNPVFTDDTLSYYLQKTYLKTGSLISKSCRSTAVLGHSAPEVVEASY 328
Query: 212 CFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD +L K
Sbjct: 329 QYGRNLGLAFQLVDDMLDYTLTEAELGK 356
>gi|22676905|gb|AAM98379.1| farnesyl diphosphate synthase [Hevea brasiliensis]
gi|34013692|gb|AAQ56011.1| farnesyl diphosphate synthase [Hevea brasiliensis]
Length = 342
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 83/243 (34%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL- 64
+ L+ ++ ++L LL+ + T + + + + Y + GGK R V + L
Sbjct: 2 ADLKSTFLKVYSVLKQELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
A +G IE + Y L+ DD+ MD+ + RRG+P A
Sbjct: 62 KEGQELTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGLIAA 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ + + + G + + ++ E
Sbjct: 120 NDGILLRNHIPRILKKHFRGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYT 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + ++A + + ++ +GI FQ+ DD LDC
Sbjct: 180 LSLHRRIVQYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFG 239
Query: 233 DLP 235
D
Sbjct: 240 DPE 242
>gi|25452946|sp|O24242|FPPS2_PARAR RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 2; AltName:
Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Geranyltranstransferase 2
gi|1532052|emb|CAA57893.1| farnesyl diphosphate synthase [Parthenium argentatum]
Length = 342
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 65/242 (26%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ + SK + DT+ +L+ A + + Y + GGK R V +
Sbjct: 1 MSTDIRSKFLQVY---DTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVID 57
Query: 61 CASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
L + + MD + RRG+P
Sbjct: 58 SYQLLKGGKLTDDEIFHASALGWCVEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMI 117
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A G L + I+ + + + G + + + E
Sbjct: 118 AANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSK 177
Query: 176 QVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + +M + ++ +G FQ+ DD LDC
Sbjct: 178 YSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDC 237
Query: 231 EE 232
Sbjct: 238 FG 239
>gi|315024113|gb|ADR83704.1| farnesyl pyrophosphate synthase [Alisma plantago-aquatica]
Length = 343
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + + Y + GGK R V + L +
Sbjct: 31 ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P A G L + ++
Sbjct: 91 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRIPKVGLIAANDGIILRNHIPRMLQR 148
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188
+ + + G + + + ++ ++Q
Sbjct: 149 HFKGKPYYVDLLDLFNEVEFQTACGQMLDLITTHEGETDLSKYKLPVYKRIVQYKTAYYS 208
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+M+ + ++ ++ +G FQ+ DD LDC D
Sbjct: 209 FYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD 253
>gi|317140569|gb|ADV03674.1| farnesyl pyrophosphate synthase [Alisma orientale]
Length = 343
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + + Y + GGK R V + L +
Sbjct: 31 ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P A G L + ++
Sbjct: 91 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRIPKVGLIAANDGIILRNHIPRMLQR 148
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188
+ + + G + + + ++ ++Q
Sbjct: 149 HFKGKPYYVDLLDLFNEVEFQTACGQMLDLITTHEGETDLSKYKLPVYKRIVQYKTAYYS 208
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+M+ + ++ ++ +G FQ+ DD LDC D
Sbjct: 209 FYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD 253
>gi|157834060|pdb|1UBX|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
Length = 367
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 66/231 (28%), Gaps = 13/231 (5%)
Query: 18 TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECAS---LFNVNHLTAL 73
I+ DL H + RL ++Y GGK R V +L
Sbjct: 37 QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 96
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
R A+ + + + E + A N +
Sbjct: 97 RCALAVGWCIELFQAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRV 156
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
K + +L L Q ++ + + E + I K KT
Sbjct: 157 LKKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTA 216
Query: 187 ALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + A+ + S+ E E + +G FQ+ DD LDC D
Sbjct: 217 FYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPA 267
>gi|157834058|pdb|1UBV|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
gi|157834059|pdb|1UBW|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
gi|157834061|pdb|1UBY|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
Length = 367
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 66/231 (28%), Gaps = 13/231 (5%)
Query: 18 TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECAS---LFNVNHLTAL 73
I+ DL H + RL ++Y GGK R V +L
Sbjct: 37 QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 96
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
R A+ + + + E + A N +
Sbjct: 97 RCALAVGWCIELFQAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRV 156
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
K + +L L Q ++ + + E + I K KT
Sbjct: 157 LKKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTA 216
Query: 187 ALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + A+ + S+ E E + +G FQ+ DD LDC D
Sbjct: 217 FYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPA 267
>gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1]
gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1]
Length = 364
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 65/239 (27%), Gaps = 23/239 (9%)
Query: 20 LDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN--HLTALRV 75
L L + M T D L+ +I + GGK++R+ + +
Sbjct: 22 LSGFLSEQQDLMATVSPDVEPLIGSISNLVTGGKRLRALMCYWGWRGAGGPAGDPDIITA 81
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G A+E +LIHDD+ + A + I +
Sbjct: 82 GCALELFQAAALIHDDIIDRSDTRRGGPSVHKRFNQLHEMNGWALDSGRFGDAAAILTGD 141
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----------------- 178
L + S + G ++ + +
Sbjct: 142 LCLSFSEESFTEIGHRAAAGSPARRIFNVMRAEVMAGQYLDILEEVAGPVRDRAGSVERA 201
Query: 179 --MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+I+ G +A A + + F LG FQ+ DD+L D
Sbjct: 202 KSIIRYKSAKYSTEHPLALGGALAGAPEGLLKGYSEFSLPLGEAFQMRDDVLGVFGDPE 260
>gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c]
gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c]
Length = 338
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ KTGAL+ A GA++A A + + L FG LG FQL DDLL D
Sbjct: 175 ETLHMEDGKTGALLACAASLGAVLAGAPKEVVDGLAEFGSRLGTAFQLIDDLLGIWGDPA 234
>gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Sat464]
Length = 307
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + + + + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELSSNIGPS--------KMLRSKLMLALLNGKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQTLSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDTKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|311900885|dbj|BAJ33293.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 351
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 27/263 (10%)
Query: 1 MNGGLPSKLQE---NSKRIDTILDDLLLQTASHMQTQHNDR----------LLSAIRYAL 47
MN L + L + +R + L A + L +L
Sbjct: 1 MNDVLAAALSRAAGHQRRFEPRLAAHFDALADPAAGGGPELPGRGRFPARALELLRELSL 60
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK++R L+ E A+L + L A + + D D R G T
Sbjct: 61 RGGKRLRVALLHEAAALVTAGPVPGLDAAALSVELLHTHGLVHDDLIDDAPLRRGGPSTY 120
Query: 108 HIQYDEVT----------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+ E + ++ + + +++ +
Sbjct: 121 YAYLAEFPDRPDTARALTVLAGDLAAFLAVRVLLGPGGPPPERALAMAAVVADAGAAAVG 180
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGEN 216
G L D + TG + G + A A +R LR + E
Sbjct: 181 GQLLDLERDFPPLPDTAFLHEVTAYKSTGYSVLAPLRLGLLAAGADPAPYDRELRGYAEA 240
Query: 217 LGIIFQLADDLLDCEED---LPK 236
+G+ Q+ DDLLD D L K
Sbjct: 241 VGVANQIHDDLLDLFGDQDALGK 263
>gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 243
Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+RID IL + + + ++ ++ S GKK+RS L+ + A +
Sbjct: 1 MERIDDILKEFVDSLNYPLASEMFSQVSS--------GKKLRSKLILKIAGASEAS---- 48
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D+ IRRGKP+++ + +I+ G+ L + F I
Sbjct: 49 --FKLSSVVEIIHLASVLHDDVIDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFNEIV 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ D I + + + D+ + + KT L+ A
Sbjct: 107 KFDMKIADIISDAVCKLSIGELM-------DVELGSSFNADKEKYLKMIYFKTAVLIEAA 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+S AI+A + ++ +G+NLG+ FQ+ DD+LD D
Sbjct: 160 AKSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSDEK 199
>gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
4810]
Length = 377
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 75/262 (28%), Gaps = 32/262 (12%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTEC 61
L ++L + RI I L H+ + +L A+ L GGK +R
Sbjct: 15 DLDARLVD---RISEITRSELSSRRDHLAEISPETAQLADALLEYLDGGKLLRPRFCFWG 71
Query: 62 A----------------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
+ + + + +S + P++ RR +
Sbjct: 72 GVSALGREPTEAEIDALARYGTAIELVQAAALMHDDVIDHSPVRRGRPALHVQAERRHRA 131
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
E + L A + ++ + + + ++ GQ L
Sbjct: 132 EELAGSAEDYGVAVAIVLGDLALSWAEQIASGVEGSPGAVAAAHREFDALRTEVMSGQFL 191
Query: 166 DIQDEFIDETQVFM--------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
DI + + I+ + GA + A E L + +
Sbjct: 192 DILHQAGGFSSAPDAEQAALSVIRWKTVPYTVLRPVRIGAALLGADHTALETLSAWAIEV 251
Query: 218 GIIFQLADDLLDCEED---LPK 236
G FQL DDLL D K
Sbjct: 252 GTAFQLRDDLLSVVGDQDETGK 273
>gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
Length = 309
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 31/244 (12%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L + E +I+ L L + + YA+L GGK++R L +
Sbjct: 4 LTAFQSEWLPKIEQQLKQDLG------VASRDSDFSEMMSYAVLNGGKRLRPMLTLAVVA 57
Query: 64 LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F ++ +V A+E +H YSL+HDDLP+MDN RRGKP+VH +Y E AI+ G+
Sbjct: 58 SFGQKITPSILKVATAVEWVHAYSLVHDDLPAMDNDLFRRGKPSVHARYGEAEAILVGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM------LSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
LLT AF ++SS + +N L+++ G GM+ GQ+ D+++ +
Sbjct: 118 LLTGAFHVVSSANSTDTENENIAAKELLLLSQMLSYHAGAFGMVIGQVEDMKNHRQEAKI 177
Query: 177 VFM-----IQKMKTGALMCFACESGAIMAHASQNEKE------------RLRCFGENLGI 219
+ KT AL+ F+ +G+ ++H + N L FG + G+
Sbjct: 178 DVNWLLNDVYAPKTAALLGFSAIAGSRLSHVNSNSVADNSEIAISTTNSALLTFGTDFGM 237
Query: 220 IFQL 223
FQ+
Sbjct: 238 AFQI 241
>gi|296203641|ref|XP_002748996.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
jacchus]
Length = 408
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 69/257 (26%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL--QENSKRID--TILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIR 54
MNG S + QE + + + +L + + RL + Y +GGK R
Sbjct: 56 MNGDQKSDVYAQEKQDFVHHFSEIVRVLTEDEMEHPETGDAIARLKEVLEYNAIGGKYHR 115
Query: 55 SFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
+V + MD+ RRG+ +
Sbjct: 116 GLMVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTRRGQICWYQ 175
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q + Q
Sbjct: 176 KPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTPDFITAPQ 235
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
D F ++ +++ + MA + E +G FQ
Sbjct: 236 DNVDLDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANANEILLEMGEFFQ 295
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 296 IQDDYLDLFGDPSVTGK 312
>gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida tropicalis MYA-3404]
gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
[Candida tropicalis MYA-3404]
Length = 480
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM +C + A+++ A + E FG NLG+ FQ+ DD+LD
Sbjct: 321 FEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDVIENCYSFGRNLGLCFQIVDDMLDYTS 379
>gi|414611|emb|CAA53433.1| dimethylallyltransferase [Arabidopsis thaliana]
Length = 343
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 19/249 (7%)
Query: 5 LPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + L+ + ++L DLL + + + + Y + GGK R V +
Sbjct: 1 METDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFK 60
Query: 64 L-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
L + +G IE + Y L+ DD+ MDN RRG+P
Sbjct: 61 LLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQVGMV 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI G L + I+ + + + G + + + E
Sbjct: 119 AINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLSK 178
Query: 176 QVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + +MA + ++ ++GI FQ+ DD LDC
Sbjct: 179 YSLSIHRRIVQHKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDC 238
Query: 231 EED---LPK 236
D L K
Sbjct: 239 FADPETLGK 247
>gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 111
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
+ L+ ++ I+ L+ L + +L A+ Y+L GGK+IR LV E A
Sbjct: 2 DIKQYLKSQAEFINKHLEKELSR-------GTPQKLFDAMHYSLNAGGKRIRPVLVLESA 54
Query: 63 SLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
N+ + + A+E IH YSLIHDDLPSMDN +RRGKPT H Y E AI
Sbjct: 55 KACGKNNLEGIIDIALAVEIIHTYSLIHDDLPSMDNDDLRRGKPTCHKVYGEAVAI 110
>gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d]
Length = 307
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLNEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + ++ M G+ + + I + KT +
Sbjct: 115 ELSKMGE--SIAQTLSNAVLRLSRGEIEDMFVGECFNSDKQKYWR-----ILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068]
gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068]
Length = 673
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 87/253 (34%), Gaps = 24/253 (9%)
Query: 6 PSKLQENSKRID--TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA- 62
P +L+ S R+ L + L + + + A + GGK R F+
Sbjct: 297 PEELERLSPRVRGGKRLSE-LGEGEQLDPLAATESI--AYDFLAKGGKYSRPFITMAVHD 353
Query: 63 SLFNVNHLTALRVGAAIECI---------------HCYSLIHDDLPSMDNGYIRRGKPTV 107
+L + E + D+ R G+ TV
Sbjct: 354 ALTGGHGTLPKMPAGGGEVQLDIPDTVKRAALSIETFHKASLVHDDIEDDDAFRYGEETV 413
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---M 164
H ++ TAI G+ L+ + ++S + + + ++ L G
Sbjct: 414 HRRFGTPTAINVGDYLIGMGYRLVSKQSRAMGPDTAADILDILADAHIRLSEGQGAELLW 473
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
D +D+ + I +KT A SGA +A E LR F NLG+ FQ+
Sbjct: 474 RDARDKRLSPLDALKIYALKTSPAFEAALLSGARLAGDVTQYLEPLRQFARNLGVAFQIL 533
Query: 225 DDLLDCEEDLPKK 237
+DL D + D K
Sbjct: 534 NDLGDWQGDSHNK 546
>gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
Length = 260
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D +RRGK T + + +++ G+ + T +F++++ + +
Sbjct: 12 FIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKL 71
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S + + Q M ++ ++D + KT L A + GAI+ A
Sbjct: 72 MSDAVNVIAEGEVQQLMNCNDPDTTEEIYMD------VIYSKTARLFEAATQIGAILNDA 125
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + L+ +G+ LG FQL DD++D D
Sbjct: 126 PEDVETALQNYGKYLGTAFQLIDDVMDYTSD 156
>gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 322
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ + + E+ +D ++ + L ++ + S GGK++R LV +
Sbjct: 4 ETIYAAVNEDFLSVDGLIKNQLFSNVPLVEKIGQYIIDS-------GGKRLRPLLVLLVS 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ N L++ A IE +H +L+HDD+ +D +RRG+ T + ++ +++ G+
Sbjct: 57 NALNATEKHYLKLAAIIEFLHTATLLHDDV--VDTSDLRRGRDTANAKWGNAPSVLVGDF 114
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + AF+++ + ++ + + LQ + Q +
Sbjct: 115 LYSRAFQMMVELRDMDVMSVLANATNVIAEGEVLQLTNCKNPDITE------AQYMEVIT 168
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
KT L A S AI+ AS ++ FG LGI FQL DD+LD + +
Sbjct: 169 AKTAMLFEAASHSAAILCQASAETTSDMKEFGLELGIAFQLIDDVLDYQGNAA 221
>gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Cuz20]
Length = 307
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLNGKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQTLSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299]
gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 30/224 (13%)
Query: 37 DRLLSAIRYAL---LGGKKIRSFLVTECASL------FNVNHLTALRVGAAIECI----- 82
L +A Y GK++R ++ AS + L+ R + +
Sbjct: 10 PALATAAEYFFKVGAEGKRMRPTVLLLMASALTDLSSGGADALSRARAASVPDDTRRRQQ 69
Query: 83 -------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ +D+ RRG ++++ AI+AG+ LL A ++S +
Sbjct: 70 RLAEITELIHVASLLHDDVLDSAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLR 129
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ S+++ L +Q + L D + +T KT +L+ + ++
Sbjct: 130 NTEVIELLSRVLEHLVTGEVMQMTAKPERLMSFDHYFQKT------YFKTASLIANSAKA 183
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ +G +LG+ FQ DD+LD L K
Sbjct: 184 IVLLGGHDTETASHAYDYGRHLGLAFQFQDDVLDFVGSGSVLGK 227
>gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Shi470]
gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Shi470]
Length = 307
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 82/230 (35%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLNGKTDTI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|270356886|gb|ACZ80672.1| putative isoprenoid biosynthesis-related protein [Filobasidiella
depauperata]
Length = 375
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 65/244 (26%), Gaps = 13/244 (5%)
Query: 2 NGGLPSKLQENSKRI-DTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ + + + +++ D I ++LL M + + + GGK R V
Sbjct: 24 SADIKAARRARFEKVFDQIAEELLAYVKVEGMPKDAVEWYQKVLYHNTPGGKLNRGMSVV 83
Query: 60 ECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ + N ++ C+ + + + R + V
Sbjct: 84 DTVEILKGRDLNEEEYVKAAILGWCVELLQAYFLVADDIMDQSVTRRGQPCWYKMPNVGN 143
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQD 169
I + + A K + LM + + +
Sbjct: 144 IAINDAFMLEAAIYHLLKKHFRSEKYYVDLMELFLETTFQTELGQLVDLITAPEDHVDLN 203
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLADDLL 228
+F E ++ M+ + L LG FQ+ DD L
Sbjct: 204 KFSLEKHHLIVVYKTAFYSFYLPVALAMRMSGIEDKDAYDLAVKILIPLGEYFQVQDDYL 263
Query: 229 DCEE 232
DC
Sbjct: 264 DCYG 267
>gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
EAS054]
Length = 335
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 74/208 (35%), Gaps = 15/208 (7%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ ++D L Q M + GGK+ R A + A
Sbjct: 30 EQLMDTELRQADEVMSDSL-------LHLFNAGGKRFRPLFTVLSAQI-GPQPDAAAVTV 81
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A + MD +RRG P+ + Q+ AI+AG+ LL A +++
Sbjct: 82 AGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I +T + + + Q + + KTG+L+ A G
Sbjct: 142 EAVRIIADTFAQLVTGQMR-------ETRGTSENVDSIKQYLKVVQEKTGSLIGAAGRLG 194
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + A+ + ERL G +G FQ+A
Sbjct: 195 GMFSGATDEQVERLSRLGGVVGTAFQIA 222
>gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
tuberculosis H37Ra]
gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
F11]
gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
H37Ra]
gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
02_1987]
gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 1435]
gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
C]
gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
str. Haarlem]
gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 605]
gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
02_1987]
gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
210]
gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 4207]
gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN R506]
gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu001]
gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu002]
gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu003]
gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu004]
gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu005]
gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu006]
gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu008]
gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu007]
gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu009]
gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu010]
gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu011]
gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu012]
gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN V2475]
gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
H37Rv]
gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
AF2122/97]
gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
C]
gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
str. Haarlem]
gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
tuberculosis H37Ra]
gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
F11]
gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 1435]
gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T46]
gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CPHL_A]
gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 605]
gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T17]
gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
02_1987]
gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T92]
gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
GM 1503]
gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
T85]
gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
94_M4241A]
gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu001]
gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu002]
gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu003]
gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu004]
gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu005]
gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu006]
gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu007]
gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu008]
gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu009]
gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu010]
gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu011]
gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
SUMu012]
gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
CDC1551A]
gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
W-148]
gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
KZN 4207]
Length = 335
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 74/208 (35%), Gaps = 15/208 (7%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ ++D L Q M + GGK+ R A + A
Sbjct: 30 EQLMDTELRQADEVMSDSL-------LHLFNAGGKRFRPLFTVLSAQI-GPQPDAAAVTV 81
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A + MD +RRG P+ + Q+ AI+AG+ LL A +++
Sbjct: 82 AGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I +T + + + Q + + KTG+L+ A G
Sbjct: 142 EAVRIIADTFAQLVTGQMR-------ETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLG 194
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + A+ + ERL G +G FQ+A
Sbjct: 195 GMFSGATDEQVERLSRLGGVVGTAFQIA 222
>gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 358
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 75/223 (33%), Gaps = 25/223 (11%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC----YSLIHDDLP 93
LL ++ + GK IR LV L + + A ++ +
Sbjct: 38 ELLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDD 97
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAII-----------------AGNGLLTYAFEIISSPKT 136
+D +RRG+P VH AG+ LLT AF + ++
Sbjct: 98 VIDRDTLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCAA 157
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFA 192
+ + ++ + G L +L + +E I M+ +
Sbjct: 158 DIARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGAP 217
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+GA++A A + G +LG +Q+ DD+L D
Sbjct: 218 LRAGALLAGADPGLARAMGEAGADLGAAYQVIDDVLGVFGDPG 260
>gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
Length = 377
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 26/250 (10%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFLVTECA-----S 63
++ R+ ++ L + + + + + + GGK++R + +
Sbjct: 16 DADRLHAVITAELARRRADVAAVDPRLVADVELLVEFVTDGGKRLRPQFLWCGWLAGGGA 75
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT--------------VHI 109
+ L+V AA+E + +L+HDD+ R
Sbjct: 76 ATGPDADAVLQVAAALELLQACALLHDDIIDRSQRRRGRPSTHRAVAKRAADAGVAADPE 135
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ AI+ G+ L + ++ + L R+ + L G L + +
Sbjct: 136 HHGVSVAILLGDLALAWCDDLFLAGALPLGAAHRAAPVWRAMRTEVLAGQLLDLAVTVSA 195
Query: 170 EFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E TQ ++ + GA +A A+ LR +G ++G+ FQL D
Sbjct: 196 EADPATQERDAMRVNRYKTAAYTIERPLHLGAALAGAAPATIAALRTYGTDIGVAFQLRD 255
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 256 DLLGVFGDPA 265
>gi|299115584|emb|CBN75787.1| Farnesyl pyrophosphate synthase [Ectocarpus siliculosus]
Length = 499
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 63/244 (25%), Gaps = 18/244 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVT----ECA 62
+++ + + L + L+ + D + + Y GGK R V A
Sbjct: 157 KKSFEAMHKFLVEELVADVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFA 216
Query: 63 SLFNVNHLTALRV-----GAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEV 114
G +E + + L+ DD+ G K +
Sbjct: 217 EANGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAIN 276
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+ I + + L+ + T L + M D
Sbjct: 277 DSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFT 336
Query: 175 TQVFMIQ--KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + C G I A R +G FQ+ DD LDC
Sbjct: 337 PVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCF 396
Query: 232 EDLP 235
D
Sbjct: 397 GDPE 400
>gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58]
gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58]
Length = 371
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 61/253 (24%), Gaps = 23/253 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECAS 63
P+ + LD LL + + H L+ AI GGK++R+ L
Sbjct: 12 PADQDRFRAAVADALDRLLAEHRDLARDVHPLTAPLVDAIADLTAGGKRLRAVLAWLGWR 71
Query: 64 LFNVNHLT------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ I S +PS+ + +
Sbjct: 72 AAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRRGMPSVHRRFESLHREAGWRHA 131
Query: 112 DEVTAIIAGNGLLTYAFEI----ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG----- 162
E + A A + + R++ L + G
Sbjct: 132 AEHFGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELERMRFGVMAGQYLDVVAEM 191
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ +++ G ++A A G+ FQ
Sbjct: 192 APAARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLPFGMAFQ 251
Query: 223 LADDLLDCEEDLP 235
DDLL D
Sbjct: 252 YRDDLLGVFGDPA 264
>gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 373
Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 64/253 (25%), Gaps = 23/253 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECAS 63
P+ + LD LL + + H L+ AI GGK++R+ L
Sbjct: 14 PADQDRFRAAVADALDRLLAEHRELARGIHPLTAPLVDAIADLTAGGKRLRAVLAWLGWR 73
Query: 64 LFNVNHLT------------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ I S +PS+ + +
Sbjct: 74 AAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSDTRRGMPSVHRRFESLHREAGWRHA 133
Query: 112 DEVTAIIAGNGL---------LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
E + A +A + +P+ +++ + L +
Sbjct: 134 AEHFGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELARMRFGVMAGQYLDVVAEM 193
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ +++ G ++A A G+ FQ
Sbjct: 194 APAARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLPFGMAFQ 253
Query: 223 LADDLLDCEEDLP 235
DDLL D
Sbjct: 254 YRDDLLGVFGDPA 266
>gi|1146159|gb|AAB07264.1| farnesyl diphosphate synthase short form [Arabidopsis thaliana]
Length = 343
Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 19/249 (7%)
Query: 5 LPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + L+ + ++L DLL + + + + Y + GGK R V +
Sbjct: 1 METDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFK 60
Query: 64 L-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
L + +G IE + Y L+ DD+ MDN RRG+P
Sbjct: 61 LLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQVGMV 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
AI G L + I+ + + + G + + + E
Sbjct: 119 AINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAK 178
Query: 176 QVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
I + +MA + ++ ++GI FQ+ DD LDC
Sbjct: 179 YSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDC 238
Query: 231 EED---LPK 236
D L K
Sbjct: 239 FADPETLGK 247
>gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
Length = 410
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 86/268 (32%), Gaps = 40/268 (14%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECA 62
+ + + DT++ + + ++ ++ LL AI GGK++R+ L
Sbjct: 36 IAEEQRSYLHAFDTLMAEFFTRQRELLEGISSETLPLLEAIESLSTGGKRLRALLSYWGW 95
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHD-----DLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+T R +I + +D RRG P+VH +++
Sbjct: 96 RGAGGAPVTENRTSWSIVKAGMAVELFQTSALIHDDIIDRSDTRRGAPSVHKRFEAAHEQ 155
Query: 118 IA----------------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
+ G+ + ++ E+ +S ++ + L G
Sbjct: 156 NSWRGDAFNYGLTGGILAGDLTMAWSAEVFASLGEGAIYGAPARTIFDRMRTEVLAGQYL 215
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMA--------HASQ--NEK 207
++ + + + + ++CE G +A AS +
Sbjct: 216 DVYSEVLETEDAQAALQRALNVIRFKSAKYSCEHPFTIGGALALQAAVLESGASAVSEQH 275
Query: 208 ERL---RCFGENLGIIFQLADDLLDCEE 232
L R FG LG FQL DD L
Sbjct: 276 PVLAGYRAFGLPLGEGFQLRDDELGVFG 303
>gi|62959215|gb|AAY23715.1| farnesyl diphosphate synthase [Synechococcus sp. WH 6501]
Length = 145
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MDN +RRG+PT HI +DE TAI+AG+ L T AF ++ L D +R ++
Sbjct: 1 HDDMPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLA-EAPGLDDQVRLAMVR 59
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
L G QGM GGQ +D + + Q+ + + KTGAL+ + GA+ A +++
Sbjct: 60 ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
+ L + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVQDDILDVE 145
>gi|112983458|ref|NP_001036889.1| farnesyl pyrophosphate syntase [Bombyx mori]
gi|15991313|dbj|BAB69490.1| farnesyl pyrophosphate syntase [Bombyx mori]
Length = 427
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 68/223 (30%), Gaps = 13/223 (5%)
Query: 24 LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------V 75
L +T H+ + L ++Y + GKK R + +
Sbjct: 103 LTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVM 162
Query: 76 GAAIECIHCYSLIHDDLP---SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
G +E H + L+ +D+ +M G + A + + + T
Sbjct: 163 GWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFN 222
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ P +++++ + +Q ++ F E + + +
Sbjct: 223 TKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQM 282
Query: 192 ACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+M + + +G FQ+ DD LDC D
Sbjct: 283 PVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGD 325
>gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
Length = 518
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 6/185 (3%)
Query: 50 GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK+ R +L+ +L + AAI + DN R GKPT++
Sbjct: 250 GKRWRPYLLAATYLALTGGAEVPDDVQRAAIAVECFHKASLVHDDIQDNDKERYGKPTIN 309
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
Y AI G+ LL + ++S + + + ++L G++ +
Sbjct: 310 ALYGVPIAINVGDILLGEGYRLLSLCDARALTAVAADAHIALCKGQGMELEWSVSPRPLT 369
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+++ I KT + G I A + + + LGI +QL DD+
Sbjct: 370 LDWV-----LEIFCNKTVPAFEVSLVLGLICAGDDEVLRRIFHQYSRALGIAYQLLDDIE 424
Query: 229 DCEED 233
D ++D
Sbjct: 425 DFKDD 429
>gi|148749598|gb|ABR09548.1| farnesyl diphosphate synthase isoform [Hevea brasiliensis]
Length = 342
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 83/243 (34%), Gaps = 16/243 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL- 64
+ L+ ++ ++L LL+ + T + + + + Y + GGK R V + L
Sbjct: 2 ADLKSTFLKVYSVLKQELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
A +G IE + Y L+ DD+ MD+ + RRG+P A
Sbjct: 62 KEGQELTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGLIAA 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ + + + G + + ++ E
Sbjct: 120 NDGILLRNHIPRILKKHFRGKAYYVDLLDLFNEVEFQTASGQIIDLITTLEGEKDLSKYT 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + ++A + + ++ +GI FQ+ DD LDC
Sbjct: 180 LSLHRRIVQYKTAYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFG 239
Query: 233 DLP 235
D
Sbjct: 240 DPE 242
>gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 14/219 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVN 68
Q ++ LD L Q + + + +R+ +L + L L +
Sbjct: 41 QSYWSSVNADLDTHLKQ---AIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGH 97
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ +A+ +H + H++LP D T Y ++ +G++ Y F
Sbjct: 98 RNQAMAAASALRLVHASASTHENLPLTDRPRP--MPRTRPTLYGPNIELLIADGIIPYGF 155
Query: 129 EIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMI 180
E+++ + N + ++ ++ +G QG++ GQ + Q E + +
Sbjct: 156 ELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNV 215
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ K G L A GAI+ S++E E+LR +G +G+
Sbjct: 216 CRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGM 254
>gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5]
gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5]
Length = 302
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 12/225 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ L RI L LL + + + ++ YAL GGK +R L AS+F
Sbjct: 2 ASLASIEDRI-AYLGGLLTRYSGDRVKELFPEIVEEASYALFGGKMLRGTLSLLVASMFT 60
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
L + A+E +H SL+HDD+ D RRG+P+ +Y AI + L+
Sbjct: 61 AQVEKVLPIALAVELMHAASLVHDDIA--DASPTRRGRPSFWSKYGLEDAITVPHVLMPV 118
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
A +++ + + S + +L G+ + + + + KT
Sbjct: 119 AISLVADAGVEAVKESMNAWRRSALGQLWDTRILRGREVPVG--------YEKLIEYKTA 170
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
A+ +C I ++ E R +G G+++Q+ DD D E
Sbjct: 171 AVFEASCTLPLIAIGR-RDIVESGRVYGRFFGLLYQVLDDFSDAE 214
>gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 235
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+++ D I E + KT L A + I+A + +++ L+ +G LG FQL
Sbjct: 63 MNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLI 122
Query: 225 DDLLDCEED---LPK 236
DDLLD D L K
Sbjct: 123 DDLLDYSADGEHLGK 137
>gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 465
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + + Q+ A++AG+ LL A ++ + + + +
Sbjct: 222 HDDVIDNAVTRRSSSSANTQFGNKMAVLAGDFLLGRASVALARLRNPEVIELLATVIANL 281
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ T +KT +L+ +C + A++ +++ + E
Sbjct: 282 VEGEFMQLKNTASDERSPVFTDDTITYYLQKTYLKTASLISKSCRAAALLGNSTPDIVEA 341
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD + K
Sbjct: 342 AYSYGRNLGLAFQLVDDMLDYTVNSAEFGK 371
>gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
Length = 325
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 8/217 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+L + S L Y + GK++R V A + N + A
Sbjct: 16 ELFEEKFSLSMRSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNNGEVNDRTYRGASV 75
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
++ +D+ IRRG +++ + A++ G+ L + +
Sbjct: 76 IELIHTASLVHDDVVDDSNIRRGFFSLNALWKNKIAVLVGDFLFSKGLLLSIDNGDTDLL 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I S + ++ LQ ++ +D + + I + KT L+ C GA
Sbjct: 136 QIISVAVREISEGELLQIEKARKLDITEDLYYE------IIRQKTATLIAACCAMGACAV 189
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
HA E +R+ FGE +G+ FQ+ DDL D + K
Sbjct: 190 HAKDKEVKRMHKFGELIGMAFQIKDDLFDYGTAKIGK 226
>gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb18]
Length = 374
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 131 HDDVIDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALARLRDPEVIELVATVIANL 190
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + T +K+ +L+ +C + A++ H+S E
Sbjct: 191 IEGEFMQLRNTELDEENPFFTEEAITYYLQKTYLKSASLISKSCRAAALLGHSSPEVVEA 250
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD E+L K
Sbjct: 251 AYSYGRNLGLAFQLVDDMLDYTISGEELGK 280
>gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
Length = 345
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 89/239 (37%), Gaps = 22/239 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIRSF 56
L+ + + L + + +T + + Y+ GGK +R
Sbjct: 18 LERCRELVRPALREAVGRT--------HPWVGEMAAYSFGWCEVGGAPTAASGGKGVRQA 69
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L A + + A+E +H +SL+HDD+ MD RR +PTV Y A
Sbjct: 70 LAVLGAEVVGAPARAGVPAAVAVELVHVFSLLHDDI--MDGDVERRRRPTVWKAYGTGPA 127
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++AG+ L A E +++ + L +L E + +
Sbjct: 128 VLAGDALFALAVETLATAEPGASALRTLSAALGELVRGQADDLLFAARPWAGPERVRPAE 187
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + KTGAL+ A GA++ L G LG+ FQ+ DD+L D
Sbjct: 188 YRAMAERKTGALLGCAAALGALLGGGPPAAVAALDRAGRRLGLAFQIVDDVLGIWGDPE 246
>gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
K85]
Length = 335
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 73/208 (35%), Gaps = 15/208 (7%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ ++D L Q M + GGK+ R A + A
Sbjct: 30 EQLMDTELRQADEVMSDSL-------LHLFNAGGKRFRPLFTVLSAQI-GPQPDAAAVTV 81
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A + MD +RRG P+ + Q+ AI+AG+ LL A +++
Sbjct: 82 AGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGP 141
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ R G G ++ Q + + KTG+L+ A G
Sbjct: 142 EAV---RIIADTVAQLVTGQMRETRGTSENV----DSIEQYLKVVQEKTGSLIGAAGRLG 194
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLA 224
+ + A+ + ERL G +G FQ+A
Sbjct: 195 GMFSGATDEQVERLSRLGGVVGTAFQIA 222
>gi|62288317|gb|AAX78434.1| farnesyl diphosphate synthase [Anthonomus grandis]
Length = 438
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 16/244 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ ++ +L + R+ ++Y + GKK R ++ +
Sbjct: 100 RDFMALFPDLVRELTELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILISAYKMLEDPK 159
Query: 70 L---TALRVGAAIECI--HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+++ + + +S MDN RRG + Q + I +L
Sbjct: 160 NLTPENIKLASVLGWCLEMIHSCFLVLDDIMDNSETRRGSLCWYRQNGIGLSAINDGLIL 219
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + + + L + + + + ++F + +
Sbjct: 220 ENAVYTLLKMHLRDHPAYVPIIELFHETVSKTTLGQCLDSMCLDSDGKPKLEMFSMSRYT 279
Query: 185 T-------GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ +A + + + +G FQ+ DD LDC D
Sbjct: 280 SIVKYKTAYYSFHMPVAVAMYLAGMNDPEQHRQAKTILLEMGEFFQIQDDFLDCFGDPAV 339
Query: 234 LPKK 237
KK
Sbjct: 340 TGKK 343
>gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
Length = 282
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 78/219 (35%), Gaps = 24/219 (10%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
ID +++ L +T ++ +Y + GK+ R L+ A
Sbjct: 14 IDELVEKFLKETREW-------EVMEMSKYIMRDGKRFRGTLMFLFNGALGGEEKNAYPG 66
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E +H SL DD+ +D +RRG Y I N L+ A IIS
Sbjct: 67 ALATEILHSASLALDDI--VDYDELRRGMKAAWAVYTNRKVIFVSNYLIPTALNIISGYG 124
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + ++D + + ++KT +L
Sbjct: 125 EKALKISVDLWKDT-------------AVGALKDMYGKDDDYVRTVELKTASLFKLPAML 171
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEED 233
A + + L G+NLGII+Q+ DD +D +D
Sbjct: 172 -ASFSSGKIELLDTLMEIGKNLGIIYQIVDDYVDCVTQD 209
>gi|241994864|gb|ACS74708.1| farnesyl pyrophosphate synthase [Michelia chapensis]
Length = 351
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 14/238 (5%)
Query: 9 LQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA----- 62
L+ ++ L DLL A + + Y + GGK R V +
Sbjct: 13 LRSVFLQVYARLKSDLLQDPAFDWTEDSRQWIDRMLEYNVPGGKLNRGLSVIDSYQLLKD 72
Query: 63 --SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + +G IE + Y L+ DD+ + + + ++ AI G
Sbjct: 73 GQELSEDEIFLSCSLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCW-FRVPKVDMIAINDG 131
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDET 175
L + II + + + + G + + + ++
Sbjct: 132 ILLRNHIPRIIRKNFREKSYYVDLLDLFNEVEFQTASGQMLDLITTHEGEKDLSKYTMPV 191
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++Q +M+ + + ++ +G FQ+ DD LDC D
Sbjct: 192 YCRIVQYKTAYYSFYLPVACALLMSGENLDNFTDVKNILIEMGTYFQVQDDYLDCYGD 249
>gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 182
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
+ KT +L+ FAC+S +I+ + +E +G N+GI FQL DDLLD
Sbjct: 23 FSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGRNVGIAFQLVDDLLDFVSS 82
Query: 231 EEDLPK 236
+ DL K
Sbjct: 83 QSDLGK 88
>gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
HTCC2503]
gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
HTCC2503]
Length = 316
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
+++ L DL+ A R++LL GK+IR+ L A + AL
Sbjct: 31 VESRLADLIPAVGPP---------AEAARHSLLAPGKRIRAVLTLLAARECGGSLERALD 81
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E IH SL+ DDLP+MD+ +RRG+PT H + E TAI+A GLL A+ ++ +
Sbjct: 82 TACAVEMIHTASLVIDDLPAMDDADLRRGRPTCHRAFGESTAILAAIGLLNGAYGVVMAA 141
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ ++ L+ +G +G++ GQ LD+ T + IQ KTG L A
Sbjct: 142 EPLSAAEKT-KIASILSSAVGWRGLVQGQALDL---NPGTTSLETIQDGKTGVLFEAAVL 197
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQ 222
+G A + L F LG +Q
Sbjct: 198 AGEQTAGWVSEKSVALAAFATALGRAYQ 225
>gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb01]
gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
brasiliensis Pb01]
Length = 533
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 290 HDDVIDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALARLRDPEVIELVATVIANL 349
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + +K+ +L+ +C + A++ H+S E
Sbjct: 350 IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSASLISKSCRAAALLGHSSPEVVEA 409
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD E+L K
Sbjct: 410 AYSYGRNLGLAFQLVDDMLDYTISGEELGK 439
>gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03]
Length = 450
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 257 HDDVIDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALARLRDPEVIELVATVIANL 316
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + +K+ +L+ +C + A++ H+S E
Sbjct: 317 IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSASLISKSCRAAALLGHSSPEVVEA 376
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD E+L K
Sbjct: 377 AYSYGRNLGLAFQLVDDMLDYTISGEELGK 406
>gi|255587638|ref|XP_002534338.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
gi|223525465|gb|EEF28044.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
Length = 333
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 15/226 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHLTAL 73
LL A + + + Y + GGK R V + L A
Sbjct: 17 KQLLEDPAFEWTPDSREWVNRMLDYNVPGGKLNRGLSVIDSYQLLKEGQELTEEEIFLAS 76
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIIS 132
+G IE + Y L+ DD+ MD + RRG+P A G L + I+
Sbjct: 77 ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILK 134
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGA 187
+ + + + G + + ++ E + +
Sbjct: 135 NHFRGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYY 194
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+MA + ++ ++ ++GI FQ+ DD LDC D
Sbjct: 195 SFYLPVACALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGD 240
>gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
33323]
Length = 338
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 84/219 (38%), Gaps = 8/219 (3%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
++ + ++ +H+ + L A+ GK +R V + + +
Sbjct: 20 QVQKDMIEISHIILTHVNS-VPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHD 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A ++ +D +R G+P++ +Y + A+ AG+ L+ + ++S
Sbjct: 79 ELQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
Q ++ + +G Q + + I E + K KTG L A
Sbjct: 139 -ENAQSLHSVIADGKTMQNILVG----ETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLA 193
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
C GA + + + + FGE LG FQL DD+LD
Sbjct: 194 CFIGAYESGTKVTKALKTKKFGEYLGQAFQLRDDILDYT 232
>gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2]
gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2]
Length = 289
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
Query: 36 NDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLP 93
RL +AIRYA+ GG +IR L ++ N + AIE +HC SL HDDLP
Sbjct: 24 PPRLAAAIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLP 83
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ RRGKP+VH + E A++AG+ ++ AFE I+ + +
Sbjct: 84 CFDDAPTRRGKPSVHAAFGEALAVLAGDAMIVMAFEAIARAFMDRPHLLPPLVQTIARAA 143
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
G+ GQ + + + + + A A+ + R
Sbjct: 144 GMPSGIAAGQGYESEPQLARSQ-------YQRAKTGSLFVAATVAGALAAGADGAPWRML 196
Query: 214 GENLGIIFQLADDLLDCEE 232
GE LG +Q+ADD+ D
Sbjct: 197 GEGLGEAYQIADDIRDVAS 215
>gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462]
Length = 252
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 43 IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ Y++ GGK++R L+ ++++ AL AA+E +H YSLIHDDLP+MDN +R
Sbjct: 1 MAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
RG+PT H Q+ E AI+AG+ LLT AF I+S + L+ L G GM+
Sbjct: 61 RGQPTNHKQFGEALAILAGDALLTDAFAILSQHYP----EKGAALVQILAEAAGSSGMVA 116
Query: 162 GQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
GQ +D + D + + + KTGAL+ G++ + ++ L F G+
Sbjct: 117 GQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGL 176
Query: 220 IFQLADDLLDC---EEDLPK 236
FQ+ DD+ D +L K
Sbjct: 177 GFQIKDDINDVTKTTAELGK 196
>gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136]
Length = 589
Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 10/207 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
LD LL + + + L A G + R FL + L
Sbjct: 247 LDALLGKPHDRTEEIAREWLARA-------GNRWRPFLTVASYQALREDPEGPLSDDLKK 299
Query: 80 ECIHCYSLIH---DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
I DN R G+ T+H ++ A+ G+ L+ + +++
Sbjct: 300 AAIAVECFHKASLVHDDIEDNDAQRYGEATLHAEHGMPVALNVGDLLIGEGYRLLADSNV 359
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + + +G + + + TQV I + KT A + G
Sbjct: 360 RADYRTAMLKIAAEGQRELCRGQGAELLWNNHPVALSSTQVLEIFRSKTAPAFEVALKIG 419
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQL 223
A ++ +E L + E LGI +Q+
Sbjct: 420 AALSGRLDEVEEALHEYSEALGIAYQI 446
>gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1]
gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1]
Length = 359
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 24/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
M+ + L++ RI ++ D + A + A+ + GGK++R+
Sbjct: 1 MSSS--TDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRAL 58
Query: 57 LVTECAS------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L + + L + A+E +L+HDD+ + R +
Sbjct: 59 LTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALA 118
Query: 111 YDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ I + + + + + + + + GQ+LD+
Sbjct: 119 SGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDL 178
Query: 168 QDEFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLR-CFGENLG 218
E + + E G + A + L G LG
Sbjct: 179 AVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLG 238
Query: 219 IIFQLADDLLDCEE 232
+ FQLADDLLD
Sbjct: 239 LAFQLADDLLDVIG 252
>gi|238882238|gb|EEQ45876.1| farnesyl pyrophosphate synthetase [Candida albicans WO-1]
Length = 351
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 80/247 (32%), Gaps = 16/247 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L ++ + + ++++L S+ M + + + ++ Y GGK R V
Sbjct: 1 MSDKLAAR-ERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVV 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYS-------LIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ ++ N L + MD RRG+P ++
Sbjct: 60 DTFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEG 119
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLD 166
I + +L A I+ + L L + + + +
Sbjct: 120 VNNIAINDSFMLEGAIYILLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIV 179
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLAD 225
D+F E F++ M+ + + +++R LG FQ+ D
Sbjct: 180 DLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQD 239
Query: 226 DLLDCEE 232
D LDC
Sbjct: 240 DYLDCFG 246
>gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
Length = 364
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 80/241 (33%), Gaps = 16/241 (6%)
Query: 11 ENSKRIDTILDDLLLQTAS--HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
E+ RID L + QT Q + A+++ L GGK+IR L +
Sbjct: 21 EDRARIDARLTRVFDQTRRRYACNPQVAPLVEEALKFTLEGGKRIRPRLCLAAYRILTQR 80
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F V +E +H + L+HDDL R + + L
Sbjct: 81 FEPPPAPVWNVAVVLEALHAFMLVHDDLMDQSLTRRDRPTLHERYREGLNVSARTAGDLG 140
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-- 182
A + + + ++ Q + ML L + + + +
Sbjct: 141 IVAGDWMFALAIRMLGRAGLQGTRLARVVRIIAEMLIETGLGQSLDLLHDGRSLESITEE 200
Query: 183 --------MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ GA +A+A + L FG+ LG +Q+ +DL E+DL
Sbjct: 201 DITTLYRWKTARYTVSGPLVLGAALANAPAATRRCLNRFGDLLGFGYQICNDLESLEDDL 260
Query: 235 P 235
Sbjct: 261 E 261
>gi|224808192|gb|ACN63187.1| farnesyl diphosphate synthase [Euphorbia pekinensis]
Length = 342
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 18/244 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S + ++ T +LL TA + + Y + GGK R V +
Sbjct: 2 ADLKSTFLDVYSQLKT---ELLNDTAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSY 58
Query: 63 SL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
L A +G IE + Y L+ DD+ MD + RRG+P
Sbjct: 59 KLLKQGEELTEEEIFLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPKVGM 116
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A G L + I+ + + + G + + ++ E
Sbjct: 117 IAANDGIMLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLN 176
Query: 175 TQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + +MA S + ++ +GI FQ+ DD LD
Sbjct: 177 KYTLSLHRRIVQYKTAYYSFYLPVACALLMAGESLDNHIDVQNILVQMGIYFQVQDDYLD 236
Query: 230 CEED 233
C D
Sbjct: 237 CYGD 240
>gi|68486364|ref|XP_712917.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
gi|68486429|ref|XP_712885.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
gi|46434304|gb|EAK93717.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
gi|46434339|gb|EAK93751.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
Length = 351
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 80/247 (32%), Gaps = 16/247 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L ++ + + ++++L S+ M + + + ++ Y GGK R V
Sbjct: 1 MSDKLAAR-ERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVV 59
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYS-------LIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ ++ N L + MD RRG+P ++
Sbjct: 60 DTFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEG 119
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLD 166
I + +L A I+ + L L + + + +
Sbjct: 120 VNNIAINDSFMLEGAIYILLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIV 179
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLAD 225
D+F E F++ M+ + + +++R LG FQ+ D
Sbjct: 180 DLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQD 239
Query: 226 DLLDCEE 232
D LDC
Sbjct: 240 DYLDCFG 246
>gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
Length = 341
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 84/222 (37%), Gaps = 11/222 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
++ + ++ +H+ + L A+ GK +R V + + +
Sbjct: 20 QVQKDMIEISHIILTHVNS-VPGLLGQALEDTFAVPGKMLRPACVMLFGAFGPDADQKHD 78
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A ++ +D +R G+P++ +Y + A+ AG+ L+ + ++S
Sbjct: 79 ELQKIATSIETLHNATLIHDDIIDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS 138
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
Q ++ + +G Q + + I E + K KTG L A
Sbjct: 139 -ENAQSLHSVIADGKTMQNILVG----ETEQYNNAYNIDISEKEYLDQIKGKTGVLFGLA 193
Query: 193 CESGAIMAHAS-QNEKERLR--CFGENLGIIFQLADDLLDCE 231
C GA + + L+ FGE LG FQL DD+LD
Sbjct: 194 CFIGAYESGTKVTKVTKALKAKKFGEYLGQAFQLRDDILDYT 235
>gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SouthAfrica7]
Length = 307
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKRLKAIQNRIASWIKEIESGFIDTLFSKIGPS--------KMLRSKLMLALLDETTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + ++ M G+ + + I + KT +
Sbjct: 115 ELSKMGE--SIAQILSNAVLRLSRGEIEDMFVGECFNSDKQKYWR-----ILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG + G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDATTLGK 214
>gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
SK46]
gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
SK46]
Length = 370
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 82/264 (31%), Gaps = 29/264 (10%)
Query: 1 MNGGLP-SKLQ--ENSKRIDTILDDLLLQT---ASHMQTQHNDRLLSAIRYALLGGKKIR 54
M+ L + +Q E + L++ L + + + + + S + L GGK++R
Sbjct: 1 MSEELDLAAMQPREVPAAVTKTLENYLKSRGDDVASVDAVYTEAIDSLHSFVLNGGKRVR 60
Query: 55 SFLVTECASLFNVNHLTALR-------------------VGAAIECIHCYSLIHDDLPSM 95
+ + I + P++
Sbjct: 61 PAFAWQGWLGAGGLEGRFSPAEDSPAVMNAVSALELIQACALIHDDIIDDADTRRGAPTI 120
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ + + + I A + A + + +
Sbjct: 121 HKVFEAKHEANSWNGAADRFGISAAILIGDVALTWADDMMHSSGLSSEALTRALVPWRAM 180
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLR 211
+LGGQ+LDI E +++V +K+ + GA +A A E R
Sbjct: 181 RTEVLGGQLLDITAEASRDSRVETAEKINLFKTAAYTIERPLHIGAAIAGAPAELVEAYR 240
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
FG ++G+ FQL DD L D
Sbjct: 241 SFGRDIGVAFQLRDDQLGVFGDPE 264
>gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum]
Length = 343
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+C + A++ A+++ + +G +LG+ FQL DD+LD
Sbjct: 202 SCRATAVLGGATEDVAAKAYSYGRHLGLAFQLVDDVLDYTS 242
>gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
1704]
gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
1704]
Length = 477
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + ++++ A++AG+ LL A ++ + + + +
Sbjct: 234 HDDVIDNAVTRRSGVSANLEFGNKMAVLAGDFLLGRASVALARLRDPEVTELMATVIANL 293
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + T +K+ +L+ +C S A++ H + + E
Sbjct: 294 VEGEFMQLRNTAQDERNPAWTEDIITYYLQKTYLKSASLISKSCRSAALLGHGAPDVVEA 353
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G NLG+ FQL DD+LD E+L K
Sbjct: 354 AYSYGRNLGLAFQLVDDMLDYTISGEELGK 383
>gi|62959171|gb|AAY23693.1| farnesyl diphosphate synthase [Erythrobacter longus]
Length = 147
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
R GK T+H YDE TA++AG+ L AFEI++ T +RS+L+ +L G+ GM
Sbjct: 13 RHGKATLHHVYDEATAVLAGDALHALAFEILADHGTSSDPFVRSELIATLGTASGMNGMA 72
Query: 161 GGQMLDIQDEFIDETQVFMIQKM----KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
GGQM+D+ + T KTGAL+ A E GA++ + LR + +
Sbjct: 73 GGQMMDMVADEEGVTYDLQAITRLQQLKTGALLSCAVEMGAVLGKVPVEGRAHLRAYSRD 132
Query: 217 LGIIFQLADDLLDCE 231
+G+ FQ+ADD+LD E
Sbjct: 133 IGLAFQIADDILDVE 147
>gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
Length = 324
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 8/220 (3%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
I++ L+ S + + + GK +R LV A L+ V
Sbjct: 7 IRTPIESELEAFKELYDSSLSSSNTLLDSVVAHIRQRSGKMMRPILVLLVARLYGVVSPA 66
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
L ++E +H SL+HDD+ +D RRG+ +V+ ++ A++ G+ LL + +
Sbjct: 67 TLHAAVSLELLHNASLVHDDV--VDESTERRGQLSVNAIFNNKVAVLTGDYLLATS---L 121
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ I + + + + + + + KT AL
Sbjct: 122 VHAELTNSHQIIRLVSSLGQDLADGELLQLSNVSNHSFSETVYFD---VIRKKTAALFAA 178
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A S+ E + R GE +GI FQ+ DD+ D
Sbjct: 179 CTAAAAYSVGVSEEEVKLARLLGEYIGICFQIKDDIFDYF 218
>gi|19114211|ref|NP_593299.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe 972h-]
gi|3287843|sp|O14230|FPPS_SCHPO RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|2330860|emb|CAB11097.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe]
Length = 347
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 71/245 (28%), Gaps = 19/245 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQH-NDRLLS----AIRYALLGGKKIRSFLVTECASL- 64
+ + ++ L + + ++++T + D + ++ + LGGK R V + +
Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL 64
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
++ ++ + + + R V I +
Sbjct: 65 LGHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDA 124
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-------QMLDIQDEFIDET 175
+ + K +++ L+ + + +F +
Sbjct: 125 FMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQK 184
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
F++ +A A+ + + LG FQ+ DD LDC D
Sbjct: 185 HSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGDP 244
Query: 234 --LPK 236
K
Sbjct: 245 TVTGK 249
>gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
Length = 317
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ L GK +R L+ + ++ + IE IH S+IHDD+ +DN RRG
Sbjct: 36 FFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELIHTASIIHDDV--IDNSSFRRGF 93
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
T++ ++ A+I G+ + + + + + + +N+ S L+L +G L
Sbjct: 94 LTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFSNLILK-----MSEGELYQID 148
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
+F ++ +I + +SG ++ ++ L+ G +G+ FQ+
Sbjct: 149 FIKNHKFSEKNYKKIIFNKTALLISTCCEQSGKLL--QKKHTLFFLKKIGILIGLSFQIK 206
Query: 225 DDLLDC 230
DDLLD
Sbjct: 207 DDLLDY 212
>gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
Length = 326
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR + + + +E +H SLIHDD+ +D RRG +++
Sbjct: 47 GKYIRPIFIFLITKMLGNICKKTYDLAYLVELMHTASLIHDDV--IDFSTTRRGVLSINA 104
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ TA+I G+ + + + I + NI S+ + ++ Q
Sbjct: 105 IWQNKTAVIFGDYIFSKSLNIAIKNNYKDYLNIISKTIEKMSEGEIFQIEYF------HK 158
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I++ I KT ++ CE GA + + ++ FGE G+ FQ+ DDLLD
Sbjct: 159 MNINKYIYEKIIFKKTAIMIGACCEGGARSINKKKKIILEIKKFGELAGMAFQIKDDLLD 218
Query: 230 CE 231
E
Sbjct: 219 YE 220
>gi|115439441|ref|NP_001044000.1| Os01g0703400 [Oryza sativa Japonica Group]
gi|2073375|dbj|BAA19856.1| farnesyl pyrophosphate synthase [Oryza sativa Japonica Group]
gi|4063829|dbj|BAA36276.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group]
gi|21039025|dbj|BAB92292.2| putative farnesyl pyrophosphate synthetase [Oryza sativa Japonica
Group]
gi|113533531|dbj|BAF05914.1| Os01g0703400 [Oryza sativa Japonica Group]
gi|215692629|dbj|BAG88049.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 353
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 70/241 (29%), Gaps = 14/241 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ E R+ +++L A + + + Y +LGGK R V + +
Sbjct: 16 KAAFAEIYSRLK---EEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGISVIDSFKML 72
Query: 66 NVNHLTALRV---GAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIA 119
+ + + + + MDN RRG+P A+
Sbjct: 73 KGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVND 132
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G L + I+ + + + G L + + E
Sbjct: 133 GIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLT 192
Query: 180 IQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + +++ + + ++ +G FQ+ DD LDC D
Sbjct: 193 VHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDP 252
Query: 235 P 235
Sbjct: 253 E 253
>gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
27678]
gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
27678]
Length = 391
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 24/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
M+ + L++ RI ++ D + A + A+ + GGK++R+
Sbjct: 33 MSSS--TDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRAL 90
Query: 57 LVTECAS------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L + + L + A+E +L+HDD+ + R +
Sbjct: 91 LTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALA 150
Query: 111 YDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ I + + + + + + + + GQ+LD+
Sbjct: 151 SGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDL 210
Query: 168 QDEFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLR-CFGENLG 218
E + + E G + A + L G LG
Sbjct: 211 AVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLG 270
Query: 219 IIFQLADDLLDCEE 232
+ FQLADDLLD
Sbjct: 271 LAFQLADDLLDVIG 284
>gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni]
gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni]
Length = 409
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 11 ENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
++ + + L DL ++ H +RY GK +R LVT A+ N
Sbjct: 63 DSKELLQNALKDLHLIVSEIKHSLCPAFPVFRDLLRYQFESQGKLVRPLLVTLAAACANS 122
Query: 68 NHLTALRVGAAIECI------------------------HCYSLIHDDLPSMDNGYIRRG 103
+ + E ++ +D+ +RRG
Sbjct: 123 HIECNSPLIVRYESPETDDVRNLAYLVSPKQHEIAKIAEMIHTASLIHDDLIDSAAVRRG 182
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
K + + + A++ G+ +LT++ +++ + SQ++ L H +Q
Sbjct: 183 KTSAYKAFGHREAVLGGDFILTHSSRLLAQIGDTGVIAVLSQVIEDLIHGEMMQ-----L 237
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIF 221
+ D+ KT +L+ +C++ A++ SQ + + FGE+LG+ F
Sbjct: 238 APNSDDDDKRFQTYLTKTYRKTASLIANSCKAVAMLTVPTLSQWHIDNMYEFGEHLGMAF 297
Query: 222 QLADDLLDCEEDLP 235
QL DD+LD D
Sbjct: 298 QLIDDVLDFVTDEA 311
>gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
Length = 350
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 4/215 (1%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
+ L ++++ ++ L A+ Y GGK +R + A +F A R AA
Sbjct: 25 KETRLHLDHYLRSGNDAPYLDALLAEYPKRGGKMLRPGICIANALIFGGELTQAARCAAA 84
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H LIHDD+ + + + +
Sbjct: 85 VELLHNALLIHDDVQDESDLRRGLPTLHAQHGVALAINAGDALLFTAFQPLLDAIRPLGA 144
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKMKTGALMCFACESG 196
R + +G ++ + M K M + + G
Sbjct: 145 DLAQRVIEVTIAMARQTAEGQALELGWRDRNVTELTEADYLRMALKKTAWMGMIWPAQLG 204
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+M + + R+ FG LG+ FQ+ DDL +
Sbjct: 205 VLMGGRGRIDPARVVRFGHFLGLAFQIEDDLRNLT 239
>gi|217072134|gb|ACJ84427.1| unknown [Medicago truncatula]
Length = 251
Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 73/227 (32%), Gaps = 15/227 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + Y + GGK R V + L + A
Sbjct: 18 ELLHDPAFEWSEDSRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P + A G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWYRVPKVGMIAANDGVLLRNHIPRILRK 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + ++ E + +
Sbjct: 136 HFKGKPYYVELLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MA + + ++ +G FQ+ DD LDC D
Sbjct: 196 FYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPE 242
>gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
marneffei ATCC 18224]
gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
marneffei ATCC 18224]
Length = 459
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 1/142 (0%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + + Q+ A++AG+ LL A ++ + + + +
Sbjct: 216 HDDVIDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALARLRNPEVIELLATVIANL 275
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ +KT +L+ +C + A++ +++ E
Sbjct: 276 VEGEFMQLKNTASDERSPVFTDDTIAYYLQKTYLKTASLISKSCRATALLGNSTPEIVEA 335
Query: 210 LRCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DD+LD
Sbjct: 336 AYSYGRNLGLAFQLVDDMLDYT 357
>gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
Length = 366
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 29/252 (11%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECAS------ 63
+ ++ LD L + A+ A+R A GGK++R LV
Sbjct: 13 DLAAVEAHLDGALAERAALTSDGGAAVGSWWRAVREACRGGKRVRPALVLAAFHGLRDDA 72
Query: 64 ---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ V A ++ +D +RRG+P + + E
Sbjct: 73 GPGHEEGDPDGGAAVQVAAAFELLHAAFLLHDDVIDGDLVRRGRPNLIAELAEAAHTDGV 132
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM--------------LSLTHNIGLQGMLGGQMLD 166
+ + ++ + L L ++ + G
Sbjct: 133 GSSPAHEWGTAAAVLAGDVLIHAALHAVATADVPAEPRRELLELVDRCLVRTVAGEVADV 192
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQ 222
++ ++ + +M + ++CE+ GAI+A A+ + L G +G +Q
Sbjct: 193 AYAARVEVPRLPDVLRMTSWKTAAYSCEAPLVAGAILAGAAPGARAALADVGRAVGAAYQ 252
Query: 223 LADDLLDCEEDL 234
L DD+L D
Sbjct: 253 LRDDVLGTFGDE 264
>gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. cremoris MG1363]
gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II
[Lactococcus lactis subsp. cremoris MG1363]
gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. cremoris NZ9000]
Length = 319
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 8/229 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + ++ ++ L + SH+ +++D + GGK +R + +
Sbjct: 2 DLKNNFWKDYPALEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+++ L + A++E +H +L+HDD+ +D+ RRG T+ +Y A+ AG+ L
Sbjct: 62 FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
F ++S +L + ++ + GQ+ +
Sbjct: 120 FIAVFRLMSEHSLELSNLTKNIGSIERLLGG-----ELGQLNHHFNLQQTLDDYIENISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L + +++ + +R G N+GI FQ+ DD LD
Sbjct: 175 KTGELFALSASVAPLIS-KNNALTKRAYKIGMNIGISFQIMDDYLDYAS 222
>gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi]
Length = 292
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 19/203 (9%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL------------PSMDN 97
GK +R LV A H++ +I I S +
Sbjct: 11 GKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDNSSGAIRPFLRLGEITELLHTATLV 70
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
V + + +++ + S+++L ++
Sbjct: 71 HDDVMDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGHSRVVLLMS---TAL 127
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGEN 216
L + D D KT +L+ + S A++A + +E FG++
Sbjct: 128 EDLAAGEMMQMDGCFDIESYEQKSYCKTASLIANSLASTAVLAGLPNTAYEEAAAKFGKH 187
Query: 217 LGIIFQLADDLLDCEED---LPK 236
LGI FQ+ DD LD D L K
Sbjct: 188 LGIAFQIVDDCLDITGDDKNLGK 210
>gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Pichia angusta DL-1]
Length = 469
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+KT +LM + S AI+A +++ E FG NLG+ FQ+ DD+LD
Sbjct: 310 FQYYLHKTYLKTASLMSKSSRSAAILAGCNEDVIENCYQFGRNLGLCFQIVDDMLDYT 367
>gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57]
Length = 307
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLNEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------ELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
Length = 286
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
ID +D LLL + R+ A RY GG ++R+ L + A+ N++ +L
Sbjct: 17 EIDAEIDRLLL--------PNPSRVADAARYHFSAGGARVRARLGLDAAATLNLSPQASL 68
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
A E +H SL+HDDL D +RRGKP+V ++ + AI G+ L++ A+ I+
Sbjct: 69 ACAIAPELLHNASLVHDDLQ--DGDAMRRGKPSVWSRFGKNIAISTGDLLISAAYMAIAV 126
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ + + GQ D + I K+G L+
Sbjct: 127 HPYPAL--------ALCAMHDAVSYTIDGQTQDCRSTQPTPEAYVNIAANKSGPLLALPI 178
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I A A E + G L I +Q DD++D +DL K
Sbjct: 179 RLALIAAQAPGQ--ETVVHAGRALAIAYQTLDDIMDRADDLAK 219
>gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 264
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D R G T + + ++I+ G+ LLT AF + +I
Sbjct: 18 FIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECGNLNILSI 77
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S+ L Q D F I KT +L CE+ + ++ A
Sbjct: 78 LSKASHLLVKGEIKQM------KARFDPHTVRENYFDIIGEKTASLFSACCEAASTVSGA 131
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +E ERL+ FG N G+ FQ+ DD+LD +
Sbjct: 132 TNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 164
>gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
Length = 302
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLI 88
+L Y GK+IR LV A N + + + ++
Sbjct: 3 PQLREVSNYLFDERGKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHTAS 62
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
+D +IRRGKPT++ + + AI+ G+ +L+ A +S + + L
Sbjct: 63 LIHDDVIDAAHIRRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNERVV---IVLSQ 119
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEK 207
L + + M G D + F + KT +LM +C++ AI+A +Q
Sbjct: 120 VLDDLVQGEFMQLGSKEDRGERFNHYIKKTF---RKTASLMACSCKAVAILADPLNQFLH 176
Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
+ FG + GI FQL DDLLD
Sbjct: 177 DVAFNFGMHFGISFQLIDDLLDFIA 201
>gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5]
Length = 742
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 67/224 (29%), Gaps = 7/224 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
++ +L + + GGK RS ++ C + + + R
Sbjct: 413 VENVLGRYAMNRGAPADKICETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRY 472
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
A E +H SLI DD+ V + + I
Sbjct: 473 IAVAELLHVGSLIIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLP 532
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGAL 188
+ I L QG+ ++ + + ++ I KTG
Sbjct: 533 PEKASRIYQLYFDVLLAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGA 592
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ C ++ A E + FG LG+ FQ+ DD L+
Sbjct: 593 VGALCSMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG 636
>gi|46367743|dbj|BAD15361.1| farnesyl diphosphate synthase [Lactarius chrysorrheus]
Length = 381
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 64/231 (27%), Gaps = 19/231 (8%)
Query: 21 DDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGA 77
DDLL H M + + ++ Y + GGK R V + ++ + A
Sbjct: 40 DDLLEDFRKHNMPEEAIEYYQRSMDYNVPGGKLNRGMSVVDSVAILKGRELTESEYFQAA 99
Query: 78 AIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ + + MD RRG+P + I +L A +
Sbjct: 100 VLGWAVEWMQAYFLVSDDIMDASITRRGQPCWYRTEGVGFMAINDALILEGAIFQMIRKH 159
Query: 136 TQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ + + L + + + + +F ++
Sbjct: 160 FRKEPFYVDLIDLLHEVSYQTEMGQLVDLITAPEHSVDLSKFSLSRHSTIVIYKTAYYSF 219
Query: 190 CFACESGAIMAHASQNEKE----RLRCFGENL----GIIFQLADDLLDCEE 232
++ ++ ++ G FQ+ DD LD
Sbjct: 220 YLPVALSLLLCGFPAEKQNETDPDFYKIALDILVPLGEYFQIQDDYLDYSG 270
>gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
CD36]
gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
CD36]
Length = 498
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM +C + A+++ + + E FG NLG+ FQ+ DD+LD
Sbjct: 339 FEYYLHKTYLKTASLMSKSCRAAAVLSGSQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 397
>gi|156098771|ref|XP_001615401.1| farnesyl pyrophosphate synthase [Plasmodium vivax SaI-1]
gi|148804275|gb|EDL45674.1| farnesyl pyrophosphate synthase, putative [Plasmodium vivax]
Length = 375
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 68/265 (25%), Gaps = 36/265 (13%)
Query: 5 LPSKLQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + L++ L + +++ L Y LGGK R LV
Sbjct: 16 FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFD---YNCLGGKNNRGILVILIYE 72
Query: 64 ------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + A + IE + L+ DD+ + + + A+
Sbjct: 73 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAV 132
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L +++I + + G + ++
Sbjct: 133 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREI 192
Query: 178 F------------------------MIQKMKTGALMCFACESGAIMAH--ASQNEKERLR 211
++ G ++A +++
Sbjct: 193 DVNNINVPEQPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIE 252
Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
+G FQ+ DD LD D K
Sbjct: 253 DISMLMGEYFQIHDDYLDIFGDSTK 277
>gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 341
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 12/241 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L ++ID ++ L + + + + + L GK++R L+ + +
Sbjct: 2 ELNHYIQKIDEKIETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSYNGYKG 61
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
++ AA I L+ D + R + G L
Sbjct: 62 KNMDDAITFAAAIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYEKSYNSSKLGTDLAIVV 121
Query: 128 FEIISSPK---------TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+I++ ++ + N G +L D+ I +
Sbjct: 122 GDIVAFYIFGILSELKVSESTLKKIVKNFSKCYVNTGFGQLLDILYAGRIDDKIVNEDIP 181
Query: 179 MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCF-GENLGIIFQLADDLLDCEEDLP 235
+ G ++ + ++E G+N GI FQ DD++
Sbjct: 182 EKISELKTAYYTFVYPMLFGYYLSENNIEKEEEKILIVGKNAGIAFQYRDDIIGIFGGDA 241
Query: 236 K 236
K
Sbjct: 242 K 242
>gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
Length = 294
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+RID IL + + + ++ ++ S GKK+RS L+ + A +
Sbjct: 1 MERIDDILKEFVDSLNYPLASEMFSQVSS--------GKKLRSKLILKIAGASEAS---- 48
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + +D+ IRRGKP+++ + +I+ G+ L + F I
Sbjct: 49 --FKLSSVVEIIHLASLLHDDVIDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFNEIV 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ D I + + + D+ + + KT L+ A
Sbjct: 107 KFDMKIADIISDAVCKLSIGELM-------DVELGSSFNADKEKYLKMIYFKTAVLIEAA 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+S AI+A + ++ +G+NLG+ FQ+ DD+LD D
Sbjct: 160 AKSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSDEK 199
>gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 296
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 70/206 (33%), Gaps = 8/206 (3%)
Query: 27 TASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S + DRLL A Y GK IR LV A + A +
Sbjct: 29 EESFIGLWMPDRLLKATYHYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIH 88
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
+ MD IRRG T + Y TA++A + ++ A E
Sbjct: 89 TASLLQDDIMDQQRIRRGVETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFELLN 148
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQ 204
+ L L+ L G+ + KT +L+ + GA +
Sbjct: 149 SSIKLAVGQSLESELSGRDNTTI------DDYLKLIYYKTASLIESSMIVGAYSVNVKDN 202
Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
R+R G +GI FQ+ DD++D
Sbjct: 203 EVISRIRDIGRFVGIAFQVRDDVIDY 228
>gi|315305700|ref|ZP_07875309.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
F6-596]
gi|313625931|gb|EFR95454.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
F6-596]
Length = 169
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 6/152 (3%)
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
+ +D+ +RRG PT+H +Y A+ G+ L F+I+SS + +++ +
Sbjct: 13 HMATLIHDDVVDDSPMRRGIPTIHSKYGRNYAVYTGDYLFCICFKILSSHSSSVENIEFN 72
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + QM + + KT L +C SGA + AS+
Sbjct: 73 SKNIEK-----ILMGELDQMRTSYKMDVTVREYLSRISGKTAQLFALSCYSGAAGSKASR 127
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
+ G LG+ FQ+ DD+LD D
Sbjct: 128 MTVAKCYNIGHYLGMAFQIIDDVLDYTSTDQG 159
>gi|296205499|ref|XP_002749779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
jacchus]
Length = 406
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL + Y +GGK R
Sbjct: 54 MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 113
Query: 55 SFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + MD+ RRG+ +
Sbjct: 114 GLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTRRGQICWYQ 173
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 174 KPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 233
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
D F ++ +++ + MA + E + +G FQ
Sbjct: 234 DNVDLDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 293
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 294 IQDDYLDLFGDPSVTGK 310
>gi|255642257|gb|ACU21393.1| unknown [Glycine max]
Length = 342
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 71/225 (31%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + + Y + GGK R V + L + A
Sbjct: 18 ELLHDPAFEFSDDARNWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFHASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P A G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKK 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + ++ E + +
Sbjct: 136 HFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLTLHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+MA + ++ +G FQ+ DD LD D
Sbjct: 196 FYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDRFGD 240
>gi|326490349|dbj|BAJ84838.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510595|dbj|BAJ87514.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 72/239 (30%), Gaps = 13/239 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
L+ + D +L+D + + + Y + GGK R V + L
Sbjct: 70 ERFLRAYERLKDELLNDR--AFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLL 127
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + + + + + + A N
Sbjct: 128 REGTEVDDEDFYLACVLGWCIEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGLSAIND 187
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FIDE 174
+ + + K K+ ++ L + IGLQ +G + I + +
Sbjct: 188 GVLLKCHVQAIIKRYFKEKFYFMELMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQ 247
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+++ + ++ A ++ L+ +G+ FQ+ DD LDC D
Sbjct: 248 GYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 306
>gi|38684029|gb|AAR27053.1| farnesyl diphosphate synthetase [Ginkgo biloba]
Length = 390
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 12/233 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL-------FN 66
+ +L +L ++ T + + + Y + GGK R V + L
Sbjct: 58 EVYNVLKSQILNDSAFQCTDDARQWIEKMLDYTVPGGKLNRGLSVIDSYRLLKTGKEITE 117
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP----TVHIQYDEVTAIIAGNG 122
+G IE + Y L+ DD+ + + V + ++ +
Sbjct: 118 DEVFLGCVLGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRLPQVGLIAANDGILLRTHI 177
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ P ++ +++ L + + ++ T + ++Q
Sbjct: 178 SRILKLHFQTKPYYVDLCDLFNEVEFQTASGQMLDLITTHEGAIDLAKYKMPTYLRIVQY 237
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+MA + + ++ +G FQ+ DD LDC D
Sbjct: 238 KTAYYSFYLPVACALLMAGENLDNFVAVKNILVQMGTYFQVQDDYLDCFGDPE 290
>gi|14422406|dbj|BAB60822.1| putative FPP synthase 2 [Eucommia ulmoides]
Length = 342
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 74/239 (30%), Gaps = 12/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL- 64
S L+ + ++L LL + T + + + Y + GGK R V + L
Sbjct: 2 SDLKSKFLEVYSVLKSELLNDPAFDFTDDSRLWVERMLDYNVPGGKLNRGLSVIDSFKLL 61
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIA 119
+ + + + + + MD+ + RRG+P A+
Sbjct: 62 KEGKEPTDEEIFLACVLGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVND 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-----DIQDEFIDE 174
G L + I+ + + + G + + ++
Sbjct: 122 GLILRNHIPRILKKHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLP 181
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++Q +M+ + + ++ +G FQ+ DD LDC D
Sbjct: 182 LHHRIVQYKTAYYSFYLPVACALVMSGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGD 240
>gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis]
Length = 634
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 93/248 (37%), Gaps = 32/248 (12%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG---KKIRSFLVTECASL-----F 65
+ ++ + + + T+ L A Y G K++RS ++ AS
Sbjct: 111 ALVRDEIECVTERLRRDIFTEIPA-LERAAEYFFRAGAEGKRLRSTMLLLMASALAPAPA 169
Query: 66 NVNHLTALRVGAAIECIH--------------CYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
++HLT A + +D RRGK +++ +
Sbjct: 170 GLDHLTVDTSPPAEHPPTVRRRQQRIAEITELIHVASLLHDDVIDAAGTRRGKKSLNALF 229
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI+AG+ LL A +++ + + SQ + L LQ + D +
Sbjct: 230 GNKVAILAGDFLLARASVSLAALRNPEAILLMSQSLEHLVAGEILQLTADVEEAASMDHY 289
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ +T KT +LM +C + A++ + +G ++G+ FQL DD++D
Sbjct: 290 MRKTYC------KTASLMANSCRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMDYT 343
Query: 232 ---EDLPK 236
++ K
Sbjct: 344 CSASEMGK 351
>gi|329295597|ref|ZP_08252933.1| Polyprenyl synthetase [Plautia stali symbiont]
Length = 259
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 46 ALLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
L GK+IR L+ A + L + A+E +H SLI DD+PSMDN +RRG
Sbjct: 5 TLAPGKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRG 64
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+P +H +Y E AI+A LL+ AFE+I+ L +++ + L+ +GLQG++ GQ
Sbjct: 65 RPAIHCEYGENVAILAAVALLSRAFEVIA-LAPGLPATHKAEAIAELSSAVGLQGLVQGQ 123
Query: 164 MLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
D+ D + + ++KT L + AI A AS ++RL F ++LG F
Sbjct: 124 FQDLHDGAHSRSPEAITLTNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAF 183
Query: 222 QLADDL--------LDCEEDLPK 236
QL DDL DC +D K
Sbjct: 184 QLLDDLADGSKHTGKDCHQDQGK 206
>gi|238062098|ref|ZP_04606807.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
gi|237883909|gb|EEP72737.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
Length = 384
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 58/214 (27%), Gaps = 20/214 (9%)
Query: 42 AIRYALLGGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
A L GGK++R + A ++ MD
Sbjct: 69 ARDCVLAGGKRVRPTFAYWGWRGAAGGAEPLPAVLPALAALELLHTFALVHDDVMDASDT 128
Query: 101 RRG----------------KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
RRG ++ E A++ G+ + +A +++ +
Sbjct: 129 RRGRPTAHRAAAARHAAAGHTGDPERFGEAVAVLIGDLCMVWADRLLAHATVPPARLLDV 188
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC---FACESGAIMAH 201
+ + G + + + + + KT + + A
Sbjct: 189 RRCYDQMRVETVAGQYLDILGENDAGNWSLDRALRVARYKTASYTVQRPLLFGALLAGAD 248
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A +G +G FQL DDLL D
Sbjct: 249 ADAPLTAAYTRYGLAVGEAFQLRDDLLGVYGDPA 282
>gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 438
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 90/241 (37%), Gaps = 12/241 (4%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFL-VTECA 62
+ ++ + + I + L L +D + Y GK +R L
Sbjct: 92 IKEEIVQIYRIILSELYSNLFFNIKIQLKSDHDYVNKISGHYYSKEGKLVRPSLNFLLSQ 151
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHD--------DLPSMDNGYIRRGKPTVHIQYDEV 114
LF+ +E ++ + + +DN + RRG T H+++
Sbjct: 152 ILFDGTTQEFFEKKDLVEKQRLWAAVIENIHVSSLVHDDIIDNAFTRRGLETAHVKFGHR 211
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A+ +G+ ++ + + IS I S +M G + D
Sbjct: 212 EAVFSGDYIIGRSGQQISRFNDIRMYQIYSHIME--NLTHGEINQANSKRTYKYDLDEII 269
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q + KT +LM F+ + I+ + + +E L F ++LGI FQLADD+LD D
Sbjct: 270 NQYILKTYYKTASLMAFSAQGVGIILNQDFHNQECLFKFAQHLGISFQLADDMLDYTSDS 329
Query: 235 P 235
Sbjct: 330 A 330
>gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
nagariensis]
gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
nagariensis]
Length = 403
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 43/252 (17%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFN----------VN 68
+++ + H + L +A Y GK++R LV +S + V+
Sbjct: 58 EIVSERLRHSVSTGIPALKTAAEYFFRHGMEGKRLRPSLVLLMSSALSPAVPPPEYLQVD 117
Query: 69 HLTALRVGAAIECIHC---------YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A + + +D+ RRG +++ TAI+A
Sbjct: 118 LRPAAEHAPELRRRQQRIAEIAELIHVASLLHDDVIDDAETRRGVVSLNNVMGNKTAILA 177
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ LL A +++ + + SQ++ L +Q + L D +
Sbjct: 178 GDFLLARASVSLAALRNSETVVLMSQVLEHLVSGEIMQMTATSEQLLDLDHY------LA 231
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK------------ERLRCFGENLGIIFQLADDL 227
KT +LM + S A++A + +G +LG+ FQ+ DDL
Sbjct: 232 KTYCKTASLMANSSRSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVDDL 291
Query: 228 LDCEED---LPK 236
LD L K
Sbjct: 292 LDLTGSSSVLGK 303
>gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris SK11]
Length = 319
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 8/229 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + ++ ++ L + SH+ +++D + GGK +R + +
Sbjct: 2 DLKNNFWKDYPALEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+++ L + A++E +H +L+HDD+ +D+ RRG T+ +Y A+ AG+ L
Sbjct: 62 FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
++S +L + ++ + GQ+ +
Sbjct: 120 FIAVIRLMSEHSLELSNLTKNIGSIERLLGG-----ELGQLNHYFNLQQTLDDYIENISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L + +++ + +R G N+GI FQ+ DD LD
Sbjct: 175 KTGELFALSASVAPLIS-KNNALTKRAYKIGMNIGISFQIMDDYLDYAS 222
>gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
23877]
Length = 357
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 72/243 (29%), Gaps = 18/243 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQH-----NDRLLSAIRYALLGGKKIRSFLVTECASL 64
++R D + + ++ ++ + L +L GGK++R L+ E A L
Sbjct: 10 ARCARRFDVLFAEYFETLSATLEAPSFSRFTPECLELLRDLSLRGGKRMRVVLLHEAARL 69
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ L A + +D+ RRG PT + Y E L
Sbjct: 70 VRDEPVDGLDAAALSIELLQTH-GLVHDDLIDDSATRRGGPTTYHAYRERFPRHPQAALG 128
Query: 125 TYA-----------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
++ + ++ + + + + D
Sbjct: 129 LTVLAGDLALALSLRVLLDAELPVEVRQAMVEVQTRAATDTFVGQIADLERDFAPAVPDD 188
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + G + A +E LR + +GI Q+ DD LD
Sbjct: 189 DVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEEELRRYARLVGICGQMRDDYLDLFG 248
Query: 233 DLP 235
D
Sbjct: 249 DAA 251
>gi|2935459|gb|AAC73051.1| farnesyl pyrophosphate synthase [Solanum lycopersicum]
Length = 342
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 15/245 (6%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ L++ + ++L DLL TA + + Y + GGK R V + SL
Sbjct: 2 ADLKKKFLDVYSVLKSDLLEDTAFEFTDDSRKWVDKMLDYNVPGGKLNRGLSVIDSLSLL 61
Query: 66 NVNHL---TALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIA 119
+ +A+ + + + MD + RRG+P + AI
Sbjct: 62 KDGKELTADEIFKASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWYNLEKVGMIAIND 121
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G L + I+ + + + G + + + E
Sbjct: 122 GILLRNHITRILKKYFRPESYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLS 181
Query: 180 IQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
I + +M + ++ ++ ++GI FQ+ DD LDC D
Sbjct: 182 IHRRIVQYKTAYYSFYLPVACALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFADP 241
Query: 234 --LPK 236
L K
Sbjct: 242 EVLGK 246
>gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
GZfos37B2]
Length = 361
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 38/265 (14%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLV 58
MN +L + + L +A + + + + ++ L G GK +R ++
Sbjct: 4 MN-EFEKELAKRGDLVYEYL-----ASARYQERFAPEVIHDSVYLYLDGRRGKSLRPAVL 57
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--------- 109
+ A+ AA E H ++L+HDD+ +D +RRG TVH
Sbjct: 58 LFSCGAAGGDEEIAIPAAAATEVFHTWTLVHDDV--IDRDCMRRGGYTVHEEFRRRGVDL 115
Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
Y AI+AG+ ++ ++S + D ++ + + +L
Sbjct: 116 GYDGDKAAHYGTSLAILAGDVQQGWSVSLLSELAERGVDPAVVLHLIRMMETDVVIMLLS 175
Query: 162 GQMLDIQDEFIDET-----QVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRC 212
GQ+ D+Q ++ + KTGAL FA +GA++ + +
Sbjct: 176 GQIFDVQYSKAPIESLSEAKILGMLWRKTGALYEFAGAAGAMIGLSTTNRENELVRSISQ 235
Query: 213 F-GENLGIIFQLADDLLDCEEDLPK 236
F G G FQL DD+L D K
Sbjct: 236 FTGRC-GTAFQLQDDILGVVGDTKK 259
>gi|218677523|ref|ZP_03525420.1| farnesyltranstransferase protein [Rhizobium etli CIAT 894]
Length = 195
Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 53 IRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+R L + + + + A R AAIE +HC SL+HDDLP DN +RRG+PTVH +
Sbjct: 1 MRPKLCLKVSYVCGEKDPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLF 60
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
E A++ G+ L+ AF+ +S + + + G++ GQ ++
Sbjct: 61 GEPIAVLTGDALIVMAFKYLSLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHV 120
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KTG+L A GA+ + A GE LG +Q+ADD+ D
Sbjct: 121 PI----DRYHHYKTGSLFVAAATCGALASGADP---APWSKVGELLGHAYQIADDIADTV 173
Query: 232 E 232
Sbjct: 174 G 174
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 37/230 (16%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
MN + + + + LD+ + + ++ A+RY+LL GGK+
Sbjct: 65 MNTFNFKDYMIQKASSVHKALDE-------AVYVKSPIKIHEAMRYSLLAGGKR------ 111
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A+ A+E IH SLIHDDLP MDN +RRGKPT H + E A++
Sbjct: 112 -----------SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 160
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---T 175
AG+ LL +AFE +++ + + + + L +IG +G++ GQ++DI +
Sbjct: 161 AGDSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLD 220
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNE--------KERLRCFGENL 217
Q+ I KT AL+ A GA++ S E E+ R F ENL
Sbjct: 221 QLEFIHIHKTAALLEAAVVLGALLGGGSDEEATYPKLMGLEKSREFAENL 270
>gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
India7]
Length = 307
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 25/234 (10%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+LQ +I + + ++ + ++ K +RS L+
Sbjct: 3 EKQLQAIQNKITSWIKEIESSFIDALFSKIGPS------------KMLRSKLMLALLDEK 50
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + +D +RR P+++ + A++ G+ +
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +S + + + L + + D+ + + I + KT
Sbjct: 111 KAFFELSKMG-------EAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKT 163
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M + +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 164 AHFMEASLKSMAILLNKDTKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|241951352|ref|XP_002418398.1| dimethylallyltranstransferase, putative; farnesyl diphosphate
synthetase, putative; farnesyl pyrophosphate synthetase,
putative; geranyltranstransferase, putative [Candida
dubliniensis CD36]
gi|223641737|emb|CAX43698.1| dimethylallyltranstransferase, putative [Candida dubliniensis CD36]
Length = 351
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 19/239 (7%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+R + +DL+ + M + D + ++ Y GGK R V + ++ N
Sbjct: 8 KERFLNVFEDLIKELKQILLSYNMPQEAIDWFIKSLNYNTPGGKLNRGLSVVDTYAILNN 67
Query: 68 NHLTALRVGAAIECIHCYS-------LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L + MD RRG+P ++ I
Sbjct: 68 TTSDKLNDTEYKKVAILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVNNIAIND 127
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDE 174
+ +L A I+ + L L + + + + ++F +
Sbjct: 128 SFMLEGAIYILLKNHFRQDPYYVDLLDLFHEVTFQTELGQLLDLITADEEIVDLNKFSLD 187
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ M+ + + + ++++ LG FQ+ DD LDC
Sbjct: 188 KHSFIVIFKTAYYSFYLPVVLAMYMSGINNEKDLKQVKDILIPLGEYFQIQDDFLDCFG 246
>gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
roseum DSM 5159]
gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
roseum DSM 5159]
Length = 334
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
S+D +RRG+PT++ +D I+ G+ + + + +S + + + S+
Sbjct: 91 HDDSLDGASVRRGQPTLNALFDPSVVIMVGDYMFARSAMLAASTMNPRVLAVFAHCLGSI 150
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + D++ KT +L + E GAI+A A ++ E L
Sbjct: 151 CDGQLRELFAARRTDVSLDDYQHR------IYGKTASLFAGSAEIGAILAEAPDDQIELL 204
Query: 211 RCFGENLGIIFQLADDLLDC 230
R FG +G+ FQ+ DD+LD
Sbjct: 205 RDFGGAMGMAFQIVDDVLDF 224
>gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
Length = 348
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 87/254 (34%), Gaps = 23/254 (9%)
Query: 6 PSKLQENSKRIDTIL----------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
S L + K I+ I D L T + ++ N I GGKKIR
Sbjct: 4 KSFLDKIEKNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPVIEIINRGGKKIRP 63
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEV 114
L+ A N+ + + + +++G RRGKP++H+ Y
Sbjct: 64 MLMILLAHALGYNNSDTENLYKLSMLLELPHSGSLIIDDIEDGALKRRGKPSIHLIYGLD 123
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+I N + ++I + + + T + G L
Sbjct: 124 NSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLSNLHLGQGIDITLHNGTYIPSI 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---- 230
+ + + KT +L A I+ + ++N+ + L N+G FQ+ DD+ +
Sbjct: 184 EEYISLVEHKTSSLFGMAGFLAGILTN-NENKAKNLYNTFLNIGTYFQMIDDIKNIKDGV 242
Query: 231 ----EED---LPKK 237
D KK
Sbjct: 243 KGKDFGDDLIEGKK 256
>gi|3128225|gb|AAC26705.1| putative trans-prenyltransferase [Arabidopsis thaliana]
Length = 297
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 21/206 (10%)
Query: 37 DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+L SA Y G GK+ RS ++ A+ NV D+
Sbjct: 7 PKLASAAEYFFKRGVQGKQFRSTILLLMATALNV------------RVPEALIGESTDIV 54
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
+ + +RG + + + + S + + + + L ++ H
Sbjct: 55 TSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKVVALLATAVEHL 114
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
+ + M + + Q KT +L+ +C++ A++ + +
Sbjct: 115 VTGETMEITSSTEQRYSMDYYMQKTYY---KTASLISNSCKAVAVLTGQTAEVAVLAFEY 171
Query: 214 GENLGIIFQLADDLLDCEE---DLPK 236
G NLG+ FQL DD+LD L K
Sbjct: 172 GRNLGLAFQLIDDILDFTGTSASLGK 197
>gi|115461044|ref|NP_001054122.1| Os04g0657300 [Oryza sativa Japonica Group]
gi|39545740|emb|CAE75966.1| OSJNBa0071I13.18 [Oryza sativa Japonica Group]
gi|113565693|dbj|BAF16036.1| Os04g0657300 [Oryza sativa Japonica Group]
gi|125550054|gb|EAY95876.1| hypothetical protein OsI_17742 [Oryza sativa Indica Group]
Length = 407
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 68/232 (29%), Gaps = 14/232 (6%)
Query: 18 TILDDLLLQTASH---MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLT 71
L LL + + + + Y + GGK R V + L
Sbjct: 76 ERLKSELLNDRAFNFDFTEETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDE 135
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ + + + + + + A N + +
Sbjct: 136 DFYLACVLGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQ 195
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKM 183
+ K K+ ++ L + IGLQ +G + I + + +++
Sbjct: 196 AIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYK 255
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ A ++ L+ +G+ FQ+ DD LDC D
Sbjct: 256 TSYYSFYLPVACALLLNGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPE 307
>gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter hominis ATCC BAA-381]
gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter hominis ATCC BAA-381]
Length = 297
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D IRRG P+++ + A++ G+ + AF + S + I + +
Sbjct: 65 HDDVIDESDIRRGNPSINAVFGSKNAVMLGDIFYSKAFFELCSFNDFISKTISNAVFKLS 124
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ M ++ + + KT L+ + GA +A++ E+
Sbjct: 125 IGELMDVKM-------SENFNKNRENYLTMIYYKTAGLIESVAKIGAFLANSD---CEKF 174
Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
+G+NLG+ FQ+ DD+LD +D K
Sbjct: 175 AEYGKNLGLAFQIIDDILDITQDSKK 200
>gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
Length = 347
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 13/208 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-I 100
AI GGK+IR ++ A + + + + +++
Sbjct: 50 AIEIISRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLK 109
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG +H+ Y +I GN + ++I + + T + G
Sbjct: 110 RRGASAIHLIYGIDNSINTGNLIYFLPAKLIERSNLKENQKLMIYENFFTTLSNLHLGQG 169
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + ++KT +L A AI+ + K+ F LG+
Sbjct: 170 IDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVY 228
Query: 221 FQLADDLLDC--------EED---LPKK 237
FQ+ DD+ + D KK
Sbjct: 229 FQIIDDIKNIKNKINGKEFGDDLLEGKK 256
>gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
Length = 301
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 24/227 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E I + L + S L + L GK +RS L+ S N
Sbjct: 2 VAELIPAIQARIQSFLEEVKS------PQVLK--MVQNLGQGKMLRSQLILAICS----N 49
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
H + A IE I SL+HDD+ +D+ RRG P+++ + AI+ G+ + AF
Sbjct: 50 HPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAF 107
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ ++ L + L + ++ + K+ +L
Sbjct: 108 CELANFSKEIVQ-------LIAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASL 160
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + A++ + R FG + G+ FQ+ DDLLD +
Sbjct: 161 IAASSCGAALLQGLEP---SKYRDFGRHFGMAFQMVDDLLDITQSQE 204
>gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis Il1403]
gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis Il1403]
gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis CV56]
Length = 319
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 8/229 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + ++ ++ L + SH+ +++D + GGK +R + +
Sbjct: 2 DLKNNFWKDYPELEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+++ L + A++E +H +L+HDD+ +D+ RRG T+ +Y A+ AG+ L
Sbjct: 62 FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
F ++S +L + ++ + GQ+ +
Sbjct: 120 FIAVFRLMSEHSLELSNLTKNIGSIERLLGG-----ELGQLNHHFNLQQTLDDYIENISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L + +++ + +R G N+GI FQ+ DD LD
Sbjct: 175 KTGELFALSASVAPLIS-KNNTLTKRAYKIGMNIGISFQIMDDYLDYAS 222
>gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
USDA]
gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
USDA]
Length = 318
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 18/225 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
+++ ++ I+ D L + I+Y GKKIR + + +
Sbjct: 8 KLIKKEISSVNKIIFDQLRSDVQLVNRF--------IKYFNQNSGKKIRPIITLLFSKIL 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ + IE IH +L+HDD+ +D+ IRRG+ I + +++ G+ +
Sbjct: 60 GYRGKKDIIAASLIEFIHIATLLHDDI--IDSSIIRRGRKKSSIVFGNEISVLVGDFVYA 117
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ ++I ++ N+ S+ + + LQ + I + I KT
Sbjct: 118 KSLKMIVGLNSKKVLNLISKTVHMIIEGEILQL-------SNRTLEISQETYMKIIYQKT 170
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+L A + + ++K L+ +G + G FQL +D+ D
Sbjct: 171 SSLFETAAYILTFICNVDSDKKIALKNYGRHFGNAFQLINDIKDY 215
>gi|319949998|ref|ZP_08023982.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
gi|319436340|gb|EFV91476.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
Length = 339
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+C GA++A A + + LR G +LG +Q+ DD+L D
Sbjct: 188 AKTAAYSVCLPLVLGAVLAGAPEEIVDPLRETGRHLGTAYQVVDDVLGVFGDPA 241
>gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH]
gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH]
Length = 348
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 80/233 (34%), Gaps = 17/233 (7%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
D L L S ++T AI GGK+IR L+ A N+ +
Sbjct: 29 DKDLKLKLNIQESTIKTIKAP----AIEIINRGGKRIRPMLMILLAYALGYNNSNTKNLY 84
Query: 77 AAIECIHCYSLIHDDLPSMDNG-YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ + +++G RRGKP +H+ Y +I N + ++I +
Sbjct: 85 KLSMLLELPHSGSLIIDDIEDGAIKRRGKPAIHLIYGLDNSINTANLIYFLPAKLIQTAN 144
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + T + G + + + ++KT +L A
Sbjct: 145 LKTSQQLLIYENFFTTLSNLHLGQGIDIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFL 204
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--------EED---LPKK 237
I+ + ++N+ + L LG FQ+ DD+ + D KK
Sbjct: 205 AGILTN-NENKAKNLYNTFMKLGTCFQIIDDIKNIKDGINGKEFGDDLIEGKK 256
>gi|255018351|ref|ZP_05290477.1| hypothetical protein LmonF_12731 [Listeria monocytogenes FSL
F2-515]
Length = 183
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PK 236
I KTG L+ +A S A +A A + +RLR F EN+GI FQ++DD+LD D K
Sbjct: 65 IHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGK 124
Query: 237 K 237
K
Sbjct: 125 K 125
>gi|84708902|gb|AAI11257.1| FDPS protein [Bos taurus]
Length = 421
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q+ + I+ L + H + RL + Y +GGK R
Sbjct: 69 MNGDQKLDAYAQERQDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNR 128
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 129 GLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQ 188
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + + ++ + + Q L + Q
Sbjct: 189 KPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQ 248
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E + +G FQ
Sbjct: 249 GNVDLGRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQ 308
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 309 IQDDYLDLFGDPSMTGK 325
>gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 471
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+KT +L+ AC S AI++ AS + +G+NLGI FQL DD+L
Sbjct: 306 MINTAFEYYLHKTYLKTASLISMACRSSAILSGASPEVVDSCYEYGKNLGICFQLVDDML 365
Query: 229 DCE---EDLPK 236
D E+L K
Sbjct: 366 DFTVSSENLGK 376
>gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
ER-3]
gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 520
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD E+L K
Sbjct: 379 SCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 426
>gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
SLH14081]
gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
SLH14081]
Length = 520
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+C + A++ H+S E +G NLG+ FQL DD+LD E+L K
Sbjct: 379 SCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 426
>gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
23877]
Length = 352
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 15/241 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFN- 66
R+D +L + + A H+ + + +R A GK++R+
Sbjct: 8 AAFKVRVDGVLRSYVDEEAGHLVAVDDALAPVAEQLRGAAGHGKRLRAAFCYWGWRAAGQ 67
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +R AA+E +H +++HDDL V ++
Sbjct: 68 PDDDALVRAAAAMELVHAAAIVHDDLIDDSPLRHGLPTAHVALEAVLARDGRRRPRAAAR 127
Query: 127 AFEIISSPKTQLKDNI---------RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ ++ + ++ G+ L+I
Sbjct: 128 SLAMLVGDHLMALAGQLFAGSGLPAAYLARARGLWAELARELVAGECLEILHTGGRPDTG 187
Query: 178 ---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+++ + G ++A A +E +G LG FQL DDLL D
Sbjct: 188 TSLKVVRYKTAKYTVEHPLLIGGLLAGAGPGLREAYSAYGLPLGEAFQLRDDLLGLFGDP 247
Query: 235 P 235
Sbjct: 248 E 248
>gi|5678609|emb|CAA08918.2| dimethylallyltransferase [Agrotis ipsilon]
Length = 427
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 62/225 (27%), Gaps = 13/225 (5%)
Query: 24 LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRV 75
L +T H+ + L ++Y + GKK R + N A +
Sbjct: 103 LTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATVLAYKMLEKKENLTPENIHLANMM 162
Query: 76 GAAIECIHCYSLIHDDLPS---MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
G +IE H + L+ +D+ M G K A + + + +
Sbjct: 163 GWSIEMFHTHQLLLNDIMEGAEMRRGAPCWYKHPEVGLSGINDAALIQAAMFSTLKRHFN 222
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT-GALMCF 191
+ ML + + I K KT
Sbjct: 223 NKFFYKSVLETFNEMLLKCSIGHFLENQMAKTDKPDLTLFTMEKYEAITKYKTSYHTFQM 282
Query: 192 ACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+M + + +G FQ+ DD LDC D
Sbjct: 283 PVTLALLMTGVEDPETHRQAKNILLKMGEFFQIQDDFLDCFGDPA 327
>gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30]
Length = 307
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 17/222 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ + + +++ D L S + K +RS L+ + L +
Sbjct: 7 KAIQNKIASWIKEIESGFIDELFS----NIGPSKMLRSKLMLALLNEKTDAILLDKALNL 62
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+ +D +RR P+++ + A++ G+ + AF +S
Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMG-- 120
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ L + + D+ + + I + KT + + +S A
Sbjct: 121 -----ELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMA 175
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 176 ILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
Length = 301
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 24/227 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ E I + L + S L + L GK +RS L+ S N
Sbjct: 2 VAELIPAIQARIQSFLEEVKS------PQVLK--MVQNLGQGKMLRSQLILAICS----N 49
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
H + A IE I SL+HDD+ +D+ RRG P+++ + AI+ G+ + AF
Sbjct: 50 HPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAF 107
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ ++ L + L + ++ + K+ +L
Sbjct: 108 CELANFSKEIVQ-------LIAQSVVELSRGEIKDVQGCLAFNPNKAIYLDTIEDKSASL 160
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + A++ + R FG + G+ FQ+ DDLLD +
Sbjct: 161 IAASSCGAALLQGLEP---SKYRDFGRHFGMAFQMVDDLLDITQSQE 204
>gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22]
gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
scabiei 87.22]
Length = 452
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 20/249 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
++ +P+ ++ + +L + + A+ D R+AL GGK +R V
Sbjct: 68 VDDDVPAAVRRVL---ENLLAERTERAAALDPVFAADLADRVARFALDGGKLMRPRFVWW 124
Query: 61 CASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPS--------------MDNGYIRRG 103
ALRVGAA+E I +L+HDD+ + Y
Sbjct: 125 ALRACGGGAAETEAALRVGAALELIQTCALVHDDVMDASRLRRGRLALHADIAAQYAGGT 184
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
P ++ E AI+AG+ L +A +I+++ T + + + S+ + G
Sbjct: 185 APADGARFGEAAAILAGDLALAWADDIVAATLTTPDTDRAVRELWSVMRTEMVAGQYLDI 244
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ + GA +A A L G +GI FQL
Sbjct: 245 QGQATSSRSLARAIRAACLKSALYSVERPLALGAALAGADAARTRALCSAGRCVGIAFQL 304
Query: 224 ADDLLDCEE 232
DDL D
Sbjct: 305 RDDLGDVFG 313
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
IH SL+HDDLP +DN RRGKPT H Y E A++ G+ LL+ +FE I++ +
Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAI 198
+ +++ L ++G +G++ GQ++DI E D + I KT L+ + GAI
Sbjct: 61 DRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAI 120
Query: 199 MAHASQNEKERLRCFGENLGIIFQLAD 225
M S + E+LR F ++G++FQ+ D
Sbjct: 121 MGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica
Group]
gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group]
Length = 245
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 17/165 (10%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D+ +RRGK T+H Y A++AG+ + + +++ + +
Sbjct: 1 MIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKL 60
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ++ Q + D I + KT +L+ + S AI +
Sbjct: 61 ISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGV 114
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
S E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 115 STAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAK 159
>gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus]
Length = 359
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
+KT AL+ +C AI++ ++ + FG NLGI FQL DD+LD
Sbjct: 284 FEYYIHKTYLKTAALISKSCRCAAILSGSTPAVVDECYDFGRNLGICFQLVDDMLDFTVS 343
Query: 232 -EDLPK 236
+DL K
Sbjct: 344 GKDLGK 349
>gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908]
gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018]
gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017]
Length = 307
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+
Sbjct: 3 EKRLKAIQNKIASWIKEIESGFIDELFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG + G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGK 214
>gi|62959217|gb|AAY23716.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP839]
Length = 145
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MDN +RRG+PT HI +DE TAI+AG+ L T AF ++ L D +R ++
Sbjct: 1 HDDLPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLA-EAPGLDDQVRLAMVR 59
Query: 149 SLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
L G QGM GGQ +D + + Q+ + + KTGAL+ + GA+ A +++
Sbjct: 60 ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119
Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
+ L + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVHDDILDVE 145
>gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
17393]
gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
17393]
Length = 324
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
F + + KT L +SGA+ + + E R FGE +G+ FQ+ DD+ D D K
Sbjct: 164 YFDVIRKKTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFDYY-DSKK 222
>gi|58267962|ref|XP_571137.1| isoprenoid biosynthesis-related protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134112405|ref|XP_775178.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257830|gb|EAL20531.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227371|gb|AAW43830.1| isoprenoid biosynthesis-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 374
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 56/239 (23%), Gaps = 16/239 (6%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
R + + D + + ++ M + + + GGK R V + +
Sbjct: 28 AARRARFEKVFDQIAEELLTYVKGEGMPKDAVEWYQKVLYHNTPGGKLNRGMSVVDTVEI 87
Query: 65 FNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ C+ + + + R + V I +
Sbjct: 88 LKGRELSEEEYTNAAILGWCVELLQAYFLVADDIMDQSVTRRGQPCWYRVPNVGNIAIND 147
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDE 174
+ A K LM + + ++F E
Sbjct: 148 AFMLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLVDLITAPEDHVDLNKFSLE 207
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLADDLLDCEE 232
++ M+ L LG FQ+ DD LDC
Sbjct: 208 KHHLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKILLPLGEYFQVQDDYLDCYG 266
>gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
RC341]
Length = 243
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D +RRGK T + + +++ G+ + T +F++++ + + S + +
Sbjct: 3 HDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVI 62
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
Q M + + KT L A + GAI+ AS + +
Sbjct: 63 AEGEVQQLMNCNDPDTTE------ASYMQVIYSKTARLFEAATQIGAILCDASPEVELAM 116
Query: 211 RCFGENLGIIFQLADDLLDCEED 233
+ +G+ LG FQL DD++D D
Sbjct: 117 QNYGKYLGTAFQLIDDVMDYTSD 139
>gi|165934064|gb|ABY74558.1| farnesyl diphosphate synthase (predicted) [Callithrix jacchus]
Length = 353
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 18/251 (7%)
Query: 1 MNGGLPSKL--QENSKRID--TILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIR 54
MNG S + QE + + + +L + + RL + Y +GGK R
Sbjct: 1 MNGDQKSDVYAQEKQDFVHHFSEIVRVLTEDEMEHPETGDAIARLKEVLEYNAIGGKYHR 60
Query: 55 SFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
+V + MD+ RRG+ +
Sbjct: 61 GLMVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q + Q
Sbjct: 121 KPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTPDFITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
D F ++ +++ + MA + E +G FQ
Sbjct: 181 DNVDLDRFTEKRYKSIVKYKMAFYSFYLPVAAAMYMAGIDGEKEHANANEILLEMGEFFQ 240
Query: 223 LADDLLDCEED 233
+ DD LD D
Sbjct: 241 IQDDYLDLFGD 251
>gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135]
gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135]
Length = 348
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 89/254 (35%), Gaps = 23/254 (9%)
Query: 6 PSKLQENSKRIDTIL--DDLL-------LQTASHMQTQHNDRLLS-AIRYALLGGKKIRS 55
S L + K I+ I D L L+ ++Q + + AI GGK+IR
Sbjct: 4 KSFLDKIEKNINNIFSQDHFLNLFKDKDLKLKLNIQKNTIKTIKAPAIEIINRGGKRIRP 63
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG-YIRRGKPTVHIQYDEV 114
L+ A N + + + +++G RRGKP +H+ Y
Sbjct: 64 MLMILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIEDGAIKRRGKPAIHLIYGLD 123
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+I N + ++I + K + + T + G L +
Sbjct: 124 NSINTANLIYFLPAKLIQTSKLKKSQKLLIYENFFTTLSNLHLGQGIDIALHNGTYIPNL 183
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---- 230
+ + ++KT L A I+ + ++++ + L LG FQ+ DD+ +
Sbjct: 184 DEYISLVELKTSCLFGMAGFLAGILTN-NESKAKNLYNTFLKLGTCFQIIDDIKNIKDGI 242
Query: 231 ----EED---LPKK 237
D KK
Sbjct: 243 NGKDFGDDLIEGKK 256
>gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
Length = 337
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 79/254 (31%), Gaps = 35/254 (13%)
Query: 1 MNGGLPSKLQENSK---RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M+G + + L E S+ RID L ++L A + GK++R+
Sbjct: 1 MDGIVHTFLAEESRQLLRIDQALR------------PVAEQLRRAAAH----GKRLRAAF 44
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
AL AA + + +D+ +R G PTVH+
Sbjct: 45 CYWGWRAAGQPDSEALLRAAASLELVHAAATV-HDDLIDDSPLRHGLPTVHVALRSALTG 103
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ------------ML 165
G + ++ + L G +L
Sbjct: 104 RPRAGAVARDLAMLVGDHLMALAGRLFADCGLPAAYLARARTLWGDLARELIAGECLEIL 163
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+T + +I+ + GA++A A+ + + +G LG FQL D
Sbjct: 164 HTGGRPDTDTSLKVIRYKTAKYTVEQPLLLGALLAGAAPDLRAGFSAYGLPLGEAFQLRD 223
Query: 226 DLLDCEED---LPK 236
DLL D K
Sbjct: 224 DLLGLFGDPVHTGK 237
>gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
Length = 339
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 69/190 (36%), Gaps = 12/190 (6%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
A GGK +R LV CA A+ A+E +H +SL+HDD+ D
Sbjct: 58 ATDGGKALRPALVLLCAEAAGGEAADAVPAAVAVELVHNFSLLHDDVMDGD--------- 108
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
T + + ++S L + + + + L +
Sbjct: 109 TTRRHRATAWTVFGTGPAVLAGDALLSLAFEVLAPSGAANAKVLSAATLALLEGQAADLD 168
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
Q + + + + + KT AL+ AC GA A +R FG +G+ FQ D
Sbjct: 169 FEQRDDVTPGECIRMAEGKTAALLGAACTLGATSGPAG---ADRFGAFGRAVGLAFQHVD 225
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 226 DLLGIWGDPA 235
>gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A]
Length = 307
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A+I G+ + AF
Sbjct: 55 LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVILGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------ELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM + + A+++ A + + FG NLG+ FQ+ DD+LD
Sbjct: 316 FEYYLHKTYLKTASLMSKSARAAAVLSGAQDDVVQNCYDFGRNLGLCFQIVDDMLDYTS 374
>gi|118138423|pdb|2IHI|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138424|pdb|2IHI|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138425|pdb|2IHI|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|118138426|pdb|2IHI|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662582|pdb|3MAV|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662583|pdb|3MAV|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662584|pdb|3MAV|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
gi|294662585|pdb|3MAV|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
Pyrophosphate Synthase (Pv092040)
Length = 395
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 68/265 (25%), Gaps = 36/265 (13%)
Query: 5 LPSKLQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + L++ L + +++ L Y LGGK R LV
Sbjct: 36 FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFD---YNCLGGKNNRGILVILIYE 92
Query: 64 ------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + A + IE + L+ DD+ + + + A+
Sbjct: 93 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 152
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L +++I + + G + ++
Sbjct: 153 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREI 212
Query: 178 F------------------------MIQKMKTGALMCFACESGAIMAH--ASQNEKERLR 211
++ G ++A +++
Sbjct: 213 DVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIE 272
Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
+G FQ+ DD LD D K
Sbjct: 273 DISMLMGEYFQIHDDYLDIFGDSTK 297
>gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24]
gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24]
Length = 364
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 70/243 (28%), Gaps = 26/243 (10%)
Query: 20 LDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L+D L S M +Q D L+ +I + GGK++R+ + V A
Sbjct: 22 LNDFLATRQSVMSAISQDIDPLMGSISNLVTGGKRLRALMCYWGWRGAGGEAAATEVVTA 81
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD---EVTAIIAGNGLLTYAFEII--- 131
+ +D RRG P+VH ++ E + +A I+
Sbjct: 82 GSALELFQAAALIHDDIIDRSDTRRGGPSVHRRFSQLHEDQGWALDSERFGHAAAILTGD 141
Query: 132 ---------------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ I + + + L +
Sbjct: 142 LCLSFSEETFTDIGEAAASGSQARLIFNLMRAEVMAGQYLDILEEVAGPMRDRAGAVSRA 201
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+I+ G +A AS F LG FQL DD+L D
Sbjct: 202 QSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAFALPLGEAFQLRDDVLGVFGDPVT 261
Query: 234 LPK 236
K
Sbjct: 262 TGK 264
>gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis AMD]
gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase
[Gardnerella vaginalis AMD]
Length = 368
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 77/253 (30%), Gaps = 24/253 (9%)
Query: 3 GGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ S++ S++ +T L+D L T + Q + AI + GGK +R+ L
Sbjct: 12 NDIESRITFLISQQFNTGLEDNLSSTCAQTLQQV---IKQAIV-SSEGGKLLRALLTISA 67
Query: 62 A-------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN-GYIRRGKPTVHIQYDE 113
++ ++ + + A+E +LIHDD+ + +
Sbjct: 68 FYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDIIDESYLRRGKPSAYCALSKACN 127
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
I G GL+ S L G +
Sbjct: 128 NKHIGTGLGLMLGDLLATESFDIARNCAKNFTYGEELLAAFASMQRNVGIGQVLDLSIEM 187
Query: 174 ETQVFMIQ----------KMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQ 222
IQ G + A+ E L G +LG+ FQ
Sbjct: 188 MQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQ 247
Query: 223 LADDLLDCEEDLP 235
+ADDLLD D
Sbjct: 248 IADDLLDIVSDSK 260
>gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32]
Length = 307
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIREIESGFIDELFSKIGPS--------KMLRSKLMLALLNEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAKALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
Length = 357
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 67/238 (28%), Gaps = 18/238 (7%)
Query: 15 RIDTILDDLLLQTASHMQTQH-----NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
R + + + + D + +L GGK++R L+ E A L
Sbjct: 15 RFNARFAEYFDTLGTALDAPAFSRFTPDCVGLLRDLSLRGGKRMRVVLLHEAARLVTAEP 74
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-- 127
+ L A + +D+ RRG PT + Y E L
Sbjct: 75 VDGLDAAALSIELLQTH-GLVHDDLIDDSATRRGGPTTYYAYRERFPGRPRAALGLTVLA 133
Query: 128 ---------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
++ + ++ + + + + E
Sbjct: 134 GDLALALSLRVLLEAELPVAVRQAMVEVQTRAATDTFVGQIADLERDFTAAVPDAEMLHD 193
Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + G + A A ++ LR + +GI Q+ DD LD D
Sbjct: 194 VADHKTARYSVLAPMRLGLLAAGAEPGAHEDELRRYARLVGICGQMRDDWLDLFGDEG 251
>gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase
[Campylobacter concisus 13826]
Length = 297
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ ++ +E + + KT L+ GA +A + +G+NLG+
Sbjct: 128 MMDVKMAENFNENEQEYLKMIYYKTAVLIEATAICGAKLAGKDSE---KFGLYGKNLGLA 184
Query: 221 FQLADDLLDCEEDLP 235
FQ+ DD+LD +D
Sbjct: 185 FQIVDDILDITQDEK 199
>gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum]
Length = 386
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 59/279 (21%), Gaps = 45/279 (16%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLGGKKIRSFLV 58
L K +E + ++ D + + + Y L GK+IR LV
Sbjct: 3 TADLHIKFREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLV 62
Query: 59 TECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
N + +L I + + +
Sbjct: 63 VLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHLTQAN 122
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G+ ++S+ + Q ++L + +
Sbjct: 123 LNRGLIGINDGLHLVLSAKYVIHSLFFQYQDTVNLHMWKDQNNVCLKLCKLFDEISYKTC 182
Query: 176 QVFMI--------------------------------------QKMKTGALMCFACESGA 197
+ G
Sbjct: 183 SGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKTGLYSFYLPVACGM 242
Query: 198 IMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+A E ++ LG FQ DD LDC D
Sbjct: 243 ILAEVDIDGIFENVQHILLRLGNYFQAQDDYLDCFGDSE 281
>gi|296194290|ref|XP_002744865.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
jacchus]
Length = 372
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 75/253 (29%), Gaps = 18/253 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + QE + I+ L H +T L + Y +GGK R
Sbjct: 20 MNGDQKSDVYAQEKQEFIQHFSQIVRVLTKDEMGHPETGDAIAWLKEVLEYNTIGGKYHR 79
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 80 GLTVLVAFRELVEPRKQDADSLQRALTVGWCVELLQAFFLMTDDIMDSSLTRRGQICWYQ 139
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQ 163
+ I LL + + + + L L L + + + Q
Sbjct: 140 KPGVGLDAINDAILLEACVYRLLKLYCREQPYYLNLLELYLQSSYQTEIGQTLDLITAPQ 199
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
D F ++ +++ + + +A + E + +G FQ
Sbjct: 200 DNVDLDRFTEKRYKSIVKYKTAFYSVYLPVAAAMYIAGIDGEKEHANAKKILLKMGEFFQ 259
Query: 223 LADDLLDCEEDLP 235
+ DD LD DL
Sbjct: 260 IKDDYLDLFGDLS 272
>gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980]
gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 220
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + +K+ +L+ +C + A++ + + +G+NLG+ FQL D
Sbjct: 53 NPVWTEETISYYLQKTYLKSASLISKSCRAAALLGGSDAVTVDAAYDYGKNLGLAFQLVD 112
Query: 226 DLLDCE 231
D+LD
Sbjct: 113 DMLDYT 118
>gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
Length = 269
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + V A+E IH SL+HDD+ +D ++RRG TV+ ++ + A+
Sbjct: 1 MLLAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAM 58
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G+ L + E I++ + S +L + Q D + +
Sbjct: 59 YTGDYLFAKSLECITNIEIPEAHQALSHTILEVCKGEIEQI------KDKYNYDQNLRTY 112
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
K KT L+ +C+ GAI A A+++ RL +G +G+ +Q+ DD+LD K
Sbjct: 113 LRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 171
>gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 6/217 (2%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ M T L A Y +G GK+ R ++ ++L + L+
Sbjct: 17 RVVANRMRSMVTAEVSVLSLAAEYFFKMGVEGKRFRPTVLLLMSTLLMTSPAHGLQDLIF 76
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ I + + + + H + + I + +
Sbjct: 77 DDLRFRQQRIAEIIEMIHVASLLHDDVLDHADTRRGISSLNHAMGNKVCAAIFLLARASV 136
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL---MCFACES 195
+ + + L+ ++ G+++ + E+ + + +I M +C+S
Sbjct: 137 TLSSLRNTQVVELLSQVLEHLVTGEIMQLSSEYKNMSNFDVISWKTFYKTASLMANSCKS 196
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A++A + R +G +LG+ +QL DD L+
Sbjct: 197 IAVLAGQPEEVANRAFDYGRHLGLAYQLVDDALNYTG 233
>gi|170785230|pdb|3CC9|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785231|pdb|3CC9|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785232|pdb|3CC9|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|170785233|pdb|3CC9|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|215794781|pdb|3EZ3|A Chain A, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794782|pdb|3EZ3|B Chain B, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794783|pdb|3EZ3|C Chain C, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|215794784|pdb|3EZ3|D Chain D, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|298508704|pdb|3MYS|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508705|pdb|3MYS|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508706|pdb|3MYS|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|298508707|pdb|3MYS|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Dipho
gi|312207872|pdb|3LDW|A Chain A, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207873|pdb|3LDW|B Chain B, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207874|pdb|3LDW|C Chain C, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312207875|pdb|3LDW|D Chain D, Crystal Structure Of Plasmodium Vivax
Geranylgeranylpyrophosphate Synthase Pvx_092040 With
Zoledronate And Ipp Bound
gi|312208197|pdb|3PH7|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208198|pdb|3PH7|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208199|pdb|3PH7|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
gi|312208200|pdb|3PH7|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
Pyrophosphate Synthase In Complex With Geranylgeranyl
Diphosphate
Length = 396
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 68/265 (25%), Gaps = 36/265 (13%)
Query: 5 LPSKLQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + L++ L + +++ L Y LGGK R LV
Sbjct: 37 FRNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFD---YNCLGGKNNRGILVILIYE 93
Query: 64 ------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + A + IE + L+ DD+ + + + A+
Sbjct: 94 YVKNRDINSSEWEKAACLAWCIEILQAAFLVADDIMDKGEMRRNKYCWYLLKDVETKNAV 153
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L +++I + + G + ++
Sbjct: 154 NDVLLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREI 213
Query: 178 F------------------------MIQKMKTGALMCFACESGAIMAH--ASQNEKERLR 211
++ G ++A +++
Sbjct: 214 DVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIE 273
Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
+G FQ+ DD LD D K
Sbjct: 274 DISMLMGEYFQIHDDYLDIFGDSTK 298
>gi|29135293|ref|NP_803463.1| farnesyl pyrophosphate synthase [Bos taurus]
gi|75054285|sp|Q8WMY2|FPPS_BOVIN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|18087503|gb|AAL58886.1|AF461050_1 farnesyl diphosphate synthase [Bos taurus]
gi|151557019|gb|AAI49573.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[Bos taurus]
gi|296489639|gb|DAA31752.1| farnesyl pyrophosphate synthetase [Bos taurus]
Length = 353
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q+ + I+ L + H + RL + Y +GGK R
Sbjct: 1 MNGDQKLDAYAQERQDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + + ++ + + Q L + Q
Sbjct: 121 KPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 181 GNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSMTGK 257
>gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum]
Length = 386
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 72/279 (25%), Gaps = 45/279 (16%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLGGKKIRSFLV 58
L K +E + ++ D + + + Y L GK+IR LV
Sbjct: 3 TADLHIKFREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLV 62
Query: 59 TECA---SLFNVNHLTALRVGAAIECIHC--YSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
N + +L I ++ +DN +RRG+P H+
Sbjct: 63 VLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHLTQAN 122
Query: 114 ------------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
I + + +L +++
Sbjct: 123 LNRGLIGINDGLHLVLSAKYVIHSLFFQNQDTVNLHMWKDQNNVCLKLCKLFDEISYKTC 182
Query: 156 L-------------QGMLGGQMLDIQDEFIDETQVFMI-----QKMKTGALMCFACESGA 197
Q +L G+ ++ + + G
Sbjct: 183 SGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKTGLYSFYLPVACGM 242
Query: 198 IMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+A E ++ LG FQ DD LDC D
Sbjct: 243 ILAEVDIDGIFENVQHILLRLGNYFQAQDDYLDCFGDSE 281
>gi|326516466|dbj|BAJ92388.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 13/239 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
L+ + D +L+D + + + Y + GGK R V + L
Sbjct: 70 ERFLRAYERLKDELLNDR--AFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLL 127
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI---RRGKPTVHIQYDEVT 115
+ + A +G IE + +L+ DD+ K
Sbjct: 128 REGTEVDDEDFYLACVLGWCIEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGLSAIND 187
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
++ + ++ + T + ++
Sbjct: 188 GVLLKCHVQAIIKRYFKEKFYFMELMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQ 247
Query: 176 QVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
I K KT + ++ A ++ L+ +G+ FQ+ DD LDC D
Sbjct: 248 GYRRIVKYKTSYYSFYPPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 306
>gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member
(coq-1)-like [Oryctolagus cuniculus]
Length = 512
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 42/201 (20%)
Query: 38 RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECI-----HCYSLIHDD 91
L Y G GK R +V A N++H + V A+ I ++
Sbjct: 247 ELKEMSEYYFDGKGKAFRPVIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVH 306
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+D+ RRGK TV+ + E I
Sbjct: 307 DDVIDDASSRRGKHTVNKIWGEKKVIEDLVRG---------------------------- 338
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ + G + + F + KT +L+ +C++ +++ E
Sbjct: 339 -----EFLQLGSKENENERFAHYLEKTF---KKTASLIANSCKAVSVLGCPDPVVHEIAY 390
Query: 212 CFGENLGIIFQLADDLLDCEE 232
+G+N+GI FQL DD+LD
Sbjct: 391 QYGKNVGIAFQLIDDVLDFTS 411
>gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL
J1-208]
Length = 248
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+ T+ ++ A+ G+ L + E ++ K + S + + L+ Q
Sbjct: 22 RRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTQIKDVAAHKMLSHVTVELSTGEIEQL-- 79
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
D + K KT L+ +C G +++ S+ + ++L FG +G+
Sbjct: 80 ----KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMA 135
Query: 221 FQLADDLLDCEE---DLPK 236
FQ+ DD+LD +L K
Sbjct: 136 FQITDDVLDFVGTEKELGK 154
>gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
Length = 359
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 24/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
M+ + L++ RI ++ D + A + A+ + GGK++R+
Sbjct: 1 MSSS--TDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRAL 58
Query: 57 LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L + F + A+E +L+HDD+ + R +
Sbjct: 59 LTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALA 118
Query: 111 YDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ I + + + + + + + + GQ+LD+
Sbjct: 119 SGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDL 178
Query: 168 QDEFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLR-CFGENLG 218
E + + + G + A + L G LG
Sbjct: 179 AVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLG 238
Query: 219 IIFQLADDLLDCEE 232
+ FQLADDLLD
Sbjct: 239 LAFQLADDLLDVIG 252
>gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
Length = 347
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 23/252 (9%)
Query: 8 KLQENSKRIDTIL----------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
L++ K I+ I D+ L T + + AI GGK+IR +
Sbjct: 6 FLKKIEKNINKIFSTTNFLNLFKDNDLKFTFKIKKKTLDYIKAPAIEIVNRGGKRIRPMI 65
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTA 116
+ A + + + + +++ RRG+ +H+ Y +
Sbjct: 66 MILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGESAIHLIYGIDNS 125
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I AGN + ++I + + T + G + +
Sbjct: 126 INAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDIKFHNESYIPSIKE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC------ 230
+ ++KT +L A AI+ + K+ F LG+ FQ+ DD+ +
Sbjct: 186 YISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVYFQIIDDIKNIKNKING 244
Query: 231 --EED---LPKK 237
D KK
Sbjct: 245 KEFGDDLLEGKK 256
>gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
Length = 347
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 23/252 (9%)
Query: 8 KLQENSKRIDTIL---------DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFL 57
L+ K I+ I D L+ ++ + D + + AI GGK+IR +
Sbjct: 6 FLKNIEKNINKIFSTTNFLNLFKDNDLKFTFKIKKETLDYIKAPAIEIVNRGGKRIRPMI 65
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTA 116
+ A + + + + +++ RRG +H+ Y +
Sbjct: 66 MILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAIHLIYGIDNS 125
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I AGN + ++I + + T + G + +
Sbjct: 126 INAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDIKFHNESYIPSIKE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC------ 230
+ ++KT +L A AI+ + K+ F LG+ FQ+ DD+ +
Sbjct: 186 YISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVYFQIIDDIKNIKNKING 244
Query: 231 --EED---LPKK 237
D KK
Sbjct: 245 KEFGDDLLEGKK 256
>gi|296198711|ref|XP_002746822.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
jacchus]
Length = 372
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 68/256 (26%), Gaps = 20/256 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL ++Y +G K R
Sbjct: 21 MNGDQKSDVYAQEKQDFVQHFSQIVRVLNEDEMGHPETGDAIARLKEVLKYNAIGSKYHR 80
Query: 55 SFLVT-ECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
V L A + + + +
Sbjct: 81 GLTVLVAFWELVKPRKQDAESLQRALTVGWCVELLQAFFLVTDDIMDSSLTHWKQICWYQ 140
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQM 164
+ A N + I + K + ++ L Q ++
Sbjct: 141 KPGVGLDAINDAILLEACIYTLLKLYCQKQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 200
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQL 223
++ E + I K K + MA + E + +G FQ+
Sbjct: 201 KNVGLGRFTEKRYKSIVKYKMAFYFYLPVATAMYMAGTDSEKEHANAKKILLEMGEFFQI 260
Query: 224 ADDLLDCEED---LPK 236
DD LD D K
Sbjct: 261 QDDYLDLFGDPSVTGK 276
>gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative
(AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans
FGSC A4]
Length = 456
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + +I++ A++AG+ LL A ++ + + + +
Sbjct: 213 HDDVIDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 272
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +KT +L+ +C + A++ H++ + E
Sbjct: 273 VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEA 332
Query: 210 LRCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DD+LD
Sbjct: 333 AYSYGRNLGLAFQLVDDMLDYT 354
>gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
Length = 1092
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
+DN RR + +I++ A++AG+ LL A ++ + + + +
Sbjct: 842 HDDVIDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 901
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +KT +L+ +C + A++ H++ + E
Sbjct: 902 VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEA 961
Query: 210 LRCFGENLGIIFQLADDLLDCE 231
+G NLG+ FQL DD+LD
Sbjct: 962 AYSYGRNLGLAFQLVDDMLDYT 983
>gi|167519034|ref|XP_001743857.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777819|gb|EDQ91435.1| predicted protein [Monosiga brevicollis MX1]
Length = 346
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 61/245 (24%), Gaps = 13/245 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + + + +D I+ + + + + + Y GGK R V
Sbjct: 1 MAADKEAFVDLFPRLVDEIIHGVEQEYPDYDKGAIA-WFRRVLEYNCPGGKMNRGLSVLT 59
Query: 61 CAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + + + E
Sbjct: 60 TFRHLVAPREPTDQEIEQCNILGWCIEWLQAFFLVADDIMDGSVTRRGQPCWYKQENVGT 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQD 169
+A N I K K +L L Q + + + D
Sbjct: 120 VAINDSFLIEAAIYKLLKKHFKSTPVYVDLLELMLETTYQTELGQLLDLITAPEDQVVLD 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLL 228
F E +++ ++A + + +GI FQ+ DD L
Sbjct: 180 RFTIEKHTNIVKYKTAFYSFYLPVAMAMLLAGVKDEQAFANAKDILLEMGIFFQVQDDYL 239
Query: 229 DCEED 233
DC D
Sbjct: 240 DCYGD 244
>gi|66735446|gb|AAY53905.1| farnesyl pyrophosphate synthase [Panax notoginseng]
Length = 343
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 78/241 (32%), Gaps = 17/241 (7%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
S L+ + ++L +LL A + + Y + GGK R V + L
Sbjct: 2 SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
+ + +G IE + Y L+ DD+ MD+ + RRG+P A+
Sbjct: 62 KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGMIAV 119
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L + I+ Q + + + G + + + E
Sbjct: 120 NDGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYS 179
Query: 178 FMIQK-----MKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCE 231
I + +M+ + ++ +G FQ+ DD LDC
Sbjct: 180 LPIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHLLDVKDILIEMGTYFQVQDDYLDCF 239
Query: 232 E 232
Sbjct: 240 G 240
>gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Scheffersomyces stipitis CBS 6054]
gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
[Pichia stipitis CBS 6054]
Length = 465
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM + + A+++ A + E FG NLG+ FQ+ DD+LD
Sbjct: 306 FEYYLHKTYLKTASLMSKSSRAAAVLSGAHDDIIENCYEFGRNLGLCFQIVDDMLDYTA 364
>gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 300
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ M KT +LM +C + A++A S E +G N+G+ FQL DD+LD
Sbjct: 141 FSHYLMKTYKKTASLMAHSCRAVAMLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVS 199
>gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
Length = 347
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 23/252 (9%)
Query: 8 KLQENSKRIDTIL---------DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFL 57
L+ K I+ I D L+ ++ + D + + AI GGK+IR +
Sbjct: 6 FLKNIEKNINKIFSTTNFLNLFKDNDLKFTFKIKKETLDYIKAPAIEIVNRGGKRIRPMI 65
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTA 116
+ A + + + + +++ RRG +H+ Y +
Sbjct: 66 MILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAIHLIYGIDNS 125
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I AGN + ++I + + T + G + +
Sbjct: 126 INAGNLIYFLPAKLIEKSNLKENQKLLIYENFFTTLSNLHLGQGIDIKFHNESYIPSIKE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC------ 230
+ ++KT +L A AI+ + K+ F LG+ FQ+ DD+ +
Sbjct: 186 YISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVYFQIIDDIKNIKNKING 244
Query: 231 --EED---LPKK 237
D KK
Sbjct: 245 KEFGDDLLEGKK 256
>gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase;
geranyltranstransferase [Schistosoma mansoni]
gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni]
Length = 401
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 69/279 (24%), Gaps = 45/279 (16%)
Query: 2 NGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
+ K +E + + + +LL + Y L GK+IR LV
Sbjct: 3 TSDIHIKYREVKENFENYFNTFVNLLRHVHPKSLELAEQHFQNVTSYNLSSGKRIRGVLV 62
Query: 59 TECASLFN-------VNHLTALRVGAAIECIHCYSLIHDDLPS------MDNGYIRRGKP 105
+F+ N +G +E +H L+ DD+ +
Sbjct: 63 VLSYMVFSNKNENSRKNLSCVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHCTQID 122
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ + + + ++ + L + +
Sbjct: 123 SNRGLIGVNDGLHLILSSKYLIHSLFAENQSDVDSYSWKDKNNVYLKLCKLFDEISYKTC 182
Query: 166 DIQD----------------------------EFIDETQVFMIQKMKTGALMCFACESGA 197
Q + + + G
Sbjct: 183 SGQCLDVLSSNPNNQCILDRKQNNLEFDSFTRNYSPDVFEAITHWKTGFYTFYLPVACGM 242
Query: 198 IMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+A ++ + ++ LG FQ DD LDC D
Sbjct: 243 ILAEVDTDDIFKSVQHILLKLGNYFQAQDDYLDCFGDSE 281
>gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
Length = 307
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 25/234 (10%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+L+ +I + + ++ + ++ K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESSFIDELFSKIGPS------------KMLRSKLMLALLNEK 50
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
L + +D +RR P+++ + A++ G+ +
Sbjct: 51 TDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYS 110
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +S + L + + ++ + + I + KT
Sbjct: 111 KAFFELSKMG-------ELIAKALSNAVLRLSRGEIEDVFVGECFNSNKQKYWRILEDKT 163
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +S AI+ FG N G+ FQ+ DDLLD +D L K
Sbjct: 164 AHFIEASLKSMAILLDKDAKIYA---DFGLNFGMAFQIVDDLLDIIQDAKTLGK 214
>gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 189
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ D E + KT L A + AI+A AS + + +G LG FQL
Sbjct: 17 MNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVETAFQDYGRYLGTAFQLI 76
Query: 225 DDLLDCEEDLPKK 237
DD+LD D K+
Sbjct: 77 DDVLDYVAD-GKE 88
>gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
Length = 325
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 83/226 (36%), Gaps = 8/226 (3%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E+ I L + S +Q + D + Y GK +R+ L A L +
Sbjct: 7 ESLPYIQEELVAVKALMKSELQLKIPDVREKILAYMDAPGKYLRAGLCLAMAQLT-PEGI 65
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
T + A + +D RRG +HIQ AI AG+ L+TYA +
Sbjct: 66 TQSKRYIAAAIEVLHLATLIHDDVIDEADTRRGIEALHIQKSNRLAIYAGDYLMTYAARL 125
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I Q + L G+ Q+ + + + + KT L
Sbjct: 126 I-----QKSQQEFDRNPLDAWVMEGILIGELNQLANQYRQGMTMYDYLRQIRGKTALLFA 180
Query: 191 FACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A G ++ ++ ++ G+ +G+ FQL DDL+D + D
Sbjct: 181 AATFFGYYSLSQSALQNRQAFY-LGQAIGMAFQLRDDLIDYQVDAK 225
>gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 338
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 13/216 (6%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----NHLTALR 74
L + T D +A+ + GGK++R + A +R
Sbjct: 15 YLQAVEEGLRRAATTTDPDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVR 74
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A+E +H SL HDD+ + A + +++
Sbjct: 75 GAVAVELVHLASLYHDDVMDEASE---------RRGVSSANARFGNLIAVVTGDFLLARA 125
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ ++ D + KT +LM A
Sbjct: 126 AGIAARLGEEVAAALADTLAAMCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAAR 185
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
AI+ Q + L G LG++FQL DD+LD
Sbjct: 186 IPAIVLGRDQAMLDALSAAGTALGMLFQLRDDVLDL 221
>gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium dentium ATCC 27679]
gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium dentium ATCC 27679]
Length = 391
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 24/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
M+ + L++ RI ++ D + A + A+ + GGK++R+
Sbjct: 33 MSSS--TDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRAL 90
Query: 57 LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L + F + A+E +L+HDD+ + R +
Sbjct: 91 LTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDIIDDSDLRRGRPSAHRALA 150
Query: 111 YDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ I + + + + + + + + GQ+LD+
Sbjct: 151 SGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDL 210
Query: 168 QDEFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLR-CFGENLG 218
E + + + G + A + L G LG
Sbjct: 211 AVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLG 270
Query: 219 IIFQLADDLLDCEE 232
+ FQLADDLLD
Sbjct: 271 LAFQLADDLLDVIG 284
>gi|296206412|ref|XP_002750194.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
jacchus]
Length = 395
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 66/257 (25%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T +L + Y +GGK R
Sbjct: 43 MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDALAQLKEVLEYNAIGGKYHR 102
Query: 55 SFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
V + + + +
Sbjct: 103 GLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTHRGQICWYQ 162
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQ 163
+ A N + + K ++ ++ L Q + Q
Sbjct: 163 KPGVGLDAINDAVLLEACVYRPLKLYCREQPYYLNLIELFLQNSYQTEIGQTLDLITAPQ 222
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
D F ++ +++ + MA + E + +G FQ
Sbjct: 223 DNVDPDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 282
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 283 IQDDYLDLFGDPSVTGK 299
>gi|297591959|ref|NP_001172060.1| farnesyl pyrophosphate synthase [Sus scrofa]
gi|262072800|dbj|BAI47708.1| farnesyl diphosphate synthase [Sus scrofa]
Length = 421
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 64/257 (24%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q+ + I+ L + H + RL + Y ++GGK R
Sbjct: 69 MNGDQKLDAYARERQDFIQHFSQIVKVLTEEDIGHPEIGDAVARLKEVLEYNVVGGKYNR 128
Query: 55 SFLVTECASLFNVNHLTAL----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
V ++ + +D G +
Sbjct: 129 GITVLVVFRELVEPRKQDADSLQRALTVGWCIELLQAFFLVADDIEDSSLTRRGQTCWYR 188
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
A + + L T ++ G
Sbjct: 189 KPGIGLDAINDAFLLEACIYRLLKFYCREQPYYLNLIELFLQTSYNTEIGQTLDLIAGPQ 248
Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
++ E + I K KT + MA + E + +G FQ
Sbjct: 249 GNVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILMEMGEFFQ 308
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 309 IQDDYLDLFGDPSVTGK 325
>gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 332
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 37 DRLLSAIRYAL-LG--GKKIRS-FLVTECASLFNVNH-------LTALRVGAAIECIHCY 85
L +A Y LG GK++R L+ +++ N A +
Sbjct: 10 PALSTASEYFFKLGAEGKRVRPTVLMLMASAMTNGVMTSAAQGGWRETDHAPAHQAPADV 69
Query: 86 SLIHD---------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+DN RRG ++++ AI+AG+ LL A
Sbjct: 70 RRRQQRLAEIAEMIHVASLLHDDVLDNAATRRGLRALNLEVGNKLAILAGDFLLARASVT 129
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++S + + S+++ L +Q + L D ++ +T KT +L+
Sbjct: 130 LASLRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMDHYVKKT------YYKTASLIA 183
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ ++ A++ + + +G+NLG+ FQ DD+LD L K
Sbjct: 184 NSSKAIALLGGHGEESAQLAYDYGKNLGLAFQFQDDVLDFIGSESLLGK 232
>gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
SS14]
gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum]
gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
SS14]
Length = 364
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 79/254 (31%), Gaps = 26/254 (10%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASH---------MQTQHNDRLLSAIRYALL-GGKKIR 54
+ L + + I+ L D L + + ++ L + + GGK+ R
Sbjct: 1 MKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGKRWR 60
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHC---------------YSLIHDDLPSMDNGY 99
L+ A L + R + ++ D+
Sbjct: 61 PLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIEDHSS 120
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
RRGKP +++Y + A + L +A +I + + G
Sbjct: 121 TRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSATISATRALHMGQ 180
Query: 160 LGGQ-MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ Q + +KTGAL+ + E G + A S E +G
Sbjct: 181 ALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREARSFGAQVMPIG 240
Query: 219 IIFQLADDLLDCEE 232
I FQ+ DD+ +
Sbjct: 241 IGFQILDDVQGIDG 254
>gi|254586445|ref|XP_002498790.1| ZYRO0G18634p [Zygosaccharomyces rouxii]
gi|238941684|emb|CAR29857.1| ZYRO0G18634p [Zygosaccharomyces rouxii]
Length = 348
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 74/247 (29%), Gaps = 19/247 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L E K +D L L Q M + + ++ Y GGK R V +
Sbjct: 1 MSDNKSKFLAEFPKIVDE-LKQDLAQYG--MPSDAVEWYERSLNYNTPGGKLNRGLSVVD 57
Query: 61 CASLFNVNHLTALRV---------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
++ T L G IE + Y L+ DD+ + I+
Sbjct: 58 TFAILKGTTATQLPSEQYSKLALLGWCIELLQAYFLVADDMMDRSITRRGQPCW-YKIEE 116
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLGGQMLD 166
AI L ++++ S I + L + +
Sbjct: 117 VNEIAINDAFMLEAAIYKLLKSHFRSEPYYIDLVELFHEVTFQTELGQLLDLITAPEDKI 176
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLAD 225
+F F++ +A + + ++ + LG FQ+ D
Sbjct: 177 DLSKFSPAKHSFIVIFKTAYYSFYLPVALAMYVAGISDPKDLKQAQDVLIPLGEYFQIQD 236
Query: 226 DLLDCEE 232
D LDC
Sbjct: 237 DYLDCYG 243
>gi|111305075|gb|AAI20219.1| FDPS protein [Bos taurus]
Length = 376
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 68/243 (27%), Gaps = 16/243 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASL---F 65
Q+ + I+ L + H + RL + Y +GGK R V
Sbjct: 38 QDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNRGLTVVITFRELVEP 97
Query: 66 NVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNG 122
+L+ + MD+ RRG+ + + AI
Sbjct: 98 GKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFL 157
Query: 123 LLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L + + ++ + + Q L + Q F ++
Sbjct: 158 LESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEKRYK 217
Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+++ + MA + E + +G FQ+ DD LD D
Sbjct: 218 SIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDDYLDLFGDPSM 277
Query: 234 LPK 236
K
Sbjct: 278 TGK 280
>gi|222629694|gb|EEE61826.1| hypothetical protein OsJ_16466 [Oryza sativa Japonica Group]
Length = 403
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 63/206 (30%), Gaps = 11/206 (5%)
Query: 41 SAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ + Y + GGK R V + L + + + +
Sbjct: 98 AMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDIT 157
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+ + + A N + + + K K+ ++ L + IGLQ
Sbjct: 158 DNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQ 217
Query: 158 GMLGGQMLDIQDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+G + I + + +++ + ++ A ++
Sbjct: 218 TAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVE 277
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
L+ +G+ FQ+ DD LDC D
Sbjct: 278 LKNVLIEMGVYFQIQDDYLDCFGDPE 303
>gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 357
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 67/238 (28%), Gaps = 18/238 (7%)
Query: 15 RIDTILDDLLLQTASHMQTQH-----NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
R + + + + D + +L GGK++R L+ E A L
Sbjct: 15 RFNARFAEYFDTLGTALDAPAFSRFTPDCVGLLRDLSLRGGKRMRVVLLHEAARLVTAEP 74
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-- 127
+ L A + +D+ RRG PT + Y E L
Sbjct: 75 VDGLDAAALSIELLQTH-GLVHDDLIDDSATRRGGPTTYYAYRERFPGRPRAALGLTVLA 133
Query: 128 ---------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
++ + ++ + + + + E
Sbjct: 134 GDLALALSLRVLLDAELPVAVRQAMVEVQTRAATDTFVGQIADLERDFTAAVPDAEMLHD 193
Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + G + A A ++ LR + +GI Q+ DD LD D
Sbjct: 194 VADHKTARYSVLAPMRLGLLAAGAEPGAHEDELRRYARLVGICGQMRDDWLDLFGDEG 251
>gi|61744001|gb|AAX55631.1| farnesyl diphosphate synthase [Ips pini]
Length = 433
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 67/236 (28%), Gaps = 12/236 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ + I+ +L + + R ++Y GKK R + +
Sbjct: 97 RDFMAQFPDIIRELTEVGRNQELPEVMKRYARVLQYNTPNGKKTRGLITISTYKMLEDPA 156
Query: 70 LTAL---RVGAAIECI--HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + ++ +D+ RRG + Q + ++
Sbjct: 157 KITTENLKKAGILGWCIEMLHTYFLIIDDIIDHSDTRRGAICWYRQPGIGLTAVYDAVMM 216
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHN------IGLQGMLGGQMLDIQDEFIDETQVF 178
++ + + + L L M + + +E
Sbjct: 217 ENGVYLLLKRHFKDHPMYTNIIELFHDMALKTSLGQSLDTMCLNDDGKPKLDIHNEQDTS 276
Query: 179 MIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + + ++ + + R ++G FQ+ DD LDC D
Sbjct: 277 IVNYKTSYYSFYLPVAAAMYLLGMDDPEQHRQARTILLDMGQFFQIQDDFLDCFGD 332
>gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83]
Length = 307
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS--------KMLRSKLMLALLNEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKVLNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------ELIAKALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|62959225|gb|AAY23720.1| farnesyl diphosphate synthase [Prochlorococcus marinus str.
CCMP1377]
Length = 145
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTHNIGLQG 158
RRGKPT HI + E TA++AG+ L AF +++ +T +R+++ L+
Sbjct: 13 RRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMA 72
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
L + + V +Q++KTGAL+ E GAI+ ++ + LR + +LG
Sbjct: 73 GGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDLG 132
Query: 219 IIFQLADDLLDCE 231
+ FQ+ADD+LD E
Sbjct: 133 LAFQIADDILDVE 145
>gi|62959223|gb|AAY23719.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. SS2]
Length = 145
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTHNIGLQ 157
+RRGKPT HI + E TA++AG+ L AF +++ +T +R+++ L+
Sbjct: 12 MRRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGM 71
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
L + + V +Q++KTGAL+ E GAI+ ++ + LR + +L
Sbjct: 72 AGGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDL 131
Query: 218 GIIFQLADDLLDCE 231
G+ FQ+ADD+LD E
Sbjct: 132 GLAFQIADDILDVE 145
>gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
Length = 338
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GGK +R L A L A+E +H +SL+HDDL MD RR +PT
Sbjct: 53 GGKLVRPALALLSAEAAGAAVEVGLPGAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ AI+AG+ LL A +++ + + L G+Q ++ GQ D+
Sbjct: 111 TVFGADGAILAGDALLGLATQVLLEVEGEPGRRAAIMLGA------GVQDLVRGQAEDLY 164
Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
E ++ ++ KTGAL+ + GA++A + L FG LG FQL D
Sbjct: 165 FETRNDVTVADTLTMEDGKTGALLSCSAAIGAVLAGGRTELVDGLAEFGSRLGTAFQLVD 224
Query: 226 DLLDCEEDLP 235
DLL D
Sbjct: 225 DLLGIWGDPA 234
>gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
Length = 347
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 23/252 (9%)
Query: 8 KLQENSKRIDT------ILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFL 57
L+ K I+ L+ + + L AI GGK+IR +
Sbjct: 6 FLKNIEKNINNVFSTTNFLNLFKDKDLKFTLKIKKETLDYIKAPAIEIINRGGKRIRPMI 65
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTA 116
+ A + + + + +++ RRG +H+ Y +
Sbjct: 66 MILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGTSAIHLIYGIDNS 125
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I AGN + ++I + + T + G + +
Sbjct: 126 INAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDIKFHNESYIPSIKE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC------ 230
+ ++KT +L A AI+ + K+ F LG+ FQ+ DD+ +
Sbjct: 186 YISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVYFQIIDDIKNIKNKING 244
Query: 231 --EED---LPKK 237
D KK
Sbjct: 245 KEFGDDLFEGKK 256
>gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
Length = 220
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + +K+ +L+ +C + A++ + + +G+NLG+ FQL D
Sbjct: 53 NPVWTEETISYYLQKTYLKSASLISKSCRAAALLGGSDGVTVDAAYDYGKNLGLAFQLVD 112
Query: 226 DLLDCE 231
D+LD
Sbjct: 113 DMLDYT 118
>gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 363
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 71/239 (29%), Gaps = 18/239 (7%)
Query: 14 KRIDTILDDLLLQTASHMQTQH-----NDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+R + + ++ + + + ++ GGK++R L+ E A L +
Sbjct: 20 RRFNALFEEYFDTLDRTLDAPSFSRYAPECVQLLRELSMRGGKRMRVVLLHEAAGLVSAE 79
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA-----------I 117
L A + +D+ RRG P+ + Y E +
Sbjct: 80 PAEGLDAAALSIELLHTH-GLVHDDLIDDSPTRRGGPSTYYAYRERFPRLPQAALGLTVL 138
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L ++ + ++ + + ++ + ++
Sbjct: 139 AGDLALGLSLRVLLEARLPVALRQAMAEAQTRAAADTFVGQIVDLERDFTGAVPGEDVLH 198
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
+ + G + A ++ LR + +GI Q+ DD LD D
Sbjct: 199 SVADFKSARYSVLAPMRLGLLAAGGQPEAFDQELRRYARLVGICGQMRDDYLDLYGDAE 257
>gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori
Lithuania75]
Length = 307
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKQLKAIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +D +RR P+++ + A++ G+ + AF
Sbjct: 55 SLDKVFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------EAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
Length = 368
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
+ + ++KTGAL+ + GA+ + + LR FGE+LG+ +Q DDLL D
Sbjct: 205 ECLRMAQLKTGALLGCSTALGAMFGGGRSEQVDHLRLFGEDLGLAYQYVDDLLGIWGDPR 264
Query: 234 -LPK 236
K
Sbjct: 265 VTGK 268
>gi|332671664|ref|YP_004454672.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
gi|332340702|gb|AEE47285.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
Length = 367
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 83/251 (33%), Gaps = 18/251 (7%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVT 59
L +++ ++ + L DLL++ A L + + LGGK +R L
Sbjct: 16 TAALAHAVEDATRLATSTLQDLLVERAVRAGRHADAARVLWEDLA-STLGGKLMRPRLTA 74
Query: 60 ECA-SLFNVNHLTALRVGAAIECIHCYSLIH-----------DDLPSMDNGYIRRGKPTV 107
L + V AA E +H L+H L R +
Sbjct: 75 AAYLGLGGTDLGAVAPVAAAQEVLHVAMLVHDDVLDHDDVRRGRLNVSGAARRRGLTRGL 134
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ A+ AG A + + L+ G++ + G++LD+
Sbjct: 135 PAVDADAQALAAGILAGDLALASAFRLVARTPVPGDVRERLTDLLADGVETAVAGELLDV 194
Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E + V + SGA++A A ++ RL LG+ FQL
Sbjct: 195 ASETLAPADVDALLVAALKTAEYSCRVPLASGAVLAGADEDVLRRLDDVAAALGLAFQLT 254
Query: 225 DDLLDCEEDLP 235
DD L D
Sbjct: 255 DDDLGVFGDPA 265
>gi|328870615|gb|EGG18988.1| putative protein serine/threonine kinase [Dictyostelium
fasciculatum]
Length = 1550
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 78/250 (31%), Gaps = 23/250 (9%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSF------- 56
++Q+ + I IL + +L+ M R ++ + GGK R
Sbjct: 36 KEEVQDFVE-IFPILKNEILKDLPSMDIPEPARHWISMNIEKNVAGGKMNRGLTVIHSLQ 94
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD------NGYIRRGKPTVHIQ 110
L+ E L A +G IE + + L+ DD+ + R P Q
Sbjct: 95 LLVEGRQLTRSEVFKANVLGWCIEWLQAFFLVSDDIMDQSITRRGAPCWYRTNNPISKDQ 154
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ------GMLGGQM 164
V I + + + I K + + +M +
Sbjct: 155 NALVGNIAINDSFILESCIYILIKKYFRNEAYYADVMDLFHEVTYQTELGQLLDLTTQPN 214
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQL 223
F +T +++ + +MA S+ + + +G FQ+
Sbjct: 215 RGDFSLFQLDTYNRIVKYKTSYYSFYLPVALAMLMAGITSKPAFDTAQDILLPMGEYFQI 274
Query: 224 ADDLLDCEED 233
DD LDC D
Sbjct: 275 QDDYLDCYGD 284
>gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
Length = 902
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 28/247 (11%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL--LGGKKIRSFLVTECAS-L 64
++ + I+ L L + + Q ND LL+ I L L GKK R ++ + L
Sbjct: 32 IENVYQFIEKDLLLLTNSILNELSKNQENDSLLNKISCLLFNLKGKKTRPTVIFLLSKIL 91
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N + + A+ ++ +D RR + TV+ Y AI G+ +L
Sbjct: 92 ENEKTKSNSFLKLAMVAEMFHTASLIHDDVIDGSDTRRDEKTVNTLYSNRMAITGGDFIL 151
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ + I+ S + S L ++ G++L +Q + + +K
Sbjct: 152 SKSMVILGSIRNVRVAKSMS---------NVLGDLVDGELLQLQGNGLSFEKYLQKSYLK 202
Query: 185 TGALMCFACESGAIMA------------HASQNEKERLRCFGENLGIIFQLADDLLDCE- 231
T ++ C+S A++ + E FG +GI FQ+ DDLLD
Sbjct: 203 TSSMFSNCCKSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQIIDDLLDFTI 262
Query: 232 --EDLPK 236
L K
Sbjct: 263 SSSSLGK 269
>gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain
Ankara]
gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata]
Length = 384
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 75/244 (30%), Gaps = 28/244 (11%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVT----------------- 59
L+ + + ++ +Q+ S A++Y L GGK +R +V
Sbjct: 25 KFLELAINELKTYGLSQNVLLYYSYAVQYNLQGGKMLRGTMVLSTVKSLCGTNIPENLMT 84
Query: 60 --ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
++N NHL V +E + L+ DD+ + AI
Sbjct: 85 QTLIVGMYNSNHLKQFIVAWCVELLQTSFLVADDIIDKSTKRRSNTCWYLVPTIGVSNAI 144
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L T + I+ + K + + + G D +++
Sbjct: 145 NDVMFLYTLIYRILFNTMKDSKKFLEIIETFNRVSMTTILGQHLDIYESNSDVLFHDSKE 204
Query: 178 FMIQK------MKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLD 229
+ + G +++ + ++ +G +FQ DD LD
Sbjct: 205 ATKLFAEICKNKTSYYSFFLPLKLGMMLSGVELSNLFYSKVESISILIGTLFQAQDDYLD 264
Query: 230 CEED 233
C D
Sbjct: 265 CYGD 268
>gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
PeCan4]
gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
PeCan4]
Length = 307
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 34/237 (14%)
Query: 4 GLPSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +K+ K I+ +D+L + K +RS L+
Sbjct: 8 TIQNKIASWIKGIESAFIDELFSKIGPS--------------------KMLRSKLMLALL 47
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L + +D +RR P+++ + A++ G+
Sbjct: 48 NEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDV 107
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ AF +S + + + ++ I + + D+ + + I +
Sbjct: 108 FYSKAFFELSKMGESIAQTLSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILE 160
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT + + +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 161 DKTAHFIEASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo]
gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis]
Length = 457
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 81/244 (33%), Gaps = 27/244 (11%)
Query: 20 LDDLLLQTASHMQTQ---HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75
L+ L+ + +Q+Q N + ++Y L G K R L A L ++ +
Sbjct: 110 LERLVNKFQERIQSQVLTDNTEINDVVKYVLTGQSKLFRPKLGLMVARLLSMRNTHGENT 169
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI----- 130
+A E + + +L + + R + I + +
Sbjct: 170 TSADEGSTLGYMNYGNLSTELMDKVLRLLQSYEIVHIGSLMHDDVLDSANLRRRMPAVHV 229
Query: 131 ------------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ + +L++ + L+ ++ G++ ++ E+ +
Sbjct: 230 KAGVKIAVLVGDLMLTRACSTVANLGSQVLTVRMSKALENLIKGEITTVEGTDNVESMMC 289
Query: 179 MIQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
K C S A + + + G ++G+ FQ+ DDLLD E
Sbjct: 290 NYLKKTFLKTASLIAECCASIASLLRQDEITCHKCYLLGLHVGMAFQIYDDLLDYECGSS 349
Query: 233 DLPK 236
DL K
Sbjct: 350 DLGK 353
>gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona
intestinalis]
Length = 348
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 17/243 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKKIRSFLVTECAS 63
E D +++ + + N+ R+ + Y GK+ R V
Sbjct: 5 SELWDLFDKHFQEIVRELSISPVNGGNEICWSFERIKDLLEYNAPHGKRTRGLTVVAAFK 64
Query: 64 LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+ + +++ + + + + + A N
Sbjct: 65 TIAGDGISEDEMKLALTMGWAVEILQASFLVADDLMDQSKTRRGQACWYLNPNVGYQAVN 124
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
+ + + + K + L H + L ++G + E
Sbjct: 125 DGMILETCVFTLIRQHCKGKAFYADIFDLFHKVILNTLMGQSLDMEASEQPTVDFTLFTE 184
Query: 180 ------IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232
I+ MA + + +G +FQ+ DD LDC
Sbjct: 185 TKHAAIIKYKTAFYSFYLPVAIAFYMAGINDEQCHTAACDILTKIGCLFQIQDDYLDCYG 244
Query: 233 DLP 235
D
Sbjct: 245 DPE 247
>gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5]
Length = 742
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 7/223 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ +L + + GGK RS ++ C + + + R
Sbjct: 414 ENVLGRYAMNRGAPADKICETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYI 473
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A E +H SLI DD+ V + + I
Sbjct: 474 AVAELLHVGSLIIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPP 533
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGALM 189
+ I L QG+ ++ + + ++ I KTG +
Sbjct: 534 EKASRIYQLYFDVLLAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAV 593
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C ++ A E + FG LG+ FQ+ DD L+
Sbjct: 594 GALCSMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG 636
>gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
Length = 307
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 84/237 (35%), Gaps = 34/237 (14%)
Query: 4 GLPSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +K+ K I+ +D+L + K +RS L+
Sbjct: 8 TIQNKIASWIKEIESAFIDELFSKIGPS--------------------KMLRSKLMLALL 47
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ L + +D +RR P+++ + A++ G+
Sbjct: 48 NEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKAAMRRKLPSINALFGNFNAVMLGDV 107
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ AF +S + ++ + ++ I + D+ + + I +
Sbjct: 108 FYSKAFFELSKMGESIAKSLSNAVLRLSRGEI-------EDVFVGGSFNSDKQKYWRILE 160
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT + + +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 161 DKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 350
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 17/241 (7%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIRSFLV 58
++ R+ L+ S + + + Y+ GGK +R L
Sbjct: 19 ADAHRVLDRCRALVRPALSEAVGRLHPWIGEMAAYSFGWCEVGGAPVAAPGGKGVRQALA 78
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A + + A+E +H +SL+HDD+ MD RR +P V Y A++
Sbjct: 79 VLGAEVAGAPARAGVAAAVAVELVHTFSLLHDDI--MDGDADRRRRPAVWKAYGTGPAVL 136
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
AG+ L A E +++ + L +L + E + +
Sbjct: 137 AGDALFALAVETLAAQPGGAEAVRTLSAALGDLVRGQADDLLFTERPWTGPERVRPDEYR 196
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
+ + KTGAL+ A GA + A+ L G +LGI FQ+ DD+L D
Sbjct: 197 AVAEHKTGALLGCAAALGAALGGAAPETVAALDRVGRHLGIAFQIVDDVLGIWGDPRVTG 256
Query: 236 K 236
K
Sbjct: 257 K 257
>gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1]
Length = 316
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 7/212 (3%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+L+ + ++ L + Y GK +RS L+ + NV ++ A I+
Sbjct: 2 VLVPLSPSWNKENEKTLTTPYHYLADQTQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVID 61
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SL+ DD+ DN +RR +P H+ + I N + A +++
Sbjct: 62 TLHLSSLLIDDIE--DNSKLRRSRPCSHMIFGVPQTINCANYMYFVAMRLLTDAIENEDK 119
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ +Q + +G +E E + + KTG L + + ++A
Sbjct: 120 RLVAQNVFLDEMVNLHRGQGLDLHWRENNECPSEQEYVNMVMNKTGGLFRLSAKLMNLLA 179
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++L LG+I+Q+ DD L+
Sbjct: 180 DQP---CDKLITLSNMLGVIYQIKDDYLNLIS 208
>gi|90078142|dbj|BAE88751.1| unnamed protein product [Macaca fascicularis]
Length = 353
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL + Y +GGK R
Sbjct: 1 MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVTDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 121 KPGVGLDAINDAILLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 181 GNVDLGRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51]
Length = 307
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESGFIDELFSKIGPS--------KMLRSKLMLALLNEKIDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------ELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
Length = 535
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ+ + +KT +LM + S A+++ A N + FG NLG+
Sbjct: 363 NGQVSHDTNVDAAFEYYLHKTYLKTASLMSKSARSAAVLSGARDNVVDSCYDFGRNLGLC 422
Query: 221 FQLADDLLDCEE 232
FQ+ DD+LD
Sbjct: 423 FQIVDDMLDYTS 434
>gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 742
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 7/223 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ +L + + GGK RS ++ C + + + R
Sbjct: 414 ENVLGRYAMNRGAPADKICETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYI 473
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A E +H SLI DD+ V + + I
Sbjct: 474 AVAELLHVGSLIIDDIQDNSVVRRGGKCVHVEYGVPTAINAGSACYFMGPRAARIQDLPP 533
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGALM 189
+ I L QG+ ++ + + ++ I KTG +
Sbjct: 534 EKASRIYQLYFDVLLAGHAGQGLDIYRLDYLMPKVVESGDASTLFDALDAIHTYKTGGAV 593
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C ++ A E + FG LG+ FQ+ DD L+
Sbjct: 594 GALCSMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG 636
>gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267]
gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267]
Length = 297
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ KT L+ A GA++ E + +G+NLG+ FQ+ DD+LD +D
Sbjct: 144 YETMIYYKTAVLIEAAAAVGAMLVGL---ETRNFKIYGKNLGLAFQIIDDILDVTQDAAT 200
Query: 234 LPK 236
L K
Sbjct: 201 LGK 203
>gi|145294798|ref|YP_001137619.1| hypothetical protein cgR_0745 [Corynebacterium glutamicum R]
gi|14517651|gb|AAK64296.1|AF159510_1 GGPP synthase [Corynebacterium glutamicum]
gi|140844718|dbj|BAF53717.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 382
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 75/252 (29%), Gaps = 27/252 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + I L+ + + T + L A AL GGK IR ++ +
Sbjct: 28 DFNDEIYRELNRICASLSQQCSTYPPEFRTCLDAAFQALRGGKLIRPRMLLGLYDALVDD 87
Query: 69 H------------------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ G + + + + +
Sbjct: 88 DIEVKLNTVLQVAAALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILIHRTPESFAQTQR 147
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
H+ + + ++ GN L +I + +R +L+ T N + G
Sbjct: 148 DPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHPQRVRLLDLLNHTMNDTIVGEFLDVG 207
Query: 165 LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
L + + + + + AI+A Q + ++ G NLGI +QL
Sbjct: 208 LSSKAISPNMDIALEMSRLKTATYSFELPMRAAAILAELPQEIETQIGEIGTNLGIAYQL 267
Query: 224 ADDLLDCEEDLP 235
DD L D
Sbjct: 268 QDDYLSTFGDAA 279
>gi|168203179|gb|ACA21460.1| farnesyl diphosphate synthase 4 [Picea abies]
Length = 347
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 18/245 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ +K +E + +L A + + Y + GGK R V +
Sbjct: 8 DVKTKFEEIYLELKA---QILNDPAFDYTEDARQWVEKMLDYTVPGGKLNRGLSVIDSYR 64
Query: 64 L-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-T 115
L +G IE + Y LI DD+ MD+ + RRG+P
Sbjct: 65 LLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDSSHTRRGQPCWFRLPKVGLI 122
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DE 170
A+ G L + I+ + + + G L + + +
Sbjct: 123 AVNDGILLRNHICRILKKHFRTKPYYVDLLDLFNEVEFQTASGQLLDLITTHEGATDLSK 182
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ T V ++Q +MA + + ++ +G FQ+ DD LDC
Sbjct: 183 YKMPTYVRIVQYKTAYYSFYLPVACALVMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 242
Query: 231 EEDLP 235
D
Sbjct: 243 FGDPE 247
>gi|62288319|gb|AAX78435.1| farnesyl diphosphate synthase [Dendroctonus jeffreyi]
Length = 429
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 68/244 (27%), Gaps = 23/244 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-------YALLGGKKIRSFLVTECA 62
+E S+ + DL+ + ++Q L +R Y GKK R ++
Sbjct: 87 KEQSRDFMALFPDLVRELTEVGKSQ---ELHDVMRRFARVLQYNTPTGKKNRGLIILSTY 143
Query: 63 SLFNVNHLTAL----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ + D G + + +
Sbjct: 144 RMLEDPEKLTPENIRLASILGWCAEMVHAYVLILDDIMDGSETRRGALCWFRQSGIGLTA 203
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
A++ N + + + + + L T L M + +
Sbjct: 204 VNDAVMIENAVYLLIKRHLKDHPMYVPLMELFHEGNLKTTLGQSLDAMCLDTNGKPKLDM 263
Query: 172 IDETQVFMIQKMKT-GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLD 229
++ I K KT +A + + + + + +G FQ+ DD LD
Sbjct: 264 FTMSRYTSIVKYKTAFYSFQMPVAIAMYLAGMSDEEQHRQAKTILMEMGQFFQIQDDFLD 323
Query: 230 CEED 233
C D
Sbjct: 324 CFGD 327
>gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
YS-314]
Length = 374
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 38/272 (13%)
Query: 1 MNGGLP---SKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG 50
M+ G+ +L + ++ I L+ ++ + L +A + AL GG
Sbjct: 1 MDNGMTLTTEQLAPPGFDFNEEIYRELNRTFSSLSNRCSGYGPEFRACLDTAFQ-ALRGG 59
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHC-----YSLIHDDLPSMDNGYIRRGKP 105
K +R ++ + A I + +D RRGK
Sbjct: 60 KLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDVIDGDLYRRGKL 119
Query: 106 TV---------------------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
H+ + I+ GN L ++ + +R
Sbjct: 120 NFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFARVDLPHPTRLRL 179
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHAS 203
+L T N L G L + D + + + + AI+A S
Sbjct: 180 LDLLDHTMNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLRAAAILAGLS 239
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +++++ G +LG +QL DD L +
Sbjct: 240 EEDEQKVGVIGTHLGTAYQLQDDYLSTFGEAA 271
>gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica
HM-1:IMSS]
gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 314
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 70/203 (34%), Gaps = 16/203 (7%)
Query: 44 RYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
++ + GK++R + +R A+E +H +L HDD+ D
Sbjct: 3 KFVMGPGKRLRPLSLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDDIMDEDEMRR 62
Query: 101 R--------RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
K + D T T ++ + ++ +L L
Sbjct: 63 NAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGT 122
Query: 153 NIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
NI + +L+ + + MKT G +A S+++
Sbjct: 123 NIAEMVLELFSVLNYGQILDMSGLNTVEEYNLNIIMKTAIFFKTTASIGLTLAGRSEHDI 182
Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
E + +GE+ GI FQ+ DDLLD
Sbjct: 183 ELGKEWGEHFGIAFQMRDDLLDI 205
>gi|126434877|ref|YP_001070568.1| polyprenyl synthetase [Mycobacterium sp. JLS]
gi|126234677|gb|ABN98077.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
Length = 418
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 38/254 (14%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYA---------------LLGGKKIRSFLVTECASLF- 65
+ L H+ D + +R GGK++R +
Sbjct: 60 EFLSDLEEHLHAVVRDTVAEPLRSIDENLGTVAALCQSAVQSGGKRLRPRFAYWAWRVGA 119
Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ +R+ AA+E +H L+HDD+ + + G+
Sbjct: 120 PADAAPQPLIRLAAALELLHAAILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDAT 179
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--------------- 168
+ + G+ ++
Sbjct: 180 DFGDNMALLVGDLLWSAAHDTFDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQA 239
Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADD 226
++ +T +++ + + E G +A AS + LR + +G FQL DD
Sbjct: 240 GRDYHADTAEKILRYKTSAYTVERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDD 299
Query: 227 LLDCEE---DLPKK 237
L D K+
Sbjct: 300 LADLFGTTKTSGKR 313
>gi|108799219|ref|YP_639416.1| polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119868335|ref|YP_938287.1| polyprenyl synthetase [Mycobacterium sp. KMS]
gi|108769638|gb|ABG08360.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
gi|119694424|gb|ABL91497.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
Length = 418
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 38/254 (14%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYA---------------LLGGKKIRSFLVTECASLF- 65
+ L H+ D + +R GGK++R +
Sbjct: 60 EFLSDLEEHLHAVVRDTVAEPLRSIDENLGTVAALCQSAVQSGGKRLRPRFAYWAWRVGA 119
Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ +R+ AA+E +H L+HDD+ + + G+
Sbjct: 120 PADAAPQPLIRLAAALELLHAAILVHDDVIDASEVRRGQPSVRAALTAGHRRDAGWGDAT 179
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--------------- 168
+ + G+ ++
Sbjct: 180 DFGDNMALLVGDLLWSAAHDTFDDAVAGLPAGIAQRTSRAFRTMRVEVLAGQLLELRAQA 239
Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADD 226
++ +T +++ + + E G +A AS + LR + +G FQL DD
Sbjct: 240 GRDYHADTAEKILRYKTSAYTVERPVELGLELAGSASPATAQTLRDYAGAVGQAFQLRDD 299
Query: 227 LLDCEE---DLPKK 237
L D K+
Sbjct: 300 LADLFGTTKTSGKR 313
>gi|1922251|emb|CAA72793.1| farnesyl pyrophosphate synthase [Gossypium arboreum]
Length = 342
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 15/227 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALR 74
+LL + + + + + Y + GGK R V + L
Sbjct: 18 ELLQDPSFELTDESRQWVERMLDYNVPGGKLNRGLSVIDSYRLLKDGKELTQDEIFLTSA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MD+ + RRG+P A+ G L + I+ +
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGMIAVNDGVILRNHITRILKN 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188
+ + + G + + ++ ++ + ++Q
Sbjct: 136 HFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSLQQHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+M + + ++ ++GI FQ+ DD LDC +
Sbjct: 196 FYLPVACALVMCGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGNPE 242
>gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin]
gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin]
Length = 742
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 7/223 (3%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ +L + + GGK RS ++ C + + + R
Sbjct: 414 ENVLGRYAMDRGAPADKICETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYI 473
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A E +H SLI DD+ V + + I
Sbjct: 474 AVAELLHVGSLIIDDIQDNSVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPP 533
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGALM 189
+ I L QG+ ++ + + ++ I KTG +
Sbjct: 534 EKASRIYQLYFDVLLAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAV 593
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
C ++ A E + FG LG+ FQ+ DD L+
Sbjct: 594 GALCSMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG 636
>gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429]
gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429]
Length = 332
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 13/234 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
++ K+ID + ++ + + + + + + ++ L GK+IR L
Sbjct: 3 FEEFRIKHVKKIDEAIGKVIDE--NSLNSPVGNLVEELKKFCLRPGKRIRPLLFILGVEG 60
Query: 65 FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
F T ++ A IE +H + LIHDD+ + +
Sbjct: 61 FGGKVDETVYKIAATIEIMHSFLLIHDDIMDQSELRRGQPSMHNLLANKFKDRSFNPKIG 120
Query: 124 LTYAFEI--------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A + + + N G +L ++ E
Sbjct: 121 EDLALVLGDILFFIGLRVLSRLNIPYFFLEKFSECYINTGYGQILDVIYSMNRNYVRSEK 180
Query: 176 QVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
I K + G + + ++ + GI FQ+ DD++
Sbjct: 181 ISLEISKLKTAYYTFFYPFYLGTVFTGGNVG-RKLIEDIMIPAGIAFQIRDDII 233
>gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
Gambia94/24]
Length = 307
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 83/237 (35%), Gaps = 34/237 (14%)
Query: 4 GLPSKLQENSKRIDT-ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +K+ K I++ +D+L + K +RS L+
Sbjct: 8 AIQNKIASWIKEIESGFIDELFSKIGPS--------------------KMLRSKLMLALL 47
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +D +RR P+++ + A++ G+
Sbjct: 48 DEKTDAILLDKAFNLCTIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDV 107
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ AF +S + + + ++ I + + D+ + + I +
Sbjct: 108 FYSKAFFELSKMGESIAQALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILE 160
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT + + +S AI+ + + FG + G+ FQ+ DDLLD +D L K
Sbjct: 161 DKTAHFIEASLKSMAILL---DKDAKMYADFGLHFGMAFQIIDDLLDITQDAKTLGK 214
>gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi]
gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi]
Length = 334
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 64/224 (28%), Gaps = 5/224 (2%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NH 69
E KRI + + DR+ +++ GGK RS L+ E
Sbjct: 11 EGIKRI--AMQKFVTSLQERETKCIRDRIDKLFDHSVCGGKYKRSILLVEAYKALGGRQD 68
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+++ I + + E I N
Sbjct: 69 EERMKMVTNIAACLELLQSFFLIEDDVMDEGVNRRGKPCWHRLEGIGINGINDG-LLLDC 127
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
++S + + + + + G + ++ + + Q +
Sbjct: 128 MVSYILRSNRVSADVRDAFDEARRVTILGQILDGDTKSVEDCTWQRHQSITQHKTSHYTY 187
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ A++ A E ++ LG +FQ DD +DC D
Sbjct: 188 FTPLQIAALLT-AQPLIIEPVKRIAYLLGYLFQSKDDYMDCFGD 230
>gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a]
gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1]
gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40]
Length = 347
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 23/252 (9%)
Query: 8 KLQENSKRIDTIL----------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
L+ K I+ I D+ L T + + AI GGK+IR +
Sbjct: 6 FLKNIEKNINKIFSTTNFLNLFKDNDLKFTFKIKKKTLDYIKAPAIEIVNRGGKRIRPMI 65
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-IRRGKPTVHIQYDEVTA 116
+ A + + + + +++ RRG +H+ Y +
Sbjct: 66 MILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIEDNSLKRRGASAIHLIYGIDNS 125
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I AGN + ++I + + T + G + +
Sbjct: 126 INAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQGIDIKFHNESYIPSIKE 185
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC------ 230
+ ++KT +L A AI+ + K+ F LG+ FQ+ DD+ +
Sbjct: 186 YISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVYFQIIDDIKNIKNKING 244
Query: 231 --EED---LPKK 237
D KK
Sbjct: 245 KEFGDDLLEGKK 256
>gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
Length = 358
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 9/155 (5%)
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
++ +D RRG+ TVH ++D A++ G+ A +S +
Sbjct: 114 HAASLVHDDLVDQAARRRGRVTVHARWDNDVALMVGDYFFALASAEMSLSPDPRIITFYA 173
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
Q + + M+ + ++ +T L AC++G +
Sbjct: 174 QAVQVIVEGELSPVMVAEPAETARRQYFYKTGAKTAV------LFEAACKAGMAAGGGDE 227
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ L +G ++G+ FQ+ DD+LD + L K
Sbjct: 228 AQIAALAGYGFDVGVAFQIVDDVLDFIGNESTLGK 262
>gi|281211687|gb|EFA85849.1| hypothetical protein PPL_01081 [Polysphondylium pallidum PN500]
Length = 1488
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 72/251 (28%), Gaps = 23/251 (9%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF------ 56
+ L + + + L + Q + I ++ GGK R
Sbjct: 1140 EDFQNFL-DILPILTKEILKDLPSMD--IPAQQQQWISRLIDSSVAGGKMNRGLTVVHSL 1196
Query: 57 -LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM------DNGYIRRGKPTVHI 109
L+ E L A +G +E + + L+ DD+ + R
Sbjct: 1197 QLLVEGRQLTRSEVFQANVLGWCVEWLQAFFLVADDIMDQSITRRGQPCWYRTRNMLSSE 1256
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ------GMLGGQ 163
V +I + + + I K ++ + L+ +
Sbjct: 1257 PNATVGSIAINDAFILESCIYILVKKYFRNESYYADLLDLFHETSYQTELGQLLDLTTQP 1316
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222
+ +T +++ +MA S+ + + +G FQ
Sbjct: 1317 NRGDFSMYSLDTYRRIVKYKTAYYSFYLPVALAMLMAGITSKPAFDTAKDILLPMGEYFQ 1376
Query: 223 LADDLLDCEED 233
+ DD LDC D
Sbjct: 1377 VQDDYLDCYGD 1387
>gi|62389517|ref|YP_224919.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
ATCC 13032]
gi|41324851|emb|CAF19333.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
ATCC 13032]
Length = 372
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 76/252 (30%), Gaps = 27/252 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + I L+ + + T + L A AL GGK IR ++ + +
Sbjct: 18 DFNDEIYRELNRICASLSQQCSTYQPEFRTCLDAAFQALRGGKLIRPRMLLGLYNTLVDD 77
Query: 69 H------------------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ G + + + + +
Sbjct: 78 DIEVKLNTVLQVAVALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILMHRTPESFAQIQR 137
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
H+ + + ++ GN L +I + +R +L+ T N + G
Sbjct: 138 DPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHHQRVRLLDLLNHTINDTIVGEFLDVG 197
Query: 165 LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
L + + + + + AI+A Q + ++ G NLGI +QL
Sbjct: 198 LSSKAISPNMDIALEMSRLKTATYTFELPMRAAAILAELPQEIETKIGEIGTNLGIAYQL 257
Query: 224 ADDLLDCEEDLP 235
DD L D
Sbjct: 258 QDDYLSTFGDAA 269
>gi|125527405|gb|EAY75519.1| hypothetical protein OsI_03423 [Oryza sativa Indica Group]
Length = 392
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 11/206 (5%)
Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDL--PSM 95
+ Y +LGGK R V + + + + + + + M
Sbjct: 87 KMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIM 146
Query: 96 DNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
DN RRG+P A+ G L + I+ + + +
Sbjct: 147 DNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFK 206
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKER 209
G L + + E + + +++ + +
Sbjct: 207 TASGQLLDLITTHEGEKDLAKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENLDNFGD 266
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
++ +G FQ+ DD LDC D
Sbjct: 267 VKNILVEMGTYFQVQDDYLDCYGDPE 292
>gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16]
Length = 307
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+ +
Sbjct: 3 EKQLKAIQNKIASWIKEIESGFIDELFSKIGPS--------KMLRSKLMLALLNEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------ELIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLSKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii
ATCC 12478]
Length = 370
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 80/234 (34%), Gaps = 22/234 (9%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYA--------LLGGKKIRSFLVTECASLFNVNHLTA 72
+L + T+ +L A A + GK +RS + A
Sbjct: 30 RAVLATVGEFVVTRSASQLDEAASAAAGEILLTFVSRGKCLRSTFMYLGWLCGAAPSRAA 89
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH--------------IQYDEVTAII 118
L A++E +H ++L+ DD+ + V ++ E AI+
Sbjct: 90 LSAAASLELLHAFALLQDDVMDRSSQRRGSPAVHVQLAEWYRLRGLSGPAGRFGESAAIL 149
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G+ L +A +++ + + + G DI+D T +
Sbjct: 150 LGDVCLIWAEQMLRESGVEARRLQQLWPRYDAMRIELAVGQFADLANDIRDRPSLRTVLD 209
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + E GA MA +L +G ++G FQL DDLL
Sbjct: 210 IARRKSGNYTVRRPLEMGAAMADCDDRTLTQLGLYGADVGEAFQLRDDLLGVFG 263
>gi|212274364|ref|NP_001130900.1| hypothetical protein LOC100192004 [Zea mays]
gi|194690400|gb|ACF79284.1| unknown [Zea mays]
Length = 355
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 68/226 (30%), Gaps = 11/226 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGA 77
+++L A + + + Y +LGGK R V + + +
Sbjct: 30 EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSYRILKGVDVLSKEETFLAC 89
Query: 78 AIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP 134
+ + + + MDN RRG+P A+ G L + I+
Sbjct: 90 TLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRH 149
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGALM 189
+ + + G + + + ++ + ++Q
Sbjct: 150 FKGKPYYVDVIDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNLTVRRHIVQYKTAYYSF 209
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++A + + ++ +G Q+ DD LDC D
Sbjct: 210 YLPVACALLLAGENLDNFGDVKNILVEMGTYLQVQDDYLDCFGDPE 255
>gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99]
gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99]
Length = 307
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKRLKAIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG + G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGK 214
>gi|224089549|ref|XP_002308751.1| predicted protein [Populus trichocarpa]
gi|222854727|gb|EEE92274.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 15/225 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHLTAL 73
+LL A D + + Y + GGK R V + L
Sbjct: 17 KELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKYLKEGKELTEDEIFLTS 76
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
+G IE + Y L+ DD+ MD+ + RRG+P A G L + I+
Sbjct: 77 ALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGLIAANDGILLRNHIPRILK 134
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGA 187
+ + + + G + + ++ E + +
Sbjct: 135 NHFRDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYY 194
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA + + ++ +G FQ+ DD LDC
Sbjct: 195 SFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFG 239
>gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
Length = 347
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 13/208 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-I 100
AI GGK+IR ++ A + + + + +++
Sbjct: 50 AIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLK 109
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG +H+ Y +I AGN + ++I + + T + G
Sbjct: 110 RRGGSAIHLIYGTDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQG 169
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + ++KT +L A AI+ + K+ F LG+
Sbjct: 170 IDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF-LKLGVY 228
Query: 221 FQLADDLLDC--------EED---LPKK 237
FQ+ DD+ + D KK
Sbjct: 229 FQIIDDIKNIKNKINGKEFGDDLIEGKK 256
>gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
22.4-21]
Length = 144
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFG 214
+ L + + I +++ +I + KTGAL+ A + G I + + ++ L +
Sbjct: 1 MCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYA 60
Query: 215 ENLGIIFQLADDLLDCEEDLP 235
E +G+ FQ+ DD+LD E D
Sbjct: 61 EAIGLAFQVQDDILDIEGDSA 81
>gi|1346030|sp|P49350|FPPS_ARTAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1022770|gb|AAC49452.1| farnesyl diphosphate synthase [Artemisia annua]
Length = 343
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 66/241 (27%), Gaps = 13/241 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S + K DT+ +L+ A + + Y + GGK R V +
Sbjct: 3 STDLKS---KFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDS 59
Query: 62 ASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-A 116
L + L + MD + RRG+P A
Sbjct: 60 YQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIA 119
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
G L + I+ + + + G + + + E
Sbjct: 120 ANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKY 179
Query: 177 VFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I + +M ++ ++ +G FQ+ DD LDC
Sbjct: 180 SLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCF 239
Query: 232 E 232
Sbjct: 240 G 240
>gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
Length = 347
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 13/208 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-I 100
AI GGK+IR ++ A + + + + +++
Sbjct: 50 AIEIINRGGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDIEDNSLK 109
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG +H+ Y +I AGN + ++I + + T + G
Sbjct: 110 RRGASAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQG 169
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + ++KT +L A AI+ + K+ F LG+
Sbjct: 170 IDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LKLGVY 228
Query: 221 FQLADDLLDC--------EED---LPKK 237
FQ+ DD+ + D KK
Sbjct: 229 FQIIDDIKNIKNKINGKEFGDDLLEGKK 256
>gi|118486658|gb|ABK95166.1| unknown [Populus trichocarpa]
Length = 342
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 15/225 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHLTAL 73
+LL A D + + Y + GGK R V + L
Sbjct: 17 KELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKYLKEGKELTEDEIFLTS 76
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
+G IE + Y L+ DD+ MD+ + RRG+P A G L + I+
Sbjct: 77 ALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGLIAANDGILLRNHIPRILK 134
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGA 187
+ + + + G + + ++ E + +
Sbjct: 135 NHFRDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYY 194
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA + + ++ +G FQ+ DD LDC
Sbjct: 195 SFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFG 239
>gi|255075269|ref|XP_002501309.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
gi|226516573|gb|ACO62567.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
Length = 342
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 66/246 (26%), Gaps = 14/246 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L+ + D ++ + D + + Y + GK R V +
Sbjct: 1 MADDKKKFLEVFQQLKDELVQ---AEKDDAQVAIAVDWIDKMVEYNVPHGKLNRGLAVVD 57
Query: 61 CASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
N + + + + + + ++
Sbjct: 58 GMRALNPAGVSDDQMHRAMVVGWCIEWLQAAFLVWDDIMDESVTRRGQPCWFRNPKVEMV 117
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDE 170
A N L +I S K K + +L + H I + + +
Sbjct: 118 AINDGLVLECQIYSMLKKHCKAHAGYAELLEMFHEITYKTASGQLLDLITAPIGEVDLSK 177
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
+ +E + ++ + ++ + E LG FQ+ DD LD
Sbjct: 178 YTEEAYMRIVTYKTAYYTFYLPAAAAMHLSGVTDPAAFAKANEICEKLGQFFQIQDDYLD 237
Query: 230 CEEDLP 235
C D
Sbjct: 238 CYGDPA 243
>gi|63103163|gb|AAY33487.1| farnesyl diphosphate synthase [Mythimna unipuncta]
Length = 427
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 13/225 (5%)
Query: 24 LLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAI 79
L +T H+ + L ++Y + GKK R + + + +
Sbjct: 103 LTETGKHIDVPEAGKWLAKLLQYNVPNGKKNRGLATVMAYKMLEKKENLTPENIHLANMM 162
Query: 80 ECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKT 136
H L M+ +RRG P + + TAI + F +
Sbjct: 163 GWSVEMFHTHQLLLNDIMEGTEMRRGAPCWYKHPEVGLTAINDAALIQAAMFSTLKRHFN 222
Query: 137 QLKD-----NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++++L + L+ + +F E + + +
Sbjct: 223 NRNCYKTVLETFNEMLLKCSVGHFLENQMAKTDKPDLTQFTMEKYEAITKYKTSYHTFQM 282
Query: 192 ACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+M + + +G FQ+ DD LDC D
Sbjct: 283 PVTLALLMTGVEDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPA 327
>gi|87133512|gb|ABD24398.1| geranylgeranyl pyrophosphate synthase [Dietzia sp. CQ4]
Length = 382
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 52/203 (25%), Gaps = 17/203 (8%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG------ 103
GK +RS L + + + + D + + + R
Sbjct: 77 GKGMRSALFDAVYTHAGGRDEAVRAAACQALELLHEAFLVHDDVADGDDHRRGRPNLQGR 136
Query: 104 ----------KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
V ++ G+ LL A + R+ +
Sbjct: 137 TTTRGAEQGLSRETAAHVGMVGGLLGGDLLLVAAMGEFARLPVPAPVLHRAMAEVEGAVV 196
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMI-QKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+ G E + I + G ++A + LR
Sbjct: 197 ASIAGEYADVHGAAHGEPTTQEHALAIGAAKTAAYSVTLPMVLGVVLAGGPEEMIPPLRE 256
Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
G +LG +Q+ DD+L D
Sbjct: 257 TGRHLGTAYQVVDDVLGVFGDPA 279
>gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis KF147]
gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
subsp. lactis KF147]
Length = 319
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 8/229 (3%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L + ++ ++ L + SH+ +++D + GGK +R + +
Sbjct: 2 DLKNNFWKDYPELEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
++ L + A++E +H +L+HDD+ +D+ RRG T+ +Y A+ AG+ L
Sbjct: 62 FTVLSENERLALAASVEMMHIATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
F ++S +L + ++ + GQ+ +
Sbjct: 120 FIAVFRLMSEHSLELSNLTKNIGSIERLLGG-----ELGQLNHHFNLQQTLDDYIENISG 174
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L + +++ + +R G N+GI FQ+ DD LD
Sbjct: 175 KTGELFALSASVAPLIS-KNNTLTKRAYKIGMNIGISFQIMDDYLDYAS 222
>gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
cholerae INDRE 91/1]
Length = 232
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ D E + KT L A + GAI+ AS + ++ +G+ LG FQL
Sbjct: 60 MNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLI 119
Query: 225 DDLLDCEED 233
DD++D D
Sbjct: 120 DDVMDYTSD 128
>gi|182399|gb|AAA52423.1| farnesyl pyrophosphate synthetase (EC 2.5.1.1) [Homo sapiens]
Length = 353
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 1 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 121 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 181 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
Length = 298
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ++ ++ + Q RL GK++R+ L+ A + L+A
Sbjct: 2 LEAVERQIEHYINDLEDADARQLYSRL--------PAGKRLRARLILTIA----GSGLSA 49
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
++ A +E IH SL+HDD+ +D+ Y RRG+P+++ Y T+I+ G+ L + AF +
Sbjct: 50 VKTAAIVEMIHAASLLHDDV--IDDAYTRRGRPSINALYGNKTSIMFGDVLYSKAFYELV 107
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++ + + + G+ D+ KM
Sbjct: 108 ----------DIDRQVARSIANAVVLLSLGERQDVLLSESFNPDRDAYLKMIYQKTAALI 157
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A + ++E R +G NLGI FQ+ DD+LD +
Sbjct: 158 EAAAESAAILAGKDREAYRTYGRNLGIAFQMIDDILDITQSAE 200
>gi|321259617|ref|XP_003194529.1| isoprenoid biosynthesis-related protein [Cryptococcus gattii WM276]
gi|317461000|gb|ADV22742.1| Isoprenoid biosynthesis-related protein, putative [Cryptococcus
gattii WM276]
Length = 374
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 56/237 (23%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
R + + D + + ++ M + + + GGK R + + +
Sbjct: 30 RRARFEKVFDQIAEELLTYVKGEGMPKDAVEWYQKVLYHNTPGGKLNRGMSLVDTVEILK 89
Query: 67 V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ C+ + + + R + V I +
Sbjct: 90 GRELSEEEYTNAAILGWCVELLQAYFLVADDIMDQSVTRRGQPCWYRVPNVGNIAINDAF 149
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQ 176
+ A K LM + + ++F E
Sbjct: 150 MLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLVDLITAPEDHVDLNKFSLEKH 209
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLADDLLDCEE 232
++ M+ L LG FQ+ DD LDC
Sbjct: 210 HLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKILLPLGEYFQVQDDYLDCYG 266
>gi|61680786|pdb|1YQ7|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
Risedronate
gi|61680822|pdb|1YV5|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And
Risedronate
gi|158429256|pdb|2OPN|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-527
gi|162329947|pdb|2OPM|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-461
Length = 374
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 22 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 81
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 82 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 141
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 142 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 201
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 202 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 261
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 262 IQDDYLDLFGDPSVTGK 278
>gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1]
gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1]
Length = 201
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
QM D + KT L +C GA H+S+ + + G ++GI F
Sbjct: 28 DQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAF 87
Query: 222 QLADDLLDCEEDLP--KK 237
Q+ DD+LD D KK
Sbjct: 88 QVYDDILDYTADTETLKK 105
>gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
Length = 332
Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 9/214 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L +L ++ + + +AIR L GK IR L + L + N A +
Sbjct: 20 LQAVLEDMSASWHIGF-EEIDTAIRSQLNAGKLIRPALTLLFSRLSD-NPYNAKAISLGA 77
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +D +RRG ++ Q+ + TA+ AG+ LLT F ++
Sbjct: 78 SLELLHLATLIHDDIIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAA 137
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + + + +Q + + ++ + K KT AL + G I
Sbjct: 138 NKLALKALQEILFGELVQKQNRYNLSADFNSYLTQ------IKGKTAALFRLSVSFGVIS 191
Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ S+ E + GEN+G+ FQL DD LD E
Sbjct: 192 GDNYSEPLLETVSHLGENIGVTFQLLDDYLDFES 225
>gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SJM180]
gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
SJM180]
Length = 307
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S + ++ + K +RS L+
Sbjct: 3 EKQLKAIQNRIASWIKEIESGFIDELFSKIGPS--------KMLRSKLMLALLDEKIDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQALSNAVLRLSRGEI-------EDVFVGESFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG + G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDAKTLGK 214
>gi|296939580|gb|ADH95185.1| putative farnesyl diphosphate synthase [Aquilaria microcarpa]
Length = 342
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 77/241 (31%), Gaps = 14/241 (5%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S + ++ + +LL A + + + Y + GGK R V +
Sbjct: 2 ADLKSTFLDVYSKLKS---ELLNDPAFEFTDDSREWVDRMLDYNVPGGKLNRGLSVIDSY 58
Query: 63 SL---FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TA 116
L N + + +A+ + + + MDN + RRG+P A
Sbjct: 59 KLLKEGNELTEEEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRLPKVGLIA 118
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ G L + I+ + + + + G + + ++ E
Sbjct: 119 VNDGILLRNHISRILKNHFRGKAYYVDLLDLFNEVEFQTACGQMIDLITTLEGEKDLTKY 178
Query: 177 VFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ +M+ + + ++ ++GI FQ+ DD LDC
Sbjct: 179 SLSKHRRIVQYKTAYYSFYLPVACALLMSGENLDNHVDVKNILVDMGIYFQVQDDFLDCF 238
Query: 232 E 232
Sbjct: 239 G 239
>gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 306
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 7/224 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
+ +N D +++ Q + + + Y GK +R+ AS+
Sbjct: 1 MNKNVLEFDAAF-EMVKQETKRILHSGPSLISNYTGYLSDATGKMMRAS-ALLAASMNEE 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ V A + MD+ RRG T+ + + TA+I G+ LL A
Sbjct: 59 GMVPYDAVIFASAVEILHLATLVHDDIMDDADTRRGLITLQKKAGKRTAVICGDYLLAAA 118
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+S T K + + +G Q ++ ++ + + I KT A
Sbjct: 119 INELSKVVTDEKYKKFNFSRYVESIALG----ELRQNINNRNFRLKTFRYLSIIDGKTAA 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L A +GA+ A + + + R G GIIFQL DD +D E
Sbjct: 175 LFEAAYHAGALAGDADEQQIKLFRKLGRYTGIIFQLTDDCIDFE 218
>gi|297153619|gb|ADI03331.1| hypothetical protein SBI_00210 [Streptomyces bingchenggensis BCW-1]
Length = 466
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ S +M I + + + D E KT L
Sbjct: 29 YLLARCMQAAASLGASPMMSMAETLIDVCVGQMLESSQLFDPLRTEEDYLTAVSGKTARL 88
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL-PKK 237
M A GA+ +AS + ++ L FG NLG+ FQ+ DD+LD + K+
Sbjct: 89 MRTATTMGALQCNASNDVQDALESFGHNLGMAFQIWDDILDICSEETGKQ 138
>gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
Length = 323
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 10/217 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + + I + + S M + L Y + GK+IR V A L
Sbjct: 4 INQIKEPIAADISSFEEKFKSSMHSDAP-LLDRITHYIVKRKGKQIRPMFVFFAAKLCGG 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ R A +E +H +L+HDD+ +DN Y RRG +++ + A++ G+ LL
Sbjct: 63 ILESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINALWKNKIAVLVGDYLLAKG 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + I S+ + ++ LQ +M +D + D + + KT +
Sbjct: 121 LLLSVNNGEFRLLQIVSEAVKQMSEGELLQIEKVRRMDISEDLYFD------VIRQKTAS 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
L+ C GA A A E++R FGE +GI FQ+
Sbjct: 175 LIASCCACGAASAGADDETIEKMRLFGEKVGIAFQIK 211
>gi|23308797|ref|NP_599861.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
gi|21323391|dbj|BAB98019.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
ATCC 13032]
Length = 382
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 76/252 (30%), Gaps = 27/252 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + I L+ + + T + L A AL GGK IR ++ + +
Sbjct: 28 DFNDEIYRELNRICASLSQQCSTYQPEFRTCLDAAFQALRGGKLIRPRMLLGLYNTLVDD 87
Query: 69 H------------------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ G + + + + +
Sbjct: 88 DIEVKLNTVLQVAVALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILMHRTPESFAQIQR 147
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
H+ + + ++ GN L +I + +R +L+ T N + G
Sbjct: 148 DPEHLDWAQSNGLLMGNLFLAATHQIFARLDLPHHQRVRLLDLLNHTINDTIVGEFLDVG 207
Query: 165 LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
L + + + + + AI+A Q + ++ G NLGI +QL
Sbjct: 208 LSSKAISPNMDIALEMSRLKTATYTFELPMRAAAILAELPQEIETKIGEIGTNLGIAYQL 267
Query: 224 ADDLLDCEEDLP 235
DD L D
Sbjct: 268 QDDYLSTFGDAA 279
>gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
118893]
gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
118893]
Length = 491
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
+DN RR + ++ + A++AG+ LL A I+ + + + +
Sbjct: 248 HDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRDPEVIELLGTVMANL 307
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +K+ +L+ +C + A++ + E
Sbjct: 308 VEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRAAALLNQSGPEVAEA 367
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
FG NLG+ FQL DD+LD E+L K
Sbjct: 368 AYLFGRNLGLAFQLVDDMLDYTISGEELGK 397
>gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
Length = 347
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 13/208 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-I 100
AI GGK+IR ++ A + + + + +++
Sbjct: 50 AIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLK 109
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG +H+ Y +I AGN + ++I + + T + G
Sbjct: 110 RRGGSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENFFTTLSNLHLGQG 169
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + ++KT +L A AI+ + K+ F LG+
Sbjct: 170 IDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF-LKLGVY 228
Query: 221 FQLADDLLDC--------EED---LPKK 237
FQ+ DD+ + D KK
Sbjct: 229 FQIIDDIKNIKNKINGKEFGDDLIEGKK 256
>gi|157835943|pdb|2QIS|A Chain A, Crystal Structure Of Human Farnesyl Pyrophosphate Synthase
T210s Mutant Bound To Risedronate
Length = 374
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 22 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 81
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 82 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 141
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 142 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 201
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 202 GNVDLVRFTEKRYKSIVKYKSAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 261
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 262 IQDDYLDLFGDPSVTGK 278
>gi|239943138|ref|ZP_04695075.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 15998]
gi|239989596|ref|ZP_04710260.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 11379]
Length = 363
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 73/252 (28%), Gaps = 19/252 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-------LLSAIRYALLGGKKI 53
+ + +++ +R + D + R LL +L GGK+
Sbjct: 8 VTRQMQERIENYQRRFGVLFQDYFKRLRQEFDAPKLSRFTPRSFDLLE--DLSLRGGKRQ 65
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R + E A L + + A + L+ D D R G T + +E
Sbjct: 66 RVAFMYEAARLVTSEPVPGIDEAALSIELLQTHLLVHDDIIDDAPTRRGGTSTYYSYKEE 125
Query: 114 VTAI-----IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
A + + + + L T GQM D++
Sbjct: 126 FPEQPQTALGLALLAGDLAAFLSLRVLLEADLPLSLRQALVETQVTAGAATFVGQMYDLE 185
Query: 169 DEFIDETQVFMIQKMKTGALMC----FACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
+ M+ ++ + G + A + + LR + GI Q+
Sbjct: 186 RDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQM 245
Query: 224 ADDLLDCEEDLP 235
DD L D
Sbjct: 246 CDDYLSLFGDEK 257
>gi|207093075|ref|ZP_03240862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
HPKX_438_AG0C1]
Length = 270
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKQLKTIQNRIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTSTI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAKALSNAVLRLSRGEI-------EDVFVGECFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLDKNAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|312078710|ref|XP_003141856.1| polyprenyl synthetase [Loa loa]
gi|307762977|gb|EFO22211.1| polyprenyl synthetase [Loa loa]
Length = 346
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 62/229 (27%), Gaps = 2/229 (0%)
Query: 6 PSKLQENSKRIDTI-LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
++ + K I I + + DR+ +++ GGK RS L+
Sbjct: 14 KKQIVDAIKSIKRIAVQKFVTGLQEREAKCIRDRIEKLFDHSVCGGKYKRSILLVTAYKA 73
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
L L D + + + G
Sbjct: 74 LGGKQDEEQMKMITNTAACLELLQSFFLIEDDVMDEGVNRRGKPCWHRLEGIGMNGINDG 133
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
++S + + + + G + ++ + + Q
Sbjct: 134 LLLDCMVSYTLRSNRIPAAVRDAFDEARRVTVLGQILDSDTKGVEDCTWQRHRTITQHKT 193
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + A ++ A E L+ LG +FQ DD +DC D
Sbjct: 194 SHYTYFTPLQIAA-LSTAQPLIIEPLKRIAYQLGYLFQSKDDYMDCFGD 241
>gi|71042523|pdb|1ZW5|A Chain A, X-Ray Structure Of Farnesyl Diphosphate Synthase Protein
Length = 355
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 3 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 62
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 63 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 122
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 123 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 182
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 183 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 242
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 243 IQDDYLDLFGDPSVTGK 259
>gi|209571584|ref|NP_001129294.1| farnesyl pyrophosphate synthase isoform b [Homo sapiens]
gi|114560091|ref|XP_001160248.1| PREDICTED: farnesyl diphosphate synthase isoform 7 [Pan
troglodytes]
gi|114560093|ref|XP_001160446.1| PREDICTED: farnesyl diphosphate synthase isoform 11 [Pan
troglodytes]
gi|114560095|ref|XP_001160066.1| PREDICTED: farnesyl diphosphate synthase isoform 3 [Pan
troglodytes]
gi|114560097|ref|XP_001160341.1| PREDICTED: farnesyl diphosphate synthase isoform 9 [Pan
troglodytes]
Length = 353
Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 1 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 121 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 181 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|6016044|sp|O64905|FPPS_HELAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|3002542|gb|AAC78557.1| farnesyl pyrophosphate synthase [Helianthus annuus]
Length = 341
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 75/244 (30%), Gaps = 17/244 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L SK + T+ +LL A + + Y + GGK R V +
Sbjct: 1 MASDLKSKFLHVYQ---TLKSELLNDPAFEFHHDSRQWIDKMLDYNVPGGKLNRGLSVVD 57
Query: 61 C------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
A L + A +G IE + Y L+ DD+ MD + RRG+P
Sbjct: 58 SYQLLKGAELTDDEIFLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPKVG 115
Query: 115 T-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
A G L + I+ + + + G + + + E
Sbjct: 116 MIAANDGLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDL 175
Query: 174 ETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
I + +M + ++ +G FQ+ DD L
Sbjct: 176 SKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNVLVEMGTYFQVQDDYL 235
Query: 229 DCEE 232
DC
Sbjct: 236 DCFG 239
>gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52]
Length = 307
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 79/237 (33%), Gaps = 34/237 (14%)
Query: 4 GLPSKLQENSKRIDT-ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ +K+ K I++ +D+L + K +RS L+
Sbjct: 8 TIQNKIASWIKEIESGFIDELFSKIGPS--------------------KMLRSKLMLALL 47
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + +D +RR P+++ + + A++ G+
Sbjct: 48 DEKTDAILLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGDFNAVMLGDV 107
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
+ AF +S + L + + D+ + + I +
Sbjct: 108 FYSKAFFELSKMG-------ELIAKTLSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILE 160
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
KT + + +S AI+ + FG N G+ FQ+ DDLLD +D L K
Sbjct: 161 DKTAHFIEASLKSMAILLNKDAKIYA---DFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia
pastoris CBS 7435]
Length = 489
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+KT AL+ + S AI+A + FG NLG+ FQ+ DD+LD
Sbjct: 330 FDYYLHKTYLKTAALISKSSRSTAILAGCQEEVINNCYRFGRNLGLCFQIVDDMLDYT 387
>gi|4503685|ref|NP_001995.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens]
gi|209571582|ref|NP_001129293.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens]
gi|114560081|ref|XP_001160391.1| PREDICTED: farnesyl pyrophosphate synthase isoform 10 [Pan
troglodytes]
gi|114560083|ref|XP_001160109.1| PREDICTED: farnesyl diphosphate synthase isoform 4 [Pan
troglodytes]
gi|114560085|ref|XP_001160151.1| PREDICTED: farnesyl diphosphate synthase isoform 5 [Pan
troglodytes]
gi|114560087|ref|XP_001160203.1| PREDICTED: farnesyl diphosphate synthase isoform 6 [Pan
troglodytes]
gi|114560089|ref|XP_001160292.1| PREDICTED: farnesyl diphosphate synthase isoform 8 [Pan
troglodytes]
gi|215274250|sp|P14324|FPPS_HUMAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|14603061|gb|AAH10004.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[Homo sapiens]
gi|55957735|emb|CAI12715.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[Homo sapiens]
gi|119573461|gb|EAW53076.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase),
isoform CRA_b [Homo sapiens]
gi|119573462|gb|EAW53077.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase),
isoform CRA_b [Homo sapiens]
gi|119573463|gb|EAW53078.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase),
isoform CRA_b [Homo sapiens]
gi|123993591|gb|ABM84397.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[synthetic construct]
gi|123998535|gb|ABM86869.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[synthetic construct]
gi|158255604|dbj|BAF83773.1| unnamed protein product [Homo sapiens]
gi|168269804|dbj|BAG10029.1| farnesyl pyrophosphate synthetase [synthetic construct]
Length = 419
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 67 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 126
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 186
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 187 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 246
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 247 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 306
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 307 IQDDYLDLFGDPSVTGK 323
>gi|40788949|dbj|BAA03523.2| KIAA1293 [Homo sapiens]
Length = 420
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 68 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 127
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 128 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 188 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 248 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 307
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 308 IQDDYLDLFGDPSVTGK 324
>gi|297571334|ref|YP_003697108.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296931681|gb|ADH92489.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 350
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 65/250 (26%), Gaps = 24/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFLVTECASLF 65
+ + + L D+L +T + L ++ GGK+ R+ V
Sbjct: 4 SDFRHAVSSRLTDVLSVVPPFSETARDSELFQEFIAPAVALSSGGKRTRALCVAGGFEAI 63
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR--------RGKPTVHIQYDEVTAI 117
+ A ++ S + D D R + + A+
Sbjct: 64 SRQTQDLPLHAAVAVELYQASALVHDDIIDDAETRRGIPAPHRLFAAQHEQLGFIGEAAL 123
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNI------------RSQLMLSLTHNIGLQGMLGGQML 165
+ + ++S + +++ + L
Sbjct: 124 FGQHSGVLLGDYLLSCGGEEFAKQDAPDGAFRRAFALFNEMASETAFGQYMDMRAEFTPL 183
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + ++ + G +A + RL F LG FQL D
Sbjct: 184 SNDADCAVDDAFLVLLHKSARYSIELPVLIGVALAGGDDDAAARLTLFTRPLGEAFQLRD 243
Query: 226 DLLDCEEDLP 235
D L D
Sbjct: 244 DELGIFGDPA 253
>gi|125571728|gb|EAZ13243.1| hypothetical protein OsJ_03166 [Oryza sativa Japonica Group]
Length = 375
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 14/238 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
E+ + ID I+ L ++ + + Y +LGGK R V + +
Sbjct: 40 DESLQWIDRIIS--LTYECRWIKELRVAQSATKMLDYNVLGGKCNRGISVIDSFKMLKGT 97
Query: 69 HLTALRV---GAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNG 122
+ + + + + MDN RRG+P A+ G
Sbjct: 98 DVLNKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGII 157
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
L + I+ + + + G L + + E + +
Sbjct: 158 LRNHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHR 217
Query: 183 -----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + + ++ +G FQ+ DD LDC D
Sbjct: 218 RIVQYKTAYYSFYLPVACALLLSGENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPE 275
>gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase
[Bifidobacterium gallicum DSM 20093]
gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase
[Bifidobacterium gallicum DSM 20093]
Length = 385
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 53/281 (18%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQT-----------------ASHMQTQHNDRLLSAI 43
M+ + ++ + I+ + +L+ A+ + + L +
Sbjct: 1 MSATI---IESDLALIEQRIGELVRSHMDVQLNSYANDTNPTACANVIASSLEPMLNAVA 57
Query: 44 RYALL---GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD---------- 90
R A++ GGK++R+ L+ E + T + D
Sbjct: 58 RQAVISSEGGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQSVLDLACAIELFQT 117
Query: 91 ----DLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
+D+ +RRGKP H + G GL +++++ + +
Sbjct: 118 AALVHDDIIDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLATACSVVASEASHA 177
Query: 146 LMLSLTHNIGLQGMLGG-----------QMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
L M + + + D + + KT +
Sbjct: 178 LPDPNAIERAFMRMQQEVEIGQVLDLAIERMSLDDAQALADASLNVFRWKTASYTTITPL 237
Query: 195 SGAIMAHASQNEKERLR---CFGENLGIIFQLADDLLDCEE 232
A++A + E LR G LGI FQ+ADDL+D
Sbjct: 238 LLAMLAAGMPED-EALRHAIDIGLPLGIAFQIADDLIDVTG 277
>gi|13022122|gb|AAK11650.1| unknown [Tolypothrix sp. PCC 7601]
Length = 69
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
I KTGAL+ + SGA++ AS +RL + ++G+ FQ+ D++LD
Sbjct: 12 DYIHTHKTGALLETSVLSGALLTGASDAVLQRLSVYAHHIGLAFQIVDNVLDIT 65
>gi|45190485|ref|NP_984739.1| AEL122Wp [Ashbya gossypii ATCC 10895]
gi|44983427|gb|AAS52563.1| AEL122Wp [Ashbya gossypii ATCC 10895]
Length = 351
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 70/250 (28%), Gaps = 23/250 (9%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-- 62
++N K+ L+ Q + D ++ Y GGK R V +
Sbjct: 4 EDNRKKFVDEFPSLVSQLTQSLREYGIPQDAIDWYEKSLNYNTPGGKLNRGLSVVDTYVI 63
Query: 63 -----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
S ++ RV C+ M + I R + +EV +
Sbjct: 64 LKNCKSPLDLPVDEYRRVALLGWCVELLQAYFLVADDMMDKSITRRGQPCWYRVEEVGDM 123
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------MLGGQMLDIQDE 170
+ + A + L+ L M + + ++
Sbjct: 124 AINDAFMLEAAIYCLLKRNFRDQPYYVDLLELLHDVTFQTEVGQLLDLMTAPEFIVDLNK 183
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLD 229
F + +++ A + + + R LG FQ+ DD LD
Sbjct: 184 FSLQRHSYIVIFKTAYYSFYLPVALAMYAAGVNDERDFAQAREVLLPLGEYFQIQDDYLD 243
Query: 230 CEE---DLPK 236
C D+ K
Sbjct: 244 CFGRPEDIGK 253
>gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata]
Length = 471
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
L G + I +KT AL+ + + AI++ A
Sbjct: 285 LKEHDYRVATPEATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGARDPVI 344
Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
E FG N+GI FQL DDLLD +DL K
Sbjct: 345 EECYSFGRNIGICFQLVDDLLDFSVSAKDLGK 376
>gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14]
gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14]
Length = 291
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 12/214 (5%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ ID +L D L + + + L+ + ++GGK+IR L
Sbjct: 35 RQAIDDVLKDFLEKRRKNCEPSQMGGLIELLADFMVGGKRIRPILTMLGWQAVTGEAAGD 94
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII------------AG 120
V A ++ MD+ RRG+PT+H + ++ G
Sbjct: 95 TVVQVAASLEMFHAFALIHDDIMDDSDTRRGRPTIHRALADNSSGDRTRRFGLGAAVLLG 154
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ T++ +I+ + + +++ + G + + +
Sbjct: 155 DLAFTWSDQILHTAGLTSEQTAAVLPLVTEMRTEVMLGQYLDLQATGALTDDVDATLTVN 214
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+ + GA +A A +
Sbjct: 215 RYKTAKYTIERPLHIGAALAGADPRAMAACTEYA 248
>gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
113480]
gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
113480]
Length = 488
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
+DN RR + ++ + A++AG+ LL A I+ + + + +
Sbjct: 245 HDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRDPEVIELLGTVMANL 304
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +K+ +L+ +C + A++ + E
Sbjct: 305 VEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRAAALLNQSGPEVAEA 364
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
FG NLG+ FQL DD+LD E+L K
Sbjct: 365 AYLFGRNLGLAFQLVDDMLDYTVSGEELGK 394
>gi|213028306|ref|ZP_03342753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 117
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ A GA+ A +N L + E++G+ FQ+ DD+LD D L K+
Sbjct: 4 IRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKR 56
>gi|223947205|gb|ACN27686.1| unknown [Zea mays]
Length = 316
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 55/210 (26%), Gaps = 11/210 (5%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDL- 92
+ Y +LGGK R V + L + + + +
Sbjct: 7 PPFKQMVDYNVLGGKCNRGLSVVDSYKLLKGADALGEEETFLACTLGWCIEWLQAFFLVL 66
Query: 93 -PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
MD+ + RRG+P A G L + I+ + +
Sbjct: 67 DDIMDDSHTRRGQPCWFRVPQVGLIAANDGIILRNHISRILRRHFKGKPYYADLLDLFNE 126
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQN 205
G L + + E + +++ + +
Sbjct: 127 VEFKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSFYLPVACALLLSGENLD 186
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +G FQ+ DD LDC D
Sbjct: 187 NYGDVENILVEMGTYFQVQDDYLDCYGDPE 216
>gi|291446614|ref|ZP_06586004.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291349561|gb|EFE76465.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 359
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 73/252 (28%), Gaps = 19/252 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-------LLSAIRYALLGGKKI 53
+ + +++ +R + D + R LL +L GGK+
Sbjct: 4 VTRQMQERIENYQRRFGVLFQDYFKRLRQEFDAPKLSRFTPRSFDLLE--DLSLRGGKRQ 61
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R + E A L + + A + L+ D D R G T + +E
Sbjct: 62 RVAFMYEAARLVTSEPVPGIDEAALSIELLQTHLLVHDDIIDDAPTRRGGTSTYYSYKEE 121
Query: 114 VTAI-----IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
A + + + + L T GQM D++
Sbjct: 122 FPEQPQTALGLALLAGDLAAFLSLRVLLEADLPLSLRQALVETQVTAGAATFVGQMYDLE 181
Query: 169 DEFIDETQVFMIQKMKTGALMC----FACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
+ M+ ++ + G + A + + LR + GI Q+
Sbjct: 182 RDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQM 241
Query: 224 ADDLLDCEEDLP 235
DD L D
Sbjct: 242 CDDYLSLFGDEK 253
>gi|75233326|sp|Q7XYS9|FPPS1_ARTSI RecName: Full=Farnesyl diphosphate synthase 1; Includes: RecName:
Full=Dimethylallyltranstransferase; Includes: RecName:
Full=(2E,6E)-farnesyl diphosphate synthase
gi|32329199|gb|AAP74720.1| farnesyl diphosphate synthase [Artemisia spiciformis]
Length = 346
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 65/239 (27%), Gaps = 13/239 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S + K DT+ DL+ A + + Y + GGK R V +
Sbjct: 8 DLKS---KFLKVYDTLKSDLINDPAFEFDDDSRQWIQKMLDYNVPGGKLNRGLSVVDSYQ 64
Query: 64 LFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AII 118
L + L + MD + RRG+P A
Sbjct: 65 LLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMIAAN 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
G L + I+ + + + G + + + E
Sbjct: 125 DGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSL 184
Query: 179 MIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I + +M ++ ++ +G FQ+ DD LDC
Sbjct: 185 SIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFG 243
>gi|302686592|ref|XP_003032976.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8]
gi|300106670|gb|EFI98073.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8]
Length = 347
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 62/238 (26%), Gaps = 13/238 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+L+E + ++ + L+ A M + + Y GGK R V +
Sbjct: 3 KQELREKFNDVYKLIREELVAHIRAQGMPEDAVEWYARNLDYNTPGGKLNRGLSVVDSTK 62
Query: 64 LFNVNHLT--ALRVGAAIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + T + A + + + + I R + V I
Sbjct: 63 ILLGDKFTEEHYKQAAILGWCVELLQAFFLVSDDIMDSSITRRGQPCWYRTPNVGMIAIN 122
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFID 173
+ + A +L+ M + + F
Sbjct: 123 DAFMLEAAIYHLLKVHFKSQAYYVELLELFHETTHQTEMGQLIDLITAPEDHVDLNRFSL 182
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++Q + + S E LG FQ+ DD LD
Sbjct: 183 KKHALIVQYKTSYYSFYLPVALAFHLCGITSPKAFETALEILLPLGEYFQIQDDYLDY 240
>gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
Length = 274
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 86/220 (39%), Gaps = 18/220 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECAS 63
+Q I+ ++ L + + + + + + L
Sbjct: 1 MQPYWAAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACE 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ AAI +H + +H+ LP D KP + +Y ++ G+G+
Sbjct: 54 LVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDGI 112
Query: 124 LTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
+ + FE+++ P + ++++ ++ G +GM+ G + + + +
Sbjct: 113 VPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIE 172
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ K K G + GAI+ A++ E ++LR FG G
Sbjct: 173 YVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 212
>gi|160286554|pdb|3B7L|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And
Minodronate
Length = 356
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 72/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 4 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 63
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 64 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 123
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 124 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 183
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 184 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 243
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 244 IQDDYLDLFGDPSVTGK 260
>gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica]
gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase,
mitochondrial; Short=HPS; Flags: Precursor
gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica]
Length = 452
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +DN RRG PT ++ + AI+AG+ LL A I+ + +
Sbjct: 202 MIHTASLLHDDVIDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIARLRNAEVIEL 261
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S + +L +Q +KT +LM +C + A+++ A
Sbjct: 262 LSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTASLMSKSCRAAAVLSGA 321
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
+ FG+NLG+ FQ+ DD+LD E L K
Sbjct: 322 RNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGK 358
>gi|75233327|sp|Q7XYT0|FPPS2_ARTSI RecName: Full=Farnesyl diphosphate synthase 2; Includes: RecName:
Full=Dimethylallyltranstransferase; Includes: RecName:
Full=(2E,6E)-farnesyl diphosphate synthase
gi|32329197|gb|AAP74719.1| farnesyl diphosphate synthase [Artemisia spiciformis]
Length = 342
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L S+ + D++ DL+ A + + + Y + GGK R V +
Sbjct: 1 MSIDLKSRFLQVY---DSLKSDLIHDPAFEFDDDSRNWVERMLDYNVPGGKLNRGLSVVD 57
Query: 61 CASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNG---YIRRGKPTVHIQY 111
L A +G IE + Y L+ DD+ + +
Sbjct: 58 SYKLLKQEELTEDEVFLACALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLPKVGMI 117
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
++ N + + + T + + ++ +
Sbjct: 118 AVNDGVVLRNHIPRILKKHFRGKAYYADLLDLFNEVEFQTASGQMIDLITTLFGQKELSK 177
Query: 172 IDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ I K KT +M + ++ +++ +G FQ+ DD LDC
Sbjct: 178 YSLSTHQRIVKFKTAYYSFYLPVACALLMFGENLDDHVQVKDVLVEMGTYFQVQDDYLDC 237
Query: 231 EE 232
Sbjct: 238 FG 239
>gi|197097558|ref|NP_001125620.1| farnesyl pyrophosphate synthase [Pongo abelii]
gi|55728661|emb|CAH91070.1| hypothetical protein [Pongo abelii]
Length = 419
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 72/251 (28%), Gaps = 18/251 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL + Y +GGK R
Sbjct: 67 MNGDQKSDVYAQEKQDFVQHFSQIVRMLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126
Query: 55 SFLVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 127 GLTVVVAFRELVQPRKQDADSLQRARTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 186
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 187 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 246
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 247 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 306
Query: 223 LADDLLDCEED 233
+ DD LD D
Sbjct: 307 IQDDYLDLFGD 317
>gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
HPAG1]
gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
HPAG1]
Length = 307
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 77/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKQLKTIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + L + D+ + + I + KT +
Sbjct: 115 ELSKMG-------EVIAQALSNAVLRLSRGEIEDVFVGGSFNSDKQKYWCILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|291585672|gb|ADE18770.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis]
gi|291585674|gb|ADE18771.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis]
Length = 342
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 71/225 (31%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + Y + GGK R V + L + A
Sbjct: 18 ELLHDPAFEWSDDSRQWADRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDELFLASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG+P A G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILRK 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + ++ E + +
Sbjct: 136 HFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+M + + ++ ++G FQ+ DD LDC D
Sbjct: 196 FYLPVACALLMMGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGD 240
>gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM + A+++ A + + FG NLG+ FQ+ DD+LD
Sbjct: 316 FEYYLHKTYLKTASLMSKLARAAAVLSGAQDDVVQNCYDFGRNLGLCFQIVDDMLDYTS 374
>gi|158430745|pdb|2RAH|A Chain A, Human Fdps Synthase In Complex With Novel Inhibitor
gi|160286194|pdb|2VF6|A Chain A, Human Fdps Synthase In Complex With Minodronate
Length = 378
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 71/251 (28%), Gaps = 18/251 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 26 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 85
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 86 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 145
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 146 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 205
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 206 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 265
Query: 223 LADDLLDCEED 233
+ DD LD D
Sbjct: 266 IQDDYLDLFGD 276
>gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 742
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 68/210 (32%), Gaps = 11/210 (5%)
Query: 37 DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
+ L +R + GGK RS + C + + + R A E +H SLI DD+
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLIFVSCCNALSRQYFDCSRYIAVAELLHVGSLIIDDIQDN 492
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
V + + I + I L
Sbjct: 493 SVVRRGGKCVHVEYGVATAINAGSACYFMGPRAARIQDLPPEKASRIYKLYFDVLLAGHA 552
Query: 156 LQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGALMCFACESGAIMAHASQNEKE 208
QG+ ++ + + ++ I KTGA + C ++ E
Sbjct: 553 GQGLDIYRLDYLMPKVVETGDTSTLVDALDAIHTYKTGAAVGALCSMACVLCETPTVLSE 612
Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLP 235
+ FG LG+ FQ+ DD L+ E DL
Sbjct: 613 AMERFGLTLGLAFQIVDDALNIRGFEGDLK 642
>gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori B38]
gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
synthetase) (OPP synthetase) [Helicobacter pylori B38]
Length = 307
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ + I + + + S ++ + K +RS L+
Sbjct: 3 EKQLQAIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +D +RR P+++ + A++ G+ + AF
Sbjct: 55 SLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + L + D+ + + I + KT +
Sbjct: 115 ELSKMG-------EAIAQILSNAVLRLSRGEIEDVFVGGSFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|322792499|gb|EFZ16466.1| hypothetical protein SINV_00774 [Solenopsis invicta]
Length = 309
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 13/210 (6%)
Query: 39 LLSAIRYALLGGKKIRSFLVTECASL------FNVNHLTALRVGAAIECIHCYSLIHDDL 92
LL + Y + GGK+ R+ ++ L N A + E + L+ DD+
Sbjct: 2 LLQVLEYNVPGGKQFRALILIHAYQLLANEQVTKENIRLARILAWCGELMQAAGLMIDDI 61
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQL 146
+ ++ A + + + + L+ L
Sbjct: 62 QDKSVLRRGQPCWYLNDNVGLSVITDALKLKNSVYYILQKYFKGKTCYVNLLETFHNIIL 121
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQN 205
+ LQ + F + +++ + +A
Sbjct: 122 KTLDGQILDLQLSKNFSKKLNLNLFTMDQYKCIVRNKTSYYSFVCPVFLAMNLAGIKDPE 181
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ +G +FQ+ DD LD D
Sbjct: 182 KFKQAETILLEIGHLFQVQDDFLDFFGDSE 211
>gi|322829693|gb|EFZ32996.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 362
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 30/257 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+ L + L D L + L + LGGK R V
Sbjct: 2 ASMERFLSVY-DEVQAFLLDQLQS-KYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 59
Query: 59 ---TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDE 113
L + + H + MD +RRGKP +
Sbjct: 60 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIG 155
T +G++ ++ I + + + S+ +
Sbjct: 120 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNK 179
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFG 214
L + M EF +++ T G +++ A+ + + L
Sbjct: 180 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLISEAAASVEMNLVERVA 239
Query: 215 ENLGIIFQLADDLLDCE 231
+G FQ+ DD++DC
Sbjct: 240 HLIGEYFQVQDDVMDCF 256
>gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS
112818]
gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS
127.97]
Length = 491
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
+DN RR + ++ + A++AG+ LL A I+ + + + +
Sbjct: 248 HDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRDPEVIELLGTVMANL 307
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +K+ +L+ +C + A++ + + E
Sbjct: 308 VEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRAAALLNQSGPDVAEA 367
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
FG NLG+ FQL DD+LD E+L K
Sbjct: 368 AYLFGRNLGLAFQLVDDMLDYTISGEELGK 397
>gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
Length = 427
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
+DN RR + ++ + A++AG+ LL A I+ + + + +
Sbjct: 184 HDDVIDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIARLRDPEVIELLGTVMANL 243
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + + +K+ +L+ +C + A++ + + E
Sbjct: 244 VEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLISKSCRAAALLNQSGPDVAEA 303
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
FG NLG+ FQL DD+LD E+L K
Sbjct: 304 AYLFGRNLGLAFQLVDDMLDYTISGEELGK 333
>gi|1346028|sp|P49351|FPPS1_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 1; AltName:
Full=Dimethylallyltranstransferase 1; AltName:
Full=Farnesyl diphosphate synthase 1; AltName:
Full=Geranyltranstransferase 1
gi|558923|gb|AAA86687.1| farnesyl pyrophosphate synthase [Lupinus albus]
Length = 342
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 64/222 (28%), Gaps = 11/222 (4%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV---GAA 78
+LL A L + Y + GGK R V + L H +A
Sbjct: 18 ELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASA 77
Query: 79 IECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPK 135
+ + + + MDN + RRG+P A G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHF 137
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMC 190
+ + G + + ++ E + +
Sbjct: 138 RGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFY 197
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+M + + ++ ++G FQ+ DD LDC
Sbjct: 198 LPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFG 239
>gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
Length = 288
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN- 68
+ + RI+ L D + A T RL A+RYA+ G ++R L A+ +
Sbjct: 2 DVTNRIERALTDAIGLAA---VTGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
GAA+E +HC SL+HDDLP D RRG+P+VH + E A++ G+ L+
Sbjct: 59 PAATEAAGAALELMHCASLVHDDLPCFDGAATRRGRPSVHKAFGEPLAVLTGDALI---- 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ +L G+ G + E E + + KTGAL
Sbjct: 115 -VLAFQTIARVTCAPERLAALTMTIGQAVGVPFGIVAGQAWECESEINLAHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A +GA A A R GE +G +Q+
Sbjct: 174 FVAATAAGAASAGADPE---PWRLVGEKIGEAYQV 205
>gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
Length = 307
Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ + I + + + S ++ + K +RS L+
Sbjct: 3 EKRLQAIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + L + + D+ + + I + KT +
Sbjct: 115 ELSKMG-------EAIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLNKNAK---MYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|149245192|ref|XP_001527130.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449524|gb|EDK43780.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 351
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 68/233 (29%), Gaps = 16/233 (6%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN----- 68
+ I L ++L M + D +++Y GGK R V + ++ N
Sbjct: 16 QDIVEELTEILKSYK--MPQEAIDWFNKSLQYNTPGGKLNRGLSVVDTYAILNNTSADKL 73
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ A + + + + + E IA N
Sbjct: 74 DDAQYKKAAILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLAEGVGNIAINDSFMLEG 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQVFMI 180
I + + + +L L H + Q + + +F F++
Sbjct: 134 AIYEILRKHFRQDSYYVDLLDLFHEVTFQTELGQLLDLVTADEEHVDLSKFSLAKHSFIV 193
Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M+ + + ++++ LG FQ+ DD LDC
Sbjct: 194 IFKTAYYSFYLPVALAMYMSGISDAKDLQQVKDILIPLGEYFQIQDDFLDCFG 246
>gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92]
gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92]
Length = 297
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
+ D+ + + KT L+ GAI+A + + R +G+NLG+ FQ+ DD+L
Sbjct: 136 NFNDDKQKYMDMIYYKTAVLIEATAACGAILAGLDE---TKFRIYGKNLGLAFQIIDDVL 192
Query: 229 DCEE 232
D +
Sbjct: 193 DITQ 196
>gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767]
gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii]
Length = 483
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
G++ + +KT +LM + + +++ + N E FG NLG+ F
Sbjct: 312 GEVDHNTNVSAAFEYYLHKTYLKTASLMSKSSRAAGVLSGSQDNIIENCYDFGRNLGLCF 371
Query: 222 QLADDLLDCEE 232
Q+ DD+LD
Sbjct: 372 QIVDDMLDYTS 382
>gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
Length = 195
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ D E + KT L A + GAI+ A ++ + L+ +G+ LG FQL
Sbjct: 23 MNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLI 82
Query: 225 DDLLDCEED 233
DD++D D
Sbjct: 83 DDVMDYTSD 91
>gi|332220681|ref|XP_003259483.1| PREDICTED: farnesyl pyrophosphate synthase [Nomascus leucogenys]
Length = 419
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 73/257 (28%), Gaps = 21/257 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL + Y +GGK R
Sbjct: 67 MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 127 GLAVVVAFRELVEPRKQDADSLQRAWTVGWCVELVRGXLLVADDIMDSSLTRRGQICWYQ 186
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 187 KPGVGLDAINDANLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 246
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 247 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHTNAKKILLEMGEFFQ 306
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 307 IQDDYLDLFGDPSVTGK 323
>gi|324515875|gb|ADY46342.1| Farnesyl pyrophosphate synthase [Ascaris suum]
Length = 338
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 63/212 (29%), Gaps = 16/212 (7%)
Query: 36 NDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLP 93
+R+ +A++GGK +R L+ + + +V C+
Sbjct: 34 ANRIDKLFEHAVIGGKCVRGRLLVAAYNALDRHATRERIQQVATVGACLEILQAFFLIFD 93
Query: 94 SMDNGYIRRGKPTVHIQYDEV--TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ + R +V AI G L + E+++ + +
Sbjct: 94 DVMDRSTTRRGKPCWHTLPDVGLNAINDGLLLDSVINEVLNDVLENDPNKDTVSSIFLRA 153
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH----ASQNEK 207
+ + G + + E ++ + ++A A + E
Sbjct: 154 KQMTVIGQMLDNSTSGLKDCTWERYGDIVTHKTSYYTCFAPLRVAMLLADRFMYADETE- 212
Query: 208 ERLRCFGENLGIIFQLADDLLDCEED---LPK 236
LG +FQ DD LDC D K
Sbjct: 213 ----RIAFKLGYLFQAQDDYLDCFGDPLVTGK 240
>gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895]
gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895]
Length = 475
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+KT AL+ +C + A+++ A + FG+NLGI FQL D
Sbjct: 308 HEVMIETAFDYYLHKTYLKTAALISKSCRAAAVLSGARDPILDECYHFGKNLGICFQLVD 367
Query: 226 DLLDCE--EDLPK 236
D+LD +L K
Sbjct: 368 DMLDFTTSGELGK 380
>gi|183448387|pdb|3CP6|A Chain A, Crystal Structure Of Human Farnesyl Diphosphate Synthase
(T201a Mutant) Complexed With Mg And Biphosphonate
Inhibitor
Length = 376
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 71/251 (28%), Gaps = 18/251 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 24 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 83
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 84 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 143
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 144 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 203
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 204 GNVDLVRFTEKRYKSIVKYKAAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 263
Query: 223 LADDLLDCEED 233
+ DD LD D
Sbjct: 264 IQDDYLDLFGD 274
>gi|73654128|gb|AAZ79359.1| farnesyl diphosphate synthase [Citromicrobium sp. JL-364]
Length = 146
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
Q+ + + KTGAL+ + GA+ A S+ L + + LG+ FQ+ DD+LD E
Sbjct: 90 QLETMHRHKTGALIETSVRIGALTAPSVSEQALASLTEYAKALGLAFQVQDDILDVE 146
>gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
16992]
gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
16992]
Length = 394
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 87/255 (34%), Gaps = 26/255 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSF 56
M S L++ RI +++ D L S + + A++ GGK++R+
Sbjct: 33 MTSS--SDLEQIESRIVSLVKDFAFLHVDDSVASSCKPIADMVAMQAVTSSEGGKRLRAL 90
Query: 57 LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
L + F + A+E +L+HDD+ + +
Sbjct: 91 LTLDSFRAFASEDVLERDFDALLDLACAVEVFQTGALVHDDIIDDSDLRRGKPSAH-RAF 149
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------ 164
+ + G+GL +++++ + D S+L L M
Sbjct: 150 STDTHSETIGHGLGIMLGDMLATASVDIADKAASKLTYGSNVVAALLNMHREVEVGQVLD 209
Query: 165 -----LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKER-LRCFGENL 217
+ D + + KT E G + A S+++ R G L
Sbjct: 210 LAVELNPLNDPNELVEASLNVFRWKTASYTTIAPLEFGMLAAGLSKDDARRHALAVGLPL 269
Query: 218 GIIFQLADDLLDCEE 232
G+ FQLADDLLD
Sbjct: 270 GLAFQLADDLLDVVG 284
>gi|254566651|ref|XP_002490436.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|238030232|emb|CAY68155.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115]
gi|328350830|emb|CCA37230.1| dimethylallyltranstransferase [Pichia pastoris CBS 7435]
Length = 354
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 59/224 (26%), Gaps = 18/224 (8%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
M + ++ Y GGK R V + + + +
Sbjct: 33 MPADAINWFKRSLNYNTPGGKLNRGISVVDTYVILKGYKSWDELSAEEFKKAAILGWCVE 92
Query: 91 DL-------PSMDNGYIRRGKPTVHIQYDE--VTAIIAGNGLLTYAFEIISSPKTQLKDN 141
L M + I R + + AI L ++I+ +
Sbjct: 93 LLQAYFLVADDMMDQSITRRGQPCWYKVENVGNIAINDSFMLEGAIYKILRKYFKKESYY 152
Query: 142 IRSQLMLSLTHNIG-----LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+L L + + +F F++
Sbjct: 153 ADLLDLLHEVTFQTELGQLLDLITAPEDHVDLSKFTPAKHSFIVIFKTAYYSFYLPVVMA 212
Query: 197 AIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++ + + + ++ LG FQ+ DD LDC D+ K
Sbjct: 213 MYLSGITHEKDLQQAEHILIPLGEYFQIQDDYLDCFGKPEDIGK 256
>gi|50302727|ref|XP_451300.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|1346032|sp|P49349|FPPS_KLULA RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|453166|emb|CAA53614.1| Farnesyldiphosphatesynthetase [Kluyveromyces lactis]
gi|49640431|emb|CAH02888.1| KLLA0A06732p [Kluyveromyces lactis]
gi|1092509|prf||2024223A farnesyl diphosphate synthase
Length = 349
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 68/254 (26%), Gaps = 21/254 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+ L+ + L D+L M + + ++ Y GGK R V +
Sbjct: 1 MSDNRAQFLEVFPSLV-QELRDILA--GYGMPEEAIEWYEKSLNYNTPGGKLNRGLSVVD 57
Query: 61 CASLFNVNHLTALRVGAAIE------CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+L + + + + + E
Sbjct: 58 TYALLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKVEN 117
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLD 166
IA N I K + +L L H++ Q + +
Sbjct: 118 VGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKV 177
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLAD 225
+F E F++ A A + ++ LG FQ+ D
Sbjct: 178 DLSKFSLEKHSFIVIFKTAYYSFYLAVALAMFAAGITDSKDLKQASDVLIPLGEYFQIQD 237
Query: 226 DLLDCEE---DLPK 236
D LDC D+ K
Sbjct: 238 DFLDCFGKPEDIGK 251
>gi|1346029|sp|P49352|FPPS2_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 2; AltName:
Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Geranyltranstransferase 2
gi|710350|gb|AAA87729.1| farnesyl pyrophosphate synthase [Lupinus albus]
Length = 342
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 69/224 (30%), Gaps = 15/224 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A T + + Y + GGK R V + L + A
Sbjct: 18 ELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKDGQELNDEEIFLASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI-IAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MDN + RRG P G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRILKK 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGAL 188
+ + + G + + ++ E + +
Sbjct: 136 HFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+M + + ++ +G FQ+ DD LDC
Sbjct: 196 FYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFG 239
>gi|1749416|dbj|BAA13767.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 339
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 15/233 (6%)
Query: 19 ILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
+D+++ + + + +++ + LGGK R V + + ++ ++
Sbjct: 2 FVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEILLGHPLDEAAYMK 61
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + R V I + + +
Sbjct: 62 AAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLK 121
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGG-------QMLDIQDEFIDETQVFMIQKMKTGA 187
K +++ L+ + + +F + F++
Sbjct: 122 KHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFY 181
Query: 188 LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E +A A+ + + LG FQ+ DD LDC D K
Sbjct: 182 SFYLPVELAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGDPTVTGK 234
>gi|24796660|gb|AAN62522.1| farnesyl pyrophosphate synthetase [Eucommia ulmoides]
Length = 319
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 22/249 (8%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC---- 61
++L++ + ++L +LL A + + + + Y + GGK R V +
Sbjct: 2 AELKKEFLNVYSVLKKELLHDPAFSLTEDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLL 61
Query: 62 ---------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
A L + +G +E + +L+ DD+ MD+ + RRG+ +
Sbjct: 62 KELSSSKKGAQLTESEIFHSSVLGWCVEWLQACALVLDDI--MDSSHTRRGQMCWYKLPK 119
Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI G L + I+ + + + G + + + E
Sbjct: 120 VGMIAINDGLILRNHVPRILKKHFRSKPYYLELLDLFHEVECQTVGGQMIDLITTLVGEI 179
Query: 172 IDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + +M ++ +G FQ+ DD
Sbjct: 180 DLSEYSLPTHRQITVSKTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDD 239
Query: 227 LLDCEEDLP 235
LDC D
Sbjct: 240 YLDCFGDPE 248
>gi|50552378|ref|XP_503599.1| YALI0E05753p [Yarrowia lipolytica]
gi|49649468|emb|CAG79180.1| YALI0E05753p [Yarrowia lipolytica]
Length = 344
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 69/242 (28%), Gaps = 14/242 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+K + RI L LL + +++Y +GGK R V + L
Sbjct: 3 KAKFESVFPRISEELVQLLRDEG--LPQDAVQWFSDSLQYNCVGGKLNRGLSVVDTYQLL 60
Query: 66 NV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + MD RRG+P +++ I
Sbjct: 61 TGKKELDDEEYYRLALLGWLIELLQAFFLVSDDIMDESKTRRGQPCWYLKPKVGMIAIND 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDE 174
+L I+ + + + L + + + + + F +
Sbjct: 121 AFMLESGIYILLKKHFRQEKYYIDLVELFHDISFKTELGQLVDLLTAPEDEVDLNRFSLD 180
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
F+++ +A + + ++ LG FQ+ DD LD D
Sbjct: 181 KHSFIVRYKTAYYSFYLPVVLAMYVAGITNPKDLQQAMDVLIPLGEYFQVQDDYLDNFGD 240
Query: 234 LP 235
Sbjct: 241 PE 242
>gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 503
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 6/209 (2%)
Query: 27 TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
A ++ LL Y GK+IRS ++ +V V + +H
Sbjct: 189 QAEILRCVSVKILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTA 248
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D +RRG P H Y I + N + A++ +S + +
Sbjct: 249 SLLMDDVE--DGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDSSASNL 306
Query: 146 LMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
L + +G E + + K KTG L A + +MA +
Sbjct: 307 WKLINEELLRLHRGQGMDLYWRDSLTCPTEEEYIQMVKNKTGGLFRIAIKL--MMAMSPL 364
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + +GIIFQ+ DDLL+ D
Sbjct: 365 QQIPDYVPLVDLIGIIFQIRDDLLNLSSD 393
>gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
Sheeba]
gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
Sheeba]
Length = 307
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 17/222 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
+ + + +++ D L S + K +RS L+ +
Sbjct: 7 QAIQNKIASWIKEIESGFIDELFS----HIGPSKMLRSKLMLALLDTKIDAIILDKAFNL 62
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+ +D +RR P+++ + A++ G+ + AF +S +
Sbjct: 63 CAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMEN- 121
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L + + D+ + + I + KT M + +S A
Sbjct: 122 ------LIAQILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFMEASLKSMA 175
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I+ + FG N G+ FQ+ DDLLD ++ L K
Sbjct: 176 ILLNKDAKIYA---NFGLNFGMAFQIIDDLLDITQNATTLGK 214
>gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
lyrata]
gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
lyrata]
Length = 189
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
+I KT AL+ A G IM ++ E E+LR + + ++FQ+ DD+LD EDL
Sbjct: 51 ELIHLHKTAALLEEAAILGVIMGDGTEEEIEKLRKYARCIRLLFQVVDDILDVTESTEDL 110
Query: 235 PK 236
K
Sbjct: 111 GK 112
>gi|217968536|ref|YP_002353770.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217505863|gb|ACK52874.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 258
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 15/215 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
P+ LQ + +R+D I+ + + + + + L G ++ R LV A
Sbjct: 9 PAWLQHDMERVDAIIRAHMNNDVA--------LIRQVVEFILHGAERRRPALVLASARAL 60
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ AA+E IH +HDD+ G + + I+ G+ L T
Sbjct: 61 GHGGERPHALAAAVELIHISLALHDDVTEASGGAADGEREGA--LFGNAGNILLGDLLYT 118
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
AF +I ++ +LS N+ +G + + L I + +
Sbjct: 119 SAFRMIVD-----LGDMEVMRVLSDATNVIAEGEVAYRELLAAPASRTPEAWLDIARRRR 173
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
L E AI+ A + L FG ++G
Sbjct: 174 AKLFEAGAECMAIVHGADPAARSALARFGLHVGSA 208
>gi|308197521|gb|ADO17798.1| chrysanthemyl diphosphate synthase [Tanacetum cinerariifolium]
Length = 395
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 13/245 (5%)
Query: 1 MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
+ L S L + + +T+ +L+ ++ + I Y + GK +R + V
Sbjct: 50 LTTTLSSNLDSQFMQVYETLKSELIHDSSFEFDDDSRQWVERMIDYTVPRGKMVRGYSVV 109
Query: 60 ECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ L +G E + + LIHDD+ + + +
Sbjct: 110 DSYQLLKGEKLTEDGAFLVCALGWCTEWLQAFLLIHDDIMDGSHTRRGQPCW-FRLPGVG 168
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----LDIQ 168
V AI G L + I+ + + + T + G + +
Sbjct: 169 VVAINDGVLLRNHVHRILKKHFKGKAYYVHLLDLFNETEFQTISGQMIDTIARLAGQKDL 228
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
++ + Q + +M + + +++ LG+ +Q+ +D L
Sbjct: 229 SKYSMSLNSRIAQYKSSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQIQNDYL 288
Query: 229 DCEED 233
D D
Sbjct: 289 DTFGD 293
>gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
Length = 313
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 84/215 (39%), Gaps = 18/215 (8%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECASLFNVN 68
I+ ++ L + + + + + + L L +
Sbjct: 53 AAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACELVGGD 105
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ AAI +H + +H+ LP D KP + +Y ++ G+G++ + F
Sbjct: 106 RSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDGIVPFGF 164
Query: 129 EIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKM 183
E+++ P + ++++ ++ G +GM+ G + + + + + K
Sbjct: 165 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKK 224
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
K G + GAI+ A++ E ++LR FG G
Sbjct: 225 KYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 259
>gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 364
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 77/255 (30%), Gaps = 26/255 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSF 56
M S L++ RI +++ D L S + D + + GGK++RS
Sbjct: 1 MTSS--SDLEQIESRIVSLVKDFAFLHADDSVASSCRPIADMVAKQAVTSSEGGKRLRSL 58
Query: 57 LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPT---V 107
L + F + A+E +L+HDD+ + +
Sbjct: 59 LTLDSFRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDIIDDSDLRRGKPSAHRAFS 118
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ E G L + + + + + GQ+LD+
Sbjct: 119 TGTHSEAIGHGLGIMLGDMLATASVDIADKAASKLTHGSDVVAALLNMHREVEVGQVLDL 178
Query: 168 QDEFIDETQVFMIQ--------KMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENL 217
E + E G + A K+ L G L
Sbjct: 179 AVELNPLDDPDELVEASLNVFRWKTASYTTIAPLEFGMLAAGIGKDDARKQAL-AVGLPL 237
Query: 218 GIIFQLADDLLDCEE 232
G+ FQLADDLLD
Sbjct: 238 GLAFQLADDLLDVVG 252
>gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis]
Length = 477
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ +KT AL+ +C + A+++ E FG+NLGI FQL DD+LD
Sbjct: 315 MAFDYYLHKTYLKTAALISKSCRAAAVLSGVRDPIIEECYEFGKNLGICFQLVDDMLDFT 374
Query: 232 ---EDLPK 236
+DL K
Sbjct: 375 ISAKDLGK 382
>gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
Length = 286
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ +D +D LLL ++ R+ A RY GG ++R+ L + A+ N++
Sbjct: 15 LRDVDAQIDRLLL--------PNSSRVADAARYHFSAGGARVRARLGLDAAAALNLSPQA 66
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+L A E +H SL+HDDL D +RRGKP+V ++ + AI G+ L++ A+ I
Sbjct: 67 SLACAIAPELLHNASLVHDDLQ--DGDAMRRGKPSVWSRFGKDIAISTGDLLISAAYMAI 124
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + + + + GQ D + I K+G L+
Sbjct: 125 A--------AHPYPALALRAMHDAVLYTIDGQTQDCRSTQPTPEAYVNIAANKSGPLLAL 176
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I A A E + G L + +Q DD++D +DL K
Sbjct: 177 PIRLALIAAQAPGQ--ETVVHAGRALAVAYQTLDDIMDRADDLAK 219
>gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
Length = 352
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 65/212 (30%), Gaps = 16/212 (7%)
Query: 40 LSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALRVGAAIECIHCYSLIHDDL 92
++ + GGK+ R V A L + + AL +G +E + + L+ DD+
Sbjct: 46 KKSLECNVPGGKRNRGLSVIATARLLVAPQELSDEDIKGALILGWCVEFLQAFFLVADDI 105
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+ AI + + ++++ ++ T
Sbjct: 106 MDDSVTRRGQPCW-FRNPEIGTIAINDSFMIESCIYKLLKKYFRSQPYYADLLDLMHETT 164
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-----HASQNEK 207
G + + + + ++ +A + S+ +
Sbjct: 165 YDTEVGQTLDLITAPSYVDFSRFSIERYRAIVKYKTAIYSFYLPVALAMTMTKNNSEVDY 224
Query: 208 ERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ R +G FQ+ DD LDC D K
Sbjct: 225 QDARQVLMQMGEYFQIQDDFLDCFGDPKITGK 256
>gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
Length = 364
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 78/264 (29%), Gaps = 28/264 (10%)
Query: 1 MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSF 56
M G L ++ + + L L M D ++ +I + GGK++R+
Sbjct: 1 MTGAEQLRNEQADFVASVAGELTGFLTSRQGIMSGISPDIDPIMGSISNLVTGGKRLRAL 60
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
+ + A V A + +D RRG P+VH ++ ++
Sbjct: 61 MCYWGWRGAGGDAGAAEVVTAGAALELFQAAALIHDDIIDRSDTRRGGPSVHRRFSQLHE 120
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A + I + L + + + G + L ++ +
Sbjct: 121 AQGWALDSGRFGQAAAILAGDLCLSFSEEAFTDIGERAASGSRARLIFNLMRAEVMAGQY 180
Query: 175 TQVF-------------------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ +I+ G +A A+ + F
Sbjct: 181 LDILEEVAGPVRDRAGAVSRAQSIIRFKSAKYSTEHPLALGGALAGATNDLLRGYSAFAL 240
Query: 216 NLGIIFQLADDLLDCEED---LPK 236
LG FQL DD+L D K
Sbjct: 241 PLGEAFQLRDDVLGVFGDPLTTGK 264
>gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
Length = 307
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ + I + + + S ++ + K +RS L+
Sbjct: 3 EKQLQAIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D IRR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATIRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + L + + D+ + + I + KT +
Sbjct: 115 ELSKMGESIAQ-------ILSNAVLRLSRGEIEDVFVGESFNSDKQKYWRILEDKTAHFI 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAKTLGK 214
>gi|146284189|ref|YP_001174342.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
A1501]
gi|145572394|gb|ABP81500.1| Geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
A1501]
Length = 296
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
L +++D L L S + D + A+R L GK++R L+ +
Sbjct: 16 LLRLRRQVDERLALRLPFPESEL-----DTVTQALREGTLAPGKRLRPLLLLLALGDLDA 70
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L A+E IH SL DD+P MDN +RRG+PT+H+++ E A++A LL++A
Sbjct: 71 DPAIGLDPACALEMIHAASLFLDDMPCMDNASLRRGQPTIHLRFGEDVAVLASVALLSHA 130
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKT 185
+ I + + + L +G QG++ GQ D+ + +I +KT
Sbjct: 131 YGITAMAPSLSPRQRN-DAVALLARAVGAQGLVRGQFRDLHGTGQSQQLDAVIATNQLKT 189
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
G+L A E A++ A + LR F LG+ FQL DD+ D
Sbjct: 190 GSLFTAALELAALLVGADRALTAHLRGFASELGMAFQLLDDIAD 233
>gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
Length = 308
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 7 SKLQENSKR-IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
LQ+ K +D + L + ++ +RL I GGK+IR LV + +
Sbjct: 9 EWLQDEVKPTVDDRIQQWLEEF------EYAERLWYPID---TGGKRIRPGLVFLISEMV 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+V AL + A +E +H ++L+HDD+ +D RR +PT+ +Y E +AI G+
Sbjct: 60 DVPREDALDIAAGVELLHNFTLVHDDI--IDGDEYRRDEPTLWAKYGEGSAINLGD---- 113
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + R + ++ + M + I + + + KT
Sbjct: 114 ---MMFAKAILCFPPETRDLALDTVITVTNGEQMDIDF---AERRDITVEEYMTMVRRKT 167
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
GAL+ ++ +A + L F +LG FQ+ DDLLD + K
Sbjct: 168 GALLELCVDAPLALAETDLD----LSGF-TSLGPAFQIRDDLLDFQ--EGK 211
>gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 742
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 70/194 (36%), Gaps = 11/194 (5%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
GGK RS ++ C + + + R A E +H SLI DD+ DN +RRG+ V
Sbjct: 445 RGGKSWRSLVLVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQ--DNSMVRRGEKCV 502
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H++Y TAI AG+ A + R + G G
Sbjct: 503 HVEYGVATAINAGSACYFMAPRAARIQDLPPEKASRIYQLYFDVLLAGHAGQGLDIYGLD 562
Query: 168 QDEFIDETQVFM---------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ I KTG + C ++ A E + FG LG
Sbjct: 563 YLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAMACVLCEAPAALSEAVEKFGLTLG 622
Query: 219 IIFQLADDLLDCEE 232
+ FQ+ DD L+
Sbjct: 623 LAFQIVDDALNIRG 636
>gi|327482515|gb|AEA85825.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri DSM
4166]
Length = 307
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
L +++D L L S + D + A+R L GK++R L+ +
Sbjct: 27 LLRLRRQVDERLALRLPFPESEL-----DTVTQALREGTLAPGKRLRPLLLLLALGDLDA 81
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ L A+E IH SL DD+P MDN +RRG+PT+H+++ E A++A LL++A
Sbjct: 82 DPAIGLDPACALEMIHAASLFLDDMPCMDNASLRRGQPTIHLRFGEDVAVLASVALLSHA 141
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKT 185
+ I + + + L +G QG++ GQ D+ + +I +KT
Sbjct: 142 YGITAMAPSLSPRQRN-DAVALLARAVGAQGLVRGQFRDLHGTGQAQQLDAVIATNQLKT 200
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
G+L A E A++ A + LR F LG+ FQL DD+ D
Sbjct: 201 GSLFTAALELAALLVGADRALTAHLRGFASELGMAFQLLDDIAD 244
>gi|309754779|gb|ADO87007.1| E,E-farnesyl diphosphate synthase [Santalum album]
Length = 342
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 15/224 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+LL A + + + Y + GGK R V + L + A
Sbjct: 18 ELLRDPAFNFTDASRQWVDRMLDYNVPGGKLNRGLSVIDSYELLKEGKELTDDEIFLASA 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
+G IE + Y L+ DD+ MD + RRG+P + A+ G L + I+
Sbjct: 78 LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPEVGLIAVNDGIMLRNHIPRILKK 135
Query: 134 PKTQLKDNIRS-----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ T + + + ++ ++Q
Sbjct: 136 HFKNKPYYVELLDLFNEVEFQTTSGQMIDLITTLEGQKDLSKYSMPIHHRIVQYKTAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+M+ + + + +G FQ+ DD LDC
Sbjct: 196 FYLPVACALLMSGENLDSHTEVEKILVEMGTYFQVQDDYLDCFG 239
>gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J1-175]
Length = 157
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERN------IEPRLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKT 136
LLT AF I++ +
Sbjct: 117 LLTLAFSILAEDEN 130
>gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 287
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ + RI+ L + L Q RL +A+R A+ G ++R L A+ ++
Sbjct: 2 DVTNRIERALTEALSQAD---LAGCPPRLAAAMRSAVFPRGARVRPRLCHSVAAACGDDN 58
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
GAA+E +HC SL+HDDLP D IRRG+P+VH + E A++ G+ L+
Sbjct: 59 PATEAAGAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALI----- 113
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+++ + +L+ G+ G + E E + + KTGAL
Sbjct: 114 VLAFQTIARVNCAPDRLLKLTQVIGSAVGVPLGIVAGQAWECESEINLAHYHRSKTGALF 173
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A +GA A A R GE +G +Q+
Sbjct: 174 VAATAAGAASAGADPE---PWRMVGEKIGEAYQV 204
>gi|149923736|ref|ZP_01912130.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
SIR-1]
gi|149815420|gb|EDM74960.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
SIR-1]
Length = 262
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ C + V+ V AA+E +HC SL+HDDLP D+ +RRG+P+VH + E A
Sbjct: 1 MAMACKADARVSLDAQADVAAAMELMHCASLVHDDLPCFDDAPLRRGRPSVHAAFGEELA 60
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++AG+GL+ A+E+I+ + +S G + G + +
Sbjct: 61 VLAGDGLIILAYEVIAETNLPPSAVPKLIRCISRGVGAGGGLVAGQAWESERSVGLQT-- 118
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ KTGAL +GAI+A A Q FG +LG +Q+ADDL D D
Sbjct: 119 ---YHQAKTGALFEAGARAGAILAGAPQE---PWAKFGAHLGEAYQVADDLRDALGDARE 172
Query: 234 LPK 236
L K
Sbjct: 173 LGK 175
>gi|15289750|dbj|BAB16687.2| putative FPP synthase 1 [Eucommia ulmoides]
Length = 348
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 80/249 (32%), Gaps = 22/249 (8%)
Query: 7 SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC---- 61
++L++ + ++L +LL A + + + + Y + GGK R V +
Sbjct: 2 AELKKEFLNVYSVLKKELLHDPAFSLTEDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLL 61
Query: 62 ---------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
A L + +G IE + +L+ DD+ MD+ + RRG+ +
Sbjct: 62 KELSSSKKGAQLTESEIFHSSVLGWCIEWLQACALVLDDI--MDSSHTRRGQMCWYKLPK 119
Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
AI G L + I+ + + + G + + + E
Sbjct: 120 VGMIAINDGLILRNHVPRILKKHFRSKPYYLELLDLFHEVECQTVGGQMIDLITTLVGEI 179
Query: 172 IDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + +M ++ +G FQ+ DD
Sbjct: 180 DLSEYSLPTHRQITVSKTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDD 239
Query: 227 LLDCEEDLP 235
LDC D
Sbjct: 240 YLDCFGDPE 248
>gi|90109287|pdb|2F7M|F Chain F, Crystal Structure Of Unliganded Human Fpps
gi|90109296|pdb|2F89|F Chain F, Crystal Structure Of Human Fpps In Complex With
Pamidronate
gi|90109297|pdb|2F8C|F Chain F, Crystal Structure Of Fpps In Complex With Zoledronate
gi|90109305|pdb|2F8Z|F Chain F, Crystal Structure Of Human Fpps In Complex With
Zoledronate And Isopentenyl Diphosphate
gi|90109306|pdb|2F92|F Chain F, Crystal Structure Of Human Fpps In Complex With
Alendronate
gi|90109307|pdb|2F94|F Chain F, Crystal Structure Of Human Fpps In Complex With
Ibandronate
gi|90109321|pdb|2F9K|F Chain F, Crystal Structure Of Human Fpps In Complex With
Zoledronate And Zn2+
gi|303325057|pdb|3N1V|F Chain F, Human Fpps Complex With Fbs_01
gi|303325058|pdb|3N1W|F Chain F, Human Fpps Complex With Fbs_02
gi|303325075|pdb|3N3L|F Chain F, Human Fpps Complex With Fbs_03
gi|303325076|pdb|3N49|F Chain F, Human Fpps Complex With Nov_292
gi|303325079|pdb|3N5H|F Chain F, Human Fpps Complex With Nov_304
gi|303325080|pdb|3N5J|F Chain F, Human Fpps Complex With Nov_311
gi|303325081|pdb|3N6K|F Chain F, Human Fpps Complex With Nov_823
gi|307448381|pdb|3N45|F Chain F, Human Fpps Complex With Fbs_04 And Zoledronic AcidMG2+
gi|307448382|pdb|3N46|F Chain F, Human Fpps Complex With Nov_980 And Zoledronic AcidMG2+
Length = 350
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 15/214 (7%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DL 92
RL + Y +GGK R V +L+ +
Sbjct: 41 RLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVAD 100
Query: 93 PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQL 146
MD+ RRG+ + + AI N L + ++ + + Q
Sbjct: 101 DIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQS 160
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QN 205
L + Q F ++ +++ + MA +
Sbjct: 161 SYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEK 220
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E + +G FQ+ DD LD D K
Sbjct: 221 EHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK 254
>gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans]
gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans]
Length = 470
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+KT +L+ +C + AI++ A + + FG+NLGI FQL DD+LD
Sbjct: 310 FDYYLHKTYLKTASLISKSCRAAAILSGAQETVVDECYNFGKNLGICFQLVDDMLDFT 367
>gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium adolescentis ATCC 15703]
gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
L2-32]
gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium adolescentis ATCC 15703]
gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
L2-32]
Length = 362
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 64/205 (31%), Gaps = 18/205 (8%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGY 99
+ GGK++R+ L + F + + AIE +L+HDD+ +
Sbjct: 48 SSEGGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDIIDDSDLR 107
Query: 100 IRRGKPT---VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + + G L + + S +
Sbjct: 108 RGKPSAHRALATDTHSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMH 167
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQ--------KMKTGALMCFACESGAIMAHASQNEKE 208
+ + GQ+LD+ E + E G + A + +
Sbjct: 168 REVEIGQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAPADAR 227
Query: 209 RLR-CFGENLGIIFQLADDLLDCEE 232
RL G LG+ FQLADDLLD
Sbjct: 228 RLALAIGLPLGLAFQLADDLLDVIG 252
>gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
Length = 325
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
D I + KT +L+ + S AI + S + E++ +G NLG+ FQ+ DD+
Sbjct: 160 FDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTSICEQMYEYGRNLGLSFQVVDDI 219
Query: 228 LDCE-----------EDLPK 236
LD DL K
Sbjct: 220 LDFTQSAEQLGKPAGSDLAK 239
>gi|123491638|ref|XP_001325885.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
gi|121908791|gb|EAY13662.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
Length = 334
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 63/225 (28%), Gaps = 9/225 (4%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHLTAL 73
+ + L + + Y+ GGK +R + L + +
Sbjct: 13 EVKECISQFLN---GFTVDWVQKHCIDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEE 69
Query: 74 R---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
++ MD RRG+ + + + + +L +
Sbjct: 70 AKVGYYLGWVEEIIHAGYLIADDLMDQSETRRGQECWYKREEIGDQAVNDGLILQDLAYV 129
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + ++ + IG +G I + ++ +
Sbjct: 130 LLDKIRNKLNTKYYAKLIEFSRKIGTYTTIGQTYDFIAKIPSFQEYNQIVTYKTAFYTVV 189
Query: 191 FACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED 233
G I + ++ E + F LG FQ+ DD +D D
Sbjct: 190 SPIVFGLIGSQIYDVDDKFEDIEKFMIRLGNYFQVQDDYIDVYGD 234
>gi|115738308|ref|XP_781908.2| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase
(Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
gi|115948816|ref|XP_001196369.1| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase
(Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
Length = 619
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 68/238 (28%), Gaps = 12/238 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS------ 63
Q K ++D+L A+ + Y + GGK+ R V
Sbjct: 282 QTFEKVFHELVDELTDDAANPEVIDAAAWFKEMLVYTVPGGKRNRGLTVVNAFRQLANSV 341
Query: 64 -LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE---VTAIIA 119
N TA+ +G +E + Y LI DD+ + +
Sbjct: 342 QNTEDNIHTAMVLGWCVEWLQAYFLIADDMMDQSKTRRGQPCWYKKDGVGNVAINDSFYV 401
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ I ++ T +L D E +
Sbjct: 402 EACIYKLLKRYIGHQPYYVQVMELFHETTYQTIMGQSLDLLTSPENDRDLNRFTEQRYAA 461
Query: 180 IQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I K KT + E+ A+ + + + +G FQ+ DD LDC +
Sbjct: 462 IVKWKTAFYSFYLPEALAMHMVGISDAKSHTNAKTILLQMGHFFQVQDDYLDCYGEPE 519
>gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
Length = 306
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 28/239 (11%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
L E +++ L+D L + ++ ++YA+L GGK++R L +
Sbjct: 4 LAEFQSEWIPKLNQQLEDDLTR------ATNDSEFSDMMKYAVLNGGKRLRPMLSLAAMA 57
Query: 64 LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
F + + A+E +H YSL+HDDLP+MDN +RRGKP+VH Q+ E AI+ G+
Sbjct: 58 CFGQKITPSFLKAATAVEWVHSYSLVHDDLPAMDNDLVRRGKPSVHAQFGEAEAILVGDA 117
Query: 123 LLTYAFEIISSPKTQLKDNIRS------QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
LLT AF ++++ + ++ +L L+ G GM+ GQ+ D+ +
Sbjct: 118 LLTGAFHVLATANDSVVEDEMISAVELLKLSQILSVQSGSLGMVIGQVHDMYNHGKQSKI 177
Query: 177 VFM-----IQKMKTGALMCFACESGAIMAHASQ---------NEKERLRCFGENLGIIF 221
+ KTGAL+ F+ +G +++ + + FG + GI F
Sbjct: 178 DETWLIDEVYMPKTGALLGFSALAGTRLSNQQDIDQIGQDRFDTNLAMLTFGYDFGIAF 236
>gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
Length = 468
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
Q +KT AL+ + + AI++ + ++ FG+++GI FQL D
Sbjct: 300 HDQMIETAFDYYLHKTYLKTAALISKSSRAAAILSGVDRTVVDQCYEFGKDIGICFQLVD 359
Query: 226 DLLDCE---EDLPK 236
D+LD +DL K
Sbjct: 360 DMLDFTVSAKDLGK 373
>gi|18478919|gb|AAL73357.1|AF386102_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi]
Length = 425
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 30/257 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+ L + L D L + L + LGGK R V
Sbjct: 65 ASMERFLSVY-DEVQAFLLDQLQS-KYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 122
Query: 59 ---TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDE 113
L + + H + MD +RRGKP +
Sbjct: 123 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 182
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIG 155
T +G++ ++ I + + + S+ +
Sbjct: 183 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNK 242
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFG 214
L + M EF +++ T G +++ A+ + + L
Sbjct: 243 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLVSEAAASVEMNLVERVA 302
Query: 215 ENLGIIFQLADDLLDCE 231
+G FQ+ DD++DC
Sbjct: 303 HLIGEYFQVQDDVMDCF 319
>gi|4324960|gb|AAD17204.1| farnesyl diphosphate synthase [Artemisia annua]
Length = 343
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 67/243 (27%), Gaps = 14/243 (5%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L S + K DT+ +L+ A + + Y + GGK R V
Sbjct: 1 MSSIDLKS---KFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVV 57
Query: 60 ECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ L + L + MD + RRG+P
Sbjct: 58 DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGM 117
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A G L + I+ + + + G + + + E
Sbjct: 118 IAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLS 177
Query: 175 TQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I + +M ++ ++ +G FQ+ DD LD
Sbjct: 178 KYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLD 237
Query: 230 CEE 232
C
Sbjct: 238 CFG 240
>gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi]
Length = 222
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KTGA+ C I+ AS+ + + + FG+ +G+ +Q+ DD+L +
Sbjct: 62 KFIHTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVLGVKG 116
>gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 340
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 19/229 (8%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L + + + + +A + GK +R+ + A L ++ AL
Sbjct: 27 QRLHEFI---VNRLPKDGTPLADAARHHFAKPGKMLRAKMALSAAKLLKIDQAAALHWST 83
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+IE +H SLIHDD+ D +RRG+ V +Y A+ G+ L+ +FE+ + +
Sbjct: 84 SIEVLHNASLIHDDIC--DGDKMRRGRVAVWAKYGRDVALTLGDWLIALSFELAAEAAQR 141
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ +++ + I KT L+ E A
Sbjct: 142 ANTPMLVKILAKHMATTTAGEAAEFSIQSSYSWDH----YLRIAGDKTAPLLTAPLEGIA 197
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL---------DCEEDLPKK 237
MA + + + +LG +Q+A+D+L DC DL ++
Sbjct: 198 AMA-LHGDAAGAIGSYFRHLGEAYQIANDILNFRAGDGAADCGSDLARR 245
>gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
humanus corporis]
gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
humanus corporis]
Length = 262
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+S +D RRGKP+V++ ++ +AG+ +L A +I+ +
Sbjct: 18 MIHSASLIHDDVIDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMMIARLRDDKVTLT 77
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ++ L +Q + E KT +L+ + ++ A++A A
Sbjct: 78 LSQVVTDLVQGEFMQL------GSKETENERFAHYLTKTYRKTASLIANSAKAVAMLAGA 131
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ E +G N+G+ FQL DDLLD
Sbjct: 132 DESLSEVAFQYGRNIGLAFQLVDDLLDFVS 161
>gi|321475353|gb|EFX86316.1| hypothetical protein DAPPUDRAFT_313317 [Daphnia pulex]
Length = 347
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 13/210 (6%)
Query: 39 LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV--GAAIECIHCYSLIHDDLPSMD 96
+ + Y L GGK R V E +F + ++ + A+ +
Sbjct: 38 IEKIVEYNLKGGKMNRGLAVVESFMIFKNDQISEQDIETAIALGWAVEMLQAFFLVADDI 97
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + A N + I + KD +L L H++ +
Sbjct: 98 MDDSLTRRMKPCWYRTNNLGVKAFNDSILLESLIYQILLSYCKDRHYYLPILELFHDVTM 157
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTG----------ALMCFACESGAIMAH-ASQN 205
+ LG M +++ M+T ++ +
Sbjct: 158 RTSLGQAMDLHSTPDPNQSPDLSKFTMETYDAIVKYKTAYYSFYLPVAIAMRVSGIQDER 217
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ +G FQ+ DD LDC D
Sbjct: 218 LFKQAEDILLPMGRFFQVQDDYLDCFGDPE 247
>gi|320583113|gb|EFW97329.1| Farnesyl pyrophosphate synthase [Pichia angusta DL-1]
Length = 351
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 57/212 (26%), Gaps = 18/212 (8%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSM 95
+ Y GGK R V + +L + + M
Sbjct: 42 LNYNTPGGKLNRGLSVVDTYALLKGYKSFDDFEPEEYKKTAILGWAVELLQAYFLVADDM 101
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ I R + D V I + + A + K KD+ L+
Sbjct: 102 MDKSITRRGQPCWYRVDGVNEIAINDSFMLEAAIYVLLKKYFRKDSYYVDLLELFHEVTF 161
Query: 156 LQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEK 207
+ + +F F++ MA + +
Sbjct: 162 QTELGQLLDLLTAPEDHVDLSKFSLSKHSFIVTFKTAYYSFYLPVALAMYMAGVSDEKDL 221
Query: 208 ERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++ + LG FQ+ DD LDC D+ K
Sbjct: 222 KQAQDVLIPLGEYFQIQDDYLDCFGKPEDIGK 253
>gi|182405|gb|AAA35820.1| farnesyl pyrophosphate synthetase [Homo sapiens]
Length = 346
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 15/214 (7%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DL 92
RL + Y +GGK R V +L+ +
Sbjct: 37 RLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVAD 96
Query: 93 PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQL 146
MD+ RRG+ + + AI N L + ++ + + Q
Sbjct: 97 DIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQS 156
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QN 205
L + Q F ++ +++ + MA +
Sbjct: 157 SYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEK 216
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E + +G FQ+ DD LD D K
Sbjct: 217 EHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGK 250
>gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
Length = 344
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 7/224 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
L+ + +Q +A +Y + G +R+ L F + A+
Sbjct: 33 RALEQVRALMLDALQGVMEGPANNASQYQISTRGSLLRARLALASCRSFECSQEYAVVAA 92
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A E IH SL+HDDL +D +RRG+ TV ++ A+ AG+ L +S+
Sbjct: 93 ACCELIHNASLVHDDL--LDGDQLRRGQATVWKRHGRGVALCAGDLL-LCTAFAVSAGLD 149
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + L+ + G + KT L+ +G
Sbjct: 150 DAQQSRLLTQYLAAMTGRVIVGQSIEIAPVEPGVQPRFRAYIEAAQAKTVPLIQLPLMTG 209
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
AI A A + + ++ F E +G+ +Q+ DDL D + DL K
Sbjct: 210 AIAAKAELSVLDSIKRFAEAVGLAYQIIDDLDDLVEPKADLKSK 253
>gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine
bacterium HF10_19P19]
Length = 338
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 12/237 (5%)
Query: 1 MNGGLPSKLQEN--SKRIDTI--LDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
M + S++ E ++++D + L +L + + + +A + GK++R
Sbjct: 1 MTENIASQVNEMQGAEKLDALPDLSAVLSAFIVRRLPSGKHPLATAAQHHFKRTGKQLRG 60
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ F V +L AA+E +H SL+HDD+ D +RRG P+V Y T
Sbjct: 61 RMALAAGDSFGVPRTASLPWAAAVEVLHNASLVHDDIC--DGDMVRRGAPSVWAFYGRDT 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A+ G+ L+ +FE+ + + ++ L ++ D
Sbjct: 119 ALALGDWLIALSFELAAEAAYLGQTPQLVSILSRHMAATTAGQALEFEVRAYPDWSGYMD 178
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
I KT L + E A +A ++ L F G +Q+A+D+L+
Sbjct: 179 ----ISTGKTAPLFIASVEGIAHLAGR-RDAIRPLNRFFSAAGGCYQIANDMLNVIG 230
>gi|14573639|gb|AAK68152.1| farnesyldiphosphate synthase [x Citrofortunella microcarpa]
Length = 341
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 10/222 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAA 78
+LL A + + Y + GGK R V + L + +A
Sbjct: 17 QELLYDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKTTDDEFFLSSA 76
Query: 79 IECIHCYSLIHDDL--PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPK 135
+ + + + MD + RRG+P A G L + I+ +
Sbjct: 77 LGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHF 136
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMC 190
+ + + G + + I+ E + +
Sbjct: 137 RDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFY 196
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA + ++ ++ +GI FQ+ DD LDC
Sbjct: 197 LPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFG 238
>gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 332
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALR 74
I+ L + S M + D + + Y GK +R+ L + L
Sbjct: 12 IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ AAIE H +LIHDD+ +D +RR +H Y AI AG+ LL+YA +++
Sbjct: 72 LAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGR-LATR 128
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QKMKTGALMCF 191
QL + + ++ +L G++ + ++ + + K KT L
Sbjct: 129 GAQLLNIKDNWEDNGPLPYHIVERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAFLFGL 188
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
AC+ G Q + G LG+ FQL+DDL+D
Sbjct: 189 ACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDY 227
>gi|224284882|gb|ACN40171.1| unknown [Picea sitchensis]
Length = 347
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 78/245 (31%), Gaps = 18/245 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ +K +E + +L A + + Y + GGK R V +
Sbjct: 8 DVKTKFEEIYLELKA---QILNDPAFDYTEDARQWVEKMLDYTVPGGKLNRGMSVIDSYR 64
Query: 64 L-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-T 115
L +G IE + Y LI DD+ MD+ + RRG+P
Sbjct: 65 LLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDSSHTRRGQPCWFRLPKVGLI 122
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DE 170
A+ G L + I+ + + + G L + + +
Sbjct: 123 AVNDGILLRNHICRILKKHFRTKPYYVDLLDLFNEVEFQTASGQLLDLITTHEGATDLSK 182
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ T V ++Q +MA + ++ +G FQ+ DD LDC
Sbjct: 183 YKMPTYVRIVQYKTAYYSFYLPVACALVMAGEILDNHVDVKNILVEMGTYFQVQDDYLDC 242
Query: 231 EEDLP 235
D
Sbjct: 243 FGDPE 247
>gi|153791944|ref|NP_001093302.1| farnesyl diphosphate synthase 3 [Bombyx mori]
gi|146424710|dbj|BAF62115.1| farnesyl diphosphate synthase 3 [Bombyx mori]
Length = 385
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 15/234 (6%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRV 75
I+D+L + + + Y + GGKKIR LF +R+
Sbjct: 57 IIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRL 116
Query: 76 GAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
+ + MD RRG P + D AI + +EI+
Sbjct: 117 ARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILK 176
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGA 187
+ K+ + + G + +++ E +++ +
Sbjct: 177 IYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYY 236
Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ G I+ + E + +G +FQ+ DD +DC + KK
Sbjct: 237 SIKLPVVLGLILTQNRQNAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKK 290
>gi|281338720|gb|EFB14304.1| hypothetical protein PANDA_018257 [Ailuropoda melanoleuca]
Length = 420
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 69/257 (26%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG Q+ + I+ L H + RL + Y +GGK R
Sbjct: 68 MNGDQKLDPYDQAKQDFIQHFSQIVKVLTEDGVGHPEMGDAIARLKEVLEYNAVGGKYHR 127
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +LR + MD+ RRG+ +
Sbjct: 128 GLTVLIAFQELVEPRKQDADSLRRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQLCWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 188 KPGIGLDAINDALLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 248 GSVDVGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 307
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 308 IQDDYLDLFGDPSVTGK 324
>gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays]
gi|194690074|gb|ACF79121.1| unknown [Zea mays]
gi|238009334|gb|ACR35702.1| unknown [Zea mays]
Length = 245
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D+ +RRGK T+H Y A++AG+ + + +++ + +
Sbjct: 1 MIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKL 60
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ++ Q + D I + KT +L+ + +S +I +
Sbjct: 61 ISQVIKDFASGEIKQA------STLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGV 114
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE-----------EDLPK 236
S E++ +G NLG+ FQ+ DD+LD DL K
Sbjct: 115 STTICEKMYAYGRNLGLSFQVVDDILDFTQSAEQLGKPAASDLAK 159
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL--KDNI 142
SLIHDD+P MD+ +RRG+P+ H+ + E TA++AG+ L AFE ++ +
Sbjct: 1 MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ + L G G+ GQ+ D + E + + I KT L+ A SGAI+
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E ER+R + +G++FQ+ DD+LD
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSE 155
>gi|115437522|ref|XP_001217832.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624]
gi|114188647|gb|EAU30347.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624]
Length = 347
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 65/242 (26%), Gaps = 16/242 (6%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TE 60
+ + + + +L H + L A+ + GGK R V
Sbjct: 4 KTDRAAFEAVFTELAQDILDHAKKYNLPDNAMQWLEKALNVNVPGGKLNRGLSVPDTGLA 63
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ + MD+ RRG+P + Q I
Sbjct: 64 LLKKPLTDEQFKHLSMLGWLTELLQAFFLVSDDIMDSSITRRGQPCWYRQPGVGLIAIND 123
Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+L +I ++ +L T L + + +D +
Sbjct: 124 AFMLESGIYLILKKYFRSHPAYVDLIELFHETTWQTELGQLCDLITAPEDNVNLDNFSME 183
Query: 179 MIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ T ++ +A A+ ++ LG FQ+ DD LD D
Sbjct: 184 KYMFIVTYKTAYYSFYLPVALALHYLQLATPQNLQQAHDILIPLGQYFQVQDDYLDAYGD 243
Query: 234 LP 235
Sbjct: 244 PA 245
>gi|322794010|gb|EFZ17248.1| hypothetical protein SINV_11878 [Solenopsis invicta]
Length = 354
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 60/216 (27%), Gaps = 15/216 (6%)
Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHLTALRVGAAIECIHCY 85
+ + Y + GKKIR + L N A + +E + Y
Sbjct: 39 PDVAKWMEKVLEYNVPNGKKIRGLTLICVYKSLVPNDQLTEDNIRLAQILAWCVEMMQAY 98
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
L+ DD+ + + E A+ G L + + I+ +
Sbjct: 99 LLVLDDIQDQSLFRRGQPCWHRYNNIGEA-AVNDGVLLESAMYYILRKHFQGKESYCNLV 157
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESGAIM 199
L G D+ + M I+ + +
Sbjct: 158 ETFQDAIFKTLMGQCLDLNSTNFDKKPNLNLFTMDRLNSVIKFKTAHYTYVLPIIAAMHL 217
Query: 200 AH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + + +G +FQ+ DD LDC D
Sbjct: 218 AGIKDSEMFNQAQAILLEIGRLFQVQDDYLDCFGDS 253
>gi|71409298|ref|XP_807002.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
Brener]
gi|70870903|gb|EAN85151.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 425
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 30/257 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+ L + L D L + L + LGGK R V
Sbjct: 65 ASMERFLSVY-DEVQAFLLDQLQS-KYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 122
Query: 59 ---TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDE 113
L + + H + MD +RRGKP +
Sbjct: 123 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 182
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIG 155
T +G++ ++ I + + + S+ +
Sbjct: 183 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNK 242
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFG 214
L + M EF +++ T G +++ A+ + + L
Sbjct: 243 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLVSEAAASVEMNLVERVA 302
Query: 215 ENLGIIFQLADDLLDCE 231
+G FQ+ DD++DC
Sbjct: 303 HLIGEYFQVQDDVMDCF 319
>gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 360
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 65 FDILAGDVTPDWRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHHALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 332
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 5/218 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALR 74
I+ L + S M + D + + Y GK +R+ L + L
Sbjct: 12 IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133
+ AAIE H +LIHDD+ +D +RR +H Y AI AG+ LL+YA + +
Sbjct: 72 LAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLATRG 129
Query: 134 -PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+KDN L + Q+++ + + K KT L A
Sbjct: 130 AQLLNIKDNWEDNGPLPYHVVERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAFLFGLA 189
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
C+ G Q + G LG+ FQL+DDL+D
Sbjct: 190 CQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDY 227
>gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
Length = 295
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+R++ + L+ + RL + L GGK++R+ L+ + A H A
Sbjct: 1 MQRVEAQIKRLIDECD----YDEVTRLFA----TLQGGKRLRAKLILKIA----PEHKDA 48
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ A +E IH SL+HDD+ +D+ RRG+ +V+ TA++ G+ L + AF +
Sbjct: 49 PLLAAIVELIHAASLLHDDV--IDDAMTRRGEASVNATDGSKTAVMLGDILYSKAFTELV 106
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ ++ I S + + M Q+ DE + + +KT L+ A
Sbjct: 107 AFDKKVAQTIASSVTALSKGEMMDVEM-------AQNFNADEERYLDMLYLKTATLIEAA 159
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ A++A ++ +G NLG+ FQ+ DD+LD D
Sbjct: 160 AKASALLAGKDADKHAL---YGRNLGLSFQIIDDILDITADEA 199
>gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478]
Length = 385
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/241 (22%), Positives = 88/241 (36%), Gaps = 23/241 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF-- 65
+ + + L ++L+ S R+ L GK+IR+ L C L
Sbjct: 68 IADQLNLVARRLHEILVTGCSFDPIY---------RHVLATPGKRIRAGLGLACFRLQPS 118
Query: 66 --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
V+ A+ + AIE H SLIHDD+ D +RRG +V + A AG L
Sbjct: 119 AATVSPAEAIDLACAIEMFHESSLIHDDIC--DGSLLRRGARSVPAAFGVRIAARAGFHL 176
Query: 124 LTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
A +I++ + + + G + + D +
Sbjct: 177 AGTALQILARVVADNPAVFARVGEDPAITYLDQLSELSFGQLIETLPPAIDDSVLRRHYE 236
Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
++ KTG L AC G + L + + L + FQ+ DD+ D E L K
Sbjct: 237 RVAGAKTGTLFRLACSYGGTAGGVDADGLRALMRYADQLALAFQIMDDVCDVEGGPSLGK 296
Query: 237 K 237
K
Sbjct: 297 K 297
>gi|4894899|gb|AAD32648.1| farnesyl diphosphate synthase [Artemisia annua]
Length = 343
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 67/243 (27%), Gaps = 14/243 (5%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L S + K DT+ +L+ A + + Y + GGK R V
Sbjct: 1 MSSIDLKS---KFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVV 57
Query: 60 ECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ L + L + MD + RRG+P
Sbjct: 58 DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGM 117
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A G L + I+ + + + G + + + E
Sbjct: 118 IAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEGVIQTASGQMIDLIPTLVGEKDLS 177
Query: 175 TQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I + +M ++ ++ +G FQ+ DD LD
Sbjct: 178 KYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLD 237
Query: 230 CEE 232
C
Sbjct: 238 CFG 240
>gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
Length = 287
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + KT +L+ +C++ A +++ E+ +G N+GI FQ+ DDLLD +D
Sbjct: 132 DKYMQMIYKKTASLIEASCKASAFLSNYD---VEKFGTYGRNIGIAFQIIDDLLDIIQDS 188
Query: 235 P 235
Sbjct: 189 K 189
>gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
Length = 326
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
+ G + L+E ++ I L QT+ T R GK++R LV
Sbjct: 12 ITGKYATSLEECNELIQDTLKSSAPQTSDLAITLKKSR-----------GKQLRPLLVFT 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+A ++ A E IHC SL+HDD+ +D+ +RR PT++ +D A++ G
Sbjct: 61 IL----GQQTSANKLAAVCESIHCASLVHDDI--IDDCRLRRNLPTMNSIHDNSIALLLG 114
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ + T F + S + + S L Q D + + Q +
Sbjct: 115 DLMFTSIFTLSSCLPSWVTSE-------SAQTIKTLIEGELLQQTYKCDIAVTKDQYLDV 167
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ KTGAL+ F ++ + +A + ++ + + G+IFQ+ADD D
Sbjct: 168 LQKKTGALLSFCTKAASRLADKNPDDVQLAGEYANTFGLIFQIADDWADF 217
>gi|302812791|ref|XP_002988082.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
gi|300144188|gb|EFJ10874.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
Length = 363
Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 70/245 (28%), Gaps = 16/245 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSF--- 56
+ G +K + R+ +L+ + S T + + + + Y + GGK R
Sbjct: 19 VAGSFKAKFMDAYHRLKK---ELIADSESFSHTFESREWVSEVLDYNVPGGKLNRGLSVV 75
Query: 57 --LVTECA--SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG---YIRRGKPTVHI 109
LV + L A +G IE + Y LI DD+ + +
Sbjct: 76 DSLVLLRSGEELSEDELFLAFALGWCIEWLQAYFLILDDIMDDSHTRRGQPCWFRQPKVG 135
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
I+ N + + T + ++ ++
Sbjct: 136 LIAANDGILLRNHISRILKRHFHDKPYYQDLRELFDEVEYQTACGQMLDLITTPPGEVDL 195
Query: 170 EFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDL 227
I K KT M+ K E +G FQ+ DD
Sbjct: 196 SKYVMDTYLRIVKYKTAYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQIQDDY 255
Query: 228 LDCEE 232
LDC
Sbjct: 256 LDCYG 260
>gi|242791472|ref|XP_002481764.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC
10500]
gi|218718352|gb|EED17772.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC
10500]
Length = 347
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 73/231 (31%), Gaps = 16/231 (6%)
Query: 16 IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV------TECASLFNVN 68
+ ++ D+L T + + ++ ++GGK R V L +
Sbjct: 14 VHPLIKDILEATEQYNLPENARKWFSDSLNANIVGGKMNRGMSVPDTGSILLGRPLTDEE 73
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+G E + + L+ DD+ MD RRG+P + + I +L A
Sbjct: 74 KKHLSLLGWFTELLQAFFLVSDDI--MDGSITRRGQPCWYRREGVGMIAINDAFMLESAI 131
Query: 129 EIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+I ++ +L T L + ++ + +
Sbjct: 132 YVILKKYFRSHPAYTDLLELFHETTWQTELGQLCDLITAPEDHVDLNNFSMEKYTFIVKY 191
Query: 187 ALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ +A A+ ++ LG FQ+ DD LD
Sbjct: 192 KTAYYSFYLPVTLALHYLQVATPKNLKQCEDILIPLGEYFQIQDDYLDAFG 242
>gi|297242529|gb|ADI24929.1| VrtD [Penicillium aethiopicum]
Length = 349
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 70/253 (27%), Gaps = 17/253 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
M + L+E ++ DL L + DR S + + LGGK R V
Sbjct: 1 MATSTTTSLKEFLSVFPQLVADLRALCLEEYQLPACVWDRFESTLNHNTLGGKCNRGLSV 60
Query: 59 TECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY---IRRGKPTVH 108
+ L + A +G +E + L+ DD+ +
Sbjct: 61 IDSVRLLRDGLELSPAEYFDAAVLGWLVELLQATMLVLDDIMDGSPTRRGKPSWYRVPGV 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
A + + + + + L ML
Sbjct: 121 GMAAVNDATMLESAIYMLLKKYFAGRAIYLPVVDLFHETALQIELGQAFDMLIANEGTPD 180
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADD 226
I KT + + A+ A A+ R +G FQ+ DD
Sbjct: 181 LTTFVPATYSQIVTYKTAFYSFYLPVALALHAVDAATPTNLAAARAILVPMGEYFQVQDD 240
Query: 227 LLDCEED---LPK 236
LDC D L K
Sbjct: 241 YLDCFADPTVLGK 253
>gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348]
gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348]
Length = 279
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 79/225 (35%), Gaps = 24/225 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
ID +++ L ++ + +Y + GK+ R L+ A
Sbjct: 8 RAVIDELVEKFLDESKEWET-------MEMSKYIMRDGKRFRGTLMFLFNGALGGEEKDA 60
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
A E +H SL DD+ +D IRRG Y I N L+ A IIS
Sbjct: 61 YPGALATEILHSASLALDDI--VDYDEIRRGMKAAWAVYTNRKVIFVSNYLIPTALSIIS 118
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + + ++D + + ++KT +L
Sbjct: 119 GYGDKALRISVDLWKDT-------------AVGALKDMYGKDEDYVRTIELKTASLFKLP 165
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEEDLPK 236
+ + S + L G++LGII+QL DD +D +D K
Sbjct: 166 TMLSSFSSGRS-EFLDTLMEAGKDLGIIYQLIDDYVDCVTQDKDK 209
>gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 689
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 79/234 (33%), Gaps = 21/234 (8%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVN--HL 70
R+ LD + + A+ + G + +R L +
Sbjct: 13 RLQADLDRVRDAFGPVRVHGRPEL--DALTHEETGASRGLVRPTLALLSYYVLTDPSEPA 70
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
V AA + MD+ Y RRG+P+ + + + AI+AG+ ++ +
Sbjct: 71 DDRAVLAAAAAELLHLGALYHDDVMDHAYERRGRPSANALWGQHLAILAGDCVMLSGLGM 130
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ + + + + D+ E KT L
Sbjct: 131 LAELGRREVAEGVAASERMCAG-------MVRESADLHAASRSEESYLQAVGGKTAELFA 183
Query: 191 FACESGAIMAHAS-----QNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
AC GA+ A+ + +E L FG LG +QL DD+LD +L K
Sbjct: 184 LACRLGAMQANGNGGRQEDGREEALAGFGWQLGHAYQLRDDILDLTSTAEELGK 237
>gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 297
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M GA +A A L + G FQLADDLL D K
Sbjct: 140 YKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGDPRRTGK 197
>gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 355
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
M GA +A A L + G FQLADDLL D K
Sbjct: 198 YKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGDPRRTGK 255
>gi|14279425|gb|AAK58594.1|AF268889_1 farnesyl pyrophosphate synthase [Humulus lupulus]
Length = 342
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 74/232 (31%), Gaps = 16/232 (6%)
Query: 15 RIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------ 67
+ +IL +LL A + + Y + GGK R V + L
Sbjct: 10 EVYSILKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYQLLKGGKELTE 69
Query: 68 -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLT 125
+G IE + Y L+ DD+ MDN RRG+P A G L
Sbjct: 70 EEIFLTSALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPKVGLIAANDGILLRN 127
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMI 180
+ I+ + + + G + + I+ ++ ++
Sbjct: 128 HIPRILKKHFKGKSYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSIPLHHRIV 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q +MA + + ++ +G FQ+ DD LDC
Sbjct: 188 QYKTAYYSFYLPVACALVMAGENLDNHVDVKNVLIEMGTYFQVQDDYLDCFG 239
>gi|13537421|dbj|BAB40665.1| farnesyl pyrophosphate synthase [Humulus lupulus]
gi|13537423|dbj|BAB40666.1| farnesyl pyrophophate synthase [Humulus lupulus]
Length = 342
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 74/232 (31%), Gaps = 16/232 (6%)
Query: 15 RIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------ 67
+ +IL +LL A + + Y + GGK R V + L
Sbjct: 10 EVYSILKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYQLLKGGKELTE 69
Query: 68 -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLT 125
+G IE + Y L+ DD+ MDN RRG+P A G L
Sbjct: 70 EEIFLTSALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPKVGLIAANDGILLRN 127
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMI 180
+ I+ + + + G + + I+ ++ ++
Sbjct: 128 HIPRILKKHFKGKSYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSIPLHHRIV 187
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
Q +MA + + ++ +G FQ+ DD LDC
Sbjct: 188 QYKTAYYSFYLPVACALVMAGENLDNHVDVKNVLIEMGTYFQVQDDYLDCFG 239
>gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
18811]
gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
18811]
Length = 332
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 9/214 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L +L + ++ D + AIR L GK +R L + L + N+ + A
Sbjct: 20 LHAILTEMSASWHIGF-DEIDRAIRSQLNAGKLVRPALTLIFSQLSDQNYNKSAISLGAS 78
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + +D +RRG ++ Q+ + TA+ AG+ LLT F ++ S +
Sbjct: 79 VELLHLATLI-HDDVIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLDSADKPVA 137
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + + +Q + + + K KT AL + G +
Sbjct: 138 NKLALTALQEILFGELVQKQNRYNLDTTFPTYFSQ------IKGKTAALFKLSATFGLVS 191
Query: 200 AHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + + GEN+GI FQL DD LD E
Sbjct: 192 SKTYNTELLDTVSKLGENIGITFQLLDDYLDFES 225
>gi|50292709|ref|XP_448787.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528100|emb|CAG61757.1| unnamed protein product [Candida glabrata]
Length = 351
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 58/217 (26%), Gaps = 15/217 (6%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIH 83
M + + S++ Y GGK R V + ++ +V CI
Sbjct: 30 MPKEAIEWYESSLNYNTPGGKLNRGLSVVDTYAILKGYESVDDMKDDEYKKVALLGWCIE 89
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
M + I R + V I + + A + K D+
Sbjct: 90 LLQAYFLVADDMMDKSITRRGQPCWYRVKNVNEIAINDAFMLEAAIYVLLKKHFRNDSYY 149
Query: 144 SQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L+ + + +F F++
Sbjct: 150 VDLLELFHDVTFQTELGQLLDLITAPEDHVDLSKFSLSKHSFIVIFKTAYYSFYLPVALA 209
Query: 197 AIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE 232
A + + ++ + LG FQ+ DD LDC
Sbjct: 210 MYAAGVNDSKDLKQAQDVLIPLGEYFQIQDDYLDCFG 246
>gi|169624321|ref|XP_001805566.1| hypothetical protein SNOG_15418 [Phaeosphaeria nodorum SN15]
gi|111055963|gb|EAT77083.1| hypothetical protein SNOG_15418 [Phaeosphaeria nodorum SN15]
Length = 347
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 71/251 (28%), Gaps = 21/251 (8%)
Query: 5 LPSKLQENSK---RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+P+ LQE RI L Q + + D ++ Y +GGK R V +
Sbjct: 1 MPTTLQEFESVWPRIRADLQAHCQQYK--LPQESLDWFTKSLDYNTVGGKCNRGMSVIDT 58
Query: 62 AS------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A+ L + + MD+ RRG P ++
Sbjct: 59 AAILTNKTLDPASEDYFRPALLGWMIELLQAFFLVSDDIMDSSKTRRGSPCWYLAPKVGM 118
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQD 169
I +L A ++ + + + + L + + + D
Sbjct: 119 IAINDAFMLESAIYLLLKKHFRQEKSYIDMVELFHEVTFQTECGQLCDLITAPEDNVNLD 178
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLL 228
F + F++ A + + +G FQ DD L
Sbjct: 179 NFSLDKFSFIVIYKTAYYSFYLPVALALYYVGAATPKNLQTAHDILIPMGEYFQAQDDYL 238
Query: 229 DCEED---LPK 236
D D L K
Sbjct: 239 DAFADPKVLGK 249
>gi|221056306|ref|XP_002259291.1| Farnesyl pyrophosphate synthase [Plasmodium knowlesi strain H]
gi|193809362|emb|CAQ40064.1| Farnesyl pyrophosphate synthase, putative [Plasmodium knowlesi
strain H]
Length = 375
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 66/264 (25%), Gaps = 36/264 (13%)
Query: 5 LPSKLQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + L + L + +++ L Y LGGK R LV
Sbjct: 16 FKNMYDKYRDAFLNHLKEYALEEEIKEHISKYYKLLFD---YNCLGGKYNRGILVILIYE 72
Query: 64 ------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ ++ A + IE + L+ DD+ ++ + + A+
Sbjct: 73 YVKNRDINSIEWEKAACLAWCIEILQASFLVADDIMDKGEKRRKKYCWYLLKDVETKNAV 132
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML------------ 165
L +++I + + G +
Sbjct: 133 NDILLLYNSIYKLIEIYLRNESCYVDILSTFRDATLKTIIGQHLDTNIFSDKYTDLNKEI 192
Query: 166 ------------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLR 211
+ E ++ G ++ +++
Sbjct: 193 DVNNINVPEQEIININMVNFEVYKNIVIHKTAYYSFFLPIVCGMLLGGIAVDNLIYKKIE 252
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
+G FQ+ DD LD D
Sbjct: 253 GISMLMGEYFQVHDDYLDVFADSK 276
>gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster]
Length = 245
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+S +D RRGKP+V+ ++ +AG+ +L+ A +I+ ++ +
Sbjct: 1 MVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIV 60
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ++ L +Q + E KT +L+ A ++ A++A A
Sbjct: 61 LSQILTDLVQGEFMQL------GSRETENERFAHYLTKTYRKTASLIANALKATAVIAQA 114
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
N E +G N+G+ FQL DD+LD
Sbjct: 115 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTE 147
>gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 360
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 65 FDVLAGDVTPDWRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHHALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
denticolens F0305]
gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase
[Parascardovia denticolens DSM 10105]
gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
denticolens F0305]
gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase
[Parascardovia denticolens DSM 10105]
Length = 371
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 87/261 (33%), Gaps = 29/261 (11%)
Query: 1 MNGGLPSK-LQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRS 55
MN + K + + + L + L + + H D L AL GGK++R+
Sbjct: 1 MNMEISRKTIDDRLSYLVSQNLREALFEGDFAVPVAHEDYLALLTDQALSSSRGGKRLRA 60
Query: 56 FLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD------------NGYI 100
L+ L + A+ + AIE +L+HDD+
Sbjct: 61 LLLCRTCQALRLPEEDWDAAIDLACAIEIFQTGALVHDDIIDDSDLRRGAPSAHKAFASH 120
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
+ + Q ++ G+ L T + ++I ++L + ++ + +
Sbjct: 121 LLKRSSTARQDGLGLGLMLGDLLATESVDLIQEASSRLSVPESLKSVIMTAFLTMHRQVE 180
Query: 161 GGQMLDIQDEFIDETQVFMI--------QKMKTGALMCFACESGAIMAHASQNEKERLRC 212
GQ+LD+ E +D I + Q +
Sbjct: 181 IGQVLDLSMETVDLHDPASIEGGALATYVWKTASYTTIAPLRIAFLACGLDQETSHEVSQ 240
Query: 213 -FGENLGIIFQLADDLLDCEE 232
G LG+ FQL DDL+D
Sbjct: 241 AVGLPLGVAFQLKDDLIDVTG 261
>gi|302812450|ref|XP_002987912.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
gi|300144301|gb|EFJ10986.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
Length = 374
Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 67/236 (28%), Gaps = 13/236 (5%)
Query: 10 QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA------ 62
+ D I +LL + + + + + Y + GGK R V +
Sbjct: 36 DKFVAAFDKIKKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLLKSE 95
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY---IRRGKPTVHIQYDEVTAII 118
L A +G IE + Y L+ DD+ + K A++
Sbjct: 96 DELSRDEIEQAFALGWCIEWLQAYFLVMDDIMDDSHTRRGKPSWFKQPNVGLVAANDALL 155
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
N + + + T + ++ +
Sbjct: 156 LRNHVPRILRKYFHGQLYYFDLRELFDEVEYQTACGQMLDLITSPAGKVDLSKYVMETYL 215
Query: 179 MIQKMKT-GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
I K KT M+ S N K E + +G FQ+ DD LDC
Sbjct: 216 RIVKFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDCYG 271
>gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1]
gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
Length = 306
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 5/214 (2%)
Query: 22 DLLLQTASHMQTQHN--DRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
LL H+ T + L +A+R A GK +R+ LV A + A ++ A
Sbjct: 12 RLLDALDRHLPTHAHAEPSLRAALRQLASHPGKLVRAQLVLIGAEQHGWSAAAAEQLACA 71
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
IE H SL+ DDLP MDN RRG+P VH ++ + TAI+A L+ A+ + +
Sbjct: 72 IEFFHVASLVLDDLPCMDNAETRRGQPCVHRRHGDATAILAALALINRAYALAGEAFLRA 131
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKMKTGALMCFACESG 196
+R + L +G G++GGQ D+ D + I KTGAL
Sbjct: 132 PRTVRRAAVTCLHRALGHAGLVGGQAWDLAFARTDRSSRTVAKIAAAKTGALFELTVLLP 191
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ A AS E+ LR G+ FQ ADDL D
Sbjct: 192 ALAAPASGVERRWLRALCVYWGLQFQAADDLRDV 225
>gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
Length = 298
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 31/231 (13%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++I+ + +L + + + GK++R+ L+ + A N
Sbjct: 2 LNAVERKIEQFIVELDDKEVMGLYAKFPQ------------GKRLRAKLILKIA----GN 45
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
L+ ++ A +E IH SL+HDD+ +D+ Y RR KP+++ Y TAI+ G+ L + F
Sbjct: 46 GLSVVKTAAVVEMIHAASLLHDDV--IDDAYTRRSKPSLNALYGNKTAIMLGDILYSKGF 103
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+ ++ + + + G++ D+ I T + M
Sbjct: 104 FEL----------NNISSEVAKIVSNAVTQLSLGELKDVSLSKIFNTDKEIYLDMIYQKT 153
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
S A + KE +G NLG+ FQ+ DDLLD D L K
Sbjct: 154 ASLIEASAGAAAVLAGKPKEAYMTYGRNLGMAFQMIDDLLDITSDAVTLGK 204
>gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74]
gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74]
Length = 390
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 13/226 (5%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKK-IRSFLVTECASLFNVNHLT 71
DT + + + RL +A+ R+ + G++ R LV L +
Sbjct: 51 DTWIPARAAALDPATRARLAPRLHAALAVPVRHLVDAGRRRWRPGLVAAAIDLLGGDSEH 110
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEI 130
+ AAIE H SL+ DD+ + A A +
Sbjct: 111 YGPLCAAIELAHTGSLMVDDVQDGSPLRRGSPAAHLVFGTATALNAGTHAYFAFDRAVRL 170
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-------QKM 183
++ L +R + +L QG+ E + + ++
Sbjct: 171 TAAHDPALAGRLRDVFLAALRSAHAGQGLDITGHRAEMAEAVATGDARHVLALVRLTHRL 230
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
KTGA+ CE+ A++ A + L FGE LG +Q DD+ D
Sbjct: 231 KTGAMAALGCETAALVTAADGPRRRALAAFGEALGTAYQFTDDVAD 276
>gi|291000304|ref|XP_002682719.1| predicted protein [Naegleria gruberi]
gi|284096347|gb|EFC49975.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 67/212 (31%), Gaps = 21/212 (9%)
Query: 43 IRYALLGGKKIRSF------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+ Y + GK R L+ + + A +G IE + + LI DD+ MD
Sbjct: 1 LEYNVPHGKLNRGLAVVDTLLILNNYQISQEDFKLASILGWCIEFLQAFFLIADDI--MD 58
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
RRG+P + D ++ II + + + +
Sbjct: 59 ASVTRRGQPCWYKLNDVKMTACNDYLIVESQIYIILKKYFKNDLYVPLVDLFHQVSYMTE 118
Query: 157 QGMLGG------------QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-S 203
G L F ET +++ G I++
Sbjct: 119 LGQLHDLRSLPPNVDKNSSDEIPFHTFTIETYSLIVKYKTAFYSFYLPLYCGLILSGKLD 178
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+N +++ +G FQ+ DD LDC D
Sbjct: 179 ENIRKQTLDISIAMGEYFQIQDDYLDCYGDPE 210
>gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti]
gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti]
Length = 249
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D + RRGKP+V++ ++ AG+ +L A +++ K +I
Sbjct: 5 MIHTASLVHDDVIDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDEVTHI 64
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
SQ++ L +Q + + +T KT +L+ + ++ A+++ A
Sbjct: 65 LSQVLTDLVQGEFMQLGSKETENERFAHYFTKT------YRKTASLIANSLKAVAVLSGA 118
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E +G NLG+ FQ DDLLD
Sbjct: 119 DEQMVELSFQYGRNLGLAFQFVDDLLDFVSSSE 151
>gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
subsp. longum F8]
Length = 360
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRG+P+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITCRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|301105393|ref|XP_002901780.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
gi|262099118|gb|EEY57170.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
Length = 345
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 60/223 (26%), Gaps = 13/223 (5%)
Query: 26 QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC--ASLFNVNHLTALR-VGAAIECI 82
+T + D + + Y +GGK R V C A L+ + +
Sbjct: 24 RTKLQLPQDALDWVDEVVEYNCIGGKLNRGISVVHCTQAMAPGKELTPELKEKASVLGWC 83
Query: 83 HCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+ + + + I R + V I + L AF K +
Sbjct: 84 IEWLQAFFLIADDIMDESITRRGQPCWYRKPNVKMIAINDAFLLEAFVFQILKKHFRSEP 143
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQKMKTGALMCFAC 193
L+ + + + L Q F E ++ +
Sbjct: 144 YYVDLVETFHDVVFHTEIGQLLDLTSQPLDGEVYLDRFTVERYRQIVINKTAYYTFYLSA 203
Query: 194 ESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + +G FQ+ DD LDC D
Sbjct: 204 ACAMFLNGVVDEASHSLAKNICVQIGEYFQIQDDFLDCYGDEK 246
>gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica]
Length = 349
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 12/212 (5%)
Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ +L ++ Y L GGK R + A V+ AL +G A+EC+ L+
Sbjct: 41 KPASKQLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLV 100
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ MD+ RRG+ + D I + I+ + +
Sbjct: 101 VDDI--MDSSVTRRGRACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELF 158
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHAS 203
I G + SG + A
Sbjct: 159 EWATIITEMGQTLDMQNSECAHVDLNHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQD 218
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
N +L+ +G FQ DD +DC +
Sbjct: 219 SN-CSQLKEITLQMGHYFQAQDDFIDCFGNPE 249
>gi|300079894|gb|ADJ67472.1| farnesyl pyrophosphate synthase [Artemisia annua]
Length = 343
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 14/243 (5%)
Query: 1 MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ L S + K DT+ +L+ A + + Y + GGK R V
Sbjct: 1 MSSIDLKS---KFLKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNIPGGKLNRGLSVV 57
Query: 60 ECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
+ L + L + MD + RRG+P
Sbjct: 58 DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDESHTRRGQPCWFRLLKVGM 117
Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A G L + I+ + + G + + + E
Sbjct: 118 IAANDGILLRNHVPRILKKHFRGKPYYEDLVDLFNEVEFQTASGQMIDLITTLVGEKDLS 177
Query: 175 TQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I + +M ++ ++ +G FQ+ DD LD
Sbjct: 178 KYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLD 237
Query: 230 CEE 232
C
Sbjct: 238 CFG 240
>gi|85543983|pdb|1YHK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase
gi|85543984|pdb|1YHL|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
Diphosphate Synthase With Risedronate, Dmapp And Mg+2
gi|288563001|pdb|3IBA|A Chain A, Crystal Structure Of The Complex Of Trypanosoma Cruzi
Farnesyl Diphosphate Synthase With Zoledronate, Ipp And
Mg2+
gi|288563002|pdb|3ICK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Minodronate And Isopentenyl Disphosphate
gi|288563003|pdb|3ICM|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Isopentenyl Pyrophosphate, Mg2+ And
1-(2-
Hydroxy-2,2-Bis-Phosphono-Ethyl)-3-Phenyl-Pyridinium
gi|288563004|pdb|3ICN|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With Isopentenyl Pyrophosphate And
3-Fluoro-1-(2-
Hydroxy-2,2-Bis-Phosphono-Ethyl)-Pyridinium
gi|288563005|pdb|3ICZ|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With
1-(2,2-Bis-Phosphono-Ethyl)-3-Butyl-Pyridinium And
Isopentenyl Pyrophosphate
gi|288563006|pdb|3ID0|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
In Complex With
3-Fluoro-1-(2-Hydroxy-2,2-Bisphosphono-Ethyl) Pyridinium
gi|14647139|gb|AAK71861.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi]
Length = 362
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 71/257 (27%), Gaps = 30/257 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+ L + L D L + L + LGGK R V
Sbjct: 2 ASMERFLSVY-DEVQAFLLDQLQS-KYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 59
Query: 59 ---TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDE 113
L + + H + MD +RRGKP +
Sbjct: 60 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIG 155
T +G++ ++ I + + + S+ +
Sbjct: 120 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNK 179
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFG 214
L + M EF +++ T G ++ A+ + + L
Sbjct: 180 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVA 239
Query: 215 ENLGIIFQLADDLLDCE 231
+G FQ+ DD++DC
Sbjct: 240 HLIGEYFQVQDDVMDCF 256
>gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
Length = 288
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ + RI+ L + L Q RL +A+R A+ G ++R L A ++
Sbjct: 2 DVTNRIERALTEALNQADM---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDN 58
Query: 70 LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A E +HC SLIHDDLP D +RRG+P+VH + E A++AG+ A
Sbjct: 59 PGITEAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGD-----AM 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + +L+ G G+ G + E E + + KTGAL
Sbjct: 114 IVLAFQTIARAEGPADRLLKLTQIIGGAVGVPFGIVAGQAWECETEINLAHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A GA A + R GE +G +Q+
Sbjct: 174 FVAATAMGAASAGSDPE---PWRMVGEKIGEAYQV 205
>gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 298
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
I+ D +L+ + + L L GK +RS L+ + +N +
Sbjct: 5 KIVKDRILEFVKECDDEKSIELFG----HLATGKMLRSKLIL---KIAGINEESIKLCAI 57
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
++ +D RRG P+V+ YD TAI+ G+ L + AF +S +
Sbjct: 58 VE---MIHAASLLHDDVIDEATTRRGSPSVNALYDAKTAIMFGDVLYSKAFTELSQMNKK 114
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ NI S + + + Q D + KT +L+ + S A
Sbjct: 115 VAYNISSAVTKLSIGEMMDIDL-------TQTFNTDYNLYLDMIYKKTASLIEASAASAA 167
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
I+A+ + + +G+NLG+ FQ+ DD+LD +D L K
Sbjct: 168 ILANKDEEKYAL---YGKNLGLAFQMIDDILDITQDAQTLGK 206
>gi|56789674|gb|AAH87886.1| Farnesyl diphosphate synthetase [Mus musculus]
Length = 353
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L + H + RL + Y LGGK R
Sbjct: 1 MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L M Q
Sbjct: 121 KPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 VQDDYLDLFGDPSVTGK 257
>gi|212534902|ref|XP_002147607.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC
18224]
gi|210070006|gb|EEA24096.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC
18224]
Length = 347
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 16/236 (6%)
Query: 11 ENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV------TECAS 63
E + ++ D++ T + + +++ ++GGK R V
Sbjct: 9 EFEAFVHPLIKDIVEATDKYNLPENAKKWFFNSLNANIVGGKMNRGMSVPDTGSILLGRP 68
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L +G E + + L+ DD+ MD RRG+P + Q I +
Sbjct: 69 LTEEELNHLSVLGWLTELLQAFFLVSDDI--MDGSITRRGQPCWYRQEGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A +I ++ + + L + + ++ +
Sbjct: 127 LESAIYVILKKYFRSHPAYADFIDIFHETSWQTELGQLCDLITAPEDNVDLNNFSMEKYT 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A AS ++ LG FQ+ DD LD
Sbjct: 187 FIVKYKTAYYSFYLPVALALYYLQVASPKNLKQCEDILIPLGEYFQIQDDYLDAFG 242
>gi|267847005|gb|ACY80695.1| farnesyl pyrophosphate synthase [Cyclocarya paliurus]
Length = 342
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 68/227 (29%), Gaps = 12/227 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASL-------FNVNH 69
++L L+Q T+ + + + Y + GGK R V + L N
Sbjct: 13 SVLKSELIQDPDFDFTEDSRLWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGKELTNDEI 72
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A +G IE + Y L+ DD+ G + II N +
Sbjct: 73 FLACALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRLPKVGMIAVNDGIILRNHIPRI 132
Query: 127 AFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ ++ +++ + + ++ ++Q
Sbjct: 133 LKNHFREKNYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLSLHQRIVQYKTA 192
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA + ++ +G FQ+ DD LDC
Sbjct: 193 YYSFYLPVACALLMAGENLENHINVKNILIEMGNYFQVQDDYLDCYG 239
>gi|255017999|ref|ZP_05290125.1| hypothetical protein LmonF_10200 [Listeria monocytogenes FSL
F2-515]
Length = 205
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
QM + + KT L +C SGA + A++ + G LG+ F
Sbjct: 32 DQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAF 91
Query: 222 QLADDLLDCEE-DLP 235
Q+ DD+LD D
Sbjct: 92 QIIDDVLDYTSTDEG 106
>gi|73961593|ref|XP_537252.2| PREDICTED: similar to farnesyl diphosphate synthase [Canis
familiaris]
Length = 420
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 72/259 (27%), Gaps = 25/259 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHND------RLLSAIRYALLGGKK 52
MNG KL ++ + +++ + H + RL + Y +GGK
Sbjct: 68 MNGD--QKLDAYAQARQDFIQHFPQIVKILTEDGMGHPETGDAIARLKEVLEYNAVGGKY 125
Query: 53 IRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTV 107
R V +LR + MD+ RRG+
Sbjct: 126 QRGLTVLIAFQELVEPRKQDAASLRRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICW 185
Query: 108 HIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLG 161
+ + AI L + ++ + + Q L +
Sbjct: 186 YQKPGIGLDAINDALLLEACIYRLLKVYCREQPYYLNLIELFLQSSYQTEIGQTLDLITA 245
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGII 220
Q F ++ +++ + MA + E + +G
Sbjct: 246 PQGSVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEF 305
Query: 221 FQLADDLLDCEED---LPK 236
FQ+ DD LD D K
Sbjct: 306 FQIQDDFLDLFGDPSVTGK 324
>gi|156547931|ref|XP_001604464.1| PREDICTED: similar to farnesyl diphosphate synthase [Nasonia
vitripennis]
Length = 364
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 61/236 (25%), Gaps = 16/236 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTECASLFNVNH--LTALR 74
++ DL + L ++Y + GKK R LV L + +R
Sbjct: 34 DVVRDLTEAGRHLDVPEATKWLAKVLQYNVPSGKKNRGLSLVYAYRKLAPPDQLTEDNVR 93
Query: 75 VGAAIECIHCYSLIHD-DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ + L + + R ++ + +G+L
Sbjct: 94 LARILGWCVEMVQAFFLVLDDVMDHSESRRGQPCWYRHSNIGLAAINDGILIEQAVYQLL 153
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGM--------LGGQMLDIQDEFIDETQVFMIQKMKT 185
L +L N M D F + +++
Sbjct: 154 RTHFRGKPCYVDLFETLQQNTLKTTMGQTLDQLATNFSKKPNLDLFTMDRYNSIVKYKTG 213
Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
+ A + + +G FQ+ DD LDC D K+
Sbjct: 214 YYSFVMPVQLAMYFAGVKDPEMHRQAKTILLEMGHFFQVQDDYLDCFGDPQVTGKQ 269
>gi|322800773|gb|EFZ21659.1| hypothetical protein SINV_04639 [Solenopsis invicta]
Length = 348
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 67/232 (28%), Gaps = 15/232 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
I+ D+ + + +Y + GKK+R + + L N
Sbjct: 18 DIVQDITEAARNLNIPDVAKWMEKVSQYTVPKGKKLRGLTLIKVYKSLVSNDQLTEDNIR 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +E + Y L+ DD+ + ++ E A+ G L + + I
Sbjct: 78 LVQILAWCVELMQTYILVLDDIQDHSLLRRGQPCWHLYSNVGEA-AVNDGVLLESAMYYI 136
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID------ETQVFMIQKMK 184
I + + L G + + + +I+
Sbjct: 137 IRKHFKGKECYVNLVETFQDIIFKTLMGQCMDLYSSNFGKKPNLDLFTIDRHNTIIEIKT 196
Query: 185 TGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A + + + +G +FQ+ DD LDC D
Sbjct: 197 AYYTYVLPTFAAMHFAGIKNPEMFRQAKIIALEIGHMFQVQDDYLDCFGDTE 248
>gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris
CGA009]
Length = 288
Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ + RI+ L + L Q RL +A+R A+ G ++R L A ++
Sbjct: 2 DVTNRIERALTEALNQADM---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDN 58
Query: 70 LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A E +HC SLIHDDLP D +RRG+P+VH + E A++AG+ A
Sbjct: 59 PGITEAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGD-----AM 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + +L+ G G+ G + E E + + KTGAL
Sbjct: 114 IVLAFQTIARAEGQADRLLKLTQIIGGAVGVPFGIVAGQAWECETEINLAHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A GA A + R GE +G +Q+
Sbjct: 174 FVAATAMGAASAGSDPE---PWRMVGEKIGEAYQV 205
>gi|62959167|gb|AAY23691.1| farnesyl diphosphate synthase [Roseobacter litoralis Och 149]
Length = 144
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 7/135 (5%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+PTVH ++D+ TA++AG+ L T AFE+++ P +R+ L LSL G QGM+
Sbjct: 13 RRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLALSLARASGAQGMV 72
Query: 161 GGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
GQ LDI E ++ +Q+ KTGAL+ ++ ++GA +A A L+ + +
Sbjct: 73 LGQALDIAAETAHTPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTG---ALKRYAQA 129
Query: 217 LGIIFQLADDLLDCE 231
LG+ FQ+ADD+LD E
Sbjct: 130 LGLAFQIADDILDVE 144
>gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
Length = 288
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN- 68
+ + RI+ L D + A RL A+RY++ G ++R L A+ +
Sbjct: 2 DVTNRIEQALTDAIGMAA---VAGCPPRLAEAMRYSVFPRGARVRPRLCHSVAAACGEDN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
GAA+E +HC SL+HDDLP D RRG+P+VH + E A++ G+ L+
Sbjct: 59 PAATEAAGAALELMHCASLVHDDLPCFDGADTRRGRPSVHKTFGEPLAVLTGDALI---- 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ D ++L+ G+ G + E E + +
Sbjct: 115 -VLAFQTIARVDCDPARLLKLTMTVGEAVGVPFGIVAGQAWECESEINLAHYHR---SKT 170
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
+ A A ++ + R GE +G +Q+
Sbjct: 171 GALFVAATAAGAASAGADPAPWRLVGEKIGEAYQV 205
>gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 361
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 56/208 (26%), Gaps = 22/208 (10%)
Query: 50 GKKIRSFLVTECASLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLP 93
GK+ R+ + + I ++ LP
Sbjct: 50 GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAII------AGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ ++ D + A N + A +S N +
Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFFVTMQ 169
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ + L + L E + +I+ + GA + AS +
Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLI 229
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E+L F LG+ +QL DD L D
Sbjct: 230 EQLEGFATPLGVAYQLRDDDLGIFGDQE 257
>gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212]
Length = 298
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 83/182 (45%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK++R + A+ AL G A+E H SL+ DDLP MD+ +RRG+PT+H
Sbjct: 52 PGKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLH 111
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
++ E A++A LL + +I + + + + L+ + L
Sbjct: 112 RRHGEDAAVLAAVALLNQSTRLILQSRAPSEARLGALDDLTQAIGFDGLAEGQMRDLRDD 171
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
D + I +KTGAL A G M ++ RL FGE +G FQL DDL+
Sbjct: 172 PVQRDVVALRRINDLKTGALFVAAARGGGRMGGGDADDLARLAAFGEAVGFAFQLCDDLM 231
Query: 229 DC 230
D
Sbjct: 232 DA 233
>gi|71425811|ref|XP_813173.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
Brener]
gi|70878032|gb|EAN91322.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
Length = 346
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 71/257 (27%), Gaps = 30/257 (11%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+ L + L D L + L + LGGK R V
Sbjct: 2 ASMERFLSVY-DEVQAFLLDQLQS-KYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVA 59
Query: 59 ---TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDE 113
L + + H + MD +RRGKP +
Sbjct: 60 EGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGV 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIG 155
T +G++ ++ I + + + S+ +
Sbjct: 120 TTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNK 179
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFG 214
L + M EF +++ T G ++ A+ + + L
Sbjct: 180 LDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVA 239
Query: 215 ENLGIIFQLADDLLDCE 231
+G FQ+ DD++DC
Sbjct: 240 HLIGEYFQVQDDVMDCF 256
>gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68]
gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68]
Length = 360
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHHALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
saccharovorans 345-15]
gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
saccharovorans 345-15]
Length = 310
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 12/208 (5%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + S + L Y + GGK R F+ A N A A+E +
Sbjct: 24 IEPELNSIVSRLEMAGLEGLASYIVKGGKMFRGFMTMLFAEAAGGNLDRAKDAAIAVELV 83
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
SL DD+ +D RRG P+ + Y + +A ++ P
Sbjct: 84 QGASLALDDI--IDKDAERRGGPSAWVLYGIGKSAMAS---------LLLVPTALKLVEQ 132
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
L LS + + G M ++ + + +KTG+L A G I A+
Sbjct: 133 YGPLALSYSITAWESMVRGEIMDAYSSLNLEPVEYLQLASLKTGSLFSLASTLGVIAANH 192
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ER +G +G +QLADD+ D
Sbjct: 193 -EEYAERAWNYGNIVGTAYQLADDITDF 219
>gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
Length = 321
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 84/222 (37%), Gaps = 15/222 (6%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
+ + IL+ +Q + + LL Y + GK+ R+ + N+
Sbjct: 5 DMDEFNEILEKC---RDQSLQKEQDAILLEPFAYIQQIPGKQFRAKMALAFNHWLNIPEE 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+G ++ +H SL+ DD+ DN +RRG P H Y + I AGN +L +
Sbjct: 62 KLAAIGEVVQMMHNSSLLIDDIE--DNSILRRGIPVAHKIYGIASTINAGNYVL-----V 114
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
++ K + +Q +++ +G E + + KTG L
Sbjct: 115 LALAKVHGLGHPEAQQVVTEQLLELHRGQGMEIYWRDNFICPTEAEYKQMVIRKTGGLFM 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + + + + +L LG+ FQ+ DD +
Sbjct: 175 LAIRLMQLFSD-DKKDFTKLTAI---LGLSFQIRDDYCNLTS 212
>gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1]
gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1]
Length = 282
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 19/212 (8%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
I+D L+ + ++ ++ +Y + GK+ R LV A + A
Sbjct: 13 IIDSLVTKFVDDVKDW---EIMEMSKYIMKDGKRFRGTLVFLFNDALGGEEKNAYQGALA 69
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
E +H SL DD+ +D RRG + Y I N L+ A +IIS +
Sbjct: 70 TEILHSASLALDDI--VDYDLTRRGMASAWAVYTNRRVIFVSNFLIPTALKIIS---SYG 124
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
K+ + + L IG + G + F ++KT +L A
Sbjct: 125 KEALNISIELWKDTAIGALKDMYGDK----------REYFKTIELKTASLFKLPAML-AS 173
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++L G LG+I+QL DD +DC
Sbjct: 174 FSSGKKELVDKLLEAGRVLGVIYQLIDDYVDC 205
>gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica]
Length = 349
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 12/212 (5%)
Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ +L ++ Y L GGK R + A V+ AL +G A+EC+ L+
Sbjct: 41 KPASKQLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLV 100
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ MD+ RRG+ + D I + I+ + +
Sbjct: 101 VDDI--MDSSVTRRGRACWYKNQDVGLMAINDALSIEMCVYILLRSLPDYVPVDKLVELF 158
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHAS 203
I G + SG + A
Sbjct: 159 EWATIITEMGQTLDMQNSECAHVDLSHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQD 218
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
N +L+ +G FQ DD +DC +
Sbjct: 219 SN-CSQLKEITLQMGHYFQAQDDFIDCFGNPE 249
>gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum NCC2705]
gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase
[includes: farnesyl pyrophosphate synthetase (Fpp
synthetase) (dimethylallyltransferase);
geranyltranstransferase ] [Bifidobacterium longum
NCC2705]
Length = 372
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 17 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 76
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 77 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHHALEQAVHSG 136
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 137 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 196
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 197 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 256
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 257 DDLLDVVG 264
>gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
Length = 283
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 23/227 (10%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + ID ++ L Q +L +Y L GK+ R+ L
Sbjct: 2 DFIEYWIKTKQLIDDVIQKYLSQIKDL-------DMLEVSKYILKDGKRYRAVLNMFFTE 54
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+L AIE +H SL DD+ +D RRGK + Y + N L
Sbjct: 55 ALGGELSNSLDAALAIEILHSSSLALDDI--VDYDTTRRGKLSAWALYTNRRVVFITNYL 112
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
+ A IIS + + I+D F T ++
Sbjct: 113 IPSALNIISRYGENALKVSLELWKDT-------------AVGAIKDMFGPATSYLSTIEL 159
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L + A A + + + L G+ LGI++QL DD +DC
Sbjct: 160 KTSSLFKLSTALAAFTADR-EKDLDLLLDMGKYLGIMYQLIDDYIDC 205
>gi|4680193|gb|AAD27558.1|AF111710_4 putative farnesyl pyrophosphate synthase [Oryza sativa Indica
Group]
Length = 495
Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 70/235 (29%), Gaps = 20/235 (8%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-------GKKIRSFLVTECASLFNV--- 67
+D ++L + S + DR+ + R G GK R V + L
Sbjct: 160 QWIDRVMLFSPSPFSSCVADRMCFSSRIVSSGFSVGFRSGKCNRGLSVVDSYKLLKGTNV 219
Query: 68 ----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A +G +E + Y L+ DD+ + + + AI G L
Sbjct: 220 LSQEDMFLASTLGWCVEWLQAYFLVLDDIMDDSHTRRGQPCW-FRVPQVGSIAINDGIIL 278
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK- 182
+ ++ + + G L + + E + +
Sbjct: 279 RNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRR 338
Query: 183 ----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +++ + + +GI FQ+ DD LDC D
Sbjct: 339 IVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGD 393
>gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
Length = 347
Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 13/208 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY-I 100
AI GG +IR L+ A + + + + +++
Sbjct: 50 AIEIINRGGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIEDNSLK 109
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+ +H+ Y +I AGN + ++I + + T + G
Sbjct: 110 RRGRSAIHLIYGIDNSINAGNLIYFLPAKLIERSNLKENQKLLIYENYFTTLSNLHLGQG 169
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + + ++KT +L A AI+ + K+ F LG+
Sbjct: 170 IDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKLYSTF-LKLGVY 228
Query: 221 FQLADDLLDC--------EED---LPKK 237
FQ+ DD+ + D KK
Sbjct: 229 FQIIDDIKNIKNKINGKEFGDDLIEGKK 256
>gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 386
Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 73/274 (26%), Gaps = 44/274 (16%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFL--- 57
LP+ L ++ L ++L + Q LL A L GGK++R+ L
Sbjct: 2 SALPAALGRIRPAVEHRLTEVLEDCRRRWEDLGQAAPELLGAASSVLSGGKRMRAVLGAI 61
Query: 58 --VTECA------SLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
A L + + + + + +P+ + R
Sbjct: 62 GCAILSAPEQRAECLTGSDAVHLGAALELYQASALVHDDLMDGADTRRGMPAAHRAFTRD 121
Query: 103 GKPTVHIQYDEVTAIIAGNGLLT-------YAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ + + L +S + + R+ +
Sbjct: 122 HEARGWLGRPQTFGANGAILLGDLLLSLAGEEMSALSQSRVSCETGSRTVQYARTAFDAM 181
Query: 156 LQGMLGGQM-----------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA---- 200
+ GQ D + + ++ ++
Sbjct: 182 TTEVALGQFLDVRSENLPLPWDREPGAAARRMHDDALSVVRHKAARYSVRHPLLIGALLA 241
Query: 201 --HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S E L FGE++GI FQL DD L
Sbjct: 242 GLDPSGPTAEHLAAFGEDVGIAFQLRDDELGVFG 275
>gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
Length = 360
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQASSSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHHALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|74183868|dbj|BAE24508.1| unnamed protein product [Mus musculus]
Length = 353
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L + H + RL + Y LGGK R
Sbjct: 1 MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L M Q
Sbjct: 121 KPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 VQDDYLDLFGDPSVTGK 257
>gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
Length = 361
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 57/208 (27%), Gaps = 22/208 (10%)
Query: 50 GKKIRSFLVTECASLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLP 93
GK+ R+ + + I ++ LP
Sbjct: 50 GKRFRAIAAYMGWVSAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAII------AGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ ++ D + A N + A +S N+ +
Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSMENAHRASNLFVTMQ 169
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ + L + L E + +I+ + GA + AS +
Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLI 229
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E+L F LG+ +QL DD L D
Sbjct: 230 EQLEGFATPLGVAYQLRDDDLGIFGDQE 257
>gi|74141499|dbj|BAE38529.1| unnamed protein product [Mus musculus]
Length = 353
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L + H + RL + Y LGGK R
Sbjct: 1 MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGEAIARLKEVLEYNALGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L M Q
Sbjct: 121 KPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 VQDDYLDLFGDPSVTGK 257
>gi|156082379|ref|XP_001608674.1| farnesyl pyrophosphate synthetase [Babesia bovis T2Bo]
gi|154795923|gb|EDO05106.1| farnesyl pyrophosphate synthetase , putative [Babesia bovis]
Length = 336
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 16/225 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
T LD + + +++ +Q + S AI+Y L GGK IR LV ++++ +
Sbjct: 26 TFLDIAIAEISTYDVSQDDIAYYSHAIQYNLQGGKLIRGTLVVATTRCILGDNISEYQWK 85
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
A+ + + + ++ +IS
Sbjct: 86 LALILGMGWC-----VELLQTAFLVADDIMDKSVMRRSNLCWIIANQFKGNDRLISIFNI 140
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ ++ + L + + L + + G
Sbjct: 141 FTRISMVTILGQHMDTYNTMDISLLDNPTAATALYYRICKN-----KTAYYTFFLPISLG 195
Query: 197 AIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ ++ +L LG +FQ DD LDC D K
Sbjct: 196 MFISEIDEHNINYRKLESVSSLLGHLFQAQDDYLDCYSDPSFSGK 240
>gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 153
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
+LQ + + L + N ++ A++Y ALLGGK++R FLV
Sbjct: 2 DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+F V+ T AA+ECIH YSLIHDDLP+MD+ +RRG PT HI++ E AI+AG+
Sbjct: 57 QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116
Query: 123 LLTYAFEIIS 132
L T AF IIS
Sbjct: 117 LQTLAFTIIS 126
>gi|162538563|gb|ABY19313.1| farnesyl diphosphate synthase 2 [Myzus persicae]
gi|168831500|gb|ACA35007.1| putative mitochondrial isoprenyl diphosphate synthase precursor
[Myzus persicae]
gi|169139042|gb|ACA48700.1| farnesyl diphosphate synthase 2 [Myzus persicae]
Length = 396
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 17/245 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+L I+ DL + + L + ++Y + GGK R ++ +
Sbjct: 54 KDELGNFMAVFPDIVKDLTDTSLQLNKPDVTKWLENLLQYNVPGGKNNRGLILVSSFKML 113
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DDL MDN RRG+P + D A+
Sbjct: 114 SSPSYLTDENLRLSYILGWCVEILQAYQLVMDDL--MDNAITRRGRPCWYRHNDVGLMAV 171
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L ++++ + Q + + + +++
Sbjct: 172 NDGILLEQAIYQLLKKYFKDKPYYTHILELFYDVTMKSAMGQCLDMLTAKSFKSKKLEKY 231
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + ++ +A Q + + ++G FQ+ DD LDC
Sbjct: 232 TMENYKAIVKYKTAYYSFVLPVCLAMRMTNVNDQEIFRQAKVILLDMGQFFQIQDDYLDC 291
Query: 231 EEDLP 235
+
Sbjct: 292 YGNPE 296
>gi|114560101|ref|XP_001160023.1| PREDICTED: farnesyl diphosphate synthase isoform 2 [Pan
troglodytes]
Length = 354
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 69/258 (26%), Gaps = 22/258 (8%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 1 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV----TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ + ++ + + I L S IG L
Sbjct: 121 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 180
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGA---IMAHAS-QNEKERLRCFGENLGIIF 221
D + + A F A + A + E + +G F
Sbjct: 181 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAAGIDGEKEHANAKKILLEMGEFF 240
Query: 222 QLADDLLDCEED---LPK 236
Q+ DD LD D K
Sbjct: 241 QIQDDYLDLFGDPSVTGK 258
>gi|302781879|ref|XP_002972713.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
gi|300159314|gb|EFJ25934.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
Length = 363
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 18/246 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSF--- 56
+ G +K + R+ +L+ + S T + + + + Y + GGK R
Sbjct: 19 VAGSFKAKFMDAYHRLKK---ELITDSESFSHTFESREWVSKMLDYNVPGGKLNRGLSVV 75
Query: 57 --LVTECA--SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
LV + L A +G IE + Y L+ DD+ + +
Sbjct: 76 DSLVLLRSGEELSEDELFLAFALGWCIEWLQAYFLVLDDIMDDSHTRRGQPCW-FRQPKV 134
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---- 168
+ A G L + I++ + + G + +
Sbjct: 135 GLIAANDGILLRNHISRILTRHFHDKPYYQDLRELFDEVEYQTACGQMLDLITTPPGEVD 194
Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADD 226
+++ +T + +++ M+ K E +G FQ+ DD
Sbjct: 195 LSKYVMDTYLRIVKYKTAYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQIQDD 254
Query: 227 LLDCEE 232
LDC
Sbjct: 255 YLDCYG 260
>gi|19882207|ref|NP_608219.1| farnesyl pyrophosphate synthase [Mus musculus]
gi|60392303|sp|Q920E5|FPPS_MOUSE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Cholesterol-regulated 39 kDa
protein; Short=CR 39; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|15824695|gb|AAL09445.1|AF309508_1 farnesyl pyrophosphate synthase [Mus musculus]
gi|26353632|dbj|BAC40446.1| unnamed protein product [Mus musculus]
gi|28913418|gb|AAH48497.1| Farnesyl diphosphate synthetase [Mus musculus]
gi|71060057|emb|CAJ18572.1| Fdps [Mus musculus]
gi|74207484|dbj|BAE39995.1| unnamed protein product [Mus musculus]
gi|148683292|gb|EDL15239.1| mCG17543, isoform CRA_b [Mus musculus]
Length = 353
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L + H + RL + Y LGGK R
Sbjct: 1 MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L M Q
Sbjct: 121 KPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 VQDDYLDLFGDPSVTGK 257
>gi|325067554|ref|ZP_08126227.1| Polyprenyl synthetase [Actinomyces oris K20]
Length = 291
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+ MD +RRG P+ + AI+ G+ L+ A +++++ +
Sbjct: 8 THIATLYHDDVMDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQLMAALGPEAVMAHA 67
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ + L + KTG+L+ + GA++ A
Sbjct: 68 KTFERLCMGQLH-------ETLPRPAGTDPVDHYIQVLADKTGSLIAVSARYGAMLTGAG 120
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ + FGE +G+ FQLADD++D D
Sbjct: 121 THTEQIVEEFGERIGVAFQLADDVIDLMSDSA 152
>gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
43063]
gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
43063]
Length = 361
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 56/208 (26%), Gaps = 22/208 (10%)
Query: 50 GKKIRSFLVTECASLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLP 93
GK+ R+ + + I ++ LP
Sbjct: 50 GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDIIDNAIKRRGLP 109
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAII------AGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ ++ D + A N + A +S N +
Sbjct: 110 AAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLSVENAHRASNFFVTMQ 169
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ + L + L E + +I+ + GA + A+ +
Sbjct: 170 AEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGANDSLI 229
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E+L F LG+ +QL DD L D
Sbjct: 230 EQLEGFATPLGVAYQLRDDDLGIFGDQE 257
>gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL
J2-003]
Length = 129
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L++ K ID L + + RL ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERN------IEPRLKESMLYSIQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
VN L ++ A+E IH YSLIHDDLP+MDN RRGK T H + + TAI+AG+
Sbjct: 57 QALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDA 116
Query: 123 LLTYAFEIIS 132
LLT AF I++
Sbjct: 117 LLTLAFSILA 126
>gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
Length = 329
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 8/154 (5%)
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
++ MD RRG+ TV + AI+ G+ L ++
Sbjct: 81 HNFTLLHDDVMDGDSTRRGRATVWRVWGVNNAILLGDALHA-----LAIRTLTDSLGQGV 135
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAH 201
+ + GQ D E + KT LM AC GA+ A
Sbjct: 136 AVNAITRLEQTCLDLCVGQHQDCSFERCTTVTVPDYLRMAAGKTAVLMACACALGAVSAR 195
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + FG LG+ FQ+ DDL+ D
Sbjct: 196 ADAATVAAVERFGYELGLAFQIVDDLIGIWGDPA 229
>gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 308
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 80/243 (32%), Gaps = 24/243 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------------GGKKIRSF 56
L+ +D L L L Y GK IR
Sbjct: 22 LERARAEVDPALRAALGSL--------PGPLRRIALYHFGWEHADGTSAEEGSGKAIRPA 73
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV AS + V AA ++ MD RR +PT + + A
Sbjct: 74 LVLAAASALGGSEARRAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADA 133
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ L A +++ ++L + Q M + +
Sbjct: 134 ILAGDALQALALGLLAEDPHPAAPAAAARLAHCVVELCAGQH-TDTAMERRGPGEVTLAE 192
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + KTGAL+ AC GA+ A A + L FG G+ FQL DD++ D
Sbjct: 193 TLTMAEAKTGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGDPRR 252
Query: 234 LPK 236
K
Sbjct: 253 TGK 255
>gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis AD011]
gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium animalis subsp. lactis AD011]
gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis DSM 10140]
gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase
[Bifidobacterium animalis subsp. lactis V9]
Length = 366
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 32/249 (12%)
Query: 15 RIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALL--------GGKKIRSFLVTECASLF 65
I+T + +L+ T L + + ++ GGK++R+ L + +
Sbjct: 9 AIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLDAYDVL 68
Query: 66 NVNHLTAL---------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ AIE +L+HDDL + + + A
Sbjct: 69 AGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLRRGKPSAHCALT-SFAGA 127
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QML 165
G GL +++++ T + ++ + ++ M + +
Sbjct: 128 RSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLSMQHDVEVGQVLDLAIERM 187
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGIIFQL 223
+ D + + KT + A A +A +E L G LG FQL
Sbjct: 188 PLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAIGLPLGQAFQL 247
Query: 224 ADDLLDCEE 232
ADDLLD
Sbjct: 248 ADDLLDVTG 256
>gi|148683291|gb|EDL15238.1| mCG17543, isoform CRA_a [Mus musculus]
Length = 420
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L + H + RL + Y LGGK R
Sbjct: 68 MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 127
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V + +L+ + MD+ RRG+ +
Sbjct: 128 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L M Q
Sbjct: 188 KPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 248 GHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQ 307
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 308 VQDDYLDLFGDPSVTGK 324
>gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
Length = 360
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 83/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQASSSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRGKP+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHRALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDIQDEFID 173
G GL +I+++ ++ S+L + + + GQ+LD+ E
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTNALNEAFLTMQREVEIGQILDLAVEMTP 184
Query: 174 ETQVFMIQ--------KMKTGALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + A S ++ G LG+ FQLA
Sbjct: 185 LSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|203582|gb|AAA40960.1| cholesterol-regulated protein CR39 [Rattus norvegicus]
Length = 344
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 71/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L H + R+ + Y +GGK R
Sbjct: 1 MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHI 109
V + +L+ + + MD+ Y RRG+ +
Sbjct: 61 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 121 KPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium
longum DJO10A]
gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
DJO10A]
gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
DJO10A]
gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis 157F]
Length = 360
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRG+P+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|126136094|ref|XP_001384571.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
stipitis CBS 6054]
gi|126091769|gb|ABN66542.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
stipitis CBS 6054]
Length = 350
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 67/232 (28%), Gaps = 15/232 (6%)
Query: 16 IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------N 68
D ++++L + M + D + + Y GGK R V + + N +
Sbjct: 14 FDQLVEELKEVLVGYNMPQEAVDWFVKNLDYNTPGGKLNRGLSVVDTYCILNKTTAVELD 73
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+V I M + R + V I + +
Sbjct: 74 DEKYAKVALLGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLAEGVGNIAINDSFMLEGA 133
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQ 181
+ K D+ L+ + + + D+F + F++
Sbjct: 134 IYVLLKKHFRNDSYYVDLLDLFHEVTFKTELGQLLDLVTADEYVVDLDKFSLDKHSFIVI 193
Query: 182 KMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M+ S + ++++ LG FQ+ DD LDC
Sbjct: 194 FKTAYYSFYLPVALAMYMSGINSAEDLKQVQDILIPLGEYFQIQDDFLDCFG 245
>gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152]
gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
Length = 385
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 71/232 (30%), Gaps = 17/232 (7%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ E ++D + ++LL R+ L GK++R+ L CA L
Sbjct: 68 IAEQIGQVDRRMREILL---------TGGEFDDIYRHILTAPGKRVRAGLALACAQLIPS 118
Query: 68 NHLTALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A + D +RR P+V + A AG L
Sbjct: 119 PDAAPVHDALDIACVWEMFHESSLVHDDICDGSPLRRDAPSVPAAFGVRRAARAGFHLAG 178
Query: 126 YAFEIISSPKTQLKDNIR-----SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
A ++++ + + + G L + D +
Sbjct: 179 KALQVLARVIADNPAAFGTVGTAAGVTYLDRLSDLSLGQLVETIPPTVDHRALRGHYARV 238
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KTG L AC G + L + E L FQ+ DD+ D +
Sbjct: 239 AAAKTGTLFRLACAYGGTAGALEHDRLRDLMDYAERLAFAFQVMDDVRDVDG 290
>gi|195436322|ref|XP_002066117.1| GK22106 [Drosophila willistoni]
gi|194162202|gb|EDW77103.1| GK22106 [Drosophila willistoni]
Length = 411
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 55/224 (24%), Gaps = 9/224 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ DL T ++ + ++Y + GKK R L + +L+
Sbjct: 85 DVVRDLTGVTRAYNCNDAANWFARVLQYNVPRGKKNRGILCVLTYKNLVPADQITPESLK 144
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + + E + A N L + +
Sbjct: 145 LAHYLGWCVEMLQSFFIMSDDVMDNSTTRRGQLCWHRVEGVGLTAINDTLMVENAMFAVL 204
Query: 135 KTQLKDNIRS-----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K Q + EF + ++
Sbjct: 205 KKHFSHLDCYVDLMELFHEISFITTCGQTLDQINSHRKVSEFTMDNYKSIVYNKTAYYTF 264
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + +G FQ+ DD LDC
Sbjct: 265 YLPFALAMHLAGFKDAEAFRQSKTILLEMGHFFQVQDDFLDCFG 308
>gi|50424267|ref|XP_460720.1| DEHA2F08272p [Debaryomyces hansenii CBS767]
gi|49656389|emb|CAG89060.1| DEHA2F08272p [Debaryomyces hansenii]
Length = 350
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 67/238 (28%), Gaps = 15/238 (6%)
Query: 10 QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS----- 63
+ D ++++L + M D + + Y GGK R V +
Sbjct: 8 ERFINEFDQLVEELKAILIGYKMPQDAIDWFVGNLNYNTPGGKLNRGLSVIDTYCILNNT 67
Query: 64 -LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+++ +V CI M + R + V I +
Sbjct: 68 TANDLSSEEYSKVALLGWCIELLQAYFLVADDMMDHSKTRRGQPCWYLNEGVGNIAINDS 127
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDET 175
+ I K + L+ + + + D+F
Sbjct: 128 FMLEGALYILLKKHFRNEKYYVDLLDLFHEVTFQTELGQLIDLITADEEIVDLDKFSLSK 187
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ M+ S+ + +++R LG FQ+ DD LDC
Sbjct: 188 HSFIVIYKTAYYSFYLPVALAMFMSGINSEQDLKQVRDILIPLGEYFQIQDDFLDCFG 245
>gi|151415019|gb|ABS11699.1| farnesyl diphosphate synthase [Matricaria chamomilla var. recutita]
Length = 343
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 75/241 (31%), Gaps = 17/241 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-- 61
L S + K DT+ +L+ A + + Y + GGK R V +
Sbjct: 5 DLKS---KFLKVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVVDSYQ 61
Query: 62 ----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-A 116
L + + +G IE + Y L+ D+ MD + RRG+P A
Sbjct: 62 LLKGGELTDDEIFLSSALGWCIEWLQAYFLVLGDI--MDESHTRRGQPCWFRLPKVGMIA 119
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
G L + I+ + + + + G + + + E
Sbjct: 120 ANDGILLRNHVPRILKNHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGEKDLSKY 179
Query: 177 VFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + +M ++ ++ +G FQ+ DD LDC
Sbjct: 180 SLSVHRRIVQYKTAYYSFYLPVAXALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCF 239
Query: 232 E 232
Sbjct: 240 G 240
>gi|123505919|ref|XP_001329081.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
gi|121912032|gb|EAY16858.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
Length = 334
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 62/228 (27%), Gaps = 12/228 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALR-- 74
I+ + L + L + Y+ GGK R + + +
Sbjct: 16 NIISNYLQSMSVDW---VEKHCLEVLDYSTKGGKLTRGVVCASAFIESTGCDPDSEEAKI 72
Query: 75 -VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ MD RRG + + ++ ++
Sbjct: 73 GYTIGWVLELMQAAFLIADDFMDQSETRRGMICWYKIESVNEQAVNDAMIVENLAFVLLD 132
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
+ ++ I +G + I E+ ++ + +C
Sbjct: 133 SVRSKLNIKSYARLVQYLRTINTITTMGQTLDFINKTKSFESYEVSVRNKTSHYSLCAPI 192
Query: 194 ESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
G I + + ++ E + F LG FQ+ DD D D K
Sbjct: 193 ILGLIASQKFEVTDKFESIEKFALRLGYYFQVQDDYFDVYGDPQVTGK 240
>gi|195333389|ref|XP_002033374.1| GM20447 [Drosophila sechellia]
gi|194125344|gb|EDW47387.1| GM20447 [Drosophila sechellia]
Length = 419
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 60/227 (26%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D++ T ++ + ++Y + GKK R L ++
Sbjct: 93 DLVRDIITVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E + A N L + +
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 212
Query: 135 KTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K ++ L H I Q + EF E +++
Sbjct: 213 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSF 272
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MA + + +G FQ+ DD LDC +
Sbjct: 273 YLPFALALHMAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 319
>gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp.
HF0500_35F13]
Length = 563
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 71/211 (33%), Gaps = 15/211 (7%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA------------IECIHCYSLIH 89
A + GGK R F+ T + +
Sbjct: 233 AYDFLSKGGKHSRPFITLAVYDALTGGQATMAEGATFLAELPDSIRRTAMSIETFHKASL 292
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
D+ R G PT+H ++ TAI G+ L+ + +S+ QL + ++
Sbjct: 293 VHDDIEDDDDFRYGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAADILDM 352
Query: 150 LTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
L G D D+ + I +KT A +G +A
Sbjct: 353 LARAHTRLSEGQGAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLARTVAEI 412
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+E +R F NLG+ FQ+ +DL D + D K
Sbjct: 413 EEPVRGFARNLGVAFQILNDLGDWKGDADNK 443
>gi|13929206|ref|NP_114028.1| farnesyl pyrophosphate synthase [Rattus norvegicus]
gi|204092|gb|AAA41143.1| farnesyl pyrophosphate synthetase [Rattus norvegicus]
gi|37590777|gb|AAH59125.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase)
[Rattus norvegicus]
gi|149048093|gb|EDM00669.1| rCG62519, isoform CRA_a [Rattus norvegicus]
Length = 353
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 71/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L H + R+ + Y +GGK R
Sbjct: 1 MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHI 109
V + +L+ + + MD+ + RRG+ +
Sbjct: 61 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSHTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 121 KPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc kimchii IMSNU 11154]
gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc kimchii IMSNU 11154]
Length = 332
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 9/214 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
L +L + +S + + AIR L GK +R L + L + ++ + A
Sbjct: 20 LQSILTEMSSSWHIGF-EEIDHAIRSQLNAGKLVRPALTLIFSRLTSESYNQSAISLGAS 78
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + +D +RRG ++ Q+ + TA+ AG+ LLT F ++
Sbjct: 79 VELLHLATLI-HDDIIDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAA 137
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + + LQ + + + K KT AL + G +
Sbjct: 138 NKLALTALQEILFGELLQKQNRYNIDTTFSAYFSQ------IKGKTAALFKLSATFGLVS 191
Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S + GEN+GI FQL DD LD E
Sbjct: 192 GTDYSDELFSTVSHLGENIGITFQLLDDYLDFES 225
>gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 376
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 32/249 (12%)
Query: 15 RIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALL--------GGKKIRSFLVTECASLF 65
I+T + +L+ T L + + ++ GGK++R+ L + +
Sbjct: 19 AIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLDAYDVL 78
Query: 66 NVNHLTAL---------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ AIE +L+HDDL + + + A
Sbjct: 79 AGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDLIDDSDLRRGKPSAHCALT-SFAGA 137
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QML 165
G GL +++++ T + ++ + ++ M + +
Sbjct: 138 RSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLSMQHDVEVGQVLDLAIERM 197
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGIIFQL 223
+ D + + KT + A A +A +E L G LG FQL
Sbjct: 198 PLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAIGLPLGQAFQL 257
Query: 224 ADDLLDCEE 232
ADDLLD
Sbjct: 258 ADDLLDVTG 266
>gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
gracilis RM3268]
gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
gracilis RM3268]
Length = 330
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 86/252 (34%), Gaps = 50/252 (19%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+ID I+ + ++ DRL GKK+RS L+ A + +
Sbjct: 2 QDQIDLIMKSFIADCGYEPASEMFDRL--------SPGKKLRSKLLLNIAR---KDEKSL 50
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L +D +RRGKP+++ Y A++ G+ L + A+ +S
Sbjct: 51 RLCAIIELIQAASLL---HDDVIDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFELS 107
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
++++ + + + + D ++ + +KT AL+
Sbjct: 108 KFESRIAAALSLAVTKLAVGELMDVSLSDD-------FNDDASKYLQMIYLKTSALIEEV 160
Query: 193 CESGAIMAHASQNEK-----------------------------ERLRCFGENLGIIFQL 223
GA + S + + +G+NLG+ FQ+
Sbjct: 161 ARCGAFLKFGSAENRGEISDMSGKKNEGEIPSAAKDHNKISSASAKFGKYGKNLGLAFQI 220
Query: 224 ADDLLDCEEDLP 235
DD+LD +
Sbjct: 221 IDDILDVTQSSE 232
>gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
20098]
gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
20098]
Length = 359
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 23/246 (9%)
Query: 10 QENSKRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTEC 61
+ I++ + L+ + + M + + R A GGK++R+ L+
Sbjct: 5 DADRSNIESRIVSLVDKWSAMPMEAEMPEACRHVVDAVSRQATSSSEGGKRLRALLMLAA 64
Query: 62 ASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
F+ + T + A+E +L+HDD+ + + ++ D + I
Sbjct: 65 YDAFDGHADTRNAMLDVACALEVFQTAALVHDDIIDDSDLRRGKPSAHRALETDTGSPAI 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDET 175
L + + + + L+ + + GQ+LD+ E
Sbjct: 125 GRGLGLMLGDLLATVCIDIVNEAAALLPHATALTSAFLNMQREVEIGQILDLAVEQAPLQ 184
Query: 176 QVFMIQ--------KMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADD 226
+ E + + A+ + +ER G+ LG+ FQL DD
Sbjct: 185 DAEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQARERALAIGKPLGLAFQLEDD 244
Query: 227 LLDCEE 232
L+D
Sbjct: 245 LIDVIG 250
>gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis CCUG 52486]
gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 366
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 11 ANNREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDA 70
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRG+P+ H ++ +
Sbjct: 71 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSG 130
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 131 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 190
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 191 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 250
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 251 DDLLDVVG 258
>gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
43021]
gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
43021]
Length = 322
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 66/202 (32%), Gaps = 10/202 (4%)
Query: 30 HMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ + + + +R G GK +R L+ A +H +R+GA +E IH SL+
Sbjct: 27 RLADGLPEPVRAPVRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLGALVELIHLASLL 86
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+ + + + T+ D
Sbjct: 87 HDDVIDEA---------ETRRGAPAAHTAVGTEQAMLAGLACFALVGTEAADLGEGVAGA 137
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L + D + + KT L C GA A + E +
Sbjct: 138 VSMAVAKLAYGELLDVERAFDTAFPLPAYLELVQSKTAELFRLCCLLGAAEARSGHGEAD 197
Query: 209 RLRCFGENLGIIFQLADDLLDC 230
L FG LG+ FQ+ DD LD
Sbjct: 198 ALVRFGTALGVTFQILDDCLDL 219
>gi|241620359|ref|XP_002408650.1| polyprenyl synthetase, putative [Ixodes scapularis]
gi|215503009|gb|EEC12503.1| polyprenyl synthetase, putative [Ixodes scapularis]
Length = 355
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 6/205 (2%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL--PS 94
+ A Y L GGK+ R V L + L + + + +
Sbjct: 50 EAFREAAEYNLPGGKRNRLLAVVHAYELLAEESVPHLELACVLGWCVEMLQSYFLILDDI 109
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
MD +RRG+P+ + I L A + + L ++
Sbjct: 110 MDGSPVRRGRPSWYTVPGVGLRAINDALFLEKAVLWVVRRRLGHLRCYLPLSELFQESDL 169
Query: 155 GL---QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERL 210
QG+ D + ++ +G ++A +
Sbjct: 170 RTVLGQGLDMLSQKSTLDALRADRYWAIVTYKTAFYSFVLPVRAGMLLAGVEDPGLHAQA 229
Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
+ LG +FQ+ DD +DC D
Sbjct: 230 QQAALQLGRVFQVQDDYIDCFGDPE 254
>gi|209525924|ref|ZP_03274458.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
gi|209493601|gb|EDZ93922.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
Length = 132
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S E L +G N+G+ FQ+ DD+LD
Sbjct: 2 SAELAEDLYKYGRNIGLAFQIVDDILDFTGSTE 34
>gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 264
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 22/217 (10%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECAS 63
+Q I+ ++ L + + + + + + L
Sbjct: 1 MQPYWAAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACE 53
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + A+ AAI +H + +H+ LP + G
Sbjct: 54 LVGGDRSQAMAAAAAIHLVHAAAYVHEHLPPAIQHKYGPNVELLTGDGIVPFGFELLAGS 113
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
P + ++++ ++ G +GM+ G + + + + +
Sbjct: 114 --------VDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVC 165
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
K K G + GAI+ A++ E ++LR FG G
Sbjct: 166 KKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 202
>gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
14672]
Length = 384
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 80/243 (32%), Gaps = 24/243 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------------GGKKIRSF 56
L+ +D L L L Y GK IR
Sbjct: 98 LERARAEVDPALRAALGSL--------PGPLRRIALYHFGWEHADGTSAEEGSGKAIRPA 149
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV AS + V AA ++ MD RR +PT + + A
Sbjct: 150 LVLAAASALGGSEARRAAVRAAAAVELVHNFTLLHDDVMDRDTTRRHRPTAWTVFGDADA 209
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I+AG+ L A +++ ++L + Q M + +
Sbjct: 210 ILAGDALQALALGLLAEDPHPAAPAAAARLAHCVVELCAGQH-TDTAMERRGPGEVTLAE 268
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
+ + KTGAL+ AC GA+ A A + L FG G+ FQL DD++ D
Sbjct: 269 TLTMAEAKTGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGDPRR 328
Query: 234 LPK 236
K
Sbjct: 329 TGK 331
>gi|21955860|emb|CAD42869.1| farnesyl pyrophosphate synthase [Mucor circinelloides f.
lusitanicus]
Length = 352
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 69/235 (29%), Gaps = 12/235 (5%)
Query: 10 QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
Q K T+ D++LL+ + M + + Y + GGK R V + + +
Sbjct: 13 QAFLKVFPTLADEVLLELRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVDTVRILKGD 72
Query: 69 HLTALRV--GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+T + + + + + + E ++A N
Sbjct: 73 AVTEDDIFKATVLGWLIEFLQAFFLVSDDIMDASITRRGQPCWYKSEGVGMVAINDAFIL 132
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQVF 178
I K K ++ L H + Q + + +F + F
Sbjct: 133 ESCIYIFLKKYFKKTDYYIELVELFHEVTFQTELGQLCDLITAPEDDVDLSKFSIKKHQF 192
Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ M ++ ++ LG FQ+ DD LDC
Sbjct: 193 IVIYKTAYYSFYLPVALAMHMVGIKNEEAFKQSHDILIPLGEYFQVQDDYLDCYG 247
>gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171]
Length = 157
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
KT L +C SGA + AS+ + G LG+ FQ+ DD+LD D
Sbjct: 3 ISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 58
>gi|227875512|ref|ZP_03993652.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
35243]
gi|306818821|ref|ZP_07452543.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
gi|227843848|gb|EEJ54017.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
35243]
gi|304648507|gb|EFM45810.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 60/211 (28%), Gaps = 21/211 (9%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALR---------------VGAAIECIHCYSLIHD 90
LL GK+ R+ + + I + I
Sbjct: 46 LLLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDIIDEARIRR 105
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAII------AGNGLLTYAFEIISSPKTQLKDNIRS 144
LPS ++ + + A N A + + S + Q +
Sbjct: 106 GLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGLDSARLQALGQLYV 165
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + + L + L E+ + +I+ + GA +A A+
Sbjct: 166 TMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALAGATP 225
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +L F LGI +QL DD L
Sbjct: 226 DLLAKLEDFSTPLGIAYQLRDDDLGIFGSQE 256
>gi|67902050|ref|XP_681281.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4]
gi|40740444|gb|EAA59634.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4]
gi|259480763|tpe|CBF73703.1| TPA: polyprenyl synthetase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 347
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 69/241 (28%), Gaps = 20/241 (8%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA----- 62
+ + L H + + AI + GGK R V +
Sbjct: 7 RAAFEAVFPSLAEAMLDHARKYNLPQNAQEWFSKAIHTNVPGGKLNRGLSVPDTGVALLQ 66
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + +G E + + L+ DDL MD RRG+P + I
Sbjct: 67 KELSEEQYKDLATLGWLTELLQAFFLVSDDL--MDGSITRRGQPCWYRHQGVGLIAINDA 124
Query: 122 GLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
LL +I ++ +L T L + ++ +
Sbjct: 125 FLLESGIYVILKKQFRSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLNNFSMEK 184
Query: 180 IQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ T ++ +A A+ + LG FQ+ DD LD D
Sbjct: 185 YMFIVTYKTAYYSFYLPVALALHYLQLATPENLRQAHDILIPLGQYFQVQDDYLDAYGDP 244
Query: 235 P 235
Sbjct: 245 E 245
>gi|151944962|gb|EDN63217.1| FPP synthetase [Saccharomyces cerevisiae YJM789]
Length = 352
Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 15/230 (6%)
Query: 18 TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN------HL 70
++++L ++ M + D ++ Y GGK R V + ++ +
Sbjct: 18 KLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSKKTVEQLGQE 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+V CI M + I R + EV I + + A
Sbjct: 78 EYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIY 137
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKM 183
+ + + + +F + F++
Sbjct: 138 KLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFK 197
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + ++ R LG FQ+ DD LDC
Sbjct: 198 TAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 247
>gi|71390084|ref|XP_802181.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70858312|gb|EAN80735.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 173
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQL 223
+ D D KT +L+ + S A++A + +E FG++LGI FQ+
Sbjct: 4 MMQMDGCFDIESYEQKSYCKTASLIANSLASTAVLAGFPNTAYEEAAAKFGKHLGIAFQI 63
Query: 224 ADDLLDCEED---LPK 236
DD LD D L K
Sbjct: 64 VDDCLDITGDDKNLGK 79
>gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine
bacterium HF10_25F10]
Length = 341
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 10/215 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
I+ D +L+ M +A+ + GK +R+ + A L V+ AL A
Sbjct: 27 EIIHDFILE---RMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAALHWAA 83
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
AIE +H SL+HDD+ D +RRG+P V ++ A+ G+ L+ +FE+ + +
Sbjct: 84 AIEVLHNASLVHDDIC--DGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAAEAAQR 141
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + +++ + + + D A + + A
Sbjct: 142 AQTPMLLKILATHMKTTTVGEAHEFDPAPVTDWDHYLQGAGDKTAPLLTAPLEG-IAAMA 200
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ A+ R LG +Q+ +D+L+
Sbjct: 201 LHGGAAPTIGACFRS----LGNAYQIGNDILNFSG 231
>gi|154317914|ref|XP_001558276.1| hypothetical protein BC1G_02940 [Botryotinia fuckeliana B05.10]
gi|77540231|gb|ABA86970.1| farnesyl diphosphate synthase [Botryotinia fuckeliana]
gi|150843598|gb|EDN18791.1| hypothetical protein BC1G_02940 [Botryotinia fuckeliana B05.10]
Length = 347
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 85/241 (35%), Gaps = 16/241 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
+ L+E ++DDLL + + Q D L +++ +GGK R V
Sbjct: 4 ATTLKEFESVFPKLVDDLLAHAQKYNLPQQGQDWLKASLNANTIGGKCNRGMSVPDSVSL 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + + +G E + + L+ DD+ MD+ RRG+P + Q I
Sbjct: 64 LLEAPLSEEQYFESATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQPGVGMIAI 121
Query: 119 AGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
LL A + ++ +L +T+ L + +D
Sbjct: 122 NDAFLLEAAIYSLLKKYFRSHPSYLDLIELFHEVTYQTELGQLCDLLTAPEDKVDLDNFS 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + T ++ +A A+ +++ LG FQ+ DD LD
Sbjct: 182 MTKYDFIVTYKTAYYSFYLPVALALHHQKIATPKNLKQVEDILIPLGQYFQIQDDYLDNF 241
Query: 232 E 232
Sbjct: 242 G 242
>gi|120478|sp|P05369|FPPS_RAT RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Cholesterol-regulated 39 kDa
protein; Short=CR 39; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
Length = 353
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 71/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L H + R+ + Y +GGK R
Sbjct: 1 MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHI 109
V + +L+ + + MD+ Y RRG+ +
Sbjct: 61 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 121 KPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 181 GQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQ 240
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 241 IQDDYLDLFGDPSVTGK 257
>gi|255724742|ref|XP_002547300.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
gi|240135191|gb|EER34745.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
Length = 351
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 10 QENSKRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+R ++ DD + + M + D + + Y GGK R V + ++
Sbjct: 5 AAARERFISVFDDAVEELKEVLVSYKMPQEAIDWFVKNLNYNTPGGKLNRGLSVVDTFAI 64
Query: 65 FN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
N +N +V I M + R + V I
Sbjct: 65 LNNTTADKLNDEQYKKVALLGWAIELLQAYFLVADDMMDQSKTRRGQKCWYLVEGVGNIA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEF 171
+ + + K +D L+ + + + D+F
Sbjct: 125 INDSFMLEGAIYVLLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLVTADEEVVDLDKF 184
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ F++ M+ S+ + +++R LG FQ+ DD LDC
Sbjct: 185 SLDKHSFIVIFKTAYYSFYLPVALAMYMSGINSEEDLKQVRDILIPLGEYFQIQDDFLDC 244
Query: 231 EE 232
Sbjct: 245 FG 246
>gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519]
gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii]
Length = 311
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 12/224 (5%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
L+ + L ++L +T ++ + L ++ GK +R + AS N
Sbjct: 3 SLESAKNEFNNKLVEVLRKTPPSIR-ECTSYLSKSL------GKNLRGNCILIVASDENQ 55
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + +D+ RRG ++ ++D+ TA+I G+ +L A
Sbjct: 56 FVHEDAINLAVAIELFHLATLV-HDDIIDDSPKRRGMDSLQSRFDKKTAVICGDYILAMA 114
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
E+ + + S + + +G Q ++ + + + I + KT A
Sbjct: 115 IELALKVDIKDEYKKYSLANYAKSVCLGELM----QDTNLFNYNLSLKRYLTIIRGKTAA 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
L A SGAI+ ++ + + G +G+IFQ++DD +D E
Sbjct: 171 LFEAAFVSGAIVLGEPKSNVDLYKNIGRYIGMIFQMSDDCMDYE 214
>gi|149048094|gb|EDM00670.1| rCG62519, isoform CRA_b [Rattus norvegicus]
Length = 420
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 71/257 (27%), Gaps = 21/257 (8%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L H + R+ + Y +GGK R
Sbjct: 68 MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 127
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHI 109
V + +L+ + + MD+ + RRG+ +
Sbjct: 128 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSHTRRGQICWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 188 KPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 248 GQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQ 307
Query: 223 LADDLLDCEED---LPK 236
+ DD LD D K
Sbjct: 308 IQDDYLDLFGDPSVTGK 324
>gi|260945739|ref|XP_002617167.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849021|gb|EEQ38485.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 374
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 16/229 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA------SLFNVNHLT 71
L ++L+Q +M + D + Y GGK R V + SL +++
Sbjct: 43 QELKEILVQY--NMPQEAIDWFTKNLNYNTPGGKLNRGLSVIDTYCILKNKSLADLSQEE 100
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+V I M + R + V I + + +
Sbjct: 101 YKKVAILGWAIELLQAYFLVADDMMDQSKTRRGQPCWYLVEGVGNIAINDSFMLEGAIYV 160
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMK 184
K +D L+ + + D+F F++
Sbjct: 161 LLKKHFRQDPYYVDLLDLFHEVTFQTELGQLLDLVTADEEHVDLDKFSLAKHSFIVIFKT 220
Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M S+ + +++R LG FQ+ DD LDC
Sbjct: 221 AYYSFYLPVALAMFMCGINSEQDLKQVRDILIPLGEYFQIQDDYLDCFG 269
>gi|322499090|emb|CBZ34162.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 362
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 71/252 (28%), Gaps = 31/252 (12%)
Query: 11 ENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +++ + + L + M L S + LGGK R V + A
Sbjct: 5 ERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MD+ RRGKP ++ T +
Sbjct: 65 DTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--------------- 163
+GL+ A+ + ++++ +
Sbjct: 125 INDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANV 184
Query: 164 ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGI 219
E+ ++ G +++ + +KE +G
Sbjct: 185 AHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGE 244
Query: 220 IFQLADDLLDCE 231
FQ+ DD++DC
Sbjct: 245 YFQVQDDVMDCF 256
>gi|195029339|ref|XP_001987531.1| GH19915 [Drosophila grimshawi]
gi|193903531|gb|EDW02398.1| GH19915 [Drosophila grimshawi]
Length = 413
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 62/227 (27%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ DL T ++ ++Y + GKK R L + ++
Sbjct: 87 DVVRDLTNATKAYNCRDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPADQLTPENIK 146
Query: 75 VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + MDN RRG+ H+ + I ++ A I
Sbjct: 147 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQKCWHMVENVGLNAINDALMIENAMYAIL 206
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
D + + L + EF + +++
Sbjct: 207 KQHFSHLDCYVALMELFHEITYITTCGQSLDLLNSNKSVSEFSMDNYKAIVENKTAYYSF 266
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 267 YLPFAIAMHLAGYKDPEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 313
>gi|37528167|ref|NP_931512.1| hypothetical protein plu4337 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787604|emb|CAE16709.1| crtE [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 300
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
L E + L+ +L A +D++ +A+R + L+ GK+IR L+
Sbjct: 12 EETLLELQSALQQHLELVLPSGAP------DDKVCAAMRESTLVSGKRIRPLLLLLIVLD 65
Query: 65 FNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N ++ +AIE +H SLI DDLP MDN RRG+P +H QY E AI+A
Sbjct: 66 LGENPWKTDFLQLASAIEIVHAASLILDDLPCMDNAEYRRGRPAIHRQYGESVAILAAVA 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
LL+ AF +I D + +LS T + + L+ + +
Sbjct: 126 LLSRAFGLIVETNLSEYDKSAAVAILSHTVGLNGLVQGQFRDLNNTLCAGNYHAIATTND 185
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+KTG L + AI +A ++ LR ++LG FQ
Sbjct: 186 LKTGLLFDTTFQLAAIAVNAPDIIRQALRHVSQHLGQAFQ 225
>gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
Length = 404
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 75/245 (30%), Gaps = 19/245 (7%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
+ + ++ D + + S +D + GG +IRS +
Sbjct: 36 EAVTSELERCCADFVAHSLSLDPVFSHDVAERLAAFTCDGGSRIRSRFLWWALRACGGTD 95
Query: 70 LTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------Q 110
RV AA+E I +LIHDD+ + I
Sbjct: 96 AHTPGALRVAAALELIQSCALIHDDVMDQSAVRRGKPSFHTQIALQYSRTTAARQPGLSP 155
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ + A++AG+ L++A ++++ + + + G
Sbjct: 156 FPQAAAVLAGDLALSWADDLVAEADLDPPVRTEALRIWRAMRTEMIAGQYLDLHGQATSS 215
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + GA +A A L G GI FQL DDLL
Sbjct: 216 RSAVQAIRTVCLKAARYTVEQPLALGAALAGADDANTRALTAAGRCAGIAFQLRDDLLGV 275
Query: 231 EEDLP 235
+D
Sbjct: 276 FDDPA 280
>gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 122
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
L + + + + +L L+ + Q L +RYA L GGK++R LV
Sbjct: 3 TNELKTWQAQAQAQTELLLARLMPS-----ENQLPQSLHETMRYAALDGGKRLRPLLVLA 57
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ L AAIE IH YSL+HDD+P+MDN +RRG+PT HI+Y E
Sbjct: 58 ASELGEAVPDAVEAAMAAIELIHVYSLVHDDMPAMDNDSLRRGRPTCHIRYGE 110
>gi|123469801|ref|XP_001318110.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
gi|121900861|gb|EAY05887.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
Length = 338
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 13/236 (5%)
Query: 9 LQENSKRI----DTILDDLLLQTASHMQTQHND-RLLSAIRYALLGGKKIRSFL-VTECA 62
++E+ + D IL + + + + Q + Y + GGK +R L V
Sbjct: 1 MEESKAKFFEFKDKIL-EFIDEISLEWPDQKQQQHFHDLVDYTIAGGKCLRGLLSVFGFL 59
Query: 63 SLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + + + MD +RR KP + + ++
Sbjct: 60 ELTGYSPDSKEAEAAYALGWVQEILQASFLVADDLMDKSPLRRDKPCWYCLQENKYTAVS 119
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
+ L +I + L H L+ LG + + E +
Sbjct: 120 DSYFLENVLYMIIDKYFADFPVEVVLEIKHLLHITTLRTALGQYIDMHKKEPTIDNWTLT 179
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEE 232
+ + SG + + E + G++FQ DD LD
Sbjct: 180 VTNKTAYYTIWQPFLSGIVASQKIPAEVWQSKPFEDALIKAGVLFQCQDDWLDQYG 235
>gi|6322294|ref|NP_012368.1| Erg20p [Saccharomyces cerevisiae S288c]
gi|120479|sp|P08524|FPPS_YEAST RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|171517|gb|AAA34606.1| farnesyl diphosphate synthetase (EC 2.5.1.1) [Saccharomyces
cerevisiae]
gi|1008358|emb|CAA89462.1| ERG20 [Saccharomyces cerevisiae]
gi|190409344|gb|EDV12609.1| farnesyl diphosphate synthetase [Saccharomyces cerevisiae RM11-1a]
gi|207344136|gb|EDZ71372.1| YJL167Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271340|gb|EEU06405.1| Erg20p [Saccharomyces cerevisiae JAY291]
gi|285812738|tpg|DAA08636.1| TPA: Erg20p [Saccharomyces cerevisiae S288c]
gi|290771068|emb|CAY80618.2| Erg20p [Saccharomyces cerevisiae EC1118]
gi|323332955|gb|EGA74357.1| Erg20p [Saccharomyces cerevisiae AWRI796]
gi|323337022|gb|EGA78278.1| Erg20p [Saccharomyces cerevisiae Vin13]
gi|323348011|gb|EGA82269.1| Erg20p [Saccharomyces cerevisiae Lalvin QA23]
Length = 352
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 15/230 (6%)
Query: 18 TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN------HL 70
++++L ++ M + D ++ Y GGK R V + ++ +
Sbjct: 18 KLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQE 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+V CI M + I R + EV I + + A
Sbjct: 78 EYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIY 137
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKM 183
+ + + + +F + F++
Sbjct: 138 KLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFK 197
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + ++ R LG FQ+ DD LDC
Sbjct: 198 TAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 247
>gi|332020708|gb|EGI61113.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 362
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 78/231 (33%), Gaps = 17/231 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTE------CASLFNVNHL 70
++ DL T + + + ++Y + GGKKIR+ LV L N
Sbjct: 34 DVVRDLTDSTKNFIIPDIAKWMAKVLQYNVPGGKKIRALALVYAYKVLAPSDQLTEENIR 93
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ +E + + L+ DD+ D IRRG+P + D A + + LL A
Sbjct: 94 LVRILAWCVELMQAFLLVIDDIQ--DRSLIRRGQPCWYRYNDLGLAAVNDSLLLENAIFY 151
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT----- 185
+ + KD + L + ML + +F + + +
Sbjct: 152 LIKKYFKGKDCYVTLLETFHDTILKTIIGQSLDMLSTNFGKKPDLDMFTMNRYNSIVEYK 211
Query: 186 --GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+A + + +G +FQ+ DD L C D
Sbjct: 212 TSHYSFILPITIAMHLAGIKDPEMFRQAKTILLEMGHLFQVQDDYLGCYSD 262
>gi|323308567|gb|EGA61811.1| Erg20p [Saccharomyces cerevisiae FostersO]
Length = 352
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 15/230 (6%)
Query: 18 TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN------HL 70
++++L ++ M + D ++ Y GGK R V + ++ +
Sbjct: 18 KLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQE 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+V CI M + I R + EV I + + A
Sbjct: 78 EYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIY 137
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKM 183
+ + + + +F + F++
Sbjct: 138 KLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFK 197
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + ++ R LG FQ+ DD LDC
Sbjct: 198 TAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 247
>gi|323304418|gb|EGA58189.1| Erg20p [Saccharomyces cerevisiae FostersB]
Length = 352
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 15/230 (6%)
Query: 18 TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN------HL 70
++++L ++ M + D ++ Y GGK R V + ++ +
Sbjct: 18 KLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQE 77
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+V CI M + I R + EV I + + A
Sbjct: 78 EYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIY 137
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKM 183
+ + + + +F + F++
Sbjct: 138 KLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFK 197
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + ++ R LG FQ+ DD LDC
Sbjct: 198 TAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 247
>gi|112363472|gb|ABI16061.1| farnesyl pyrophosphate synthase [Leishmania donovani]
Length = 362
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 71/252 (28%), Gaps = 31/252 (12%)
Query: 11 ENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +++ + + L + M L S + LGGK R V + A
Sbjct: 5 ERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MD+ RRGKP ++ T +
Sbjct: 65 DTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--------------- 163
+GL+ A+ + ++++ +
Sbjct: 125 INDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANV 184
Query: 164 ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGI 219
E+ ++ G +++ + +KE +G
Sbjct: 185 AHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGE 244
Query: 220 IFQLADDLLDCE 231
FQ+ DD++DC
Sbjct: 245 YFQVQDDVMDCF 256
>gi|29124957|gb|AAO63552.1| putative farnesyl pyrophosphate synthase [Plasmodium falciparum]
Length = 362
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 64/253 (25%), Gaps = 35/253 (13%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ I D +L + +++ L Y LGGK R LV +
Sbjct: 29 INHINDYVLEDDIKIIISKYYKLLFD---YNCLGGKNNRGILVILIYEYVKNRDINCNEW 85
Query: 76 ------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
IE + L+ DD+ + + + A+ L ++
Sbjct: 86 EKVACIAWCIEILQASFLVADDIMDKGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYK 145
Query: 130 IISSPKTQLKDNIRS------------------------QLMLSLTHNIGLQGMLGGQML 165
++ + + + +
Sbjct: 146 LLDVYLRNDNCYLDLITSFREATLKTIVGQHLDTNIFSDKYSHIDKDIDVNNINISQENK 205
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQL 223
+ + +I G M S + +++ +G FQ+
Sbjct: 206 ININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEYFQV 265
Query: 224 ADDLLDCEEDLPK 236
DD +D D K
Sbjct: 266 HDDYIDTFGDSKK 278
>gi|209408510|emb|CAR64517.1| geranyltranstransferase [Gilbertella persicaria]
Length = 350
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 63/224 (28%), Gaps = 12/224 (5%)
Query: 21 DDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA- 78
D++L + + M + + Y + GGK R V + + +T + A
Sbjct: 22 DEILAEVRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVDTVRILKGESVTEDDIFKAT 81
Query: 79 ---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ MD RRG+P + I +L I
Sbjct: 82 VLGWLVEFLQAFFLVSDDIMDASITRRGQPCWYKADGVGMVAINDAFILEACIYIFLKKY 141
Query: 136 TQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ D + L + + + +F + F++
Sbjct: 142 FKKTDYYIELVELFQEVTFQTELGQLCDLITAPEDNVDLSKFSVKKHQFIVIYKTAYYSF 201
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
M ++ ++ LG FQ+ DD LDC
Sbjct: 202 YLPVALAMHMVGVKNEEAFKQAHDILIPLGEYFQVQDDYLDCYG 245
>gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative
[Leuconostoc argentinum KCTC 3773]
Length = 324
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 8/197 (4%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+ + +AIR L GK +R L + L + A + + + +D
Sbjct: 28 EDIDTAIRSQLNAGKLVRPALTLIFSKLTTTPYNQQAIQLGASVELLHLATLI-HDDIID 86
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+RRG ++ ++ + TA+ AG+ LLT F ++ + + + + +
Sbjct: 87 ESKLRRGYESIQSRFGKDTAVYAGDYLLTGMFSLLEQTSLPQANQLALTALQDILFGELV 146
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGE 215
Q + K KT AL + G I A + + ++ + GE
Sbjct: 147 QK------HHRFNVDATFDTYLSQIKGKTAALFKLSVTFGLISGQAIADDLQDTVSQLGE 200
Query: 216 NLGIIFQLADDLLDCEE 232
NLGI FQL DD LD E
Sbjct: 201 NLGITFQLLDDYLDFES 217
>gi|282935089|gb|ACT79809.3| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
Length = 394
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDIPDVTKWLAKVLQYNVPGGKKNRGLALVLSFKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLRLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I + Q + + + +++
Sbjct: 170 NDGILLEQTIYQLIKKYFKDKPYYVHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EEDLP 235
D
Sbjct: 290 YGDPE 294
>gi|258597332|ref|XP_001347966.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
3D7]
gi|254832668|gb|AAN35879.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
3D7]
Length = 376
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 64/253 (25%), Gaps = 35/253 (13%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I+ I D +L + +++ L Y LGGK R LV +
Sbjct: 29 INHINDYVLEDDIKIIISKYYKLLFD---YNCLGGKNNRGILVILIYEYVKNRDINCNEW 85
Query: 76 ------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
IE + L+ DD+ + + + A+ L ++
Sbjct: 86 EKVACIAWCIEILQASFLVADDIMDKGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYK 145
Query: 130 IISSPKTQLKDNIRS------------------------QLMLSLTHNIGLQGMLGGQML 165
++ + + + +
Sbjct: 146 LLDVYLRNDNCYLDLITSFREATLKTIVGQHLDTNIFSDKYSHIDKDIDVNNINISQENK 205
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQL 223
+ + +I G M S + +++ +G FQ+
Sbjct: 206 ININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEYFQV 265
Query: 224 ADDLLDCEEDLPK 236
DD +D D K
Sbjct: 266 HDDYIDTFGDSKK 278
>gi|146100853|ref|XP_001468963.1| farnesyl pyrophosphate synthase [Leishmania infantum]
gi|321399468|emb|CBZ08669.1| farnesyl pyrophosphate synthase [Leishmania infantum JPCM5]
Length = 362
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 71/252 (28%), Gaps = 31/252 (12%)
Query: 11 ENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +++ + + L + M L S + LGGK R V + A
Sbjct: 5 ERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MD+ RRGKP ++ T +
Sbjct: 65 DTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--------------- 163
+GL+ A+ + ++++ +
Sbjct: 125 INDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDANV 184
Query: 164 ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGI 219
E+ ++ G +++ + +KE +G
Sbjct: 185 AHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVAMVMGE 244
Query: 220 IFQLADDLLDCE 231
FQ+ DD++DC
Sbjct: 245 YFQVQDDVMDCF 256
>gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 766
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 15/220 (6%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ + + + + + + + L G+ R ++ L + + A E +H
Sbjct: 428 TDLDTAARIRLHQAVAAPVLHLLDNPGRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLH 487
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+L+ DD+ DN RRG+P+VH + AI AG +I Q D
Sbjct: 488 VSALVIDDIQ--DNSPTRRGRPSVHEIFGTAPAITAGTLGYYTFDALI-QRVPQADDGTM 544
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMCFA 192
++ ++ L D+ Q+ ++KTG L+
Sbjct: 545 LRIYRLYLRDLRAAHAGQALDLAGHHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRST 604
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E AI+ A + + + + + E +GI +Q+ DD+ D
Sbjct: 605 AEVSAILGGADETQLDAICAYFEAVGIAYQITDDVFDLYG 644
>gi|73671769|gb|AAZ80290.1| farnesyl diphosphate synthase [Vibrio sp. JL-73]
Length = 147
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLM 147
HDDLP MD+ +RRG+ T HI +DE +AI+AG+ L T AF I++ K + + R ++
Sbjct: 1 HDDLPGMDDDSLRRGQATCHIAFDEASAILAGDALQTLAFGILAEGKLSAEGDIYRIHMV 60
Query: 148 LSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ- 204
L G GM GQ L + + +D + I + KTGAL+ A GA A
Sbjct: 61 KELAAASGAMGMCLGQALDLAAEGKRVDLEALETIHRNKTGALIRCAVRLGAYAAGEKGV 120
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
+RL F +G+ FQ+ DD+LD E
Sbjct: 121 ACLKRLDTFSNAIGLAFQVQDDILDVE 147
>gi|294955858|ref|XP_002788715.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239904256|gb|EER20511.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 365
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 56/207 (27%), Gaps = 14/207 (6%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD-DLPSMDNGYIR 101
+ Y LGGK R + ++ AAI + + +
Sbjct: 87 MNYNCLGGKMTRGLTTVATYVALCGDSCEHVKDAAAIGWSAEFLQASFLMFDDVMDQSET 146
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
R T + E++ + N ++ + + + +L + + +
Sbjct: 147 RRGSTCWYRLPEISMPNSLNDVVFIENAVYTLLIESTGFDADIKLAIIRLCHDITLRTII 206
Query: 162 GQMLDIQD-----------EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKE 208
GQ LD+ + E G MA + +
Sbjct: 207 GQHLDLNSVRPDDYTVDLSRYTMERYWATTAYKTAYYSFWLPVALGMAMARFPLDDPDYK 266
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+ LG FQ DD LD D
Sbjct: 267 GTKDACILLGNFFQAQDDFLDVFGDPE 293
>gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein
[Desulfitobacterium hafniense DCB-2]
gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfitobacterium hafniense DCB-2]
Length = 318
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 11/178 (6%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + AL +E I DD+ DN + + +
Sbjct: 49 LTRMSCECAGGDPEDALPGAIGMEFFALALDIFDDVQDQDNENMPWRQLPDAQAINLAIC 108
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ + + R I + + + + Q
Sbjct: 109 LLMLSDE--------AISAIPDNRLFREVAATLHRTGICASNGQFREFIYDDRQQVSFEQ 160
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL---LDCE 231
F + K G+L AC+ GAI+ A + L FG NLGI+ Q+ +DL LD
Sbjct: 161 YFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLNDFLDFF 218
>gi|157136626|ref|XP_001663796.1| farnesyl-pyrophosphate synthetase [Aedes aegypti]
gi|108880982|gb|EAT45207.1| farnesyl-pyrophosphate synthetase [Aedes aegypti]
Length = 430
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 58/239 (24%), Gaps = 9/239 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
S +E ++ DL + T + A++Y + GKK R +
Sbjct: 92 KSDAREFMAVFPDLVRDLTEYCKKYDNTLAPKWFVKALQYNVPQGKKNRGLAAVLAYRML 151
Query: 66 NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + +R + + + + + E + N
Sbjct: 152 SKSEDLTPENIRRAHYLGWVIEMFQAVFLICDDAMDGSQTRRGQPCWYKLEDVKLSGIND 211
Query: 123 LLTYAFEIISSPKTQLKDNIRS-----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L I K Q D Q + ++ +
Sbjct: 212 ALMIDAAIFYVLKKQFGDEPYYSKLVETFNEIKFITTIGQSLDLRSARMDVTKYTMDLYK 271
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ M + + +G+ +Q DD LDC D
Sbjct: 272 SIVCHKTAYYTFYLPVALAMHMTGFTDPEVFRQTKTILLEIGLFYQTQDDFLDCFGDPA 330
>gi|224156665|ref|XP_002200183.1| PREDICTED: farnesyl diphosphate synthase (farnesyl pyrophosphate
synthetase, dimethylallyltranstransferase,
geranyltranstransferase) [Taeniopygia guttata]
Length = 366
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 67/267 (25%), Gaps = 33/267 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
MNG + E + I+ DL H + RL + Y GGK R V
Sbjct: 1 MNGAAAER-DEFAAFFPQIVRDLTEDMLGHPEVGDAVARLKQVLEYNAPGGKCNRGLTVV 59
Query: 60 ECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L +LR A+ + + + E +
Sbjct: 60 AAFRRLAERQEPESLRCALAVGWCIELFQAFFLVADDIMDASLTRRGQLCWYKKEGIGLD 119
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
A N + + +L L ++ ++D + +
Sbjct: 120 AINDAFLLESSVYRLLRRYCGQQPYYLHLLELFLQFQAFFLVADDIMDASLTRRGQLCWY 179
Query: 179 -----------------------------MIQKMKTGALMCFACESGAIMAHAS-QNEKE 208
+++ + MA + E E
Sbjct: 180 KKEGIGLDAINDAFLLESSVYRLLRRYKAIVKYKTAFYSFYLPVAAAMYMAGIDSKEEHE 239
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +G FQ+ DD LDC D
Sbjct: 240 NAKAILLEMGEFFQIQDDFLDCYGDPA 266
>gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
9941]
Length = 304
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
K+KT L AC +G + S + + L +G+ LG+ FQ++DD++D
Sbjct: 145 DYLEHIKLKTAGLFRAACVAGGTLGGLSLPQIDALATYGQALGLAFQMSDDVMDLVGKPG 204
>gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
Length = 443
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231
MKT +LM + + + E E +G NLGI FQL DD+LD E
Sbjct: 282 WNLYLQKTYMKTASLMAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDYE 341
Query: 232 -ED--LPK 236
D L K
Sbjct: 342 VSDATLGK 349
>gi|297563839|ref|YP_003682812.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848288|gb|ADH70306.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 768
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 84/219 (38%), Gaps = 13/219 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ + + L+ +R+ G G+ RS++ LF V+ + AA E +H
Sbjct: 437 ERLDGAVLEDLHASLVGPVRHTTAGLGRSWRSYVSMAAIELFGVDSEPYRPLVAAAELLH 496
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ------ 137
SLI DD+ D +RRG+P H+ + E A+ AG +++
Sbjct: 497 TGSLIVDDVE--DRSPLRRGRPAAHVVFGEAVAVNAGTAAYFALDRVLNRVLPDDAALRL 554
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE--- 194
+ +++ + + +D E D + +
Sbjct: 555 RVYQVYLRVLRAGHGGQAIDIAGHRAAMDEAVETGDAEALLRRVRSGHWLKTAAPVRGLA 614
Query: 195 -SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
GA++A A + + L + + +G+ +Q++DD++D
Sbjct: 615 EIGALVAGAREEQFRALGEYFDAVGLAYQISDDVMDLRG 653
>gi|294898818|ref|XP_002776390.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239883328|gb|EER08206.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 365
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 57/207 (27%), Gaps = 14/207 (6%)
Query: 43 IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD-DLPSMDNGYIR 101
+ Y LGGK R ++ ++ AAI + + +
Sbjct: 87 MNYNCLGGKMTRGLTTVATYVALCGDYREHVKDAAAIGWSAEFLQASFLMFDDVMDQSET 146
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
R T + E++ + N ++ + + + +L + + +
Sbjct: 147 RRGSTCWYRLPEISMPNSLNDVVFIENAVYTLLIESTGFDADIKLAIIRLCHDITLRTII 206
Query: 162 GQMLDIQD-----------EFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKE 208
GQ LD+ + E G MA + +
Sbjct: 207 GQHLDLNSVRPDDYTVDLSRYTMERYWATTAYKTAYYSFWLPVALGMAMARFSLDDPDYK 266
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+ LG FQ DD LD D
Sbjct: 267 GTKDACILLGNFFQAQDDFLDVFGDPE 293
>gi|118379849|ref|XP_001023090.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
gi|89304857|gb|EAS02845.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
SB210]
Length = 465
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 85/258 (32%), Gaps = 36/258 (13%)
Query: 4 GLPSKLQENSKRID--TILDDLLL----------------------QTASHMQTQHNDRL 39
+ L + K + IL+ ++ + + ++ +
Sbjct: 108 EFKNVLHQYIKEFEESQILEKIIEKKVDDQSQIRKLSKGFTYTQEDEQQHDLIKCLSEPI 167
Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
++ GGK+IR A +N +G + + +L S+
Sbjct: 168 WEMLK---RGGKRIRPIFCALIAEAYNHKLTIQKMIGNIFKMNYLIVQQIANLKSL---- 220
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNI 154
RR K VHI Y +I A N + + K + ++ +S H
Sbjct: 221 KRREKDAVHIIYGVDISINAANYGYYAPLNYLLNLKKYNQKTISQLSLIYAYEMSQIHLG 280
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+L + E Q + KTGAL ++ + + + L F
Sbjct: 281 QGWDLLWHNQKKESLKIPTEQQYLQMVVNKTGALFRMMIRMLGVVLNLEERNVKMLSLFT 340
Query: 215 ENLGIIFQLADDLLDCEE 232
E +G +FQ+ DD+++ +
Sbjct: 341 EKVGAVFQIQDDIINLDS 358
>gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 360
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)
Query: 10 QENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTEC 61
N + I+ + L+ + A+ + D L + + GGK++R+ L +
Sbjct: 5 ANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALLALDA 64
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ + R +D +RRG+P+ H ++ +
Sbjct: 65 FDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSG 124
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-----------QMLD 166
G GL +I+++ ++ S+L + N M +M
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184
Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
+ + + + KT + A S ++ G LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244
Query: 225 DDLLDCEE 232
DDLLD
Sbjct: 245 DDLLDVVG 252
>gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 374
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 63/186 (33%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L CA +A+ A+E +H +SL+HDD+ D +R
Sbjct: 85 GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDIMDGDGTRRQRETVWKAY 144
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
L + R LS + +L
Sbjct: 145 GTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLSGLARGQAEDLLLAARPWTGP 204
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + ++KTG L+ A G ++ A + L G +LG+ FQ DDLL
Sbjct: 205 GAVRTDEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAFQAVDDLLG 264
Query: 230 CEEDLP 235
D
Sbjct: 265 IWGDPA 270
>gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F52a Mutant
Length = 299
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L A V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSAKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 168
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 45 YAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
Y + GGK++R LV A + + + A IE IH +L+HDD+ +D +RR
Sbjct: 9 YIVNSGGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDV--VDGSELRRN 66
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ T + + +++ G+ L + +FE++ + + +I S + LQ +
Sbjct: 67 QETANAVWGNEASVLVGDFLYSRSFEMMVAVEQMRVMDILSHATNRIAEGEVLQLL---- 122
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
++ + E + K KT L G +++ +++ L
Sbjct: 123 --NVHNPETSEADYMEVIKRKTATLFEAGTRLGGVISGVDPQQEQALA 168
>gi|255024193|ref|ZP_05296179.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
Length = 151
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
L +C SGA + A++ + G LG+ FQ+ DD+LD D
Sbjct: 3 QLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 52
>gi|145233581|ref|XP_001400163.1| geranyltranstransferase [Aspergillus niger CBS 513.88]
gi|134057095|emb|CAK44383.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 61/227 (26%), Gaps = 12/227 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECASLFNVNHLTALRV 75
+DLL + Q+ A+ + GGK R V +
Sbjct: 18 EDLLNYAKQYKLPQNALEWFEKALNVNVPGGKLNRGLSVPDTGLALLKKPLTDEQFKHLS 77
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--S 133
+ MD RRG+P + I LL II
Sbjct: 78 LLGWLTELLQAFFLVSDDIMDGSITRRGQPCWYKHEGVGLIAINDAFLLESGIYIILKKY 137
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ +L T+ L + + +D + + T ++
Sbjct: 138 FRSHPAYIDLVELFHETTYQTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKTAYYSF 197
Query: 194 ESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A A+ + LG FQ+ DD LD D
Sbjct: 198 YLPVALALHYLQLATPENLRQAHDILIPLGQYFQVQDDYLDAYGDPA 244
>gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51]
gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 319
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 11/178 (6%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + AL +E I DD+ DN + + +
Sbjct: 50 LTRMSCECAGGDPEDALPGAIGMEFFALALDIFDDVQDQDNENMPWRQLPDAQAINLAIC 109
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
++ + + R I + + + + Q
Sbjct: 110 LLMLSDE--------AISAIPDNRLFREVAATLHRTGICASNGQFREFIYDDRQQVSFEQ 161
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL---LDCE 231
F + K G+L AC+ GAI+ A + L FG NLGI+ Q+ +DL LD
Sbjct: 162 YFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLNDFLDFF 219
>gi|168703799|ref|ZP_02736076.1| geranyltranstransferase [Gemmata obscuriglobus UQM 2246]
Length = 129
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMA------HASQNEKERLRCFGENLGIIFQLADDL 227
++ I + KTGAL + G A A + + + G+ FQ+ DDL
Sbjct: 1 MGRLEDIHRRKTGALFRSSLRLGVFAAQAERPAGACPEALKAADDYADAFGLAFQVTDDL 60
Query: 228 LDCEEDLPK 236
LD E K
Sbjct: 61 LDVESTADK 69
>gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 288
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN- 68
+ + RI+ L + L Q RL +A+R A+ G ++R L A +
Sbjct: 2 DVTNRIERALTEALSQAD---LAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDN 58
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
GAA+E +HC SL+HDDLP D IRRG+P+VH + E A++ G+ L+
Sbjct: 59 PAATEAAGAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALI---- 114
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ + +L+ G G+ G + E E + + KTGAL
Sbjct: 115 -VLAFQTIARVNCAPDRLLKLTQVVGGAVGVPLGIVAGQAWECESEINLAHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A +GA A A R GE +G +Q+
Sbjct: 174 FVAATAAGAASAGADPE---PWRLVGEKIGEAYQV 205
>gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 379
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 7/192 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A TA+ A+E IH +SL+HDD+ MD RR + +V
Sbjct: 83 GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDI--MDGDETRRRRASVWK 140
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
Y A++AG+ L A + ++ + L + +L
Sbjct: 141 AYGTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQLSGALGDLVRGQAEDLLFESRPWT 200
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + + + KTGAL+ A GA +A A + L G ++G+ FQ DDL
Sbjct: 201 GPDAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRHVGVAFQAVDDL 260
Query: 228 LDCEED---LPK 236
L D K
Sbjct: 261 LGIWGDPRVTGK 272
>gi|254729448|gb|ACT79808.1| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
Length = 394
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 17/245 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDIPDVTKWLAKVLQYNVPGGKKNRGLALVLSFKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLRLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I + Q + + + +++
Sbjct: 170 NDGILLEQTIYQLIKKYFKDKPYYVHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EEDLP 235
D
Sbjct: 290 YGDPE 294
>gi|62959205|gb|AAY23710.1| farnesyl diphosphate synthase [Roseobacter sp. JL-129]
Length = 144
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ E+GA +A A L + + LG+ FQ+ADD+LD E
Sbjct: 105 IRWSAEAGARLAKAD---IAPLTAYADALGLAFQIADDILDVE 144
>gi|156847950|ref|XP_001646858.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117539|gb|EDO19000.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 352
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 65/231 (28%), Gaps = 16/231 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-------NH 69
T++++L + + + + Y GGK R V + ++ +
Sbjct: 17 TLVEELKQVLVKYGMPEEAIQWYEKNLNYNTPGGKLNRGLSVVDTYAILKGYNSVDDLSK 76
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
RV C+ M + I R + ++V I + + A
Sbjct: 77 DEYRRVAVLGWCVELLQAYFLVADDMMDKSITRRGQPCWYRVEDVGEIAINDAFMLEAAI 136
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQK 182
K ++ L+ M + +F E F++
Sbjct: 137 YELLKKYFRSESYYIDLIELFHDVTFQTEMGQLLDLITAPEESVDLSKFSLEKHSFIVIF 196
Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + ++ + LG FQ+ DD LDC
Sbjct: 197 KTAYYSFYLPVALAMYVAGNHDPKDLKQAQDVLIPLGEYFQIQDDYLDCFG 247
>gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
Length = 713
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 82/219 (37%), Gaps = 13/219 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ Q + ++ L+ +R L G+ R + LF + + A E +H
Sbjct: 373 PPLDTSTQDRLHESLVQPVRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTELLH 432
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI- 142
SLI DD+ D +RRG+ TVH AI AG ++ +
Sbjct: 433 TASLIIDDIQ--DGSPLRRGRATVHEVIGTPAAITAGTAAFFAFEPLLQRIPQHDPATML 490
Query: 143 --RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-------QKMKTGALMCFAC 193
+ +L Q + D + + ++K+G +
Sbjct: 491 RVYQLCLRALRAGHAGQALDLSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGVPVRCIA 550
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E A++A A + + + + E +GI++Q++DD+ D +
Sbjct: 551 EVAAVLADADEAQIRAVGDYFETVGIVYQISDDVADLDG 589
>gi|109130476|ref|XP_001097788.1| PREDICTED: farnesyl pyrophosphate synthase-like [Macaca mulatta]
Length = 380
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 17/250 (6%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L + +T +L + Y +GGK +
Sbjct: 29 MNGDQKSDVYAQGKQDFIQHFSQIVRVLTEDEMGYSETGDAIAQLKEVLEYNAIGGKYHQ 88
Query: 55 SFLVTECAS-------LFNVNHLTALRVGAAIECIHCYSLIHDDLPS--MDNGYIRRGKP 105
V + + AL +G +E + + L+ DD+ +
Sbjct: 89 GLTVLVASRELVEPRKQDADSLQRALTMGWFVELLQAFFLVADDIMDSSLSPQGQIWWYQ 148
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQM 164
+ D + + + + ++ + D I+ L S +IG ++
Sbjct: 149 KPGMGLDAINDAMLPEACIYHLLKLYCLEQPYYLDLIQLFLQSSYQTDIGQTLDLITAPQ 208
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQL 223
++ E + I K K + +A + + ++G FQ+
Sbjct: 209 GNVGLGRFTEKRYKSIVKYKAAFYSYLPVAAAMYIAGIDGEKNHANAKKILLDMGEFFQI 268
Query: 224 ADDLLDCEED 233
DD LD D
Sbjct: 269 QDDYLDLFGD 278
>gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H]
gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H]
Length = 522
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 72/187 (38%), Gaps = 9/187 (4%)
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
KK+ ++ ++ + + + + +D+ RRG +H +
Sbjct: 228 KKL--AIINYASNNISKKEIGVNQCRIIAASEIIHMGSLLHDDVIDDSNNRRGALALHKK 285
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
Y +I++G+ LL A + +S + ++ SL + + + ++
Sbjct: 286 YGNKISILSGDFLLARASSVFASIGCPQICKRFAYVVESLIKG---ELLQTNLKFNNIED 342
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + K + FAC AI++ ++ G ++G+ FQL DD LD
Sbjct: 343 ALKTYFIKTYHKTASLFSHLFACM--AILSFKNEKIINLCFNLGLHIGMAFQLYDDYLDY 400
Query: 231 EEDLPKK 237
+ D KK
Sbjct: 401 KPD--KK 405
>gi|194884015|ref|XP_001976091.1| GG22668 [Drosophila erecta]
gi|190659278|gb|EDV56491.1| GG22668 [Drosophila erecta]
Length = 419
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 57/212 (26%), Gaps = 9/212 (4%)
Query: 33 TQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIH 89
+ A++Y + GKK R L +++ +
Sbjct: 108 SDAAKWFAQALQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIKLAQYLGWCVEMLQSF 167
Query: 90 D--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
MDN RRG+P H + I + ++ A I D + +
Sbjct: 168 FIISDDVMDNSITRRGQPCWHKLENVGMTAINDSLMIENAMYAILKKHFSHLDCYVALME 227
Query: 148 LSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-AS 203
L + EF E +++ +A
Sbjct: 228 LFHEITFITTCGQSLDLLHSNRSVSEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKD 287
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + +G FQ+ DD LDC +
Sbjct: 288 AEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 319
>gi|255955563|ref|XP_002568534.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590245|emb|CAP96421.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 347
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 62/240 (25%), Gaps = 16/240 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
+ I L H + + ++ + GGK R V
Sbjct: 6 KRADFEAIFPKLAQDIIDHAKRYNLPDNALEWFEKSLNVNVPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + I
Sbjct: 66 KQPLTDEQFEHLSILGWMTELLQAFFLVSDDMMDSSITRRGQPCWYRHEGVGLIAINDAF 125
Query: 123 LLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L +I ++ +L T L + + +D +
Sbjct: 126 MLEAGIYLILKQRFRSHPAYIDMVELFHETTWQTELGQLCDLITAPEDNVNLDNFSMEKY 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ T ++ +A A++ ++ LG FQ+ DD LD D
Sbjct: 186 MFIVTYKTAYYSFYLPVALALMYLQLATEENLKQAHDILIPLGQYFQIQDDYLDNFGDPA 245
>gi|126180126|ref|YP_001048091.1| polyprenyl synthetase [Methanoculleus marisnigri JR1]
gi|125862920|gb|ABN58109.1| Polyprenyl synthetase [Methanoculleus marisnigri JR1]
Length = 295
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 14/223 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNV 67
+E ++I ++D + +TA + SA+ L GK++R+ L+ A L
Sbjct: 4 FREFLEKIRPVVDRRIAETAG-----GEGEIDSAVLALLSKGKRMRAGLLLYIHAGLART 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
T + A ++ +D RRG P++H+ E A++ G+L
Sbjct: 59 AAPTRQALDLACAVELAHAASLILDDMLDGDTARRGVPSLHLTRGEGRAVLDAVGILALP 118
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ + + + S G+ + G I KTG
Sbjct: 119 YALAAPYGAGYVTMLASAQRK---MARGVAWEMLGGPDLPAA-----ELYDAIVARKTGC 170
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
L A GA++ FG G Q+ADD+ D
Sbjct: 171 LFSLAAAWGAMVTGKEDAVVAAFGEFGLAAGKAMQVADDIADL 213
>gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20]
Length = 386
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 71/274 (25%), Gaps = 44/274 (16%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFL--- 57
LP+ L ++ L +L + Q LL A L GGK++R+ L
Sbjct: 2 SALPAALGRVRPAVEHRLTQVLEDCHLRWEDLGQAAPELLEAAGSVLSGGKRMRAVLGAV 61
Query: 58 --VTECA------SLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
A L + + + + + LP+ + R
Sbjct: 62 GCAILSAPKQRAERLTGSDAVHLGTALELYQASALVHDDLMDSADTRRGLPAAHRVFARN 121
Query: 103 GKPTVHIQYDEVTAIIAGNGLLT-------YAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
+ + + L ++ + + + +
Sbjct: 122 HEARGWLGRPQTFGANGAILLGDLLLSLAGEEMSALAPSRASSQTRSSAVRYARSAFDAM 181
Query: 156 LQGMLGGQM-----------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA---- 200
+ GQ D + + ++ ++
Sbjct: 182 TTEVALGQFLDVRSENLPLPWDQEAGAAARRMQDEALSVVRHKSARYSVRHPLLIGALLA 241
Query: 201 --HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S E L FGE++GI FQL DD L
Sbjct: 242 GLDPSGTTAEHLAAFGEDVGIAFQLRDDDLGVFG 275
>gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
flavus NRRL3357]
gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
flavus NRRL3357]
Length = 320
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 12/202 (5%)
Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ + Y L GGK IR L+ + A + + +H SL+ D
Sbjct: 27 PKSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLID 86
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ D+ +RRGKP H + I + N A + +SS + +++ + +L+L
Sbjct: 87 DIQ--DSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNL 144
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ E Q + KTG L A + + ++ + + L
Sbjct: 145 HRGQGM-----DLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCI-PL 198
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
LG IFQ+ DD+L+
Sbjct: 199 TN---TLGTIFQIRDDILNLSG 217
>gi|269977242|ref|ZP_06184215.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
gi|307700943|ref|ZP_07637968.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
gi|269934545|gb|EEZ91106.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
gi|307613938|gb|EFN93182.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 60/211 (28%), Gaps = 21/211 (9%)
Query: 46 ALLGGKKIRSFLVTECASLFNVNHLTALR---------------VGAAIECIHCYSLIHD 90
LL GK+ R+ + + I + I
Sbjct: 46 LLLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDIIDEARIRR 105
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAII------AGNGLLTYAFEIISSPKTQLKDNIRS 144
LPS ++ + + A N A + + S + Q +
Sbjct: 106 GLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGLDSARLQALGQLYV 165
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ + + L + L E+ + +I+ + GA +A A+
Sbjct: 166 TMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALAGATP 225
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +L F LGI +QL DD L
Sbjct: 226 DLLVKLEDFSTPLGIAYQLRDDDLGIFGSQE 256
>gi|66815945|ref|XP_641989.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
gi|74856499|sp|Q54XP1|Y8823_DICDI RecName: Full=Probable farnesyl diphosphate synthase DDB_G0278823;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|60470032|gb|EAL68013.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
Length = 356
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 73/254 (28%), Gaps = 23/254 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLGGKKIRS 55
MN L +E + + LL + ++ + + + I+ GGK R
Sbjct: 1 MN-NLKKNDKEVLEEFANLFPILLNEIKKELEKIDFPKESIHWIETVIKANSTGGKMNRG 59
Query: 56 FLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
V E N H + MD RRGKP + Q
Sbjct: 60 ISVLESLESLNEGRALTRHEIFQAQTLGWCVEIFQACYLVSDDIMDQSLKRRGKPCWYKQ 119
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPK----TQLKDNIRSQLMLSLTHNIGLQ-------GM 159
+ G + +F I S K+ ++ L H G Q +
Sbjct: 120 KRPNSDQEVGLAAINDSFIIESCVFILLEKYFKNESYYLNIVELFHKTGFQTQLGQLLDL 179
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLG 218
+ + + + F +M+ + + + +G
Sbjct: 180 TTQPIRGDFSSINLKNHTRITEYKTAYYSFFFPVALAMLMSKINHEQAFTTAKDILLPMG 239
Query: 219 IIFQLADDLLDCEE 232
+ FQ+ DD LDC
Sbjct: 240 VYFQVQDDFLDCYG 253
>gi|49259555|pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima A76yS77F
MUTANT
Length = 299
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLYFLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 452
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 88/275 (32%), Gaps = 48/275 (17%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
G LP+ + + + + L + + H +A Y GK +R +V +
Sbjct: 78 GDLPTI--DPLRIVAKEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMS 135
Query: 63 SLFNVNHLTALRVGAAIECIH--------------------------------------- 83
++ R A +
Sbjct: 136 RATSLCPKAPQRQQATAQVSAAIDTSISPPSILSDFNPSAGTESEPVLADAGILPSQRRL 195
Query: 84 ------CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
++ +D+ RRG P+ ++++ A++AG+ LL A ++ +
Sbjct: 196 AEITELIHTASLLHDDVIDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHA 255
Query: 138 LKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ + + + + Q T +KT +L+ +C +
Sbjct: 256 EVIELLATVIANLVEGEFMQLKNTARDETNPQWSEDALTYYLQKTYLKTASLISKSCRAA 315
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
A++ A + +G NLG+ FQL DDLLD
Sbjct: 316 ALLGGADAQTVDAAYSYGRNLGLAFQLVDDLLDYT 350
>gi|255716258|ref|XP_002554410.1| KLTH0F04642p [Lachancea thermotolerans]
gi|238935793|emb|CAR23973.1| KLTH0F04642p [Lachancea thermotolerans]
Length = 351
Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 71/249 (28%), Gaps = 21/249 (8%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
L K +D L +L T M +++ Y GGK R V + ++
Sbjct: 8 NKFLSVFPKLVDE-LKSIL--TGYGMTADAVQWYENSLNYNTPGGKLNRGLSVVDSYAIL 64
Query: 66 NVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
++ CI M + I R + +EV I
Sbjct: 65 KGKKSYEELSEEEYFKLATLGWCIELLQAYFLVADDMMDKSITRRGQPCWYRVEEVGEIA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEF 171
+ + +D+ +L+ + + D+F
Sbjct: 125 INDAFMLEGAIYCLLKNHFKQDSYYVELLELFHDVTFQTELGQLLDLITAPEDNVDLDKF 184
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDC 230
+ F+++ A S + ++ + LG FQ+ DD LDC
Sbjct: 185 SLDRHSFIVRFKTAYYSFYLPVALAMHAAGISDARDLKQAQDVLIPLGEYFQIQDDYLDC 244
Query: 231 EE---DLPK 236
D+ K
Sbjct: 245 FGKPEDIGK 253
>gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
Length = 323
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
+ + I + + + M + L Y + GK++R V A L
Sbjct: 4 INQIKLPIAADIAAFEEKFKASMHSDAP-LLDRITHYIVKRKGKQVRPMFVFFAAKLCGG 62
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ R A +E +H +L+HDD+ +DN Y RRG +++ + A++ G+ LL
Sbjct: 63 IIESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINALWKNKIAVLVGDYLLAKG 120
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I S+ + ++ LQ +M + F + + KT +
Sbjct: 121 LLLSVHNSEFRLLQIVSEAVKQMSEGELLQIEKVRRMDISE------ELYFDVIRQKTAS 174
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
L+ C GA A A + E++R FGE +GI FQ+
Sbjct: 175 LIASCCACGAASAGADEATIEKMRLFGEKVGIAFQIK 211
>gi|17137582|ref|NP_477380.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
gi|4689332|gb|AAD27853.1|AF132554_1 GM06581p [Drosophila melanogaster]
gi|7303618|gb|AAF58670.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
gi|17946048|gb|AAL49067.1| RE52884p [Drosophila melanogaster]
gi|220942720|gb|ACL83903.1| Fpps-PA [synthetic construct]
gi|220952876|gb|ACL88981.1| Fpps-PA [synthetic construct]
Length = 419
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 59/227 (25%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ + ++Y + GKK R L ++
Sbjct: 93 DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIK 152
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E + A N L + +
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 212
Query: 135 KTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K ++ L H I Q + EF E +++
Sbjct: 213 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSF 272
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 273 YLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 319
>gi|209877823|ref|XP_002140353.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66]
gi|209555959|gb|EEA06004.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66]
Length = 340
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 7/201 (3%)
Query: 43 IRYALLGGKKIRSF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGY 99
+ Y + GGK +R LV +N MD G
Sbjct: 44 LNYNIEGGKYMRGITLVEVAYKCWNNGDKILWDEVLTAGWCIEILQAFFLVGDDIMDGGE 103
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--- 156
+RRGK +I + L + ++ + +++M L I
Sbjct: 104 MRRGKVCWYISQGLSMGLNDSFCLYIMSELLMKGALKSYSMDTLARIMDLLHRCIFYTIL 163
Query: 157 -QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
Q + + E +DE MIQ + + G ++A+++ + F
Sbjct: 164 GQHLDTSPLCLKSTENLDERYFAMIQMKTSYYSIYLPICIGLLLANSTSGIPLEVEHFSR 223
Query: 216 NLGIIFQLADDLLDCEEDLPK 236
+G Q+ +D LD + K
Sbjct: 224 IIGEYLQIENDFLDYFGNNEK 244
>gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis
mellifera]
Length = 210
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT +L+ ++ A++A A E +G N+G+ FQL DDLLD
Sbjct: 51 FAHYLTKTYRKTASLIANTLKAEAMLADADDQLAELAFQYGRNIGLAFQLVDDLLDFVS 109
>gi|322696191|gb|EFY87987.1| Farnesyl pyrophosphate synthetase [Metarhizium acridum CQMa 102]
Length = 347
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 83/242 (34%), Gaps = 18/242 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV----- 58
+ L+E + + L++ +L+ A + D L + + LGGK R V
Sbjct: 4 KTTLKEF-EAVYPKLEEAILEHARKYKLPQGELDWLKTNLETNPLGGKCNRGMSVPDSVS 62
Query: 59 -TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A+L + A +G E + + L+ DD+ MD RRGKP + Q
Sbjct: 63 LLLGAALNEEQYFQAATLGWMTELLQAFFLVSDDM--MDGSITRRGKPCWYRQEGVGMIA 120
Query: 118 IAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
I +L + ++ ++ +L T + + +D
Sbjct: 121 INDAFILESSIYVLLRKYFRSHPAYIDIVELFQETTFQTEMGQLCDLLTAPEDKVNLDNF 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + ++ +A A+ ++ LG FQ+ DD LD
Sbjct: 181 SMTKYRFIVIYKTAYYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDN 240
Query: 231 EE 232
Sbjct: 241 FG 242
>gi|195402409|ref|XP_002059798.1| GJ15042 [Drosophila virilis]
gi|194140664|gb|EDW57135.1| GJ15042 [Drosophila virilis]
Length = 415
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 60/227 (26%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ DL T ++ + ++Y + GKK R L ++
Sbjct: 89 DVVRDLTNATKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAEELTPENIK 148
Query: 75 VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + MDN RRG+ H + I ++ A I
Sbjct: 149 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQKCWHKVENVGLTAINDALMIENAMYAIL 208
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
D + + L + EF E ++
Sbjct: 209 KQHFSHLDCYVALMELFHEIAYITTCGQSLDLLNSHKRVSEFTMENYKAIVDNKTAYYSF 268
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 269 YLPFALAMHLAGYKDAEAFRQSKTILLEMGHFFQVQDDFLDCFGNPE 315
>gi|154337619|ref|XP_001565042.1| farnesyl pyrophosphate synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062082|emb|CAM45189.1| farnesyl pyrophosphate synthase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 362
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 72/257 (28%), Gaps = 31/257 (12%)
Query: 11 ENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +R+ + LL M L + LGGK R V + A
Sbjct: 5 ERFQRVYEEVQGFLLSDVEKRFEMDVHRKRYLKDMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MDN RRG+P ++ T +
Sbjct: 65 DARMDAAAMERTLHDACVCGWMIEMLQAHFLVEDDIMDNSKTRRGRPCWYLHPGVTTQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------- 170
+GL+ A+ + ++++ + + +
Sbjct: 125 INDGLILLAWATQVALHYFADRPFLAEVLRVFHDVDFTTTIGQLYDVTSMVDSAKLDANV 184
Query: 171 ----------FIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGI 219
+ ++ G +++ A + +KE +G
Sbjct: 185 AHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTAEKVDKEVTHKVSMVMGE 244
Query: 220 IFQLADDLLDCEEDLPK 236
FQ+ DD++DC K
Sbjct: 245 YFQVQDDVMDCFTSPEK 261
>gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae]
Length = 312
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 12/202 (5%)
Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ + Y L GGK IR L+ + A + + +H SL+ D
Sbjct: 19 PKSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLID 78
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ D+ +RRGKP H + I + N A + +SS + +++ + +L+L
Sbjct: 79 DIQ--DSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNL 136
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ E Q + KTG L A + + ++ + + L
Sbjct: 137 HRGQGM-----DLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCI-PL 190
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
LG IFQ+ DD+L+
Sbjct: 191 TN---TLGTIFQIRDDILNLSG 209
>gi|3395483|emb|CAA08919.1| dimethylallyltransferase [Drosophila melanogaster]
Length = 380
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 59/227 (25%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ + ++Y + GKK R L ++
Sbjct: 54 DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIK 113
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E + A N L + +
Sbjct: 114 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 173
Query: 135 KTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K ++ L H I Q + EF E +++
Sbjct: 174 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSF 233
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 234 YLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 280
>gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
Length = 358
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A L ++A+ A+E +H +SL+HDD+ MD +RR +P V
Sbjct: 68 GKGVRQALAVLGAELCGAPGVSAVPGAVAVELVHAFSLVHDDI--MDGDELRRQRPAVWK 125
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDI 167
Y A++AG+GLL A + ++ L + L+ +L
Sbjct: 126 SYGTGPAVLAGDGLLAAAVQTLAQAPGALGGPAVLRLSGALTSLVRGQADDLLFADRPWT 185
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
E + + + KTGAL+ A GA++ A L G +LG+ FQ DDL
Sbjct: 186 GPEAVRPDAYRSMAEHKTGALLGCAAALGALLGGAPDTTVTALDRAGRHLGVAFQAVDDL 245
Query: 228 LDCEEDLP 235
L D
Sbjct: 246 LGIWGDPA 253
>gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 288
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
+ + RI+ L + L Q RL +A+R A+ G ++R L A ++
Sbjct: 2 DVTNRIERALTEALNQADM---AGCPPRLAAAMRGAVFPRGARVRPRLCHSVALACGEDN 58
Query: 70 LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A E +HC SLIHDDLP D +RRG+P+VH + E A++AG+ A
Sbjct: 59 PGITEAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGD-----AM 113
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+++ D +L+ G+ G + E E + + KTGAL
Sbjct: 114 IVLAFQTIARVDGPADRLLKLTQIIGSAVGVPFGIVAGQAWECESEINLAHYHRSKTGAL 173
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
A GA A + R GE +G +Q+
Sbjct: 174 FVAATAMGAASAGSDPE---PWRMVGEKIGEAYQV 205
>gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 281
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 9 EAKTTIDKLIEQFLNSNRDW-------DLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL DD+ +D RRG + Y I N L+ A I
Sbjct: 62 DSYGGALAIEILHSASLALDDIVDLDVT--RRGDKAAWVIYGNRKVIFITNYLIPTALRI 119
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D ++KTG+L
Sbjct: 120 IQTSYGDDALNTSIE-------------LWKDTSVGALRDMYDNNDYIRTIELKTGSLFK 166
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 167 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQIIDDFVDYK 206
>gi|319745656|gb|EFV97955.1| trans-hexaprenyltranstransferase [Streptococcus agalactiae ATCC
13813]
Length = 226
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
QM ++ KT L A + GA A + G N+G+ F
Sbjct: 53 DQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTF 112
Query: 222 QLADDLLDCEEDLPKK 237
Q+ DD+LD D KK
Sbjct: 113 QILDDILDYTAD--KK 126
>gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 452
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
+Q E FG++LG+ FQ+ DD+LD +L K
Sbjct: 320 TQELIEASYQFGKHLGLAFQIVDDILDYTGSEDELGK 356
>gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis]
gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis]
Length = 303
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 12/213 (5%)
Query: 26 QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
+ + LL +Y L + GK++R L+ + + ++ +H
Sbjct: 3 SISKENLKIRREILLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHN 62
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
SL+ DD+ DN +RRG P H Y I + N + A E + S ++ +
Sbjct: 63 SSLLIDDIE--DNSKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFT 120
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ +L L G+ E + + + KTG L A + +
Sbjct: 121 EELLELHRGQGM-----DIYWRDSYTCPTEEEYRDMVRKKTGGLFRVAVRLMQLFSENKS 175
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
+ L LG+ FQ+ DD + + K+
Sbjct: 176 DFLPLLDM----LGLYFQIRDDYANLLSEEYKE 204
>gi|62959175|gb|AAY23695.1| farnesyl diphosphate synthase [Planococcus sp. JL-69]
Length = 144
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+RRG PTVH ++DE TA++AG+ L T FE+++ P +R+ L LSL G +GM
Sbjct: 12 MRRGMPTVHRKWDEATAVLAGDALQTLGFELVACPDCHPDAVVRADLALSLARAAGARGM 71
Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ GQ LD+ E D Q+ +Q KTGAL ++ E+GA MA A L +
Sbjct: 72 VLGQALDMAAEQSDTPLSLDQITALQAGKTGALFGWSAEAGARMARAD---ITPLTGYAR 128
Query: 216 NLGIIFQLADDLLDCE 231
LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144
>gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus]
gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus]
Length = 205
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
F KT +L+ + ++ A+++ A + E +G NLG+ FQ DDLLD
Sbjct: 46 FAHYFTKTYRKTASLIANSLKAVAVLSGADEQMVELSFQYGRNLGLAFQFVDDLLDFVSS 105
Query: 234 LP 235
Sbjct: 106 SE 107
>gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462]
Length = 176
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
KT AL A +GA + H S +K+ FG LG+ FQ+ DDLLD +
Sbjct: 20 YLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 75
>gi|270602136|ref|ZP_06221589.1| geranyltranstransferase [Haemophilus influenzae HK1212]
gi|270318209|gb|EFA29415.1| geranyltranstransferase [Haemophilus influenzae HK1212]
Length = 105
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A + ++ L + E +G+ FQ+ DD+LD E D
Sbjct: 9 ADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 42
>gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568]
Length = 143
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + + +KTGAL+ A GA+ + S++ L + LG+ FQ+ DD+LD
Sbjct: 15 QMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAAKLGLAFQVIDDVLD 74
Query: 230 CEEDLP 235
CE D
Sbjct: 75 CEADTA 80
>gi|50309979|ref|XP_455003.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644138|emb|CAH00090.1| KLLA0E23299p [Kluyveromyces lactis]
Length = 315
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 7/212 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D L Q + Q + Y L GK++R+ L+ E L+ V + V A I+
Sbjct: 6 DSLDQIIYNDTLQTTKPVTEPFEYLLKQQGKRVRTLLIEEFGKLYEVPKPSIDAVSAFID 65
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SL+ DD+ + R T A + ++++
Sbjct: 66 ELHTASLLIDDI-EDNAELRRGHVAAHKKYGIWTTLNSAQCAVYVSISKLLAKEHEPSLP 124
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+I + ++ L G + + + K KTG L ++
Sbjct: 125 SIINDELIRLHVGQG-----QDIYWRDDGIVPSVNEYYEMAKNKTGGLFRLMVRLLHALS 179
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+K L GI++Q+ DD L+
Sbjct: 180 KKELAQKYDLIPLANAAGILYQIRDDYLNLFS 211
>gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1]
gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax]
Length = 522
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRG P +H +Y +I++G+ LL A + + + ++ SL
Sbjct: 266 HDDVIDDSNNRRGAPALHKKYGNKISILSGDFLLARASSVFAGTGCPQICRRFAYVVESL 325
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + + ++ + + K + FAC AI++ ++ E
Sbjct: 326 IKG---ELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLFAC--IAILSFKNEKVIELC 380
Query: 211 RCFGENLGIIFQLADDLLDCEED 233
G ++G+ FQL DD LD + D
Sbjct: 381 FNLGLHIGMAFQLYDDYLDYKPD 403
>gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
Length = 295
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 28/225 (12%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
+R+D+ + L+ + T ++L GGK++R+ L+ + A T
Sbjct: 1 MQRVDSEITRLIKEIDYDEVTNLFNKLQ--------GGKRLRAGLILKIA-----PTCTT 47
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ AI + + + D + R + ++ E+++
Sbjct: 48 APLLGAIVELIHAASLLHDDVIDEATLRRGVASINATDGSKTAVMLGDILYSKAFSELVA 107
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
K K S LS + ++ + + + + + + A
Sbjct: 108 FDKEIAKVISSSVTALSKGEMMDVKMASAFNSDEERYLEMLYLKTATLIEACAHAAALL- 166
Query: 193 CESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDCEEDLP 235
+K+ L +G+NLG+ FQ+ DD+LD D
Sbjct: 167 ------------AQKDALSHSIYGKNLGLSFQIIDDILDITSDEA 199
>gi|195476038|ref|XP_002090289.1| GE13024 [Drosophila yakuba]
gi|194176390|gb|EDW90001.1| GE13024 [Drosophila yakuba]
Length = 419
Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 59/227 (25%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ + ++Y + GKK R L ++
Sbjct: 93 DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E + A N L + +
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 212
Query: 135 KTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K ++ L H I Q + EF E +++
Sbjct: 213 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYYSF 272
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 273 YLPFALALHLAGFKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 319
>gi|209870011|ref|NP_001119633.3| mitochondrial isoprenyl diphosphate synthase [Acyrthosiphon pisum]
Length = 394
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPADQTDENIRLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 170 NDGVLLEQSIYQLIKKYFKDKPYYTHILELFYDVTMKTSMGQCLDMLTANSFKSKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EED 233
D
Sbjct: 290 YGD 292
>gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum
subterraneum]
Length = 312
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 17/228 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M L + + ++T+ DL + ++ + + L+ A+ GGK++R L+
Sbjct: 1 MAASLQET--DTATLVETLRHDLETRLREKIEGRPDSFLIER---AVRGGKRLRPILLLT 55
Query: 61 CASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
++ AL V A+E H SL+HDD+ +D +RRGK ++ Q AII
Sbjct: 56 VFKTLGGTDYTKALDVAVALELAHSASLVHDDI--VDFDKVRRGKVSLWYQIGAGKAIIQ 113
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
G+ ++ AF I+ ++ + + + E +
Sbjct: 114 GHRIINLAFNIVLDIGEEMTRIFVEAWDRASKGI---------LDEVVNKAALTERLYLL 164
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + KT +L A ++GA++A AS + +R +G +G ++QLADDL
Sbjct: 165 MIREKTASLFEAAAQAGAVLAGASPEMVQHMRRYGSEVGTVYQLADDL 212
>gi|322703753|gb|EFY95357.1| Farnesyl pyrophosphate synthetase [Metarhizium anisopliae ARSEF 23]
Length = 347
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 82/242 (33%), Gaps = 18/242 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV----- 58
+ L E + + L++ +L+ A + D L + + LGGK R V
Sbjct: 4 KTTLDEF-EAVYPKLEEAILEHARKYKLPQGELDWLKANLETNPLGGKCNRGMSVPDSVS 62
Query: 59 -TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
++L + A +G E + + L+ DD+ MD RRGKP + Q
Sbjct: 63 LLLGSALNEEQYFQAATLGWMTELLQAFFLVSDDM--MDGSITRRGKPCWYRQEGVGMIA 120
Query: 118 IAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
I +L + ++ ++ +L T + + +D
Sbjct: 121 INDAFILESSIYVLLRKYFRSHPAYIDIVELFHETTFQTEMGQLCDLLTAPEDKVNLDNF 180
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ Q + ++ +A A+ ++ LG FQ+ DD LD
Sbjct: 181 SMTKYQFIVIYKTAYYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDN 240
Query: 231 EE 232
Sbjct: 241 FG 242
>gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818]
Length = 328
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 12/199 (6%)
Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ ++ + L Y + GK IRS L+ V ++ + + +H SL+
Sbjct: 19 QVSSREEEILQEPYNYITQIPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLL 78
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ DN +RRG P H Y I N + A I++ + + +L
Sbjct: 79 IDDIE--DNSKLRRGIPVAHSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFTDQLL 136
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L G+ E + + KTG L A + + + S++
Sbjct: 137 ELHRGQGM-----DIYWRDAFVCPTEDEYRTMVLRKTGGLFQLAVQIMQLFSDDSRDYTP 191
Query: 209 RLRCFGENLGIIFQLADDL 227
L F G+ FQ+ DD
Sbjct: 192 LLNAF----GLYFQIRDDY 206
>gi|302819273|ref|XP_002991307.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
gi|300140887|gb|EFJ07605.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
Length = 343
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 70/239 (29%), Gaps = 13/239 (5%)
Query: 7 SKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA--- 62
+ L+ +DT +LL + + + + + Y + GGK R V +
Sbjct: 2 ADLKSMEVSVDTTDKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLL 61
Query: 63 ----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY---IRRGKPTVHIQYDEVT 115
L A +G IE + Y L+ DD+ + K
Sbjct: 62 KSEDELSRDEIEQAFALGWCIEWLQAYFLVMDDIMDNSHTRRGKPSWFKQPNVGLVAAND 121
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A++ N + + + T + ++ +
Sbjct: 122 ALLLRNHVPRILRKYFHGQPYYFDLRELFDEVEYQTACGQMLDLITSPAGKVDLSKYVME 181
Query: 176 QVFMIQKMKT-GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
I K KT M+ S N K E + +G FQ+ DD LDC
Sbjct: 182 TYLRIVKFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDCYG 240
>gi|14625002|dbj|BAB61881.1| farnesyl diphosphate synthase [Agrobacterium ferrugineum]
Length = 141
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P+MDN +RRG PTVH ++DE A++AG+ L T +FE+++ M
Sbjct: 1 HDDMPAMDNDDLRRGLPTVHRKWDEGVAVLAGDALQTLSFELLTDATLGPNRLALISSMA 60
Query: 149 SLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
G+ G + + Q+ +Q KTGAL ++ +G ++A A
Sbjct: 61 RAAGARGMVLGQARDIAAETAATPLTLPQITRLQAGKTGALFEWSATAGPVLAGADTG-- 118
Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
L F +G+ FQ+ADD+LD E
Sbjct: 119 -PLGRFAAAIGLAFQIADDILDVE 141
>gi|157869471|ref|XP_001683287.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin]
gi|68224171|emb|CAJ04700.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin]
Length = 362
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 71/252 (28%), Gaps = 31/252 (12%)
Query: 11 ENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +++ + + L + M L S + LGGK R V + A
Sbjct: 5 ERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MD+ RRGKP ++ +
Sbjct: 65 DTQMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTAQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------- 170
+GL+ A+ + ++++ + + +
Sbjct: 125 INDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAKLDAKV 184
Query: 171 ----------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGI 219
+ ++ G +++ + +K+ +G
Sbjct: 185 AHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTLEKVDKKATHKVAMVMGE 244
Query: 220 IFQLADDLLDCE 231
FQ+ DD++DC
Sbjct: 245 YFQVQDDVMDCF 256
>gi|62959207|gb|AAY23711.1| farnesyl diphosphate synthase [Roseobacter sp. JL-135]
Length = 144
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ E+GA +A A L + + LG+ FQ+ADD+LD E
Sbjct: 105 IRWSAEAGARLAQAD---AAPLTAYADALGLAFQIADDILDVE 144
>gi|39545738|emb|CAE03415.3| OSJNBa0071I13.16 [Oryza sativa Japonica Group]
Length = 434
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/251 (12%), Positives = 64/251 (25%), Gaps = 38/251 (15%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-------ASLFNVNHLTAL 73
DDL+ + + + L I Y + GGK R V + + + + A
Sbjct: 67 DDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLAC 126
Query: 74 RVGAAIECIHCYSLIH-----DDLPSMDNGYIRRGKPTVHIQ----YDEVTAIIAGNGLL 124
+G + ++ G +R P+ H +
Sbjct: 127 VLGCFKHVHYYLMTSWTIHIPGEIRFAGTGDLRFFNPSSHDTLILLISCNKTGHLVLPPI 186
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--- 181
+ + +M+ + ++ Q+ +
Sbjct: 187 FLLQVGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTH 246
Query: 182 -------------------KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ +++ A + L+ +GI FQ
Sbjct: 247 TGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQ 306
Query: 223 LADDLLDCEED 233
+ DD LDC D
Sbjct: 307 IQDDYLDCFAD 317
>gi|119167462|gb|AAY33489.2| putative mitochondrial isoprenyl diphosphate synthase precursor
[Megoura viciae]
Length = 394
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 79/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTEC--- 61
+ ++ ++ DL + L ++Y + GGKK R LV
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKMLQYNVPGGKKNRGLALVLSFKML 111
Query: 62 ---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
A + N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 ASPADQTDENLRLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 170 NDGILLEQTIYQLIKMYFKDKPYYTHILELFYDVAMKTAMGQCLDMLAANSFKSKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EED 233
D
Sbjct: 290 YGD 292
>gi|49259554|pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima A76y Mutant
Length = 299
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLYSLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|325118365|emb|CBZ53916.1| hypothetical protein NCLIV_036980 [Neospora caninum Liverpool]
Length = 465
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 68/250 (27%), Gaps = 24/250 (9%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHN----------------DRLLSAIRYAL-LG 49
L+ +ID L + + + RY L
Sbjct: 93 ETLEARRDQIDARLKAFAGSVDPFAFVREDIESLDLSLLSSVRSAYPEVSPVARYLLTAP 152
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK+ R V + +L L L + VH
Sbjct: 153 GKRFRP--VLLLLLRQALLNLPVLSRAEPGSKA-DSPRSVSSLSPGSASPLLSRGSAVHT 209
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
E + + E+I + + + S ++ ++ + G + + D
Sbjct: 210 AESEARRKDGLELCMVHVAELIHTARNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSD 269
Query: 170 EFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + KT +L+ +C AI+ FG +G+ FQL D
Sbjct: 270 PRQNLENALRMYLTKTYHKTASLIAESCACLAILMGLPSRWVSWSADFGACVGMAFQLYD 329
Query: 226 DLLDCEEDLP 235
D LD
Sbjct: 330 DELDFTASSA 339
>gi|46015925|pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima S77f Mutant
Length = 299
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLAFLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|163847875|ref|YP_001635919.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525750|ref|YP_002570221.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
gi|163669164|gb|ABY35530.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449629|gb|ACM53895.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
Length = 305
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 16/220 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M +PS+L + R++ IL + + S + + + A ++R+ +V
Sbjct: 1 MTFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATD-------RLRALVVLA 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L N + AA+E I + HD L + RR + +D ++ G
Sbjct: 54 VARLGNYTDAQVVHAAAAVELIEAATRAHDTLID---EHARRTGRGANGSWDHGVVLMIG 110
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L A ++ ++ SQ ++ + + + T+
Sbjct: 111 DYLFALAAGEMARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALATYWQRTEALSG 170
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ A C + E FG +LG+
Sbjct: 171 ALLAAAAQAGILC------GNLPDTLLEPAARFGMHLGLA 204
>gi|1524295|emb|CAA65645.1| farnesyl pyrophosphate synthetase [Neurospora crassa]
Length = 347
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 68/236 (28%), Gaps = 16/236 (6%)
Query: 13 SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
K +++ L++ LL+ A + Q ++ LGGK R V + AS+
Sbjct: 7 LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILLG 66
Query: 68 NH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A + + + + E ++A N
Sbjct: 67 RPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFM 126
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--------DIQDEFIDETQV 177
I + K + + R L L H + Q +G D F +
Sbjct: 127 LESAIYTRLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYT 186
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ M A+ ++ LG FQ+ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNFG 242
>gi|156050145|ref|XP_001591034.1| farnesyl pyrophosphate synthetase [Sclerotinia sclerotiorum 1980]
gi|154692060|gb|EDN91798.1| farnesyl pyrophosphate synthetase [Sclerotinia sclerotiorum 1980
UF-70]
Length = 347
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 16/241 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV------ 58
+ L+E +++DLL + Q L A YA +GGK R V
Sbjct: 4 TTTLKEFESVFPKLVEDLLAHAQKYNLPQQGQDWLKACLYANTIGGKCNRGMSVPDSVSL 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
A L + + +G E + + L+ DD+ MD RRG+P + Q + I
Sbjct: 64 LLEAPLSEEQYFESATLGWMTELLQAFFLVSDDI--MDGSITRRGQPCWYRQPNVGMIAI 121
Query: 119 AGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+L A + ++ +L +T+ L + +D
Sbjct: 122 NDAFILESAIYSLLKKYFRSHPSYVDLIELFHEITYQTELGQLCDLLTAPEDKVDLDNFS 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + T ++ +A A+ ++ LG FQ+ DD LD
Sbjct: 182 MTKYDFIVTYKTAYYSFYLPVALALHHQKIATPKNLKQAEDILIPLGQYFQIQDDYLDNF 241
Query: 232 E 232
Sbjct: 242 G 242
>gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi]
Length = 299
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 15/216 (6%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
+ IL Q + ++ LL Y + GK+IRS L +
Sbjct: 1 MSEFNDILAKC---RDKSCQKEQDETLLQPFAYIQQIPGKQIRSKLALAINHWLAIPVEK 57
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+G ++ +H SL+ DD+ DN +RRG P H Y + I A N +L A E +
Sbjct: 58 LAPIGEIVQMLHNSSLLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKV 115
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ +L L G++ E++ + KTG L
Sbjct: 116 QQLGHPDATKVYTEQLLELHRGQGME-----IYWRDNFACPTESEYKQMTIRKTGGLFML 170
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
A + + ++ + +L LG+ FQ+ DD
Sbjct: 171 AIRLMQLFSD-NKKDFSKLAAI---LGLYFQIRDDY 202
>gi|169776171|ref|XP_001822552.1| geranyltranstransferase [Aspergillus oryzae RIB40]
gi|238502861|ref|XP_002382664.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357]
gi|83771287|dbj|BAE61419.1| unnamed protein product [Aspergillus oryzae]
gi|220691474|gb|EED47822.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357]
Length = 346
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 60/227 (26%), Gaps = 12/227 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECASLFNVNHLTALRV 75
+D+L ++ + A+ + GGK R
Sbjct: 18 EDILAYAKESNLPENALQWFEKALNVNVPGGKLNRGLSCPDTGLALLEKPLTEEQFKHLS 77
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--S 133
+ MD+ RRG+P + Q I LL + +I
Sbjct: 78 ILGWLTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGLIAINDAFLLESSIYVILKKH 137
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
++ L T L + ++ + + T ++
Sbjct: 138 FRSHPAYADFIDLFHETTWQTELGQLCDLITAPEDKVDLNNFSMEKYMFIVTYKTAYYSF 197
Query: 194 ESGAIMA-----HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A A+ + + LG FQ+ DD LD D
Sbjct: 198 YLPVALALLYLQRATPSNLRQAHDILIPLGQYFQVQDDYLDAYGDPE 244
>gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
Length = 298
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF---ACESGAIMAHASQNEKERLRCF 213
+ ++ G+++ + + + + K + ++ A++ + + +
Sbjct: 113 EHLVAGEVMQMTAKPESLSSMEHYVKKTYYKTASLIANSSKAIALLGGHGEKSADLAYDY 172
Query: 214 GENLGIIFQLADDLLDCEED---LPK 236
G+NLG+ FQ DD+LD L K
Sbjct: 173 GKNLGLAFQFQDDVLDFIGSESILGK 198
>gi|46015923|pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima V73y Mutant
gi|46015924|pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima V73y Mutant
Length = 299
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A ++ + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELYHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus P2]
gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus 98/2]
gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
[Sulfolobus solfataricus P2]
gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2]
Length = 281
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 9 EAKATIDRLIEQFLNSNRDW-------DLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL DD+ +D RRG + Y I N L+ A I
Sbjct: 62 DSYGGALAIEILHSASLALDDIVDLDAT--RRGDKAAWVVYGNRKVIFITNYLIPTALRI 119
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D + ++KTG+L
Sbjct: 120 IQTSYGDDALNTSIE-------------LWKDTSVGALRDMYDNSDYIRTIELKTGSLFK 166
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 167 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206
>gi|254410383|ref|ZP_05024162.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196182589|gb|EDX77574.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 324
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 68/231 (29%), Gaps = 22/231 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + + + S + ++ L + + L +
Sbjct: 17 FQELLPDVRSYVRQHAPSDWPEFRSVLTAVTDEPLSAL------------AILPLASCAA 64
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
N A+ V AA + I DDL D + + L
Sbjct: 65 VGGNPQEAIPVSAAWVVLSLAMRILDDLQDQDRPDALWATIGL------ARSFNFSAALY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
E+++ Q +++ + +L GQ D+++ + + + K
Sbjct: 119 ALCNELLA----QAAWTPELYRVINQHFSQTGLHLLKGQDRDLRNLTLTIEDYWHTIEEK 174
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ AC +G + + + R FG +LG+ QL DD
Sbjct: 175 NASAFVLACTAGGLCGPDNPKLLDACRRFGYHLGLALQLFDDFEGIWGQSG 225
>gi|322796024|gb|EFZ18648.1| hypothetical protein SINV_14286 [Solenopsis invicta]
Length = 182
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
KT +L+ ++ AI++ E +G N+G+ FQL DDLLD
Sbjct: 23 FAHYLTKTYRKTASLIANCVKAVAILSEVDDRTIEMAFQYGRNVGLAFQLVDDLLDF 79
>gi|195119624|ref|XP_002004330.1| GI19872 [Drosophila mojavensis]
gi|193909398|gb|EDW08265.1| GI19872 [Drosophila mojavensis]
Length = 413
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 57/227 (25%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ DL T ++Y + GKK R L ++
Sbjct: 87 DVVRDLTTYTKGFNCNDAVKWFAQVMQYNVPRGKKNRGILTVLTYKNLVPAEDLTPENIK 146
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E +IA N L + +
Sbjct: 147 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQKCWHRVESVGLIAINDALMIENALYAIL 206
Query: 135 KTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
K ++ L H + Q + EF ET ++
Sbjct: 207 KQHFSHLDCYVALMELFHEVTYITTCGQSLDLLNSNKSVSEFTMETYKAIVDNKTAHYSF 266
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 267 YLPFALAMHLAGYKDAEAFRQSKTILLEMGHFFQVQDDFLDCFGNPE 313
>gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi]
Length = 197
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
F KT +L+ + ++ A+++ A + E +G NLG+ FQ DDLLD
Sbjct: 38 FAHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLDFVSS 97
Query: 234 LP 235
Sbjct: 98 SE 99
>gi|119167460|gb|AAY33488.2| putative mitochondrial isoprenyl diphosphate synthase precursor
[Aphis fabae]
Length = 394
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 69/243 (28%), Gaps = 13/243 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LV----TE 60
+ ++ ++ DL + L ++Y + GGKK R LV
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDIPDVTKWLAKVLQYNVPGGKKNRGLALVPSFKML 111
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIA 119
+ + L + MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLRLSYILGWCVEILQAYQLVLDDIMDNAITRRGRPCWYRHNDIGLMAVND 171
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G L +++I + Q + + + +++ +
Sbjct: 172 GILLEQTIYQLIKKYFKDKPYYVHILELFYDVTMKTSMGQCLDMLTANSFKTKKLEKYTM 231
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A + + +G FQ+ DD LDC
Sbjct: 232 ENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYG 291
Query: 233 DLP 235
D
Sbjct: 292 DPE 294
>gi|322491828|emb|CBZ27101.1| putative farnesyl pyrophosphate synthase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 362
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 72/252 (28%), Gaps = 31/252 (12%)
Query: 11 ENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
E +++ + + LL A M L S + LGGK R V + A
Sbjct: 5 ERFQKVYEEVQEFLLSDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEAMAK 64
Query: 68 NHLTAL-------RVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + H + MD+ RRGKP ++ T +
Sbjct: 65 DAQMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDIMDHSKTRRGKPCWYLHPGVTTQVA 124
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------- 170
+GL+ A+ + ++++ + + +
Sbjct: 125 INDGLILLAWATQMALHYFADRPFLAEVLRIFHDVDLTTTIGQLYDVTSMVDSAKLDANV 184
Query: 171 ----------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGI 219
+ ++ G +++ + +K +G
Sbjct: 185 AHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTMEKVDKGATHKVAMVMGE 244
Query: 220 IFQLADDLLDCE 231
FQ+ DD++DC
Sbjct: 245 YFQVQDDVMDCF 256
>gi|330791598|ref|XP_003283879.1| farnesyl diphosphate synthase [Dictyostelium purpureum]
gi|325086150|gb|EGC39544.1| farnesyl diphosphate synthase [Dictyostelium purpureum]
Length = 384
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 26/250 (10%)
Query: 6 PSKLQENSKRI----DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF----- 56
+L++ + I+ +L M Q + + ++GGK R
Sbjct: 36 KEELKDFIDIFPILSNEIIREL---PGMDMPPQTVKWVEKLLETNVMGGKMNRGLTVLHS 92
Query: 57 --LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP----TVHIQ 110
L+ E L A +G +E + + L+ DDL +
Sbjct: 93 LQLLVEGRQLTRSEIFQANVLGWCVEWLQSFFLVADDLMDSSITRRGQPCWYRQPNPISN 152
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQ 163
IA N I K ++ +L L H Q +
Sbjct: 153 NGTPIGTIAVNDSFILESCIYILIKKYFRNEQYYADILDLFHETSYQTELGQLLDLTTQP 212
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQ 222
F T +++ +M + E + +G FQ
Sbjct: 213 NRGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMCGINSTPAFETAKDILLPMGEYFQ 272
Query: 223 LADDLLDCEE 232
+ DD LDC
Sbjct: 273 IQDDYLDCYG 282
>gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
Length = 335
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 27/235 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASL---- 64
+ I+ + ++L Q +++ + L+ GK IR+ +
Sbjct: 10 SYKQDIEKV-KEILAQQHFNVEPYQEKTEVLIQ------NNGKMIRALITILFGRYTLTV 62
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + T + I L +DN RRG T+ + I G+
Sbjct: 63 NQKNYDQETIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +++ + ++ + + + + + +
Sbjct: 123 ILFTKYFYLLT--SLAPSKEFIAYHSSAMEKVLTGELIQDAL---KFHKQTTLAEYYQAI 177
Query: 182 KMKTGALMCFACESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLDC 230
K KT L + SG + ++ E + FG NLG+ FQ+ DDL D
Sbjct: 178 KGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKDL 232
>gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
ATCC BAA-1163]
gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
ATCC BAA-1163]
Length = 335
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 27/235 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
+ I+ + ++L Q +++ + + L+ GK IR+ +
Sbjct: 10 SYKQDIEKV-KEILAQQHFNVEPYREKTEVLIQ------NNGKMIRALITILFGRYTLTV 62
Query: 65 --FNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + T + I L +DN RRG T+ + I G+
Sbjct: 63 NQKNYDQETIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +++ + ++ + + + + + +
Sbjct: 123 ILFTKYFYLLT--SLAPSKEFIAYHSSAMEKVLTGELIQDAL---KFHKQTTLAEYYQAI 177
Query: 182 KMKTGALMCFACESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLDC 230
K KT L + SG + ++ E + FG NLG+ FQ+ DDL D
Sbjct: 178 KGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKDL 232
>gi|331212589|ref|XP_003307564.1| hypothetical protein PGTG_00514 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297967|gb|EFP74558.1| hypothetical protein PGTG_00514 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 369
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 56/238 (23%), Gaps = 23/238 (9%)
Query: 21 DDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV---NHLTALRVG 76
D++ A + Y GGK R V + + +
Sbjct: 28 KDVVESARLENLPSDALDWFEANLEYNTPGGKLNRGTSVVDTLQILKGRELDSKEYHSAA 87
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
C+ M + + R + +V I + + A + K
Sbjct: 88 VLGWCVELLQAYFLVADDMMDHSLTRRGQPCWYKAPKVGNIAINDSFMLEASIYVLLKKH 147
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGALM 189
L+ + + +F E ++ +
Sbjct: 148 FRNHPAYVTLLELFHDTTYQTELGQLVDLLTAPEDSVDLSKFSVEKHHLIVVYKTSFYSF 207
Query: 190 CFACESGAIM------------AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +S + ++ LG FQ+ DD LDC D
Sbjct: 208 YLPVALAMRLHGITSPSDPGSTGSSSIDLYKQAMDILLPLGEYFQVQDDYLDCYGDSE 265
>gi|229915238|gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus]
Length = 279
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 70/174 (40%), Gaps = 11/174 (6%)
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
L L + A+ +A+ +H + H+ LP D+ +H YD
Sbjct: 59 PSLCVAACELVGGHRSKAIAAASALRLLHAANFTHEHLPLTDSPSPSP---VIHNSYDPS 115
Query: 115 TAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
++ + +L FE+++ Q + ++++ G +G+L GQ
Sbjct: 116 IQLLMPDAILPLGFELLAQSYNPAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSIS 175
Query: 173 DETQVFMIQKMKTG------ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ +V +++ + A GAI+ A++ E E+LR FG +G+I
Sbjct: 176 NGDEVDNAERVDCSGREKEGKMHACAAACGAILGDANEEETEKLRTFGLYVGMI 229
>gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial
[Apis mellifera]
Length = 310
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 12/215 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D ++ + + ++ LL Y L + GK+IR+ L + +G I
Sbjct: 3 KDKIVPYSRTGNKEEDEILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDII 62
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ +H SL+ DD+ DN +RRG P H Y + + A N + A E + +
Sbjct: 63 QLLHNASLLIDDIQ--DNSVLRRGIPVAHNIYGVASTMNAANYAIFIALEKVLALNHVEG 120
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + +L L G++ E + KTG L A +
Sbjct: 121 IQIYLEQLLELHRGQGME-----IYWRDNYICPTEAAYKQMTIQKTGGLFNLAVRLMQLF 175
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + L LG+ FQ+ DD + +
Sbjct: 176 SEC-KEDFVPLTSI---LGLYFQIRDDYCNLSSEE 206
>gi|190149251|gb|AAY33490.3| putative mitochondrial isoprenyl diphosphate synthase precursor
[Acyrthosiphon pisum]
Length = 394
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 170 NDGVLLEQAIYQLIKKYFKDKPYYTHILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EED 233
D
Sbjct: 290 YGD 292
>gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
Length = 307
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 82/230 (35%), Gaps = 21/230 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
++ K I + + + S ++ + K +RS L+
Sbjct: 3 EKQLKTIQNKIASWIKEIESGFIDALFSKIGPS--------KMLRSKLMLALLDEKTDAI 54
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
L + +D +RR P+++ + A++ G+ + AF
Sbjct: 55 LLDKAFNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFF 114
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+S + + + ++ I + + D+ + + I + KT M
Sbjct: 115 ELSKMGESIAKALSNAVLRLSRGEI-------EDVFVGESFNSDKQKYWRILEDKTAHFM 167
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ +S AI+ + + + FG N G+ FQ+ DDLLD +D L K
Sbjct: 168 EASLKSMAILLN---KDAKMYADFGLNFGMEFQIIDDLLDITQDANTLGK 214
>gi|15644283|ref|NP_229335.1| octoprenyl-diphosphate synthase, putative [Thermotoga maritima
MSB8]
gi|170288987|ref|YP_001739225.1| polyprenyl synthetase [Thermotoga sp. RQ2]
gi|46015919|pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
gi|46015920|pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
gi|4982102|gb|AAD36602.1|AE001800_12 octoprenyl-diphosphate synthase, putative [Thermotoga maritima
MSB8]
gi|170176490|gb|ACB09542.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
Length = 299
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|168031541|ref|XP_001768279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680457|gb|EDQ66893.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 360
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 14/231 (6%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNVNHL--- 70
+ L +L + + R + + Y + GGK R V L +
Sbjct: 27 VYQQLKKEILSDSELVTYTEESRAWVEEMLDYTVPGGKLNRGLSVVHSLELLKKDTPLSE 86
Query: 71 TALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYA 127
A+ + + MDN RRG+P + AI G L T+
Sbjct: 87 QDTFNACALGWCIEWLQGYFLVMDDIMDNSVTRRGQPCWYRVPKVGLIAINDGIILRTHI 146
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQK 182
++ Q + + + G + + +++ T + +++
Sbjct: 147 SRVLKRHFRQSPIYVELVDLFNDVEYQTASGQMLDLITTPAGEVDLSKYVLPTYLRIVKY 206
Query: 183 MKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE 232
++A + + E + +G FQ+ DD LDC
Sbjct: 207 KTAYYSFYLPVACALLLAGETSVAKFEAAKEVLVQMGTYFQVQDDYLDCYG 257
>gi|125810640|ref|XP_001361556.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
gi|195153687|ref|XP_002017755.1| GL17346 [Drosophila persimilis]
gi|54636732|gb|EAL26135.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
gi|194113551|gb|EDW35594.1| GL17346 [Drosophila persimilis]
Length = 419
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 60/227 (26%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ ++Y + GKK R L ++
Sbjct: 93 DLVRDITTVTKTYNCNDAAKWFAKVLQYNVPRGKKNRGILTVLTYKNLVPAEDLTPENIK 152
Query: 75 VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + MDN RRG+P H + I ++ A I
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 212
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
D + + L + EF E ++
Sbjct: 213 KMHFSHLDCYVALMELFHEITYITTCGQSLDQLNSHRSVSEFTMENYKAIVDNKTAYYSF 272
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 273 YLPFAVALHLAGYKDAEAFRQSKTILLEMGHFFQVQDDFLDCFGNPE 319
>gi|85103549|ref|XP_961541.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A]
gi|67476924|sp|Q92250|FPPS_NEUCR RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|18376241|emb|CAD21355.1| farnesyl-pyrophosphate synthetase [Neurospora crassa]
gi|28923088|gb|EAA32305.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A]
gi|206597129|dbj|BAG71669.1| farnesyl diohosphate synthase [Neurospora crassa]
Length = 347
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 68/236 (28%), Gaps = 16/236 (6%)
Query: 13 SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
K +++ L++ LL+ A + Q ++ LGGK R V + AS+
Sbjct: 7 LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILLG 66
Query: 68 NH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A + + + + E ++A N
Sbjct: 67 RPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFM 126
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--------DIQDEFIDETQV 177
I + K + + R L L H + Q +G D F +
Sbjct: 127 LESAIYTLLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYT 186
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ M A+ ++ LG FQ+ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNFG 242
>gi|71041845|pdb|1WL1|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima H74a Mutant
gi|71041846|pdb|1WL1|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima H74a Mutant
Length = 299
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVALASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 298
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+++L+++ + + + LL + + GK++R+ L+ + A + + L++ A +
Sbjct: 5 VENLMVEMVASLGDVRSVELL----HRVPKGKRLRAKLILKIAGVSEAS----LKLAAIV 56
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
E IH SL+HDD+ +D+ + RRG+ +++ + TAI+ G+ L + F ++ ++
Sbjct: 57 ELIHAASLLHDDV--IDDAFTRRGESSINALFGNKTAIMLGDILYSKGFSELTHMPQEVA 114
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + + L + + G ET F + KT +L+ + ++ A++
Sbjct: 115 FTISNAVALLSVGELLDVDLSHG-------FNESETLYFDMIYKKTASLIEASAKAAALL 167
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + +G+NLG+ FQ+ DD+LD +
Sbjct: 168 SGKNGDIYAL---YGKNLGLAFQIIDDILDITQSSE 200
>gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
Length = 281
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 9 EAKTTIDKLIEQFLNSNRDW-------DLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL DD+ +D RRG + Y I N L+ A I
Sbjct: 62 DSYGGALAIEILHSASLALDDIVDLDVT--RRGDKAAWVIYGNRKVIFITNYLIPTALRI 119
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D ++KTG+L
Sbjct: 120 IQTSYGDDALNTSIE-------------LWKDTSVGALRDMYDNNDYIRTIELKTGSLFK 166
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 167 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206
>gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
Length = 421
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+S++ + +G NLG+ FQ+ DD+LD +D K
Sbjct: 290 DSSKDIHKLYYDYGFNLGMAFQIIDDILDITQDSTK 325
>gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 389
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 73/243 (30%), Gaps = 24/243 (9%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------------GGKKIRSF 56
L +D +L L + RY GK IR
Sbjct: 58 LDRARTEVDPVLRAALGSL--------PGPMRRIARYHFGWEHADGSPAEGGAGKAIRPA 109
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV A+ + A V AA ++ MD RR +PT +
Sbjct: 110 LVLAAAAALGGSEARAGAVRAAAAVELVHNFTLLHDDVMDRDATRRHRPTAWTVFG-DEG 168
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I L + + + L+ + + + +
Sbjct: 169 AILAGDTLQALALRLLAQDPHPAAPAAAALLADCVVELCAGQYADTALERRGPADVTLDE 228
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
V + + KTGAL+ AC G + A A + L FG G+ FQL DD++ D
Sbjct: 229 VLAMAEAKTGALLGSACAIGGLYAGAGDADVAALDAFGREAGLAFQLIDDVIGIWGDPRR 288
Query: 234 LPK 236
K
Sbjct: 289 TGK 291
>gi|164661846|ref|XP_001732045.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
gi|159105947|gb|EDP44831.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
Length = 361
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 62/245 (25%), Gaps = 24/245 (9%)
Query: 12 NSKRID----TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV------TE 60
+R + I+++LL + M + + + Y GGK R V
Sbjct: 10 KRQRFEHVFSQIVEELLEFLKTQKMPEEASTWFKRNLEYNTPGGKLNRGLSVVDTVEILL 69
Query: 61 CASLFNVNHLTALRVGAAIECIHCYS------LIHDDLPSMDNGYIRRGKPTVHIQYDE- 113
C + + MD RRG P +
Sbjct: 70 CTDEHGQKTRELTESEYVQAAVLGWCVELLQAYFLVADDMMDASITRRGHPCWYRVDGVG 129
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLGGQMLDIQ 168
AI L + ++ + + + + + +
Sbjct: 130 NIAINDAFMLEAAIYHLLKTHFKSESYYGHLLELFHDVTFQTELGQLIDLITAPEDVVDL 189
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDL 227
+F E ++ M H + + + LG FQ+ DD
Sbjct: 190 SKFSPEKHRLIVVYKTAFYSFYLPVALAMRMCHVNDEAAFKHAQDILIPLGEYFQIQDDY 249
Query: 228 LDCEE 232
LDC
Sbjct: 250 LDCYG 254
>gi|49259558|pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
F132aL128AI123A Mutant
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++ + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEAGNNKARRAALNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|93278762|pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga
Maritima Octaprenyl Pyrophosphate Synthase
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S + +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAEHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
subunit 1 [Hydra magnipapillata]
Length = 186
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
KT +LM +C+S A++A+ S ++ +G+NLG+ FQL DD LD
Sbjct: 24 QRFNHYLTKTFRKTASLMANSCKSVALLANCSSIVQDMAFEYGKNLGMAFQLVDDALDII 83
Query: 232 EDLP 235
Sbjct: 84 SSSE 87
>gi|162538561|gb|ABY19312.1| farnesyl diphosphate synthase 1 [Myzus persicae]
Length = 394
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 170 NDGVLLEQAIYQLIKKYFKDKPYYTHILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EED 233
D
Sbjct: 290 YGD 292
>gi|63103171|gb|AAY33491.1| bifunctional putative mitochondrial GPPS/FPPS isorpenyl diphosphate
synthase precursor [Myzus persicae]
Length = 394
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 52 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKML 111
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 112 SSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 169
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 170 NDGVLLEQAIYQLIKKYFKDKPYYTHILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKY 229
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 230 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 289
Query: 231 EED 233
D
Sbjct: 290 YGD 292
>gi|170027724|ref|XP_001841747.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
gi|167862317|gb|EDS25700.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
Length = 380
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 62/239 (25%), Gaps = 9/239 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
S+ +E ++ DL + + A++Y + GKK R +
Sbjct: 42 KSESREFMAVFPDLVRDLTDYIKKYDEKVAAKWFARALQYNVPQGKKNRGLAAVLAYRML 101
Query: 66 NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+H +R + + + + + + A N
Sbjct: 102 AKSHELTPENIRRAHYLGWCIEMFQSVFLICDDVMDGSQTRRGQPCWYKVDDVKLTAVND 161
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-----QGMLGGQMLDIQDEFIDETQV 177
L I K Q D ++ + + I Q + ++ +
Sbjct: 162 ALMLDAAIFHVLKKQFGDEPYYNKLVEMFNEIKFITTVGQSLDLQSAKLDVTQYTMDLYK 221
Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ M + + +G FQ DD LDC D
Sbjct: 222 SIVSHKTAYYTFYLPVALAMHMTGFNDPEVFRQTKTILLEIGRFFQAQDDFLDCFGDPA 280
>gi|114618461|ref|XP_001135269.1| PREDICTED: hypothetical protein [Pan troglodytes]
Length = 298
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 54/208 (25%), Gaps = 12/208 (5%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DL 92
RL + Y +GGK R +V +L+ +
Sbjct: 12 RLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKQDADSLQWALTVGWYAELLQAFFLVAD 71
Query: 93 PSMDNGYIRRGKPTVHIQYDEV----TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
MD+ +G+ + + + I + ++ + + +
Sbjct: 72 DIMDSSLTCQGQISWYQKLGMGLDAINDAILLEACIYCLPKLYCREQPYYLNLMELFQQN 131
Query: 149 SLTHNIGLQG--MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN- 205
S IG + Q ++ +++ M+
Sbjct: 132 SYQTEIGQTLDLITTPQGNMDLHRCTEKRHKSVVKYKTAFYSFYLPVAVAMYMSRMDDKK 191
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
E + + FQ+ DD LD D
Sbjct: 192 EHTSAKKILLEIQEFFQIQDDYLDFFGD 219
>gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium
BAC17H8]
Length = 341
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 86/215 (40%), Gaps = 10/215 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
I+ +++ + ++ +A+ + GK +R+ + A NV+ AL A
Sbjct: 27 EIIHGFIIERMPKIGEPLSE---AALHHFASPGKMLRAKMALRAADHLNVDRYAALHWAA 83
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
AIE +H SLIHDD+ D +RR +P V Y A+ G+ L+ +FE+ + +
Sbjct: 84 AIEVLHNASLIHDDIC--DGDRLRRERPAVWSVYGRDVALTLGDWLVALSFELAAEAAQR 141
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + +++ + + ++D A + + A
Sbjct: 142 AQTPMLVKILATHMKTTTDGEAREFDVQPVRDWDHYLKGAGDKTAPLLTAPLEG-VAAMA 200
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + LG +Q+A+D+L+
Sbjct: 201 LHGGSAPIIGDCF----RALGNAYQIANDILNFSG 231
>gi|71041847|pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R90a Mutant
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFARGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|71041848|pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R91a Mutant
gi|71041849|pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R91a Mutant
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRAGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|147677775|ref|YP_001211990.1| hypothetical protein PTH_1440 [Pelotomaculum thermopropionicum SI]
gi|146273872|dbj|BAF59621.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 256
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 18/217 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASL 64
L + + I+ L + T L Y K +R LV + +
Sbjct: 2 LADILEPIEAEL-RYVSDLIEGHLTIKAGYLGDFAHLEFSYTD---KTVRPALVILSSRI 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + + + IH S +H + D+ R K + ++ G+ L
Sbjct: 58 YGLARQKTALLASVFQFIHMASKVHQGISENDSNLARVRKDP---RNASQFPVLVGDYLY 114
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F ++ ++++ + L+ L G+ + + + + +
Sbjct: 115 GKFFTLLCDAGMTGLLQPLAEIICQIHEGSILKKKLDGKSQNSH-------EFYEAVRKE 167
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
T L C GA MA A +++ L+ FG +LG+++
Sbjct: 168 TAELFAGCCTLGARMAGAPDKDQDLLKQFGRSLGMVY 204
>gi|323354370|gb|EGA86209.1| Erg20p [Saccharomyces cerevisiae VL3]
Length = 322
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 57/216 (26%), Gaps = 14/216 (6%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN------HLTALRVGAAIECIHC 84
M + D ++ Y GGK R V + ++ + +V CI
Sbjct: 1 MPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIEL 60
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
M + I R + EV I + + A +
Sbjct: 61 LQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSHFRNEKYYI 120
Query: 145 QLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + + +F + F++
Sbjct: 121 DITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLPVALAM 180
Query: 198 IMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+A + + ++ R LG FQ+ DD LDC
Sbjct: 181 YVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 216
>gi|62959203|gb|AAY23709.1| farnesyl diphosphate synthase [Roseobacter sp. JL-126]
Length = 147
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIRSQLM 147
HDD+P MDN +RRG+PT HI +DE TAI+AG+ L T AFE++S K + ++
Sbjct: 1 HDDMPGMDNDDLRRGQPTCHIAFDEATAILAGDALQTLAFELLSESPLGGLKAERQLSMV 60
Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ- 204
+L G GM GQ +D+Q + +++ ++ + + KTGAL+ A G +
Sbjct: 61 NALARASGSAGMCAGQAIDLQATGQHVNDHELEHMHRHKTGALIEAAATIGVLCGEEEAL 120
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
+ + F +LG+ FQ+ DD+LD E
Sbjct: 121 KWQPHFKEFATHLGLAFQVHDDILDVE 147
>gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25]
gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25]
gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A]
gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4]
Length = 281
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 9 EAKTTIDKLIEQFLNSNRDW-------DLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL DD+ +D RRG + Y I N L+ A I
Sbjct: 62 DSYGGALAIEILHSASLALDDIVDLDVT--RRGDKAAWVIYGNRKVIFITNYLIPTALRI 119
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D ++KTG+L
Sbjct: 120 IQTSYGDDALNTSIE-------------LWKDTSVGALRDMYDNNDYIRTIELKTGSLFK 166
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 167 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206
>gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured
bacterium MedeBAC46A06]
Length = 344
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 83/215 (38%), Gaps = 10/215 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
I+ D +++ M +A + GK +R+ + A L V+ AL A
Sbjct: 30 EIIHDFIIE---RMPQAGQPLAEAAAHHFASPGKMLRAKMALSAADLLKVDRPAALHWAA 86
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
AIE +H SLIHDD+ D +RRG+P V Q+ A+ G+ L+ +FE+ + +
Sbjct: 87 AIEVLHNASLIHDDIC--DGDRLRRGRPAVWSQFGRDVALTLGDWLVALSFELAAEAAQR 144
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + +++ + L + + D A + A
Sbjct: 145 AQTPMLVKILATHMKTTTLGEAREFDLQPVTDWQHYLQGAGDKTAPLLTAPIEGVATM-A 203
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ A+ LG +Q+ +D+L+
Sbjct: 204 LHGGAAPTIGACF----RALGNAYQIGNDILNFSG 234
>gi|330923188|ref|XP_003300141.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1]
gi|311325882|gb|EFQ91767.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1]
Length = 347
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 68/249 (27%), Gaps = 21/249 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ K +++ ++ H + D ++ Y +GGK R V + S
Sbjct: 1 MATTLKDFESVWPRIVADLQDHCKGYKLPQNCLDWFTKSLEYNTIGGKCNRGMSVVDTTS 60
Query: 64 LFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + MD+ RRG P ++
Sbjct: 61 ILQNKTLKPGSEEYFRAALLGWMIEFLQAFFLVSDDIMDSSKTRRGNPCWYLAPKVGMIA 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEF 171
+ + +L + I+ + + + L + + + D+F
Sbjct: 121 LNDSFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLDKF 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230
E F++ A + + +G FQ DD LD
Sbjct: 181 SLEKFTFIVIYKTAYYSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYLDA 240
Query: 231 EED---LPK 236
D L K
Sbjct: 241 FADPKVLGK 249
>gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653]
gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653]
Length = 468
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 15/221 (6%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + + + + + + + + L G+ R ++ L + + + A E +
Sbjct: 123 LTGLDAGARARLHRAVAAPLLHLLNNPGRSWRPYVAAAVLCLLDADPEPYRPLTAVTELL 182
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H +L+ DD+ R I L Y F+ + Q
Sbjct: 183 HLSALVIDDIQDDSPTRRGRPSVHEVFGTA---PAITAGTLGYYTFDALIQRVPQAAPET 239
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMCF 191
++ ++ + DE +V ++KTG L+
Sbjct: 240 MLRIYRLYLRDLRAAHAGQALDIAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRS 299
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
E A++ A + + + + + E +G +Q+ DD+ D
Sbjct: 300 TAEVSALLGGADERQLDAICRYFEAVGTAYQITDDVADLYG 340
>gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group]
Length = 356
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 65/227 (28%), Gaps = 13/227 (5%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-----NHLTALRVG 76
+LL + L S + Y +LGGK R V E + L +
Sbjct: 30 ELLKDPSFDFNDDAIQWLESMLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLA 89
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+ + + + + + +IA N L +I +
Sbjct: 90 CILGWGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRR 149
Query: 137 QLKDNIRSQLMLSLTHNIGLQ--------GMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+L L + + Q + + +++ +++
Sbjct: 150 YFCGKSYYVDLLDLFNEVEFQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYS 209
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ S + +++ +G+ FQ DD LDC +
Sbjct: 210 FYLPVACALLLFGESLDNYAQVKHILVEMGVYFQSQDDYLDCFGEPE 256
>gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 351
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 70/234 (29%), Gaps = 13/234 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN-VNHLT 71
R++ +L + + A A + + GK++R+ +
Sbjct: 14 RVEKVLHPFVAREADLFAAIDPALAPVAAQVEAVVADGKRLRAAFCYWGWRAAGQPDSDA 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQYDEVTAIIAGNGLL 124
+R A++E IH +++HDDL R + A +
Sbjct: 74 LVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIALRGAVRRRPRSVAAARSLAMLVG 133
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQ 181
+ T + + ++ G+ L+I + +I+
Sbjct: 134 DLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIAGECLEILRTGAEPDTAASLKVIR 193
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G +A A E +G LG FQL DDLL D
Sbjct: 194 YKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLGEAFQLRDDLLGLFGDPG 247
>gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
Length = 335
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 27/235 (11%)
Query: 11 ENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
+ I+ + ++L Q +++ + + L+ GK IR+ +
Sbjct: 10 SYKQDIEKV-KEILAQQHFNVEPYREKTEVLIQ------NNGKMIRALITILFGRYTLTV 62
Query: 65 --FNVNHLTALRVGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
N + T + I + +DN RRG T+ + I G+
Sbjct: 63 NQKNYDQETIFSIDQCAAAIELLHLATLVHDDVIDNAEKRRGLTTLQNFFGNKNTIYLGD 122
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L T F +++ + ++ + + + + + +
Sbjct: 123 ILFTKYFYLLT--SLAPSKEFIAYHSSAMEKVLTGELIQDAL---KFHKQTTLAEYYQAI 177
Query: 182 KMKTGALMCFACESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLDC 230
K KT L + SG + ++ E + FG NLG+ FQ+ DDL D
Sbjct: 178 KGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKDL 232
>gi|224010173|ref|XP_002294044.1| probable farnesyl pyrophosphate synthetase [Thalassiosira
pseudonana CCMP1335]
gi|220970061|gb|EED88399.1| probable farnesyl pyrophosphate synthetase [Thalassiosira
pseudonana CCMP1335]
Length = 360
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 65/257 (25%), Gaps = 25/257 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M K I+T L + L + ++ Q + + Y + GGK R
Sbjct: 1 MTSTDRDAFLAIYKEIETDLIADINKLPALSPTVKEQLTTYYSTCLPYTVPGGKMTRGLT 60
Query: 58 VTECAS------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
V + L V + A +G +E + + L+ DD+
Sbjct: 61 VIKGVEVLKGRILTEVEYKHAAILGWQVEWLQAFFLVADDIMDGSITRRGNPCWYKQPNV 120
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--- 168
+ AI L ++ + ++ + T G
Sbjct: 121 TQDNAINDALILENMIYQTLRRHFKGHPSYVQILELFIDTTYQTEIGQHIDTNGTPYADG 180
Query: 169 -------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN------EKERLRCFGE 215
F + ++ +C
Sbjct: 181 KRAELDLTRFTLDRYQGCVRYKTCYYSFYLSCALALAYCGYDPESGEGKELYANAEDVCM 240
Query: 216 NLGIIFQLADDLLDCEE 232
LG FQ+ DD+LD
Sbjct: 241 RLGEYFQIQDDVLDAFA 257
>gi|49259556|pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132aL128A
MUTANT
gi|49259557|pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132aL128A
MUTANT
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++ + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKARRAALNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|317150896|ref|XP_001823830.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
Length = 342
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 86/221 (38%), Gaps = 13/221 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
R++ + + +Q+ +H + L + Y GK IR+ L+ V +
Sbjct: 30 RVEESI-QVDIQSTTHTDDEKEKILTGPLDYLRENPGKDIRAKLIDAFNEFLEVPNDKLD 88
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ I+ +H SL+ DD+ ++ +RRG P H + I + N A +++
Sbjct: 89 VIKRIIDLLHNASLLIDDIQ--NSSTLRRGVPVAHSIFGVAQTINSANYAYFIAQRELTN 146
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
L +I ++ ++ L G++ + E + + KTG L A
Sbjct: 147 LTNPLSFSIYTEELIHLHRGQGME-----LHWRDTMQCPSEVEYIEMALDKTGGLFRLAI 201
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + + LG++FQ+ DD + + D
Sbjct: 202 RLMQAESASGTDYVPLVET----LGLLFQIRDDYQNLQSDT 238
>gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 351
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 70/234 (29%), Gaps = 13/234 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN-VNHLT 71
R++ +L + + A A + + GK++R+ +
Sbjct: 14 RVEKVLHPFVAREADLFAAIDPALAPVAAQVEAVVADGKRLRAAFCYWGWRAAGQPDSDA 73
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQYDEVTAIIAGNGLL 124
+R A++E IH +++HDDL R + A +
Sbjct: 74 LVRAAASLELIHAAAVVHDDLIDDSALRHGRPTAHIALRGAVRRRPRSVAAARSLAMLVG 133
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQ 181
+ T + + ++ G+ L+I + +I+
Sbjct: 134 DLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGRELIAGECLEILRTGAEPDTAASLKVIR 193
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ G +A A E +G LG FQL DDLL D
Sbjct: 194 YKTAKYTVEQPLLIGGALAGAGARLCEGYSAYGLPLGEAFQLRDDLLGLFGDPG 247
>gi|63103173|gb|AAY33492.1| bifunctional GPPS/FPPS isoprenyl diphosphate synthase precursor
[Myzus persicae]
Length = 362
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
+ ++ ++ DL + L ++Y + GGKK R + +
Sbjct: 20 KDETRDFMAVFPDVVRDLTDTGRNLDVPDVTKWLAKLLQYNVPGGKKNRGLALVLSYKML 79
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 80 SSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 137
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L +++I Q + + + +++
Sbjct: 138 NDGVLLEQAIYQLIKKYFKDKPYYTHILELFFDVTMKTAMGQCLDMLTANSFKSKKLEKY 197
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A + + +G FQ+ DD LDC
Sbjct: 198 TMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDC 257
Query: 231 EED 233
D
Sbjct: 258 YGD 260
>gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1]
Length = 368
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 12/201 (5%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+H + + + + Y L L GK +RS ++ + + I +H SL+ DD
Sbjct: 29 ARHEEIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDD 88
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ D+ +RRG P H + I A N ++ + + R+ + +
Sbjct: 89 IQ--DSSKLRRGLPVSHSIFGIAQTINAANYAF-----FLAQQELPKLGDARAFEIFTEE 141
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+G E + F + KTG L A + + + + ++ +
Sbjct: 142 LLHLHRGQGMDIYWRDASICPTEEEYFTMVSNKTGGLFRLAVKLMQLASESDKDYVPLVN 201
Query: 212 CFGENLGIIFQLADDLLDCEE 232
LG+IFQ+ DD L+ +
Sbjct: 202 V----LGVIFQIRDDYLNLQS 218
>gi|49259559|pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima
F132aL128AI123AD62A MUTANT
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A A + + + D + R + + D+
Sbjct: 58 EIGEAAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++ + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEAGNNKARRAALNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|46015922|pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima F132a Mutant
Length = 299
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAALNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|145344237|ref|XP_001416643.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576869|gb|ABO94936.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 348
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 55/225 (24%), Gaps = 14/225 (6%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-----RVGAAI 79
+ + + I Y + GK R V + + + +
Sbjct: 25 DEIDDRQVKIAVEWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVV 84
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + + + A N + + K K
Sbjct: 85 GWCIEFLQAYFLVADDIMDESVTRRGQPCWYRQPDVKMTAINDGILLEMMLYKCLKKYCK 144
Query: 140 DNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ L H++ Q + + ++ E + ++
Sbjct: 145 GLECYADLVELFHDVTYQTASGQLIDLITAPIGVVDLSKYTMEAYMRIVTYKTAFYTFYL 204
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + E+ LG FQ+ DD LDC D
Sbjct: 205 PAACAMRLCGVKDEAAYEKANEICIKLGQFFQIQDDYLDCYGDPE 249
>gi|121308574|dbj|BAF43673.1| geranyltranstransferase [Vibrio fischeri]
Length = 106
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 194 ESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ GA+ A + +L + + +G+ FQ+ DD+LD D
Sbjct: 1 QLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDIISDTE 43
>gi|19112126|ref|NP_595334.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe 972h-]
gi|74626740|sp|O59703|GGPPS_SCHPO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase; AltName:
Full=Sporulation-specific protein 9
gi|3135993|emb|CAA19054.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe]
Length = 351
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 15/247 (6%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT--E 60
G+ +L + + + ++L + ++LL +I+ LGGK R V
Sbjct: 9 NGIKKRLLDFFPVVLEGIREILESMQYF--PEETEKLLYSIKRNTLGGKNNRGLAVLQSL 66
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + R A + + MD RRG ++ AI
Sbjct: 67 TSLINRELEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYLVVGVRRAIN 126
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFID 173
L +I + + + G + F
Sbjct: 127 ESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTELGQQEDLLSSRDGEASLRSFDL 186
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F+I + + +++ +++Q + + LG FQ+ DD LDC
Sbjct: 187 MKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYDTTIKLSKLLGYYFQVQDDYLDCFG 246
Query: 233 D---LPK 236
D L K
Sbjct: 247 DYTVLGK 253
>gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta]
gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta]
Length = 338
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ++ ++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFSN-NKEDYSKLTAI---LGLYFQIRDDY 202
>gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase
gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase
gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Fspp And Ipp
gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Fspp And Ipp
gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp (P21)
gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp (P21)
gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Product Ggpp (P21)
gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Product Ggpp (P21)
gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp
gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ipp
gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Pyrophosphate And Fpp
gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Pyrophosphate And Fpp
gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-91
gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-91
gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-261
gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-261
gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-629
gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-629
gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-364
gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-364
gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-675
gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-675
gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-210
gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-210
gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ggpp (Inhibitory Site)
gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Ggpp (Inhibitory Site)
gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-749
gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-749
gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252 (P21)
gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252 (P21)
gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252
gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-252
gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-Sc01
gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-Sc01
gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-28
gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-28
gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-23
gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium And Bph-23
gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-806
gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-806
gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-742
gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Inhibitor Bph-742
gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-715
gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Bph-715
gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp And Bph-715
gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp And Bph-715
Length = 340
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 7/222 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
+++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 3 KNKMEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQ 61
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++
Sbjct: 62 LAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLV 119
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189
S T+ + + +G + + + KTG L
Sbjct: 120 SQLTTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 179
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 180 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 220
>gi|329767035|ref|ZP_08258563.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
gi|328837760|gb|EGF87385.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
Length = 113
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +KTG L+ + ++A + + E ++ FG+ LGI +Q+ DD+LD D K
Sbjct: 1 MHSLKTGRLIELPMDFACLVADKNCDY-EDVKEFGKQLGIAYQIKDDILDYYGDFEK 56
>gi|170096356|ref|XP_001879398.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645766|gb|EDR10013.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 364
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 59/232 (25%), Gaps = 20/232 (8%)
Query: 21 DDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN---HLTALRVG 76
++LL A M + + + Y + GGK R V + + + +
Sbjct: 20 EELLQHFAGEGMPVEAVEWYRKNLDYNVPGGKLNRGISVVDTVEILKGSALTEDEYFKAA 79
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
CI + + I R + E+ I + + A
Sbjct: 80 VLGWCIELLQAFFLVSDDIMDSSITRRSQPCWYRLPEIGMIAINDSFILEAAIYQLLKTH 139
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ L+ M + ++F + ++
Sbjct: 140 FRSEKFYVDLLELFHETTYQTEMGQLVDLITAPEDHVDLNKFSLDRHRSIVIYKTAYYSF 199
Query: 190 CFACESGAIM---------AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + +Q E + LG FQ+ DD LD
Sbjct: 200 YLPVACALHLLNIPESYTASGVTQKPYEISKSILLPLGEYFQIQDDFLDYSA 251
>gi|170115769|ref|XP_001889078.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164636026|gb|EDR00326.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 363
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 64/226 (28%), Gaps = 14/226 (6%)
Query: 21 DDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN--HLTALRVGA 77
D+L+ A M + + + + Y + GGK R V + + A
Sbjct: 20 DELIGHFAGEGMPEEAVEWYRNNLNYNVPGGKLNRGMSVVDTVEILKGRALDEDEYFKAA 79
Query: 78 AIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ + MD+ RR +P + T I + +L A +
Sbjct: 80 VLGWCIELLQAYFLVADDIMDSSITRRAQPCWYRLPSVGTVAINDSFMLEAAIYRLLKTH 139
Query: 136 TQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
+ + L L + + + +F ++
Sbjct: 140 FRGQAYYADLLDLFHETTYQTEMGQLVDLITAPEDKVDLSKFSLARHHTIVIYKTAYYSF 199
Query: 190 CFACESGAIMAH---ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + ++ + LG FQ+ DD LD
Sbjct: 200 YLPVACAMLFSNIPSSDEHIYAHAKSILLPLGEYFQIQDDFLDYSA 245
>gi|323450522|gb|EGB06403.1| hypothetical protein AURANDRAFT_59216 [Aureococcus anophagefferens]
Length = 313
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 49/206 (23%), Gaps = 3/206 (1%)
Query: 30 HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS--L 87
++ + + Y +GGK R +V E + +
Sbjct: 3 EVRPDEVAWIRRMLTYNCIGGKMNRGLMVVETGVVLFEAQGKPVTNDDLCRFAVLGWIIE 62
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ + + + + L + K + +
Sbjct: 63 MLQAWLLVADDMMDSSLTRRGQPCWYKVDGVGPMALNDAFLIEMVMFKVLKRHFGDAPEY 122
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NE 206
L + + + F + +++ G MA E
Sbjct: 123 AKLLDLLMETTLQTELGPALGPPFTLDRWTMIVKYKTAFYSFYLPVAMGMTMAGIDDRAE 182
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
+ R +G+ FQ DD LD
Sbjct: 183 YDAAREILVIMGVYFQAQDDYLDAFG 208
>gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex]
Length = 302
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 13/190 (6%)
Query: 43 IRYALLG-GKKIRSFLVTECASLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSM 95
Y G GK +R ++ A N + + A + +
Sbjct: 10 ASYHFDGDGKCLRPLVILCWAKAINFILKETSPKVIENQKKVAQVAEMVHGTCLYHDDVI 69
Query: 96 DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
D+ RR KPT++ + +I AG+ +L A E IS + ++++ ++
Sbjct: 70 DDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETISQISNNKVCILLTRMIQNVVTGEL 129
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+Q E +Q KT ++ + C++ ++A A + FG
Sbjct: 130 MQL------DAGATEEERFSQYIDKTFKKTASVFAYPCQAVLVLAGADATLQTTAFEFGR 183
Query: 216 NLGIIFQLAD 225
LGI +QL D
Sbjct: 184 QLGIAYQLVD 193
>gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus
kowalevskii]
Length = 310
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 12/195 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL Y + GK+IR L N+ +G ++ +H SL+ DD+ DN
Sbjct: 24 LLEPFHYLRQVPGKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNASLLIDDIE--DN 81
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y I N + A + + + + ++ +LSL G+
Sbjct: 82 SKLRRGIPVAHNIYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLLSLHEGQGM- 140
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L I + K + ENL
Sbjct: 141 ----DIWWRDAYVCPTEEEYKDMVIKKTGGLFGLGIRLMQIFS----ENKCDFKPLWENL 192
Query: 218 GIIFQLADDLLDCEE 232
G+ FQ+ DD + +
Sbjct: 193 GLYFQIRDDYANLKS 207
>gi|316954848|gb|EFV46383.1| decaprenyl-diphosphate synthase subunit 1 [Trichinella spiralis]
Length = 146
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ KTG+L + ++ A++A+ S+ + + FG N G++FQL DDLLD
Sbjct: 55 FSEYLTKCYKKTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLMFQLVDDLLDF 111
>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
Length = 298
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 11/208 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAI 79
DD+ + + + + + + L LF A+ +A+
Sbjct: 46 DDIDAHLRRVITIREPFSVFKPMHHLTFAAPETTAPALCIAACELFGGRRELAIAAASAL 105
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H S H+ +P D ++ G+G++ + E+++
Sbjct: 106 HLMHAASYFHEHIPLTDQTRPNSPPRPGPTFGPN-IELLTGDGMIPFGLELLAKSNNLDD 164
Query: 140 DNIR----SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-----QVFMIQKMKTGALMC 190
D+ Q+++ LT IG QG++ GQ + Q + + ++ K L
Sbjct: 165 DDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDESSPSVGKAGSTRIVTDKKGTELHA 224
Query: 191 FACESGAIMAHASQNEKERLRCFGENLG 218
GAI+ + E E+LR +G G
Sbjct: 225 CGAACGAILGGGKEKEIEKLRKYGFYAG 252
>gi|294790967|ref|ZP_06756125.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Scardovia inopinata F0304]
gi|294458864|gb|EFG27217.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Scardovia inopinata F0304]
Length = 392
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 78/269 (28%), Gaps = 43/269 (15%)
Query: 7 SKLQENSKRIDTILDDL----------LLQTASHMQTQHNDRLLSAIRYALL---GGKKI 53
+ L + + ID+ L +L + Q + + + + A+ GGK++
Sbjct: 2 NSLSFSKEDIDSRLLELVKESPAEGLPISQADADTRPSLPPYVDAVREQAVRSCQGGKRL 61
Query: 54 RSFLVTECASLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSM--------------- 95
R+ L+ A ++ + A+E +L+HDD+
Sbjct: 62 RAQLLGAVAQACGLSADLMPSALDLACALEIFQTAALVHDDIIDDSDTRRGAPSAHRALA 121
Query: 96 ---DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+ + I G L + + L
Sbjct: 122 NETGPEENLEKNSENNSEEKNHIGIGLGIMLGDILATLSVDVAHRSSRQFPQSYALLEAF 181
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMI--------QKMKTGALMCFACESGAIMAHASQ 204
+ + GQ++D+ E + T +I + I
Sbjct: 182 LDMHRQVEKGQIMDLAMESLPLTDPDLIEDQAKQTYWWKTSSYTTIAPLRLALIACGYDP 241
Query: 205 NEKERL-RCFGENLGIIFQLADDLLDCEE 232
+ + G LG+ FQL DD++D
Sbjct: 242 HTASSIAHQVGTPLGLAFQLNDDVIDIIS 270
>gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
okayama7#130]
gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
okayama7#130]
Length = 505
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231
+KT +LM S ++ + E E +G NLGI FQL DD+LD E
Sbjct: 299 WNIYLHKTYLKTASLMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYE 358
Query: 232 E 232
Sbjct: 359 S 359
>gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537]
Length = 255
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 16/221 (7%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+LQ S T + +AI+ L GK +R L + L + +
Sbjct: 1 MLQQVSSSWTIGFKDIDTAIKSQLNAGKLVRPALTLLFSELTD-EAYNENAITLGASVEL 59
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+ +D +RRG+ ++ ++ + TA+ +G+ LLT F +++ +
Sbjct: 60 LHLATLIHDDIIDESKLRRGQTSIQTRFGKDTAVYSGDYLLTGMFTLLNKVNNIEVNQYA 119
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ + + Q + + + + K KT AL + G IM+ +
Sbjct: 120 NESLKEILFGELSQK------QNRYRLDMTFDEYLLQIKGKTAALFRMSTLFG-IMSRPN 172
Query: 204 QNE---KERLRCFGENLGIIFQLADDLLDCE--ED---LPK 236
++ ++ GE +G+ FQL DD LD D L K
Sbjct: 173 DEINNFRDLMQKIGETMGMTFQLLDDYLDFSELGDNLALGK 213
>gi|189210164|ref|XP_001941414.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977507|gb|EDU44133.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 347
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 68/249 (27%), Gaps = 21/249 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ K +++ ++ H + D ++ Y +GGK R V + S
Sbjct: 1 MATTLKDFESVWPRIVADLQDHCKGYNLPQNCLDWFTKSLSYNTIGGKCNRGMSVVDTTS 60
Query: 64 LFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+ + + MD+ RRG P ++
Sbjct: 61 ILQNKTLEPGSEEYFRAALLGWMIEFLQAFFLVSDDIMDSSKTRRGNPCWYLAPKVGMIA 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEF 171
+ + +L + I+ + + + L + + + D+F
Sbjct: 121 LNDSFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLDKF 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230
E F++ A + + +G FQ DD LD
Sbjct: 181 SLEKFTFIVIYKTAYYSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYLDA 240
Query: 231 EED---LPK 236
D L K
Sbjct: 241 FADPKVLGK 249
>gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni]
gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni]
Length = 361
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 DELNSILQKTKDKSTQKEQDEILLQPFSYIQEIPGKQFRSELALAFNHWLLIPAEMLTQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATRVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|162286815|emb|CAP47201.1| putative geranylgeranyl diphosphate synthase [Aspergillus flavus]
Length = 340
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 12/211 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
Q ++ + + + Y L GK IR L+ + + + +H
Sbjct: 42 PQGSASTEVDKEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLKIPEDRLNIIAEIVGLLH 101
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ D+ +RRG P H + I + N A E + I
Sbjct: 102 TASLLIDDIQ--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIF 159
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ +L L G+ E + + KTG L A + + + +
Sbjct: 160 TEELLRLHRGQGM-----DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVT 214
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + LGIIFQ+ DD + + DL
Sbjct: 215 SDFLGLVD----LLGIIFQIRDDYQNLQSDL 241
>gi|225460953|ref|XP_002278023.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 298
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 64/208 (30%), Gaps = 11/208 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAI 79
DD+ + + + + + + L L A+ +A+
Sbjct: 46 DDIDAHLRRVIAIREPFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASAL 105
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H S H+ +P D ++ G+G++ + E+++
Sbjct: 106 HLMHAASYFHEHIPLTDQPRANSPPRPGPTFGPN-IELLTGDGMIPFGLELLAKSNNLDD 164
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---------VFMIQKMKTGALMC 190
D+ S +L + + G + + + ++ K L
Sbjct: 165 DDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDESSPSVGKAGSTRIVTDKKGTELHA 224
Query: 191 FACESGAIMAHASQNEKERLRCFGENLG 218
GAI+ + E E+LR +G G
Sbjct: 225 CGAACGAILGGGKEKEIEKLRKYGFYAG 252
>gi|308801677|ref|XP_003078152.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
gi|116056603|emb|CAL52892.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
Length = 346
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 58/225 (25%), Gaps = 14/225 (6%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-----ASLFNVNHLTALRVGAAI 79
+ + + + + I Y + GK R V + A+ L+ +
Sbjct: 23 DEVEDNQVSIAVEWIKRMIEYNVPHGKLNRGLAVVDGVRALKAANGEEPSADELKRAMVV 82
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+ + + + + A N + + K K
Sbjct: 83 GWCIEFLQAYFLVADDIMDESVTRRGQPCWYRQPDVKMTAINDGILLEMMLYKCLKKYCK 142
Query: 140 DNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ L H++ Q + + ++ E + ++
Sbjct: 143 GLECYHDLVELFHDVTYQTASGQLIDLITAPIGIVDLSKYTMEAYMRIVTYKTAFYTFYL 202
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + + LG FQ+ DD LDC D
Sbjct: 203 PAACAMRLCGVKDEAAYSKANEICIKLGQFFQIQDDYLDCYGDPA 247
>gi|261202778|ref|XP_002628603.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
gi|239590700|gb|EEQ73281.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
Length = 347
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
+ + + L+ + H + + + +++ GGK R V
Sbjct: 6 DRAAFEAVFPSLVKDISDHANQYGLPSIAREWFENSMNANTPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + + + I
Sbjct: 66 EKPLNDEQFKHLCTLGWMTEFLQAFFLVSDDMMDSSITRRGEPCWYRRPNVGMIAINDAF 125
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L A ++ ++ +L +T L + + ++ +
Sbjct: 126 MLEAAIYVLLKKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEYNVDLNNFSMDKF 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ ++A A+ + + LG FQ DD LD
Sbjct: 186 NFIVIYKTAYYSFYLPVVLALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular
pool of geranylgeranyl diphosphate [Pichia pastoris
GS115]
gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular
pool of geranylgeranyl diphosphate [Pichia pastoris
GS115]
gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435]
Length = 336
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 10/213 (4%)
Query: 26 QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
+ + +Y + GK R L+ V+H + + I+ +H
Sbjct: 6 SHDPKWSDEMEKLITEPYKYIKKVPGKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHN 65
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
SL+ DD+ D+ +RRG P H + I N + A + + R
Sbjct: 66 SSLMVDDVE--DSATLRRGIPATHNVFGIPQTINTANYMYFVAIQKAGTLGNH----ARV 119
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS- 203
+L +G E Q + KTG L ++ + +
Sbjct: 120 NDVLIEEMMNLHRGQGLDLYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPND 179
Query: 204 --QNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + L F LGI++Q+ DD L+ + D
Sbjct: 180 GVERKASSLVHFANLLGIVYQIRDDYLNLKSDQ 212
>gi|289619215|emb|CBI54483.1| unnamed protein product [Sordaria macrospora]
Length = 347
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 68/236 (28%), Gaps = 16/236 (6%)
Query: 13 SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
K +++ L++ LL+ A + Q ++ LGGK R V + AS+
Sbjct: 7 LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNALGGKCNRGMSVPDSASILLG 66
Query: 68 NH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
A + + + + E ++A N
Sbjct: 67 RPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYLQEGVGMVAINDAFM 126
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--------DIQDEFIDETQV 177
I + K K + R L L H + Q +G D F +
Sbjct: 127 LESAIYTLLKKYFKSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYT 186
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ M A+ ++ LG FQ+ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNFG 242
>gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
Length = 328
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IR++ S+ + + A V A + +D+ RRG T+
Sbjct: 51 GKFIRAY-GLMACSMDEEDKVPADAVTLASAVELLHLATLVHDDVIDDADTRRGIETLQK 109
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
++ + A+I G+ LL+ A + + + + + + + + Q ++ +
Sbjct: 110 RFGKKAAVICGDYLLSLALK----LASSIPQKNQYEALDMPNYLCRICMGELRQEINNGN 165
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + I K KT AL + GA+++ + + R G ++G+IFQL DD +D
Sbjct: 166 LDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYRKAGNDVGMIFQLMDDCID 225
Query: 230 C--EEDLPKK 237
EE KK
Sbjct: 226 YEMEETEAKK 235
>gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R]
gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R]
Length = 258
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
+KT +LM + ++ + E E +G NLGI FQL DD+LD E
Sbjct: 100 YLQKTYLKTASLMAKGARAAVVLGGCKEGEVWKEIAYAYGRNLGIAFQLVDDILDYES 157
>gi|71005854|ref|XP_757593.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
gi|46097004|gb|EAK82237.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
Length = 399
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 74/254 (29%), Gaps = 28/254 (11%)
Query: 6 PSKLQ-ENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
++L+ + KR +++ L+ + ++ M + D + Y GGK R V
Sbjct: 87 KAQLKIQKRKRFESVFPLLVEELTAYLTSEKMPAEAIDWFRRNLDYNTPGGKLNRGLSVV 146
Query: 60 E---------------CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ L +L A +G IE + Y L+ DD+ +
Sbjct: 147 DTVEILLCTDSDTGKISRELTEPEYLKAAILGWCIELLQAYFLVADDMMDASVTRRGQPC 206
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGM 159
++ AI L + ++ + + +
Sbjct: 207 W-YRVEGVGNIAINDAFMLEAAIYFLLKKHFRSDPYYGMLLELFHDVTFQTELGQLIDLI 265
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLG 218
+ +F + ++ MA + ++ +G
Sbjct: 266 TAPEDSVDLSKFSLQKHHLIVVYKTAFYSFYLPVALAMRMAGVTDETLYKQALDILLPMG 325
Query: 219 IIFQLADDLLDCEE 232
FQ+ DD LDC
Sbjct: 326 EYFQVQDDFLDCYG 339
>gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
Length = 289
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 17 EAKATIDRLIEQFLNSNRDW-------DLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 69
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL DD+ +D RRG + Y I N L+ A I
Sbjct: 70 DSYGGALAIEILHSASLALDDIVDLDAT--RRGDKAAWVVYGNRKVIFITNYLIPTALRI 127
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D + ++KTG+L
Sbjct: 128 IQTSYGDDALNTSIE-------------LEKDTSVGALRDMYDNSDYIRTIELKTGSLFK 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 175 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214
>gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[marine gamma proteobacterium HTCC2207]
gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[marine gamma proteobacterium HTCC2207]
Length = 339
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 77/219 (35%), Gaps = 17/219 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L +L L M L A RY GK R+ L +N L AA
Sbjct: 20 LAELELLYKREMPD-AQSTLAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDNLHWAAA 78
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
E +H SLIHDD+ D RRG+ ++H + A+ G+ ++ AFE+ +
Sbjct: 79 CELLHNASLIHDDIS--DASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGARNALYG 136
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + G Q E + I K KT L+ + AI
Sbjct: 137 GKLVTLLAQA------MQETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAAI 190
Query: 199 MAHASQN-------EKERLRCFGENLGIIFQLADDLLDC 230
A + E + L G+ +Q +D+ D
Sbjct: 191 AAGLNAEQNEKLNAELQSLEKLVGYCGLAYQGRNDIDDI 229
>gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens]
Length = 439
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 15/211 (7%)
Query: 24 LLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASL-------FNVNHLTALR 74
+ N L A + + GK+ R +V A + A +
Sbjct: 122 FSDNVKALVETENPVLSQAATMFFEQRHGKRFRPTIVALMAKALPVVHARDDAETCKAKQ 181
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ +D+ RRG +H Y A+++G+ LL A +++
Sbjct: 182 DRLGQITEMIHVASLIHDDVLDDADTRRGGDAIHKMYSNKVAVLSGDYLLARASVLLARL 241
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + + ++ + SL G Q D ++ + + +
Sbjct: 242 QHKQVVEVMAKALDSLLGKDGKQKKSEIAARDAKEMELYLRKSYYKTASLICDASKSC-- 299
Query: 195 SGAIMAHAS--QNEKERLRCFGENLGIIFQL 223
A++A +G +LG+ FQ+
Sbjct: 300 --ALLAGHDFDSATARAAEEYGYHLGLAFQI 328
>gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010]
gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010]
Length = 365
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 70/257 (27%), Gaps = 29/257 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVT 59
+ S L RI +D + ++ R AL+ GGK++R+ L
Sbjct: 2 TVSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLAL 61
Query: 60 ECASLFNVNHLTALRV-----------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ AIE +L+HDD+ + +
Sbjct: 62 HAFDATDPQGHDDDDAHARGRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAH-K 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
+ G GL +++++ + ++ M +
Sbjct: 121 ALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQV 180
Query: 168 ----------QDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKER-LRCFGE 215
+ + + + KT E + + G
Sbjct: 181 LDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGL 240
Query: 216 NLGIIFQLADDLLDCEE 232
LG FQLADDLLD
Sbjct: 241 PLGQAFQLADDLLDVIG 257
>gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
Length = 365
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 70/257 (27%), Gaps = 29/257 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVT 59
+ S L RI +D + ++ R AL+ GGK++R+ L
Sbjct: 2 TVSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLAL 61
Query: 60 ECASLFNVNHLTALRV-----------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
+ AIE +L+HDD+ + +
Sbjct: 62 HAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAH-K 120
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
+ G GL +++++ + ++ M +
Sbjct: 121 ALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQV 180
Query: 168 ----------QDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKER-LRCFGE 215
+ + + + KT E + + G
Sbjct: 181 LDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGL 240
Query: 216 NLGIIFQLADDLLDCEE 232
LG FQLADDLLD
Sbjct: 241 PLGQAFQLADDLLDVIG 257
>gi|316972597|gb|EFV56270.1| octaprenyl pyrophosphate synthase / phytoene synthase [Trichinella
spiralis]
Length = 272
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
++ KTG+L + ++ A++A+ S+ + + FG N G++FQL DDLLD
Sbjct: 181 FSEYLTKCYKKTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLMFQLVDDLLDF 237
>gi|34499413|ref|NP_903628.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
gi|34332897|gb|AAQ61620.2| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
12472]
Length = 379
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 28/259 (10%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTE 60
+P++L+ RID + + + + + Y GK++
Sbjct: 1 MPAELERLRGRIDECIAAAIESLREDGPERGHPLIGRVYGWLRHYLDCDGKRMHGIAAAL 60
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT-------------- 106
L V AA++ H ++L+HDD+ D
Sbjct: 61 AHLACGGGEDAILPVAAAMQLYHHHTLVHDDIYDEDAARRGWPTVHQAFAGWFADRRGSE 120
Query: 107 ---------VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
++ +TA G A ++ + L
Sbjct: 121 EGVGRVFSGGAMRRGAITAFAYGKICRALAGRLLLESGFDQAAVLDVARALERHEFFDNA 180
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
L + + + +KTG L +GA +A A + L +
Sbjct: 181 AQLKDVFHEGDEMPSPQA-CLDNAWLKTGRLFELCAYAGARLAGAEAGRTKALERWAGQS 239
Query: 218 GIIFQLADDLLDCEEDLPK 236
+ +QL DDL D K
Sbjct: 240 ALAYQLQDDLEDLNAASEK 258
>gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
Length = 318
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+L GGK R+ L+ ++ + T L + IE IH SL+HDDL +D
Sbjct: 21 PKLNKLYEDLFSGGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDL--ID 78
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
++RRGK ++Y A++AG+ LL +S ++++ L L
Sbjct: 79 RSHLRRGKTAAWLKYTPEYAVLAGDYLLARVMVNLSGHGNIKLVQYTAEVISDLLEGEWL 138
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGE 215
Q + G Q+ I +KT +L + + I + L G
Sbjct: 139 QDSVVGDFFVTM------EQLDRIHNLKTASLFKWCIRAPFIAQERYDEELHNILSEMGT 192
Query: 216 NLGIIFQLADDLLDCE--EDLPK 236
LG +FQ +DDLLD + D K
Sbjct: 193 LLGQLFQRSDDLLDYDIRNDEGK 215
>gi|332020707|gb|EGI61112.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 354
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 61/231 (26%), Gaps = 13/231 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTECASLFNVNH--LTALR 74
++ D+ + + ++Y + GKK R LV L + +R
Sbjct: 24 DVIRDIKEAIENCNIPDVAKWMEKVLQYNVPHGKKNRGLGLVYAYKLLVPSDQLTEENIR 83
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + + + + + A N I
Sbjct: 84 LARILAWCVELMQAYFSIMDDIEDQSLFRRGQLCWYRYDDLGLAAINDSFMLQGSIFYLI 143
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGML---------GGQMLDIQDEFIDETQVFMIQKMKT 185
+ K +L + + ++ + D F +I+
Sbjct: 144 QKHFKGKDCYVKLLEIFQDTIMKAAMGQSLDLLSTNFGNRPNLDLFTMNQYNSIIEFKTA 203
Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
C +A Q +G +FQ+ DD LDC D
Sbjct: 204 YYSTCLPVIVAMHLAGIKDQEMFREATTILTEIGCLFQIQDDYLDCYGDFE 254
>gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata]
Length = 332
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 6/211 (2%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L+++ + + + GK R+ L+ + ++ + +E +
Sbjct: 9 LIESPPAWSQSDENSINQPYNHIASNPGKNFRAKLIHLFNQFYLLDENIIQTLTQIVEIL 68
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SLI DD+ DN +RRG H+ Y +I N + A +++ + +
Sbjct: 69 HNSSLIIDDIE--DNSQLRRGVVASHMLYGVPMSINTANYMYFVAMDLLRNLSHDAVTSN 126
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMA 200
+ + +G + T+ + KTG L + ++
Sbjct: 127 DLMKIFNEELLYLHRGQGLDIYWRDSLPKVVPTEEMYFNMVMNKTGGLFRLTLKIMERLS 186
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
Q + + L G LGII+Q+ DD L+
Sbjct: 187 EYWQGQ-KSLVPLGNLLGIIYQVRDDYLNLT 216
>gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
Length = 276
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 6/221 (2%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
K DT+L+ L + ++ ++ Y GK IRS + V
Sbjct: 5 KLYDTLLERL--SSEWEWSQKNESCIMEPYTYITSNPGKDIRSQFIAAFNLWLTVPEEKT 62
Query: 73 LRVGAAIECIHCYSLIHDDL-PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ + +H SL+ DD+ + ++ + L +
Sbjct: 63 KAIARVVNMLHSASLLIDDIQDNSQLRRGSPVAHKIYGVPQTINTANYVYFLAFQEISKL 122
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ + +++ +G + E + + KTG L+
Sbjct: 123 REEDAKSRQGPDVDAIVTDELLSLHRGQGLDLFWRDSLQCPTEDEYIGMVNNKTGGLLRI 182
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +MA A+ N +G+ FQ+ DDLL+
Sbjct: 183 GIKL--MMAMATTNVSVNYVPLVNLIGVYFQIRDDLLNLSS 221
>gi|239612415|gb|EEQ89402.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ER-3]
gi|327355217|gb|EGE84074.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ATCC
18188]
Length = 347
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
+ + + L+ + H + + + +++ GGK R V
Sbjct: 6 DRAAFEAVFPSLVKDISDHANQYGLPSIAREWFENSMNANTPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + + + I
Sbjct: 66 EKPLNDEQFKHLCTLGWMTEFLQAFFLVSDDMMDSSITRRGEPCWYRRPNVGMIAINDAF 125
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L A ++ ++ +L +T L + + ++ +
Sbjct: 126 MLEAAIYVLLKKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLNNFSMDKF 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ ++A A+ + + LG FQ DD LD
Sbjct: 186 NFIVIYKTAYYSFYLPVVLALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|190345477|gb|EDK37369.2| hypothetical protein PGUG_01467 [Meyerozyma guilliermondii ATCC
6260]
Length = 388
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 69/246 (28%), Gaps = 16/246 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ K+ + + +DLL S+ M + + Y + GGK R V
Sbjct: 40 MDKDATRKV--FLNEFEPLREDLLDVIKSYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVV 97
Query: 60 ECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ ++ L+ + + + + +
Sbjct: 98 DTYAILKGKKVNELESDELKKVTILGWCVEMLQAFFLVADDIMDKAEKRRGHPCWYKKDG 157
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQMLDI 167
+IA N I K K +L L H+I + ++
Sbjct: 158 VGLIAINDSFVLEGAIYVVLKKYFKKEPYYVELLELFHDITFKTELGQFLDLIVEAEHQK 217
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADD 226
D+F + F+ +A + +++ LG+ FQ DD
Sbjct: 218 LDQFSMDKHDFVCIYKTAYYSFLLPVALAMYVAGIDSDEDMKQVHDVLIPLGLYFQNQDD 277
Query: 227 LLDCEE 232
LD
Sbjct: 278 FLDVYA 283
>gi|83772569|dbj|BAE62697.1| unnamed protein product [Aspergillus oryzae]
Length = 310
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 18/223 (8%)
Query: 13 SKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ ++ L D L + + T D L GK IR+ L+ V +
Sbjct: 1 MQALEAWLRDRGLQEAFEKILTGPLDYLRE------NPGKDIRAKLIDAFNEFLEVPNDK 54
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ I+ +H SL+ DD+ ++ +RRG P H + I + N A +
Sbjct: 55 LDVIKRIIDLLHNASLLIDDIQ--NSSTLRRGVPVAHSIFGVAQTINSANYAYFIAQREL 112
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
++ L +I ++ ++ L G++ + E + + KTG L
Sbjct: 113 TNLTNPLSFSIYTEELIHLHRGQGME-----LHWRDTMQCPSEVEYIEMALDKTGGLFRL 167
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A + + + + LG++FQ+ DD + + D
Sbjct: 168 AIRLMQAESASGTDYVPLVET----LGLLFQIRDDYQNLQSDT 206
>gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis]
gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis]
Length = 339
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + A++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-ANKEDYSKLTAI---LGLYFQIRDDY 202
>gi|115675636|ref|XP_781061.2| PREDICTED: similar to geranylgeranyl diphosphate synthase1
[Strongylocentrotus purpuratus]
gi|115959556|ref|XP_001186881.1| PREDICTED: similar to geranylgeranyl diphosphate synthase1
[Strongylocentrotus purpuratus]
Length = 427
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 75/221 (33%), Gaps = 23/221 (10%)
Query: 21 DDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV--- 75
DD+ ++ ++ + + L+ Y L + GK++R+ L ++ ++
Sbjct: 9 DDVTENQSALIREKKQEMILMEPYNYILQVPGKQVRTKLSRAFNCWMDIPEDNIKKIRKL 68
Query: 76 ---------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
I + D+ +RRG P H Y I + N +
Sbjct: 69 IYLFIFEKLSILSTYIEVLHYSYRIDDIEDSSKLRRGIPVAHSIYGIAQTINSANYMYFL 128
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + I ++ ++ L G+ E + + KTG
Sbjct: 129 GLKEVMQFDHPDAMKIFTEQLVLLHQGQGM-----DIYWRDSYTCPTEEEYKEMVIKKTG 183
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
L A + + A++++ + L LG+ FQ+ DD
Sbjct: 184 GLFGLAVRLMQLFS-ANKSDFKPLSDI---LGLYFQIRDDY 220
>gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 11379]
Length = 349
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 64/190 (33%), Gaps = 3/190 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + + A+E IH +SLIHDD+ D RR
Sbjct: 60 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 119
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
L + + + L + Q +L
Sbjct: 120 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 179
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KTG+L+ A GA +A A + E L G ++G+ FQ DDLL
Sbjct: 180 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 239
Query: 230 CEED---LPK 236
D K
Sbjct: 240 IWGDPQVTGK 249
>gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
15998]
Length = 348
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 64/190 (33%), Gaps = 3/190 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + + A+E IH +SLIHDD+ D RR
Sbjct: 59 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 118
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
L + + + L + Q +L
Sbjct: 119 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 178
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KTG+L+ A GA +A A + E L G ++G+ FQ DDLL
Sbjct: 179 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 238
Query: 230 CEED---LPK 236
D K
Sbjct: 239 IWGDPQVTGK 248
>gi|148270387|ref|YP_001244847.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
gi|147735931|gb|ABQ47271.1| Polyprenyl synthetase [Thermotoga petrophila RKU-1]
Length = 298
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 28/235 (11%)
Query: 1 MNGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M L +L++ +RI+ IL + ++ L GK +R L
Sbjct: 1 MKNRLNQNSCELEKVKERIEQILSRFFPE--------------QIMKDLPLYGKMLRVRL 46
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A + + + +D RRGK T++ Y + A+
Sbjct: 47 SILSFKNRGVEISEDAISSLAALELVHLASLL-HDDVIDGARFRRGKETINFMYGDKAAV 105
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ +L AF + ++ ++ ++ + + + I + +
Sbjct: 106 AAGDLVLVSAFYTVEEIGNDRLRRTFLNVIRRMSEAELIEQL-------SRYKPITKEEY 158
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+I + K+GAL A + A+ E L G +G I+Q+ DD++D
Sbjct: 159 LLIVEGKSGALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 210
>gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796]
Length = 292
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 1 MEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 59
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++S
Sbjct: 60 VSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQL 117
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
T+ + + +G + + + KTG L
Sbjct: 118 TTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLT 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 178 LRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 215
>gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
NRRL 15998]
Length = 323
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 64/190 (33%), Gaps = 3/190 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + + A+E IH +SLIHDD+ D RR
Sbjct: 34 GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDIMDGDETRRRRPTLWKAY 93
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
L + + + L + Q +L
Sbjct: 94 GTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQLAGALGDLVHGQAQDLLFESRPWSGP 153
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KTG+L+ A GA +A A + E L G ++G+ FQ DDLL
Sbjct: 154 GAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAFQAVDDLLG 213
Query: 230 CEED---LPK 236
D K
Sbjct: 214 IWGDPQVTGK 223
>gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus
Af293]
gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
fumigatus Af293]
gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
fumigatus A1163]
Length = 357
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 76/201 (37%), Gaps = 12/201 (5%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ + + + Y GK IR L++ + + + +H SL+ DD+
Sbjct: 67 DDKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDIQ 126
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ +RRG P H + I + N +A + + I ++ ML L
Sbjct: 127 --DSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRG 184
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
GL E + + KTG L A + + +H +++ +
Sbjct: 185 QGL-----DLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMESHNTEDCVPLVD-- 237
Query: 214 GENLGIIFQLADDLLDCEEDL 234
LGIIFQ+ DD + + DL
Sbjct: 238 --LLGIIFQIRDDYQNLQSDL 256
>gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina
98AG31]
Length = 429
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--------QNEKERLRCFGENLGIIF 221
+ +KT +LM ++ + K+ + FG++LGI F
Sbjct: 255 NHQIWNEYLEKSYLKTASLMAKTARCATVLGGCGIHQGWEEGEKIKDGVYQFGKHLGIAF 314
Query: 222 QLADDLLDCEED---LPK 236
Q+ DD+LD L K
Sbjct: 315 QIIDDVLDYTSSASVLGK 332
>gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
Length = 314
Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 12/197 (6%)
Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ +++LL Y L + GK+IR L + VG + +H SL+ D
Sbjct: 15 DKEQDEKLLQPFTYILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLID 74
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ DN +RRG P H Y + I A N +L A E + S + ++ +L L
Sbjct: 75 DIQ--DNSILRRGIPVAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLEL 132
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G++ E + + KTG L A + + ++
Sbjct: 133 HRGQGME-----IYWRDNFICPSEAEYRTMTIRKTGGLFNLAVRLMQLFSDCKED----F 183
Query: 211 RCFGENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 184 TPLAGILGLYFQIRDDY 200
>gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 378
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 74/227 (32%), Gaps = 12/227 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIRSFLVTECASLFNVN 68
+L+ + + + + Y+ GGK +R L CA +
Sbjct: 44 RELVRPALAETVGRLHPWVGEMAAYSFGWCDVGGTPAEGAGGKGVRQALAVLCAEAAGAS 103
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
A+ A+E +H +SL+HDD+ D R L
Sbjct: 104 GEAAVAGAVAVELVHTFSLLHDDIMDGDQTRRTRPTVWKAYGTGPAVLAGDALFALAVEA 163
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
R + L +L + + + + KTGAL
Sbjct: 164 LAAVPGAGAAAAVRRLSVALGDLVRGQADDLLFESRPWTGATAVGPEEYRRMAEHKTGAL 223
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A GA +A A ++ L G ++G+ FQ+ADDLL D
Sbjct: 224 LGCAAALGAALAGAPESTAAALDRAGRHMGVAFQVADDLLGIWGDPA 270
>gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a]
Length = 335
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 1 MEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 59
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++S
Sbjct: 60 VSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQL 117
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
T+ + + +G + + + KTG L
Sbjct: 118 TTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLT 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 178 LRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 215
>gi|307203134|gb|EFN82314.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator]
Length = 402
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 58/233 (24%), Gaps = 14/233 (6%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
I+ D+ + + + L + Y + GGK R+ + +
Sbjct: 74 DIVRDIAIASEELNLPDVTEWLTKVLEYNVPGGKNTRALTLLYAYQMLTPADRMTRENIY 133
Query: 78 AIECIHCYSLIHDDL-----PSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEII 131
+ + D IRR + + + AI + + ++
Sbjct: 134 LARILAWCMELLQGFLLILDDIEDRSLIRRKQLCWYRHENVGLAAINDAVMIENVMYYLL 193
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGML----GGQMLDIQDEFIDETQVFMIQKMKTGA 187
+ I L G D F + +
Sbjct: 194 RKHFKGRECYIDILETFQEIMMKTLMGQCLEFTNFGKTLDLDRFTMDRYDGIAYYKTAYY 253
Query: 188 LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A S+ E R +G +Q+ DD L C + L K
Sbjct: 254 TFVLPMSVAMHFAGIKSRELFEEARTILTKIGHFYQIQDDYLSCYGNRKTLGK 306
>gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231
T +KT +LM S ++ + E + +G NLGI FQL DD+LD E
Sbjct: 267 WTVYLQKTYLKTASLMAKGARSAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYE 326
Query: 232 E 232
Sbjct: 327 S 327
>gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3]
Length = 301
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 1 MEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 59
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++S
Sbjct: 60 VSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQL 117
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
T+ + + +G + + + KTG L
Sbjct: 118 TTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLT 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 178 LRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 215
>gi|226468294|emb|CAX69824.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
Length = 176
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENL 217
+ + D+ KT +L+ +C++ A++ SQ + + FG++L
Sbjct: 1 MMQLSTNSDDDDKRFQAYLTKTYRKTASLIANSCKAVAMLTVPTLSQRHIDDMYDFGKHL 60
Query: 218 GIIFQLADDLLDCEEDLPK 236
G+ FQL DD+LD D K
Sbjct: 61 GMAFQLIDDVLDFVTDEAK 79
>gi|300705868|ref|XP_002995273.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
gi|239604252|gb|EEQ81602.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
Length = 301
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 7/201 (3%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+++LS I Y +GGK R+ L S N L+ + + +
Sbjct: 22 NKILSFITYNTVGGKGYRAELFNLIISDINSTELSLKTSCVYELLQSAFIVA----DDVM 77
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + R + + + + L++ + + + + + + +
Sbjct: 78 DESLIRRGVECYYRKKGLICLKYAQYLISALGKYLRMVRGENERSP-LRATYYNCILDTC 136
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
G + ++E+ E +I+ SG + + E L + +
Sbjct: 137 LGQILDSKKKSKEEYSVELYNRIIEYKTAIYTFYLPLVSGYLFSGR--KEPSCLYEYCKI 194
Query: 217 LGIIFQLADDLLDCEEDLPKK 237
+G+IFQ+ DD L+ +L KK
Sbjct: 195 IGMIFQMQDDYLNFFPELSKK 215
>gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus
Solfataricus Hexaprenyl Pyrophosphate Synthase
Length = 289
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 23/221 (10%)
Query: 11 ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
E ID +++ L L+ Y L GK+ R L +
Sbjct: 17 EAKATIDRLIEQFLNSNRDW-------DLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 69
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
+ AIE +H SL D+ +D RRG + Y I N L+ A I
Sbjct: 70 DSYGGALAIEILHSASLALCDIVDLDAT--RRGDKAAWVVYGNRKVIFITNYLIPTALRI 127
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
I + N + + + + D + ++KTG+L
Sbjct: 128 IQTSYGDDALNTSIE-------------LWKDTSVGALRDMYDNSDYIRTIELKTGSLFK 174
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ A A N K+++ G+ LGII+Q+ DD +D +
Sbjct: 175 LSTVLSAY-ASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214
>gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
Length = 321
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 19/224 (8%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
+I++ L+ + + + + + + Y GK R+ LV A L
Sbjct: 11 KIESDLERVKKMMIAEISVSNPEIKAKIMDYINASGKFARAGLVLMFARLNQKTISQEKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA + + + +D RRG H+ AI AG+ LL YA +
Sbjct: 71 NIAAGIELFHLATLI-HDDVIDEADQRRGIQAFHLAESNRIAIYAGDYLLAYAMRFL--- 126
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
Q L+ I + + ++ I + A
Sbjct: 127 ---------YQSGLNDFSGIEQKTIELILNGELNQLKNVADPTMTIYRYLRQIKGKTALL 177
Query: 195 SGAIMAHA------SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
G S+ + ++ GE +G+ FQL DD LD +
Sbjct: 178 FGLATVGGYQTESISRRQLKQAYYAGEEIGMAFQLIDDQLDFFQ 221
>gi|328717612|ref|XP_001950423.2| PREDICTED: farnesyl pyrophosphate synthase-like [Acyrthosiphon
pisum]
Length = 396
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 80/245 (32%), Gaps = 17/245 (6%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
+ + ++ DL + + L + ++Y + GGK R + +
Sbjct: 54 KDEFENFMAVFPELVKDLTDTSLKLNVPDATEWLENLLKYNVPGGKNNRGLTLVTSFKML 113
Query: 66 N-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
+ N + +G +E + Y L+ DD+ MDN RRG+P + D A+
Sbjct: 114 STPSDLTYENLRLSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAV 171
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
G L ++++ + Q + + +++
Sbjct: 172 NDGILLEQAIYQLLKKYFKDKPYYTHIVELFYDVTMKSAMGQCLDMLTAKSFKSTKLEKF 231
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ +A Q ++ + +G FQ+ DD LDC
Sbjct: 232 TMDNYIAIVKYKTAYYSFFLPVFLAMRMTNINDQEIFKQSKAILLEMGQFFQVQDDYLDC 291
Query: 231 EEDLP 235
+
Sbjct: 292 YGNPE 296
>gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi]
gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi]
Length = 337
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 DELNGILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GEIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFVCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + A++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-ANKEDYTKLTAI---LGLYFQIRDDY 202
>gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c]
gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName: Full=BET2 suppressor
protein 1; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces
cerevisiae]
gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae]
gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae]
gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae
YJM789]
gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291]
gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118]
gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c]
gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB]
gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 335
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 1 MEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 59
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++S
Sbjct: 60 VSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQL 117
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
T+ + + +G + + + KTG L
Sbjct: 118 TTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLT 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 178 LRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 215
>gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
[Monodelphis domestica]
Length = 299
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 74/200 (37%), Gaps = 12/200 (6%)
Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
+Q LL RY L L GK++R+ L V + E +H SL
Sbjct: 2 EEVQKTSERILLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNASL 61
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ DN +RRG P H Y + I + N + E + + + ++ +
Sbjct: 62 LIDDIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQL 119
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
L L GL E + + KTG L A + ++ ++ K
Sbjct: 120 LELHQGQGL-----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSNYKEDLK 174
Query: 208 ERLRCFGENLGIIFQLADDL 227
L LG+ FQ+ DD
Sbjct: 175 PLLDT----LGLFFQIRDDY 190
>gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
Length = 161
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
N + Q+ + ++ IL L + +T + A+ Y+L+ GGK+IR L+ E
Sbjct: 26 NHSVEEGFQKRREEVEAILTTFLPEEKGPAKTG-----IEAMNYSLMVGGKRIRPILLRE 80
Query: 61 CASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LF A+E IH +SL HDDLP+MDN RRGK ++ E
Sbjct: 81 AFLLFAGEERQKLFLPLTEAFMLAMEMIHSFSLCHDDLPAMDNDKYRRGKEATWYRFTEA 140
Query: 115 TAIIAGNGLLTYAFEII 131
I+AG+ L YAF+ +
Sbjct: 141 QGILAGDSLSLYAFQWV 157
>gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli]
Length = 371
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 88/240 (36%), Gaps = 19/240 (7%)
Query: 4 GLPSKLQENSKR---IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
G P L ++SK I T+ +L + Q+N + + Y L GK IRS L+
Sbjct: 40 GFPRLLSDSSKAPSTIRTV--QVLEDDVDDIAIQYNKIVRGPLDYLLAIPGKDIRSKLID 97
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V I +H SL+ DD+ D +RRGKP H Y I +
Sbjct: 98 SFNIWLQLPEEKLSIVKDIINLLHTASLLIDDIQ--DASRLRRGKPVAHDVYGVAQTINS 155
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
N + I ++ +L L G+ E +
Sbjct: 156 ANYAYYLQQARLKEIGDPRAFEIFTRSLLDLHLGQGM-----DLYWRDMVVCPTEEEYTR 210
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
+ KTG L A + I + + + E LG+IFQ+ DD ++ + L KK
Sbjct: 211 MVMYKTGGLFNLALDLMRIQSRKNTD----FSKLVELLGVIFQIRDDYMNLQSGLYAEKK 266
>gi|281412693|ref|YP_003346772.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
gi|281373796|gb|ADA67358.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
Length = 299
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 28/235 (11%)
Query: 1 MNGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
M L +L++ +RI+ IL + ++ L GK +R L
Sbjct: 2 MKNRLNQNSCELEKVKERIEQILSRFFPE--------------QIMKDLPLYGKMLRVRL 47
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V A + + + +D RRGK T++ Y + A+
Sbjct: 48 SILSFKNRGVEISEDAISSLAALELVHLASLL-HDDVIDGARFRRGKETINFMYGDKAAV 106
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
AG+ +L AF + ++ ++ ++ + + + I + +
Sbjct: 107 AAGDLVLVSAFYTVEEIGNDRLRRTFLNVIRRMSEAELIEQL-------SRYKPITKEEY 159
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+I + K+GAL A + A+ E L G +G I+Q+ DD++D
Sbjct: 160 LLIVEGKSGALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13]
Length = 335
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 7/219 (3%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ +D+L+ +Q+ + + LL GK R L+ + + N+
Sbjct: 1 MEAKIDELINN-DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAI 59
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
V +E +H SL+ DD+ DN +RRG+ T H+ + + I N + A +++S
Sbjct: 60 VSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQL 117
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
T+ + + +G + + + KTG L
Sbjct: 118 TTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLT 177
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
++ S + L F LGII+Q+ DD L+ +
Sbjct: 178 LRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNLK 215
>gi|49409613|gb|AAT65717.1| geranylgeranyl diphosphate synthase [Aspergillus flavus]
Length = 340
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 12/211 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
Q ++ + + Y L GK IR L+ + + + +H
Sbjct: 42 PQGSASTPVDKEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLH 101
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ D+ +RRG P H + I + N A E + I
Sbjct: 102 TASLLIDDIQ--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIF 159
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ +L L G+ E + + KTG L A + + + +
Sbjct: 160 TEELLRLHRGQGM-----DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVT 214
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + LG+IFQ+ DD + + DL
Sbjct: 215 SDFLGLVD----LLGVIFQIRDDYQNLQSDL 241
>gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum
CQMa 102]
Length = 331
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 12/205 (5%)
Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
S + + + + + Y L L GK +RS +++ + + I +H SL
Sbjct: 30 SSIAAGYEEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPVDKLEVIKRIIMLLHNASL 89
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ D+ +RRG P H + I A N A + + I ++ +
Sbjct: 90 LIDDIQ--DSSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTEEL 147
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
LSL G+ + E + F + KTG L A + + + +
Sbjct: 148 LSLHRGQGM-----DIYWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNCDFV 202
Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
+ LG+IFQ+ DD L+ +
Sbjct: 203 PLVNV----LGVIFQIRDDYLNLQS 223
>gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
Length = 304
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
M L + +ID L L + + + YA+L GGK++R L
Sbjct: 1 MT-NLKNFQAIWRPKIDQQLQTDL------IAISDDAEFAQMMCYAVLNGGKRLRPLLTL 53
Query: 60 ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
S FNV+ L ++ A+E +H YSL+HDDLP+MDN RRG+P+VH ++ E +AI+
Sbjct: 54 AVLSSFNVSVTPNLLKLATAVEWVHSYSLVHDDLPAMDNDLWRRGQPSVHAKFGESSAIL 113
Query: 119 AGN------GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
G+ + +++ ++ D ++ L+ G GM+ GQ+
Sbjct: 114 VGDALLTGAFQVVSEANALAANVQKVSDEQVITIIRQLSRYAGANGMVIGQIH-DMQNHG 172
Query: 173 DETQVF-------MIQKMKTGALMCFACESGAIMAH------ASQNEKERLRCFGENLGI 219
+ + KT AL+ +A + G ++ + L FG + G+
Sbjct: 173 HQKSDVTYDWLLNDVYAPKTAALISYATDIGGKLSQEMASTLVHPKTQYDLYQFGYDFGL 232
Query: 220 I 220
Sbjct: 233 A 233
>gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 387
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 67/203 (33%), Gaps = 13/203 (6%)
Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ + Y L K IR + S V ++ + + I +H SL+ DD+ DN
Sbjct: 103 VKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DN 160
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
RRG PT H + I + N AFE + ++ + + + +L GL
Sbjct: 161 SVPRRGSPTTHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQGL- 219
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ + KTG + + R F L
Sbjct: 220 ----DLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLL 274
Query: 218 GIIFQLADDLLDCEE----DLPK 236
G FQ+ DD + D K
Sbjct: 275 GRYFQIRDDYQNLTSAEDLDEGK 297
>gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
Length = 325
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 6/217 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
D ILD L + +L + GK+IR L+ NV +
Sbjct: 5 DNILDRL--SREPEWSPEFESAILEPFTFTTSNPGKEIRGKLIDAFNLWLNVPDDKLQVI 62
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ +H SL+ DD+ + A E+ +
Sbjct: 63 AKIVNMLHAASLMVDDIEDDSQLRRGNPVAHKIYGIPQTINS-ANYVYFLAFQELFALRN 121
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
M++ +G + + E Q + KTG L+ +
Sbjct: 122 GPTPPRQDIDQMVTQELLSLHRGQGLEILWRDSLQCPTEEQYIDMVSNKTGGLLRLGIKL 181
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + G+ FQ+ DDL++ +
Sbjct: 182 MMACSTTNSDV--DYTPLVSLFGVYFQIRDDLMNLQS 216
>gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba]
gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba]
Length = 338
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + ++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-TNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
Length = 311
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 73/213 (34%), Gaps = 9/213 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L +L M + ++A + GK R+ L ++ L A
Sbjct: 2 DWLAELNAVYQREMPHSPSSLAVAAKYHFTHPGKSFRAQLALSSGCSLGLSTTDNLHWAA 61
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
A E +H SLIHDD+ D RRG+ ++H + A+ G+ ++ AFE+ +
Sbjct: 62 ACELLHNASLIHDDIS--DASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGARNSQH 119
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ G Q + + I KT L+ A
Sbjct: 120 GSVLVALLAQAMQATCSG------QIADISQRQCAGLDEWQCIATGKTAPLLIAPIRGAA 173
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ A + + L G+ +Q +D+ D
Sbjct: 174 VAAGL-KADLSGLEHLVGLCGLAYQGRNDIDDI 205
>gi|66815947|ref|XP_641990.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4]
gi|74849279|sp|Q9NH03|FPS_DICDI RecName: Full=Farnesyl diphosphate synthase; Short=Dfps; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Geranyltranstransferase
gi|7188788|gb|AAF37872.1| farnesyl diphosphate synthase [Dictyostelium discoideum]
gi|60469988|gb|EAL67969.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4]
Length = 382
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 70/249 (28%), Gaps = 25/249 (10%)
Query: 6 PSKLQENSKRI----DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF----- 56
+L + + + IL +L M Q + I + GGK R
Sbjct: 35 KEELADFVEIFPILTNEILKEL---PGMDMPPQTIAWVEKMINVNVSGGKMNRGLTVLHS 91
Query: 57 --LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM------DNGYIRRGKPTVH 108
L+ E L A +G +E + + L+ DD+ + R+ P +
Sbjct: 92 LQLLVEGRQLSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITRRGQPCWYRQANPISN 151
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
AI L + + +I + T L +
Sbjct: 152 NGTIGSIAINDSFILESCIYILIKKYFRNEPYYADILDIFHETSYQTELGQLLDLTTQPN 211
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQL 223
F T +++ +MA S + +G FQ+
Sbjct: 212 RGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMAGITSTPAFSTAKDILLPMGEFFQV 271
Query: 224 ADDLLDCEE 232
DD LDC
Sbjct: 272 QDDFLDCYG 280
>gi|194752870|ref|XP_001958742.1| GF12410 [Drosophila ananassae]
gi|190620040|gb|EDV35564.1| GF12410 [Drosophila ananassae]
Length = 417
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 59/227 (25%), Gaps = 9/227 (3%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ ++Y + GKK R L ++
Sbjct: 91 DLVRDITSVTKAYNCNDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 150
Query: 75 VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ + MDN RRG+ H I ++ A I
Sbjct: 151 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQLCWHKVEGVGLTAINDALMIENAMYAIL 210
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
D + + L + EF E +++
Sbjct: 211 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRNVSEFTMENYKAIVENKTAYYTF 270
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+A + + +G FQ+ DD LDC +
Sbjct: 271 YLPFAVALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 317
>gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST]
gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST]
Length = 249
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
++ +D + RRGKP+V++ +++ AG+ +L +++ + I
Sbjct: 5 MIHTASLVHDDVIDQSFARRGKPSVNVLWNQQQVAQAGDYILAVVSMMLARLQHNDVTLI 64
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
S+++ L +Q + + + KT +L+ + ++ A++
Sbjct: 65 LSEILADLVQGELMQLDTKETENERFAHYFARS------YRKTASLIANSLKAVAVLTGV 118
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ E +G NLG+ FQL DDLLD
Sbjct: 119 GERTAEISFQYGRNLGLAFQLVDDLLDFVSSAE 151
>gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae]
gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae]
Length = 338
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|17481248|dbj|BAB79206.1| farnesyl diphosphate synthase [Rhodovulum sp. CP-10]
Length = 144
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG+PTVH+++D+ TA++ G+ L T AF++++ P +R L+ SL G+ GM+
Sbjct: 13 RRGQPTVHVKWDDGTALLVGDALQTLAFDLLADPACHPDPGVRIDLVASLARASGIDGMV 72
Query: 161 GGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
GQ DI E ++ +Q KTGAL+ ++ E+GA + A L +
Sbjct: 73 LGQAQDIAAETAGRPLTLAEITELQANKTGALIRWSAEAGARLGRAD---IAPLSSYATA 129
Query: 217 LGIIFQLADDLLDC 230
LG+ FQ+ADD+LD
Sbjct: 130 LGLAFQIADDILDA 143
>gi|294942867|ref|XP_002783701.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
ATCC 50983]
gi|239896273|gb|EER15497.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
ATCC 50983]
Length = 223
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + KT +L A E AI+A FG + G+ FQ+ DD+LD E
Sbjct: 57 PHFKRYILKSFYKTASLFASAMECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLDVE 116
Query: 232 EDLP 235
D+
Sbjct: 117 MDVE 120
>gi|317150999|ref|XP_001824349.2| hypothetical protein AOR_1_1410094 [Aspergillus oryzae RIB40]
Length = 585
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 73/202 (36%), Gaps = 12/202 (5%)
Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
Q + + + Y L GK IR L+ + + + +H SL+ DD+
Sbjct: 296 QSDQIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDI 355
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
D+ +RRG P H + I + N A E + I ++ +L L
Sbjct: 356 Q--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHR 413
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
G+ E + + KTG L A + + + + + +
Sbjct: 414 GQGM-----DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVD- 467
Query: 213 FGENLGIIFQLADDLLDCEEDL 234
LGIIFQ+ DD + + DL
Sbjct: 468 ---LLGIIFQIRDDYQNLQSDL 486
>gi|322785241|gb|EFZ11944.1| hypothetical protein SINV_01791 [Solenopsis invicta]
Length = 320
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 13/207 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ Y + GKK R+ + L + +R + +
Sbjct: 14 VLEYNVPKGKKTRALTLVYAYKLLAPSDQLTEENIRAVRILAWCVEVMQAFFLVIDDIQD 73
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+ + +IA N + I + K +L H+ L+
Sbjct: 74 GSLLRRGQPCWYRNNNIGLIAINDGIMLENSIYYLIQKYFKGKDYYVNLLETFHDTILKT 133
Query: 159 MLGG---------QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKE 208
++G D F +++ + A +
Sbjct: 134 LMGQCLDLLSTNLNKKPNLDLFTINRYNSIVEYKTAYYSFILPVTAAMQSAGIKDPEMYK 193
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + +G +FQ+ DD LDC D
Sbjct: 194 QAKTILLEMGHLFQVQDDYLDCFGDTE 220
>gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
Length = 556
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
+D+ RRG P+ ++++ A++AG+ LL A ++ + + + +
Sbjct: 313 HDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRNAEVVELLSTVIANL 372
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + +KT +L+ +C + A++ A +
Sbjct: 373 VEGEFMQLKNTARDETNPVWSEATLQYYLQKTYLKTASLISKSCRAAALLGGADAQTVDA 432
Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
+G+NLG+ FQL DD+LD +DL K
Sbjct: 433 AYAYGKNLGLAFQLVDDMLDYTRSAKDLGK 462
Score = 35.6 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 19/70 (27%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
+ + L+ + + H +A Y GK +R +V +
Sbjct: 146 VAKEMKYLIGDVRKLLGSGHPSLDRAAKYYTQAEGKHMRPLIVLLMSRATFQCPKAPPSQ 205
Query: 76 GAAIECIHCY 85
E +
Sbjct: 206 AQLSEAQADW 215
>gi|258514899|ref|YP_003191121.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257778604|gb|ACV62498.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 260
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 19/223 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + S +++ + + ++ L+ A H+ + + + S I YA IR LV
Sbjct: 1 MVNQVFSSIKKELENVYQKIERELVIKAGHISSFAHLK-HSVIDYA------IRPALVIF 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F L + A + IH + +H D+ I + G
Sbjct: 54 SGRMFGRLSEKTLALAAVCQFIHMAAQVHVDVNEQSTAQIPGQEHDP----------RDG 103
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--F 178
+ + + + L I Q GG + + ++QV
Sbjct: 104 SQFPVLVGDYLYGKFFTTLCDYGIVNFLKPLSEIICQINEGGLLRQKEINSKVKSQVVAR 163
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + +T L C A A A +E L FG+N G+ +
Sbjct: 164 DVVRRETAELFAGCCSLAAESAEAGSSECLALYKFGKNFGMAY 206
>gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
Length = 538
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D+ RRG +H ++ +I++G+ LL A I + + S ++ SL
Sbjct: 283 HDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGTGSPKICRSFSYVVESL 342
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + + +E + + K + FAC AI++ + +
Sbjct: 343 IKG---EFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFAC--IAILSFKNDTIIQLC 397
Query: 211 RCFGENLGIIFQLADDLLDCEED 233
G ++G+ FQL DD LD + D
Sbjct: 398 FNLGLHIGMAFQLYDDYLDYKID 420
>gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis]
gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis]
Length = 296
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 74/197 (37%), Gaps = 12/197 (6%)
Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ LL +Y L L GK+IR+ L NV + E +H SL+ D
Sbjct: 5 KEVSERILLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLID 64
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ DN +RRG P H Y + I + N + E + + ++ +Q +L L
Sbjct: 65 DIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLLEL 122
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
GL E + + KTG L A + + ++ K L
Sbjct: 123 HRGQGL-----DIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQLFSSNDKDLKPLL 177
Query: 211 RCFGENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 178 NT----LGLFFQIRDDY 190
>gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208]
Length = 206
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 13/207 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
+I+S+ + +++ + + + QM + + KT L
Sbjct: 125 KILSAHASSVENIEFNSKNIEK-----ILMGELDQMRTSYKTNVTVREYLTRISGKTAQL 179
Query: 189 MCFACESGAIMAHASQNEKERLRCFGE 215
+C SGA + A++ + G
Sbjct: 180 FALSCYSGATGSKATRMTVAKCYNIGH 206
>gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine
bacterium 66A03]
Length = 338
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 7/210 (3%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
S + + + +A + GK++R+ + F + L +A+E +
Sbjct: 28 FNQFFNSILPSNKHPLSAAATHHFSSKGKQLRAKIALSAGEKFGADDAACLHWASAVELL 87
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SLIHDD+ D IRR +V +Y A+ G+ ++ AF+ +
Sbjct: 88 HNASLIHDDIC--DGDTIRRNNASVWAKYGRDIALALGDWMIAEAFQQAAKAAHVSNSFN 145
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + L + D + I KT L A E A +A
Sbjct: 146 LVTKLSNHVKSTIAGQALEFDNAL----YPDIDKYLEISAGKTAPLFVAAIEGIAEIAGR 201
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S E + + +GI +Q A+D+ +
Sbjct: 202 S-ELIEEINHYFVTMGICYQFANDIQNILG 230
>gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans]
gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans]
Length = 326
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 6/214 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L + L A H ++ L Y GK R+ L+ S + + +
Sbjct: 7 LIEELANEAPHWTSEEESNLRRPFDYLTSSPGKNFRAELIQIFNSFYELPDHRIAIISKL 66
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+E +H SL+ DD+ D+ RRG H+ Y I N + YA E +
Sbjct: 67 VETLHTSSLLIDDIE--DSSEWRRGLKAAHLVYGVPMTINTANYMYFYAMECLKELGNGC 124
Query: 139 KDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
D ++L++ + +G E + + KTG L
Sbjct: 125 DDLSLNKLLIIFNEEMMDLHRGQGLDIYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLM 184
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + S + + L LGI++Q+ DD ++
Sbjct: 185 EVFS-PSFSGAKSLVPLSNLLGILYQIRDDFMNL 217
>gi|146419671|ref|XP_001485796.1| hypothetical protein PGUG_01467 [Meyerozyma guilliermondii ATCC
6260]
Length = 388
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 68/246 (27%), Gaps = 16/246 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
M+ K+ + + +DLL + M + + Y + GGK R V
Sbjct: 40 MDKDATRKV--FLNEFEPLREDLLDVIKLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVV 97
Query: 60 ECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ ++ L+ + + + + +
Sbjct: 98 DTYAILKGKKVNELESDELKKVTILGWCVEMLQAFFLVADDIMDKAEKRRGHPCWYKKDG 157
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-------GMLGGQMLDI 167
+IA N I K K +L L H+I + ++
Sbjct: 158 VGLIAINDSFVLEGAIYVVLKKYFKKEPYYVELLELFHDITFKTELGQFLDLIVEAEHQK 217
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADD 226
D+F + F+ +A + +++ LG+ FQ DD
Sbjct: 218 LDQFSMDKHDFVCIYKTAYYSFLLPVALAMYVAGIDSDEDMKQVHDVLIPLGLYFQNQDD 277
Query: 227 LLDCEE 232
LD
Sbjct: 278 FLDVYA 283
>gi|313619071|gb|EFR90878.1| geranyltranstransferase [Listeria innocua FSL S4-378]
Length = 94
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
+ +RLR F EN+GI FQ++DD+LD D KK
Sbjct: 1 EQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKK 36
>gi|242015532|ref|XP_002428407.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
corporis]
gi|212513019|gb|EEB15669.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
corporis]
Length = 403
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 68/239 (28%), Gaps = 16/239 (6%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLL----SAIRYALLGGKKIRSFLVTECASLF 65
++ ++ I DL+ + L ++Y + GGKK R + L
Sbjct: 64 KDEAREFMGIFPDLVRSITDSIGHNDGPELARWCTKLLQYNVPGGKKNRGLALVVTYKLL 123
Query: 66 NVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
N A +G IE + LI DD+ R + A+
Sbjct: 124 KKNVSKEEIYLAQIMGWCIEILQAKLLIADDIMDNSLTRRGRPCWYLTHDLGTK-ALNDA 182
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDET 175
L F+++ I + G + ++F
Sbjct: 183 LLLGGSLFQVLKMYFKDKSYYINILELFHDVMLKTFLGQHLDTHTSLDISKDLNKFTMAR 242
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + + + MA + + +G FQ+ DD LDC D
Sbjct: 243 YNLICKYKTSYYSFVLPIAAAMFMAGIDDHELHRQAKTILLEMGHFFQVQDDYLDCFGD 301
>gi|47225367|emb|CAG11850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 61/231 (26%), Gaps = 40/231 (17%)
Query: 45 YALLGGKKIRSFLVTEC-------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
Y + GGK+ R V + L AL VG IE + + L+ DD+
Sbjct: 72 YNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDIMDASV 131
Query: 98 GYIRRGKP------------------------TVHIQYDEVTAIIAGNGLLTYAFEIISS 133
+ + + + A N I
Sbjct: 132 TRRGQPCWYKKVTLDPCLKSGIVLGLSVPFYLPCVFAFQDGIGLDAINDSFLLESSIYRL 191
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDETQVFMIQKMKT 185
+ + +L L Q M + F + +++
Sbjct: 192 LRRHCRGQPYYIHLLELFTETSFQTELGQTLDLMTAPPGQIDLNRFTMDRYKAIVKYKTA 251
Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +A S+ E + +G FQ+ DD LDC D
Sbjct: 252 FYSFYLPVAAAMYIAGITSEEEHNNAKHILLEMGEFFQIQDDYLDCYGDPA 302
>gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 372
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 12/204 (5%)
Query: 30 HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ + + + + Y L + GK IR L++ ++ V I+ +H SL+
Sbjct: 69 QITEPYEKIVSAPLEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLL 128
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ D +RRG P H + I A N + ++ +I +Q +L
Sbjct: 129 IDDIQ--DASRLRRGHPVAHDVFGVAQTINAANYAYFLQQKRLNEINDPRAFHIFTQALL 186
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L G+ E + + KTG L A E I + + +
Sbjct: 187 DLHIGQGM-----DLYWRDALVCPTEAEYTRMVMYKTGGLFRLAVELMQIQSTTTTD--- 238
Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
L LGIIFQ+ DD ++ +
Sbjct: 239 -LSRLVGLLGIIFQIRDDYMNLQS 261
>gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus]
gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus]
gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus]
Length = 236
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL RY L L GK++RS L V + E +H SL+ DD+ D+
Sbjct: 12 LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus]
gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus]
gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus]
gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus]
Length = 300
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL RY L L GK++RS L V + E +H SL+ DD+ D+
Sbjct: 12 LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis]
gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis]
Length = 337
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 DELNGILQKTKDKSTQREQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPPEKLTQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GEIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + ++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFSE-NKEDFTKLTAI---LGLYFQIRDDY 202
>gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase
[Bifidobacterium bifidum NCIMB 41171]
Length = 359
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 69/252 (27%), Gaps = 33/252 (13%)
Query: 13 SKRIDTILDDLLLQT-----ASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASL 64
I++ + D + + ++ R AL+ GGK++R+ L
Sbjct: 1 MALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALHAFDA 60
Query: 65 FNVNHLTALRV-----------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
+ AIE +L+HDD+ + +
Sbjct: 61 TDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAH-KALGTT 119
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI------ 167
+ G GL +++++ + ++ M +
Sbjct: 120 SHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQVLDLAV 179
Query: 168 -----QDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKER-LRCFGENLGII 220
+ + + + KT E + + G LG
Sbjct: 180 ELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQA 239
Query: 221 FQLADDLLDCEE 232
FQLADDLLD
Sbjct: 240 FQLADDLLDVIG 251
>gi|169139097|gb|ACA48701.1| farnesyl diphosphate synthase 1 [Myzus persicae]
Length = 394
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 17/206 (8%)
Query: 43 IRYALLGGKKIRSFLVTECASL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
++Y + GGKK R + + + N + +G +E + Y L+ DD+ M
Sbjct: 89 LQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--M 146
Query: 96 DNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTH 152
DN RRG+P + D A+ G L +++I
Sbjct: 147 DNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLIKKYFKDKPYYTHILELFFDVTMK 206
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEK 207
Q + + + +++ + + ++ +A
Sbjct: 207 TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVCLAMRMTNINDPEIF 266
Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
+ + +G FQ+ DD LDC D
Sbjct: 267 RQAKTILLEMGHFFQVQDDFLDCYGD 292
>gi|89276803|gb|ABD66600.1| putative farnesyl-diphosphate synthetase [Tuber borchii]
Length = 347
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 64/242 (26%), Gaps = 18/242 (7%)
Query: 9 LQENSKRIDT-----ILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECA 62
+ + + I+ +L+ + +++ + + + LGGK R V E
Sbjct: 1 MATTRAQFEEVFTNVIIPELIAEVKKTQISENVIQWIERNFLHNTLGGKYNRGMTVPETY 60
Query: 63 SLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L C + + + R + V I
Sbjct: 61 RLLTGKETLSLAEYKLSAILGWCTELLQAMFLVADDIMDSSKTRRGSPCWYLMEGVGNIA 120
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEF 171
+ L + + K + L+ + + + F
Sbjct: 121 INDSFLLESSIYVLLKKYFKGTDYYIDLVELFHDVTWKTELGQLVDLLTSPEDSIDLNRF 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ F+++ A A+ + R R LG FQ+ DD LDC
Sbjct: 181 NYDKYYFIVRYKTAFYSFYLPVALAMHQAGIATPDNLTRARDVLIPLGEYFQVQDDYLDC 240
Query: 231 EE 232
Sbjct: 241 YG 242
>gi|328793605|ref|XP_623586.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
Length = 359
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 18/224 (8%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALRVG 76
L + + N+ + Y + G + RS + L N +A +
Sbjct: 33 LTENNNQELQDVNEWTAKVLEYNVPKGGRRRSISLIVAYKLLASQDQLTEENIHSARILA 92
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
+E + ++ DD+ +D+ +RR +PT H++ A+ + T +++
Sbjct: 93 WCMEILQAVYIVMDDI--IDHTDMRRNQPTWHVKIGLS-AVNDVLLIETCIYDLFKKYFK 149
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT-------GALM 189
I + S H +QG ++ +F + + T
Sbjct: 150 SKDCYIDILNLFSKYHKKTVQGECLDVLISTDWGKKSNLDLFSMDRYNTIVKHKTSYYSF 209
Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A ++ +G +FQ+ DD LDC
Sbjct: 210 VLPFVLAMRFAGITDPEIYKQAEKILLKIGHLFQVRDDYLDCYA 253
>gi|46137163|ref|XP_390273.1| GGPP_GIBFU Geranylgeranyl pyrophosphate synthetase (GGPP
synthetase) (GGPPSASE) (Geranylgeranyl diphosphate
synthase) [Gibberella zeae PH-1]
Length = 416
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + Y + GK R+ L+ + +V + + +
Sbjct: 112 EDLEFTAKRSWNGDKESVVRGPYDYVISHPGKDFRAQLIAAFNAWLDVPAPSLEVITRVV 171
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 172 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSANYIYFVALQELHKLGNPEL 229
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I S +++L G+ E + KTG L + A
Sbjct: 230 ITIFSDELVNLHRGQGM-----DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLGIKLMAEE 284
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A+ + + +G+IFQ+ DD ++
Sbjct: 285 ANGPTDCVPLV----NLIGLIFQIRDDYMNLSS 313
>gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL]
gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii]
Length = 540
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D RRG ++H +Y +I++G+ LL A + +S S ++ SL
Sbjct: 284 HDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFASIGYPEICKRFSYVIESL 343
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + + ++ + + K + FAC AI++ + E
Sbjct: 344 IKG---EFLQTNLNYNNIEDALKTYLIKSYHKTASLFSHLFAC--IAIISFQNDKITELC 398
Query: 211 RCFGENLGIIFQLADDLLDCE 231
G ++G+ FQL DD LD +
Sbjct: 399 FNLGLHIGMAFQLYDDYLDYK 419
>gi|171693897|ref|XP_001911873.1| hypothetical protein [Podospora anserina S mat+]
gi|170946897|emb|CAP73701.1| unnamed protein product [Podospora anserina S mat+]
Length = 349
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 18/247 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLV 58
M + LQE + + L+++LL+ A + ++ +GGK R V
Sbjct: 1 MAAPQKTTLQEF-ESVFPKLEEVLLEHAKSYNLPEKELAWYKKSLEINAVGGKCNRGMSV 59
Query: 59 ------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
L + + +G E + + L+ DD+ MD+ RRGKP +
Sbjct: 60 PDSVSLLLGRPLTEDEYFKSATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRHEG 117
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDE 170
I +L A + + +L +T + +
Sbjct: 118 VGMVAINDAFMLEAAIYTLLKKYFRDHPRYVDLLELFHEVTFQTEMGQLCDLLTAPEDVV 177
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLAD 225
+D + + + ++ ++ A+ ++ LG FQ+ D
Sbjct: 178 NLDNFSMEKYRFIVIYKTAYYSFYLPVALSLLLLDIATPANLKQAESILIPLGEYFQIQD 237
Query: 226 DLLDCEE 232
D LD
Sbjct: 238 DYLDNFG 244
>gi|240277524|gb|EER41032.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H143]
gi|325093604|gb|EGC46914.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H88]
Length = 347
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
N +++ L+ + H + + + +I GGK R V
Sbjct: 6 NRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + + + I
Sbjct: 66 EKPLNDEQFKNLCTLGWMTEFLQAFFLVSDDIMDSSVTRRGEPCWYRRPNVGMIAINDAF 125
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L ++ ++ +L +T L + + +D +
Sbjct: 126 MLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLDNFSMDKF 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + + LG FQ DD LD
Sbjct: 186 NFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina
98AG31]
Length = 366
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 78/209 (37%), Gaps = 3/209 (1%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
L+ + LL Y + GK+IRS ++ V + + +H
Sbjct: 50 LEALDIWPESNEQILLEPYTYLTNIPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLH 109
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ D+ +RRG P H Y I N + A++ ++ K L+ +
Sbjct: 110 TASLLMDDVE--DDSDLRRGVPVTHKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDAT 167
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ L + + G L +D T+ +Q + F ++A +
Sbjct: 168 TDLWSLVNDELLQLHRGQGMDLYWRDSLTCPTEEEYLQMVNNKTGGLFRIAIKLMIALSP 227
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
E +GIIFQ+ DDLL+
Sbjct: 228 IPETPDYLPLVNLVGIIFQIRDDLLNLSS 256
>gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni]
gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma
mansoni]
Length = 338
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 30 HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
++ Y GK IRS LV V + I+ +H SLI
Sbjct: 9 EFDKTAEKVVMEPYSYICSTNGKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLI 68
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ D ++RRGKPT H + +I + N A E +S + I ++ ML
Sbjct: 69 IDDIE--DGSHLRRGKPTAHCIFGVAPSINSANYAYFLALEKLSLLERPETVKIFTEQML 126
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
L G+ + E++ + KTG L + + + K
Sbjct: 127 VLHRGQGM-----DIFWRSSFKCPSESEYEAMVLCKTGGLFSLGVRLMQLFSENQTDYKP 181
Query: 209 RLRCFGENLGIIFQLADDL 227
L +G+ +Q+ DD
Sbjct: 182 LLD----AIGLFYQIRDDY 196
>gi|322705366|gb|EFY96952.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium
anisopliae ARSEF 23]
Length = 337
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 16/212 (7%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S + + + + + Y L L GK +RS +++ + + + +H
Sbjct: 28 LHSSIAAGYEEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPADKLEVIKRIVMLLHNA 87
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D+ +RRG P H + I A N A + + I ++
Sbjct: 88 SLLIDDIQ--DSSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTE 145
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-- 203
+LSL G+ + E + F + KTG L A + + +
Sbjct: 146 ELLSLHRGQGM-----DIYWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNWF 200
Query: 204 ---QNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ L LG+IFQ+ DD L+ +
Sbjct: 201 VFHTRDFVPLVNV---LGVIFQIRDDYLNLQS 229
>gi|213510982|ref|NP_001135248.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
gi|209155246|gb|ACI33855.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
Length = 309
Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 13/203 (6%)
Query: 27 TASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
M + +R LL +Y L L GK++R+ L NV + E +H
Sbjct: 1 MDGDMDSAGPERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHN 60
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
SL+ DD+ D+ +RRG P H Y + I + N + E + + ++ +
Sbjct: 61 ASLLIDDIE--DSSTLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVHVFT 118
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
+ +L L GL E+Q + KTG L A + + +
Sbjct: 119 RQLLELHRGQGL-----DIHWRDTYTCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKR 173
Query: 205 NEKERLRCFGENLGIIFQLADDL 227
+ K L LG+ FQ+ DD
Sbjct: 174 DLKPLLDT----LGLFFQIRDDY 192
>gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis]
gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis]
Length = 337
Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 DELNGILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GEIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLG 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + ++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFSD-NKEDYSKLTAI---LGLYFQIRDDY 202
>gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
Length = 402
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 64/253 (25%), Gaps = 28/253 (11%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAI-------RYALLGGKKIRSFLV 58
+ L + L A L+ A GGK +R LV
Sbjct: 50 ASFLDAVQARLAESLAFAADAGGVVTAGLPSSALVEASSLETLVRDLLAAGGKLVRPRLV 109
Query: 59 ----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
N + A L L D + + +V
Sbjct: 110 RLGYLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDDVMDASDTRRGTPTAHHQV 169
Query: 115 TAIIAG-----NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-------LQGMLGG 162
A A L + +++ N + + + + G
Sbjct: 170 RAAAAQPDGPDAARLGDSVAVLAGDLAFALANRLVRALPEHVADAWDAAVVELVTGQRLD 229
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
+ + + + + + E GA++A S L FG LG F
Sbjct: 230 LVFAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALLAGESAP-PTWLSRFGAALGEAFA 288
Query: 223 LADDLLDCEEDLP 235
LADD++ +
Sbjct: 289 LADDIIGLWGEPA 301
>gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase
[Taeniopygia guttata]
Length = 299
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 12/196 (6%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ + R+L +Y L L GK++R+ L NV + E +H SL+ DD
Sbjct: 5 DETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDD 64
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ DN +RRG P H Y + I N + E + + + ++ +L L
Sbjct: 65 IE--DNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELH 122
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
GL E + + KTG L A + ++ ++ K L
Sbjct: 123 KGQGL-----DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLN 177
Query: 212 CFGENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 178 T----LGLFFQIRDDY 189
>gi|6831550|sp|Q92236|GGPPS_GIBFU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1524045|emb|CAA65644.1| geranylgeranyl pyrophosphate synthetase [Gibberella fujikuroi]
Length = 418
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 12/214 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + + Y + GK R+ L+ +V + + +
Sbjct: 112 EDLEFTAKRSWTDEKENVVRGPYDYVISHPGKDFRAQLIGAFNVWLDVPTSSLEVITRVV 171
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I +GN + A + +
Sbjct: 172 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSGNYIYFVALQELHKLNNPEL 229
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I S +++L G+ E + KTG L + A
Sbjct: 230 ITIFSDELVNLHRGQGM-----DLFWCDTLTCPTEEDYLEMVGNKTGGLFRLGIKLMAAE 284
Query: 200 AHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A+ S + L +G+IFQ+ DD ++
Sbjct: 285 ANGPSPTDCVPLVNL---IGLIFQIRDDYMNLSS 315
>gi|154285144|ref|XP_001543367.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1]
gi|150407008|gb|EDN02549.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1]
Length = 347
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
N +++ L+ + H + + + +I GGK R V
Sbjct: 6 NRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + + + I
Sbjct: 66 EKPLNDEQFKDLCTLGWMTEFLQAFFLVSDDIMDSSVTRRGEPCWYRRPNVGMIAINDAF 125
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L ++ ++ +L +T L + + +D +
Sbjct: 126 MLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLDNFSMDKF 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + + LG FQ DD LD
Sbjct: 186 NFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|225556978|gb|EEH05265.1| farnesyl-pyrophosphate synthetase [Ajellomyces capsulatus G186AR]
Length = 347
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 16/237 (6%)
Query: 12 NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
N +++ L+ + H + + + +I GGK R V
Sbjct: 6 NRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLALL 65
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + MD+ RRG+P + + + I
Sbjct: 66 EKPLNDEQFKDLCTLGWMTEFLQAFFLVSDDIMDSSVTRRGEPCWYRRPNVGMIAINDAF 125
Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+L ++ ++ +L +T L + + +D +
Sbjct: 126 MLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTELGQLCDLLTAPEDNVDLDNFSMDKF 185
Query: 181 QKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + + LG FQ DD LD
Sbjct: 186 NFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST]
gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 12/201 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
Q + ++ LL Y + GK++RS L ++ + + ++ +H S
Sbjct: 15 DKSSQKEQDETLLQPFSYIQQIPGKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSS 74
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ DN +RRG P H Y + I A N +L A E + + ++
Sbjct: 75 LLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATRVYTEQ 132
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L L G++ ET+ + KTG L A + + ++ +
Sbjct: 133 LLELHRGQGME-----IYWRDNYACPTETEYKQMTIRKTGGLFMLAIRLMQLFSE-NRKD 186
Query: 207 KERLRCFGENLGIIFQLADDL 227
+L LG+ FQ+ DD
Sbjct: 187 FTKLTAI---LGLYFQIRDDY 204
>gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methylophilales bacterium HTCC2181]
gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Methylophilales bacterium HTCC2181]
Length = 322
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 12/228 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+P + +E + + L H+ + GK IR+ L SL
Sbjct: 13 MPPEAEEFLDIVKREFSESLNVEGRHLSQWLK-------HHGESEGKWIRAKLALATGSL 65
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ T ++ E IH SL+HDD+ D RRG+ TV ++ AI G+ L+
Sbjct: 66 LGLSSETYIKWAVVCELIHSASLLHDDVC--DKDLYRRGRLTVWKEFGIPAAICTGDYLI 123
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+F+ I+ I +L+ S +I + + +D I K
Sbjct: 124 AESFKKITEISQGWHQTILLKLLSSSVKDIVF---GQSVDVSVDSVLLDWANYQKIAIKK 180
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
TG L+ +E L+ ENLG+ +Q +D+ +
Sbjct: 181 TGPLIMLPIMGMFKCKEFDGDECIALKEISENLGLAYQWVNDIENFVG 228
>gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 240
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
Q+ +KT +LM S ++ + E + +G N+GI FQL DD+LD E
Sbjct: 75 QMRDKTYLKTASLMAKGARSAVVLGGCEEGEVWKDIAYAYGRNVGIAFQLIDDILDYES 133
>gi|303286197|ref|XP_003062388.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455905|gb|EEH53207.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 336
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 13/229 (5%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHL 70
K +++ +L+ + Q Q + + + Y + GK R V +
Sbjct: 17 FLKTFESLRSELVDAERADGQVQIAIQWIDKMVEYNVPHGKLNRGLAVIDGVRALKGGAA 76
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT----VHIQYDEVTAIIAGNGLLTY 126
+ + + + I T + + A N L
Sbjct: 77 CVDDALMHQASVVGWCIEWLQAAFLVWDDIMDESVTRRGQPCWYKSDGVDMNAINDGLVL 136
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+I S K+ + + + T + L ++ G + + E + ++ G
Sbjct: 137 ECQIYSMLKSTASLSQMFRDVTDQTAHGQLIDLITGPIGVVDLSKYTEEAYMPHRDVQDG 196
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
L + + + LG FQ+ DD LDC D
Sbjct: 197 VLHVLPP--------GGERDASKCDEICRLLGQFFQIQDDYLDCYGDPA 237
>gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP
synthase in Mus musculus [Schistosoma japonicum]
Length = 335
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 12/196 (6%)
Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
++ Y GK IRS L+ V T + + I+ +H SLI DD
Sbjct: 11 KLSEKVVMEPYNYTCSTNGKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDD 70
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ D Y+RRGKP H + ++I + N + A E +S + I ++ ML L
Sbjct: 71 IE--DGSYLRRGKPAAHCVFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELH 128
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G+ + E++ + KTG L + + + K L
Sbjct: 129 RGQGM-----DIYWRSSFKCPSESEYEAMVLCKTGGLFGLGVRLMQLFSKNQTDYKPLLD 183
Query: 212 CFGENLGIIFQLADDL 227
+G+ FQ+ DD
Sbjct: 184 T----IGLFFQIRDDY 195
>gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris
gallopavo]
Length = 299
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 12/196 (6%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ + R+L +Y L L GK++R+ L NV + E +H SL+ DD
Sbjct: 5 DETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDD 64
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ DN +RRG P H Y + I N + E + + + ++ +L L
Sbjct: 65 IE--DNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELH 122
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
GL E + + KTG L A + ++ ++ K L
Sbjct: 123 KGQGL-----DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLN 177
Query: 212 CFGENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 178 T----LGLFFQIRDDY 189
>gi|307215481|gb|EFN90138.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator]
Length = 356
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 15/214 (7%)
Query: 33 TQHNDRLLSAIRYALLGGKKIRSF-LVTE------CASLFNVNHLTALRVGAAIECIHCY 85
+ + ++Y + GGKK R LV + N + +E +H +
Sbjct: 41 PNISKWIAKVLQYNVPGGKKTRGLALVYAYKMLVSSDQITEENIRAIRILAWCVELLHAF 100
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
++ DD+ + +H AI + + ++++ + +
Sbjct: 101 FIMIDDIQDRSQFRRNQPCWYLHNDMGLA-AINDSLMIESIMYQLLRKSFSGKNCYVDLV 159
Query: 146 LMLSLTHNIGLQGM------LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ G + + F + ++ + +
Sbjct: 160 ETFQDITLKTILGQSLDLQSTNFGKMPNLNLFTMDRYNSIVNYKSSYYTFILPVTVAMHV 219
Query: 200 AH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A Q + + +G FQ+ DD LDC
Sbjct: 220 AGIKDQEMFRQAKTILLEMGHFFQVQDDYLDCYG 253
>gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana)
tropicalis]
gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis]
gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 74/197 (37%), Gaps = 12/197 (6%)
Query: 32 QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ LL +Y L L GK+IR+ L NV + E +H SL+ D
Sbjct: 5 KEVSERILLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLID 64
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ DN +RRG P H Y + I + N + E + + ++ +Q +L L
Sbjct: 65 DIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFTQQLLEL 122
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
GL E + + KTG L A + + ++ K L
Sbjct: 123 HRGQGL-----DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSSYDKDLKPLL 177
Query: 211 RCFGENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 178 NT----LGLFFQIRDDY 190
>gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis
carolinensis]
Length = 300
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL Y L L GK++R+ L NV + E +H SL+ DD+ DN
Sbjct: 12 LLEPYHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I N + + + + + + +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINCANFIYFLGLQKVLTLDHPDAVKVFTLQLLELHKGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E++ + KTG L A + ++ ++ K L L
Sbjct: 129 ----DIYWRDNYTCPTESEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
Length = 153
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 183 MKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE--D-LPK 236
MKT +LM + + ++ E E +G NLGI FQL DD+LD E D L K
Sbjct: 1 MKTASLMAKGARAATCLGGCTEGELYREIAYAYGRNLGIAFQLVDDVLDYEAVEDTLGK 59
>gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia]
gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans]
gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia]
gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans]
Length = 338
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|320586989|gb|EFW99652.1| farnesyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
Length = 347
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 18/242 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV----- 58
+ L+E + + L++ LL+ A + ++ ++ LGGK R V
Sbjct: 4 KTTLKEF-EAVFPKLEETLLRHAKKYGLPEEYLQWYKKSLETNPLGGKCNRGMSVPDSVS 62
Query: 59 -TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
+L + A +G E + + LI DD+ MD+ RRG P + Q
Sbjct: 63 VLLGRALTEKEYFQAATLGWLTELLQAFFLISDDI--MDSSITRRGNPCWYRQEGVGMVA 120
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEF 171
I +L A + + + + L + + + + + F
Sbjct: 121 INDAFMLESAIYTLLREHFRSHPSYVDMIELFHEVTFQTELGQLTDLLTAPEDIVNLNNF 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
E F++ + + + +G FQ+ DD LD
Sbjct: 181 SLEKYRFIVIYKTAYYSFYLPVALALHLLELGTPENLKTAESILIPMGEYFQVQDDYLDN 240
Query: 231 EE 232
Sbjct: 241 FG 242
>gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
Length = 338
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster]
gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster]
gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster]
gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster]
gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster]
Length = 338
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ DD+ DN +RRG P H Y + I A N L A E +
Sbjct: 62 GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202
>gi|308505412|ref|XP_003114889.1| CRE-FDPS-1 protein [Caenorhabditis remanei]
gi|308259071|gb|EFP03024.1| CRE-FDPS-1 protein [Caenorhabditis remanei]
Length = 351
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 71/247 (28%), Gaps = 27/247 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFLVT 59
K ++ L ++ + + + + Y ++GGK R+ L
Sbjct: 5 RKLVEKALGEVKKKFVGVVSAKLP---ADGMEYDLVQYRCRNLFDNTVIGGKYSRASLCV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDL-----PSMDNGYIRRGKPTVHIQYDEV 114
+ + + A+ I MDN RRGK +
Sbjct: 62 DTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRGKQCWFRREGVG 121
Query: 115 TA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
+ I + ++ +I+ + R + L G Q
Sbjct: 122 MSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSVNQIASFT 181
Query: 174 ETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + KT F + I++ ++ +G +FQ DD LD
Sbjct: 182 WDRYELMVENKTSHYTVFHPLQMALIISDV-LAYHGAVKKAAYQIGFLFQSQDDFLDVYG 240
Query: 233 D---LPK 236
D K
Sbjct: 241 DPTITGK 247
>gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium
KB13]
gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium
KB13]
Length = 303
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 19/237 (8%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M + L K I L D ++ Q+ + GK IR+ L
Sbjct: 14 MPPEATADLHLVKKEIQKALQDKKTILNEWLKFQNRSK-----------GKFIRAQLALA 62
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
L N+ T ++ A E IH SLIHDD+ D RRG T+ +Y AI G
Sbjct: 63 SGELLNLPKDTVIKWSVACELIHTASLIHDDICDQDEK--RRGLTTIWKKYGVPAAICLG 120
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ ++ AF+ +S +T I + I + + + + + I I
Sbjct: 121 DFIIAQAFQKLSEIETGWHQTILLNSLSLSMKKIIVGQV---SDVGVDIKKISMKDYEQI 177
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
KTG L+ + ++E L ++G+ +Q+ +D + + KK
Sbjct: 178 AYEKTGPLLMTPLDGMFRCKELPESELNGLNKLMNSIGLAYQMINDYKNIKS---KK 231
>gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
fischeri NRRL 181]
gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
fischeri NRRL 181]
Length = 357
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ + + Y GK IR L++ + + + +H SL+ DD+
Sbjct: 67 EEKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDIQ 126
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ +RRG P H + I + N +A + + I ++ ML L
Sbjct: 127 --DSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRG 184
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
GL E + + KTG L A + + + +++ +
Sbjct: 185 QGL-----DLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMESQNTKDCVPLVD-- 237
Query: 214 GENLGIIFQLADDLLDCEEDL 234
LGIIFQ+ DD + + DL
Sbjct: 238 --LLGIIFQIRDDYQNLQSDL 256
>gi|119499053|ref|XP_001266284.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181]
gi|119414448|gb|EAW24387.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181]
Length = 347
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 65/239 (27%), Gaps = 16/239 (6%)
Query: 13 SKRIDTIL----DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECAS 63
+ +T+ +DLL + ++ + I + GGK R V
Sbjct: 7 REAFETVFPTLAEDLLAHAKKYNLPENALKWFEQVINVNVPGGKLNRGLSVPDTGLALLQ 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + MD+ RRG+P + I + +
Sbjct: 67 KPLTDEQFKHLSILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDSFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +I ++ +L T L + +D +
Sbjct: 127 LESGIYVILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYM 186
Query: 182 KMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ T ++ +A + ++ LG FQ+ DD LD D
Sbjct: 187 FIVTYKTAYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPA 245
>gi|115399985|ref|XP_001215581.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624]
gi|114191247|gb|EAU32947.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624]
Length = 342
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 19/247 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
S L+ + I L + + DRL + GK R V +
Sbjct: 5 ENFKSVLEVLANEIQEDLSER------KAPSAIRDRLQQCLLANTKDGKLNRGLTVVDTG 58
Query: 63 S--LFNVNHLTALRVGAAIECIHCYSL--IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
L + + + + MDN RRGK + + + TAI
Sbjct: 59 CTLLQRPPTPAEFQDLSILGWMVEMFQASYLVSDDIMDNSEYRRGKLCWYRRDEVGLTAI 118
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L + F ++ + + +L+ + G L + ++ +D+ V
Sbjct: 119 NDAAFLKSLMFSLLKKHFQHHAEYVGILELLNEASHRTELGQLSDADMAVKARGLDQMTV 178
Query: 178 FMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+++ ++++ +G FQ+ DD LDC
Sbjct: 179 EAYSFIARNKTAFYSFYLPIALALHYLRLANESNLKQVKTIMLPMGEYFQVQDDYLDCFG 238
Query: 233 D---LPK 236
D K
Sbjct: 239 DPSVTGK 245
>gi|68072031|ref|XP_677929.1| farnesyl pyrophosphate synthase [Plasmodium berghei strain ANKA]
gi|56498227|emb|CAI00471.1| farnesyl pyrophosphate synthase, putative [Plasmodium berghei]
Length = 332
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 65/250 (26%), Gaps = 33/250 (13%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS------LFNVNH 69
DT L+ + QH + + Y LGGK R LV + N+
Sbjct: 7 DTFLEHISDYALEDHIKQHILKYYKVLFDYNCLGGKNNRGILVILIYEYVKNRDINNLEW 66
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
A + IE + L+ DD+ + + + A+ L ++
Sbjct: 67 EKAACLAWCIEILQASFLVADDIMDKGETRRNKHCWYLLKDVETKNAVNDCLLLSNSIYK 126
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------------------------L 165
+I T + G +
Sbjct: 127 LIEIYLGNDTCYNDIIATFRDTVLKTIIGQHLDTNIFSNKYTDINKNIDTNNITIPEQVM 186
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQL 223
+ + ++ G ++ S + +++ +G FQ
Sbjct: 187 INTEMINFDVYKNVVVHKTAYYSFFLPIACGMQLSGISMDNLLYKKIEDISIMMGEYFQA 246
Query: 224 ADDLLDCEED 233
DD LD D
Sbjct: 247 HDDYLDIFGD 256
>gi|270011024|gb|EFA07472.1| farnesyl pyrophosphate synthase [Tribolium castaneum]
Length = 243
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 4/109 (3%)
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + L + L + + F +++
Sbjct: 40 HHCYVPTMELFHDVTLKTSMGQALDCLCNKDGKPNLELFTMNKYNSIVKYKTAYYTFQLP 99
Query: 193 CESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
MA+ + + +G+ FQ+ DD LDC D KK
Sbjct: 100 VALAMYMANLYDPEMHRQAKTILMEMGLFFQIQDDFLDCFGDPEVTGKK 148
>gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999]
Length = 188
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 17/198 (8%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
+ + ++ ++++ ++ + + +Q Y + GGK++R L
Sbjct: 7 SDDIKQLAHDDMQQVNQLIQTQVDSDVALIQQLGF--------YIVNSGGKRLRPLLCVL 58
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A + + + A IE IH +L+HDD+ +D +RRG+ T + + +++ G
Sbjct: 59 SAQALGITNQQHHHLAAIIEFIHTATLLHDDV--VDESLLRRGRETANALFGNQASVLVG 116
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L + AF+++ I S + +Q M E F +
Sbjct: 117 DFLYSRAFQMMVELDNMKVMRILSDATNRIAQGEVMQLMNVNDPNTT------EQSYFDV 170
Query: 181 QKMKTGALMCFACESGAI 198
KT L A + A+
Sbjct: 171 IYSKTARLFEAATQLAAV 188
>gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum]
gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum]
Length = 307
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 12/198 (6%)
Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
+++LL Y + GK IRS L N++ + +E +H SL+ DD+
Sbjct: 21 DEKLLQPFTYIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIVEMMHNASLLLDDIQ- 79
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
DN +RRG P H Y + I A N ++ A + + ++ +Q +L L
Sbjct: 80 -DNSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEAVSVYTQQVLELHRGQ 138
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G++ E + + KTG L A + + ++ + +L
Sbjct: 139 GME-----IYWRDSYTCPTEDEYKQMTIRKTGGLFMLAIRLMQLFSE-NKADYTKLTGI- 191
Query: 215 ENLGIIFQLADDLLDCEE 232
LG+ FQ+ DD L+
Sbjct: 192 --LGLFFQIRDDFLNLYS 207
>gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
Length = 170
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
+KL+ ++K + I+ +T + +A+ Y+ GGK++R L+ E L
Sbjct: 3 KNKLELHTKEVQNIIYTYAPAEEGFQKT-----IFTAMNYSFQAGGKRLRPLLMQETYRL 57
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
F AAIE IH YSLIHDDLP++DN RRG+ T H+ + E AI
Sbjct: 58 FGGTGKVVEPFMAAIEMIHTYSLIHDDLPALDNDEYRRGRKTSHVVFGEAMAI 110
>gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana]
Length = 299
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK+IR+ L NV + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + N+ +Q +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLLELHRGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
ET+ + KTG L A + + + ++ K L L
Sbjct: 129 ----DIYWRDTYTCPTETEYKSMVLQKTGGLFGLAVGLMQLFSSSKKDLKPLLNT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|167517607|ref|XP_001743144.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778243|gb|EDQ91858.1| predicted protein [Monosiga brevicollis MX1]
Length = 315
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 12/197 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
L RY GK IRS L+ + V + + +H SL+ DD+ DN
Sbjct: 23 LEEPYRYVTQKPGKDIRSKLINAFNAWLKVPDDKLAIIKEVTKILHNASLLIDDIE--DN 80
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H + I N + + ++ + ++ L GL
Sbjct: 81 SKLRRGLPVAHAIFGIPQTINCANYMYFICMAKVMDLQSPAAAQAFTDQLIELHRGQGL- 139
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ E + + KTG L A + + ++ L+ F
Sbjct: 140 ----DIFWRDTVQCPTEEEYKRMVLQKTGGLFALALRLMQLFSDDKRDFGPLLKTFS--- 192
Query: 218 GIIFQLADDLLDCEEDL 234
+ FQ+ DD + + D
Sbjct: 193 -LYFQIRDDYANLQSDE 208
>gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277]
gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277]
Length = 297
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ + +G+NLG+ FQ+ DD+LD +D L K
Sbjct: 170 DASNFKIYGKNLGLAFQIIDDILDVTQDAATLGK 203
>gi|121719090|ref|XP_001276285.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1]
gi|119404483|gb|EAW14859.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1]
Length = 347
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 16/239 (6%)
Query: 13 SKRIDTIL----DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECAS 63
+ + +DLL + ++ + ++ + GGK R V
Sbjct: 7 RAAFEAVFPSLAEDLLEHARKYNLPENAMKWFEKSLNANVPGGKLNRGLSVPDTGLALLQ 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + MD+ RRG+P + I + +
Sbjct: 67 KPLTDEQFKHLSTLGWLTELLQAFFLVSDDIMDSSITRRGQPCWYRYPGVGLIAINDSFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L I ++ +L T L + +D +
Sbjct: 127 LESGIYHILKKHFRSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYM 186
Query: 182 KMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ T ++ +A + ++ LG FQ+ DD LD D
Sbjct: 187 FIVTYKTAYYSFYLPVALALLYLELATPETLKQTHDILIPLGQYFQVQDDYLDAYGDPA 245
>gi|14625008|dbj|BAB61884.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum]
Length = 147
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDDLP MD+ +RRG PTVH+++ E TAI+ G+ L +AF ++S I L
Sbjct: 1 HDDLPCMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPGDSPIALVREL 60
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEK 207
+ + L + + ++ ++ + +MK+GAL+ + GA+ A +
Sbjct: 61 AQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAAHA 120
Query: 208 E---RLRCFGENLGIIFQLADDLLDCE 231
L + G+ Q+ DD+LD E
Sbjct: 121 ALYCALDHYSACFGLALQVIDDILDAE 147
>gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis]
Length = 299
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 75/207 (36%), Gaps = 12/207 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S Q LL +Y L L GK++R+ L NV + E +H
Sbjct: 1 MDSSSQASSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNA 60
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D+ +RRG P H Y + I + N + E + + + ++
Sbjct: 61 SLLIDDIE--DSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTR 118
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L L GL E + + KTG L A + + Q+
Sbjct: 119 QLLELHRGQGL-----DIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQD 173
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
K L LG+ FQ+ DD +
Sbjct: 174 LKPLLDT----LGLFFQIRDDYANLSS 196
>gi|296133277|ref|YP_003640524.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola
sp. JR]
gi|296031855|gb|ADG82623.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola
potens JR]
Length = 526
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 75/221 (33%), Gaps = 22/221 (9%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M G + + + ++ I++ ++ R+ Y + K + ++
Sbjct: 1 MAAGFLDTINSDLQAVEAIINKAFKIKPGYIGNFA--RIDD--DYPV---KYLHPAVIIL 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+F + + A I+ I+ + +H +P D ++ ++ G
Sbjct: 54 TGRMFGLYEEKLYSMAAIIQFIYLAANVHFRIPDYDPDP-----AETDVKDGVQYPVLVG 108
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
+ L F + + + ++ + L+ + + ++
Sbjct: 109 DYLYGRFFTTLCKGQIIHLLEPLADIICEMNVGGILRT----------QNYQSREEKLVV 158
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ ++ +L+ C +A S + + + FG N+G+ +
Sbjct: 159 IEKESASLLREGCRLTGSLAGVSAQDLDNIGNFGYNIGMGY 199
>gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA]
gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei]
Length = 541
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
+D RRG ++H +Y +I++G+ LL A + +S S ++ SL
Sbjct: 285 HDDVIDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFASIGYPEICKRFSYVIESL 344
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+ + ++ + + K + FAC AI++ + E
Sbjct: 345 IKG---EFLQTNLNYTNIEDALKTYLIKSYHKTASLFSHLFAC--IAIISFQNDQITELC 399
Query: 211 RCFGENLGIIFQLADDLLDCE 231
G ++G+ FQL DD LD +
Sbjct: 400 FNLGLHIGMAFQLYDDYLDYK 420
>gi|158286274|ref|XP_308653.4| AGAP007104-PA [Anopheles gambiae str. PEST]
gi|157020390|gb|EAA04004.4| AGAP007104-PA [Anopheles gambiae str. PEST]
Length = 443
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 74/241 (30%), Gaps = 13/241 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
S+ +E ++ DL + + + + A++Y + GKK R +
Sbjct: 105 KSESREFMAVFPDVVRDLTAYASKYDKNVATKWFVKALQYNVPQGKKNRGLACVLAYRML 164
Query: 66 N-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
N A +G AIE +H LI DD+ MD RRG+P H D + +
Sbjct: 165 ARSEDLTPENIRRAQYLGWAIEMLHSMFLIMDDV--MDGSVTRRGQPCWHTLDDVKLSGV 222
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---QGMLGGQMLDIQDEFIDET 175
++ A + + + L L Q + ++ +
Sbjct: 223 NDAIMIEAAIAHLVKIQYGNEPYYPRLLELFNEMKFITTIGQSLDLRSAKLDVTDYSMDL 282
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + + + +G +Q DD DC D
Sbjct: 283 YKSIVFHKTAYYTFYLPVAMAMHLTGYTDPEMFRQAKTILLEIGQFYQTQDDFFDCFGDP 342
Query: 235 P 235
Sbjct: 343 A 343
>gi|2735723|gb|AAB93984.1| farnesyl pyrophosphate synthase [Parthenium argentatum]
Length = 105
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
++Q +MA S + ++ +GI FQ+ DD LDC D
Sbjct: 34 HRRIVQYKTAYYSFYLPVACALLMAGESLDNHVNVKNILIEMGIYFQVQDDYLDCFADPE 93
Query: 234 -LPK 236
L K
Sbjct: 94 VLGK 97
>gi|255563600|ref|XP_002522802.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
gi|223538040|gb|EEF39653.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
Length = 352
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 18/231 (7%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHLTALR 74
LL A L + Y + GK R V +C L L A
Sbjct: 18 QLLNDPAFEFTDDSRQWLEHMLDYNVPRGKLYRGLAVIDCYKALKEGEELTGDEILLASV 77
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
+G +E + +++ DD+ MDN + RRG+P AI G L I+
Sbjct: 78 LGWCMEWLQACAVVLDDI--MDNSHTRRGRPCWFRLAKVGLIAINDGILLTNQCHRILRM 135
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188
+ + + + G + + + + +++
Sbjct: 136 YFREKPYYVDLLDLFNEVEFQSFSGEMIDLITTHKGEKDLSNYSLSLYHRIVEYKSAYYS 195
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ I+A + ++ + I F + DD DC D K
Sbjct: 196 IYLPVACALILAGENLENHAEVKKILIEITIYFSVQDDYQDCFGDPKITGK 246
>gi|170779365|gb|ACB37020.1| farnesyl-diphosphate synthase [Ganoderma lucidum]
gi|170779367|gb|ACB37021.1| farnesyl-diphosphate synthase [Ganoderma lucidum]
Length = 360
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 59/240 (24%), Gaps = 19/240 (7%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
+ ++ D + L + ++ M + Y + GGK R V + +
Sbjct: 6 AQKRQKFDNVFPKLREELLAYLNQEGMPQDAVSWFQRNLDYNVPGGKLNRGISVVDSVEI 65
Query: 65 FNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ A + + + + E +IA N
Sbjct: 66 LKGRKLNDDEYFKAALLGWCVEFLQAFFLVSDDMMDQSVTRRGQPCWFRVEGINLIAIND 125
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--------MLGGQMLDIQDEFIDE 174
I K + +L L H+ Q + + +F
Sbjct: 126 SFMLEGAIYYLLKKHFRSEPYYVHLLELFHDTTFQTEIGQLIDLITAPEDHVDLSKFSLA 185
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH---ASQNEKERLRC-FGENLGIIFQLADDLLDC 230
++ A N+ L LG FQ+ DD LD
Sbjct: 186 KHQKIVIYKTAYYSFYLPVALAMYTCGVPHAPANDPYALAQSILIPLGEYFQVQDDFLDF 245
>gi|116199155|ref|XP_001225389.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51]
gi|88179012|gb|EAQ86480.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51]
Length = 267
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 73/241 (30%), Gaps = 20/241 (8%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
+ + + + L H + Q D +++ +GGK R V
Sbjct: 4 KTTLQEFEAVFPKLEAALVEHANTYKLPAQALDWYKKSLQVNAVGGKCNRGMSVPDSVSM 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L + A +G E + + L+ DD+ MD+ RRGKP + Q I
Sbjct: 64 LLERPLTEDEYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRQEGVGMIAI 121
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFI 172
+L A + + L L + + + + D F
Sbjct: 122 NDAFMLEAAIYTLLKKFFRSHPRYVDLLELFHEVTYQTEIGQLCDLLTAPEDVVDLDNFS 181
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
E F++ M A+ ++ LG FQ+ DD LD
Sbjct: 182 MEKYRFIVVYKTAYYSFYLPVALALYMLDIATPENLKQAEDILIPLGEYFQIQDDYLDNF 241
Query: 232 E 232
Sbjct: 242 G 242
>gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 373
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 8/179 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR------G 103
G +R L+ A L +E +H SL H + R
Sbjct: 76 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPDP 135
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLG 161
+ V+ + TA++ G+ L FE +S + R + + G ++
Sbjct: 136 RTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAGAT 195
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ I+ ++ T AC GA +A A + L +GE LG+
Sbjct: 196 RERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGMA 254
>gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
clavuligerus ATCC 27064]
gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase [Streptomyces
clavuligerus ATCC 27064]
Length = 396
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 8/179 (4%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR------G 103
G +R L+ A L +E +H SL H + R
Sbjct: 99 GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAPDP 158
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLG 161
+ V+ + TA++ G+ L FE +S + R + + G ++
Sbjct: 159 RTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAGAT 218
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ I+ ++ T AC GA +A A + L +GE LG+
Sbjct: 219 RERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGMA 277
>gi|312220249|emb|CBY00190.1| similar to farnesyl pyrophosphate synthetase [Leptosphaeria
maculans]
Length = 349
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 16/222 (7%)
Query: 31 MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS------LFNVNHLTALRVGAAIECIHC 84
+ Q D ++ Y +GGK R V + + L +
Sbjct: 30 LPQQSLDWFTKSLNYNTVGGKCNRGMSVVDTTAILTDKALDPASDDYFGPALLGWLIELL 89
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
+ MD+ RRG P ++ I +L + ++ + +
Sbjct: 90 QAFFLVSDDIMDSSKTRRGSPCWYLVPQVGMIAINDAFMLEASIYVLLKKHFRQHKSYLD 149
Query: 145 QLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA- 197
L L + + + D F E F++
Sbjct: 150 LLELFHEVTFQTECGQLCDLITAPEDNVNLDNFSLEKFTFIVIYKTAFYSFYLPVAIALH 209
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ A+ + + +G FQ DD LD D L K
Sbjct: 210 YVGAATPKNLQTAQEILIPMGEYFQAQDDYLDAFADPDVLGK 251
>gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH]
gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH]
Length = 287
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ + +G+N+GI FQ+ DDLLD +D
Sbjct: 160 DRNKFATYGKNIGIAFQIIDDLLDITQDEE 189
>gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 397
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 74/217 (34%), Gaps = 13/217 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + + + + + + Y + GK+IR L+ + V+ + A +
Sbjct: 89 DTIDAKLSMYWEAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQPCQAIAATV 148
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
H SL+ DD+ D+ +RRG P H Y I + N + A + + +
Sbjct: 149 GMAHNASLLIDDIQ--DSSKLRRGVPCAHEVYGVAQTINSANYVYFLAQDQLFRLRNW-- 204
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + + +G + KTG L A +
Sbjct: 205 --PQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMAVR----L 258
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
S + + LG+ FQ+ DD + + K
Sbjct: 259 LQTSSRHVVDVEQLVDVLGLYFQILDDYKNVK--EEK 293
>gi|293353562|ref|XP_001070116.2| PREDICTED: serine/threonine/tyrosine interacting protein [Rattus
norvegicus]
Length = 393
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 70/247 (28%), Gaps = 19/247 (7%)
Query: 1 MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHND---RLLSAIRYALLGGKKIRS 55
MNG KL ++ + +++ + + H + RL + + +GGK R
Sbjct: 54 MNGD--QKLDAYNQEKQNFIQHFSQIVKVLTEDELGHPETITRLKEVLACSAVGGKFTRG 111
Query: 56 FLVTECAS-----LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
V + + + M+ R + + +
Sbjct: 112 LTVVQAFKELLEPRKQDAENLEWALAVGWCVGLLQAXFLMSDDIMNPSLTRHSQICWYQK 171
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
AI L + ++ ++ G ++
Sbjct: 172 PGIGLAINDALLLEASIYRLL----KFSCREQPYSFCRVTSNRPGRLSLITAPQGHADLG 227
Query: 171 FIDETQVFMIQKMKTGALMCF--ACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDL 227
E + I K KT +L F + +A S + E +G FQ+ DD
Sbjct: 228 RHTEKRYKSIVKYKTASLYSFYLPITAAVCLAGISGEKEHANAMKILLEMGEFFQVQDDS 287
Query: 228 LDCEEDL 234
LD D
Sbjct: 288 LDPHGDT 294
>gi|14624998|dbj|BAB61879.1| farnesyl diphosphate synthase [Rhodobacter blasticus]
Length = 138
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 8/142 (5%)
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
HDD+P MDN +RRG PTVH+++DE TA++AG+ L T AFE++ P +R L+
Sbjct: 1 HDDMPCMDNDDLRRGLPTVHVKWDEATAVLAGDALQTLAFELLCDPVAG-PAEVRIGLVQ 59
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQ 204
+L G +GM+ GQ LDI E ++ +Q KTGAL+ F+ E+GAI+A A
Sbjct: 60 ALAQASGAEGMVLGQALDIAAETAGRPLTLDEITALQAGKTGALIRFSAEAGAILAQAD- 118
Query: 205 NEKERLRCFGENLGIIFQLADD 226
+ LR + LG+ FQ+ADD
Sbjct: 119 --RAPLRTYATALGLAFQIADD 138
>gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
Length = 711
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 76/207 (36%), Gaps = 10/207 (4%)
Query: 29 SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
+ ++ + + + IRY + K RS LV + +V + + I C+H SL
Sbjct: 403 PPVHSRAEEVIQAPIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSL 462
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
I DD+ DN +RRG P H+ Y AI + L A I+S + ++ + +
Sbjct: 463 ILDDIE--DNSRLRRGFPATHVVYGAGPAINSATYLYVQAVAAINSLDNREMMDVLLRQL 520
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT--GALMCFACESGAIMAHASQN 205
+L + + + KT M A ++ +
Sbjct: 521 QNLFLGQ-----SLDLHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIAASNVNSPEK 575
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
+ F G+ +Q+ DD L+
Sbjct: 576 TRAAFAAFSHLSGLYYQVRDDYLNITS 602
>gi|71041841|pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima K41a Mutant
gi|71041842|pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima K41a Mutant
Length = 299
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L G +R L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGAMLRVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
Length = 345
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 5/156 (3%)
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
++ MD RRG+ TV + E AI+ G+ L A ++
Sbjct: 96 MHNFSLVHDDVMDRDATRRGRATVWAVWGETNAIVLGDALHALAGRVLVEMLEPEVAANA 155
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ + L E + + KT LM AC GA+ A+A
Sbjct: 156 VM--RLESSCVTLCDGQFEDCDFETRESVSVDGYLEMAAGKTAGLMGCACALGALAANAD 213
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ FG LG+ FQ+ DD++ D K
Sbjct: 214 PATVTAMHQFGFQLGLAFQIVDDVMGLWGDPNVTGK 249
>gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
Length = 335
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 16/212 (7%)
Query: 18 TILDDLLLQTA-SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
L+ +L +T Q + ++ LL Y + GK+ RS L + ++
Sbjct: 2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
G ++ +H SL+ + DN +RRG P H Y + I A N L A E +
Sbjct: 62 GNIVQMLHNSSLLIE-----DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 116
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ ++ +L L G++ E+ ++ KTG L A
Sbjct: 117 HPEVRKVYTEQLLELHRGQGMEI-----YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 171
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +++ + +L LG+ FQ+ DD
Sbjct: 172 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 199
>gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378]
Length = 188
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
L L K +LD+ L + + + +L ++ Y++ GGK+IR LV
Sbjct: 3 DLTLFLDHYKK----VLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATL 56
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
N+ + L+ A+E IH YSLIHDDLP+MD+ RRGK T H Y + TAI+AG+
Sbjct: 57 QALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDA 116
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
LLT AF I++ + R L+ ++++ G +GM+GGQ
Sbjct: 117 LLTLAFSILAEDENL-SFETRIALINQISYSSGAEGMVGGQQ 157
>gi|78191063|gb|ABB29856.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
sanderae]
Length = 234
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + ++ ++ +GI FQ+ DD LDC D
Sbjct: 110 HRRIVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPG 169
>gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
holarctica 257]
Length = 203
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEE 232
+ + KT L ACE +++ Q+ + R++ +G LG FQ+ADD+LD
Sbjct: 41 EYIKVIYCKTAKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVS 100
Query: 233 DLP 235
D
Sbjct: 101 DAE 103
>gi|4115416|dbj|BAA36347.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group]
Length = 186
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++Q + +++ + + +GI FQ+ DD LDC D
Sbjct: 27 HRRIVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGD 84
>gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 162
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 36 NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
N ++ A++Y ALLGGK++R FLV +F V+ T AA+ECIH YSLIHDDLP+
Sbjct: 3 NTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPA 62
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHN 153
MD+ +RRG PT HI++ E AI+AG+ L T AF IIS P ++ D R ++ L +
Sbjct: 63 MDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANA 122
Query: 154 IGLQGMLGGQ 163
G+ GM GGQ
Sbjct: 123 SGIAGMCGGQ 132
>gi|229597840|pdb|3EGT|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-722
gi|229597841|pdb|3EGT|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-722
Length = 413
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------F 65
+L++L L+ M L + LGGK R V + A
Sbjct: 63 LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 120
Query: 66 NVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + H + MDN RRGKP + D +GL
Sbjct: 121 GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPDVTVQCAINDGL 180
Query: 124 LTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQGMLGGQML 165
L ++ + + + + S+ + L +
Sbjct: 181 LLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTT 240
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLA 224
EF +++ G I++ A + +G FQ+
Sbjct: 241 TDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYFQVQ 300
Query: 225 DDLLDCE 231
DD++DC
Sbjct: 301 DDVMDCF 307
>gi|153840450|ref|ZP_01993117.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
gi|149745889|gb|EDM57019.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
Length = 89
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
L + + +G+ FQ+ DD+LD D
Sbjct: 1 LERYSKAIGLAFQVQDDILDIISDTE 26
>gi|328862571|gb|EGG11672.1| hypothetical protein MELLADRAFT_41913 [Melampsora larici-populina
98AG31]
Length = 370
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 62/244 (25%), Gaps = 30/244 (12%)
Query: 20 LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALR 74
+ ++LL A + ++ D + Y GGK R V + +
Sbjct: 19 IKEVLLDQAKQEKLPSEAFDWFERNLDYNTPGGKLNRGTAVVDTFRILKGEELTSDEFFS 78
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A C+ M + + R + + EV I + + I
Sbjct: 79 SAALGWCVELLQAYFLVADDMMDQSVTRRGQPCYYRLPEVGNIAINDSFMLEGTIYIILK 138
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLG-------GQMLDIQDEFIDETQVFMIQKMKTGA 187
K + L+ + + ++F E ++
Sbjct: 139 KFFRQHPSYVNLLELFHDVTFQTELGQLIDLLAAPEDHVDLNKFSLEKHQLIVLYKTAFY 198
Query: 188 LMCFACESGAIMAHASQ------------------NEKERLRCFGENLGIIFQLADDLLD 229
+ + + + LG+ FQ+ DD LD
Sbjct: 199 SFYLPVALAMRLYGMTSPNDPGQSESNECKNGTKTDCYRQAMDILLPLGVYFQVQDDYLD 258
Query: 230 CEED 233
C D
Sbjct: 259 CYGD 262
>gi|118137651|pdb|2EWG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Minodronate
gi|118137652|pdb|2EWG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Minodronate
gi|118138036|pdb|2I19|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate
gi|118138037|pdb|2I19|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate
gi|158429227|pdb|2OGD|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-527
gi|158429228|pdb|2OGD|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-527
gi|169404558|pdb|2P1C|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-210
gi|169404559|pdb|2P1C|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-210
gi|229597759|pdb|3DYF|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-461 And Isopentyl Diphosphate
gi|229597760|pdb|3DYF|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-461 And Isopentyl Diphosphate
gi|229597761|pdb|3DYG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-461
gi|229597762|pdb|3DYG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-461
gi|229597763|pdb|3DYH|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-721
gi|229597764|pdb|3DYH|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-721
gi|229597838|pdb|3EFQ|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-714
gi|229597839|pdb|3EFQ|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
Bisphosphonate Bph-714
Length = 390
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------F 65
+L++L L+ M L + LGGK R V + A
Sbjct: 40 LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 97
Query: 66 NVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + H + MDN RRGKP + D +GL
Sbjct: 98 GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPDVTVQCAINDGL 157
Query: 124 LTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQGMLGGQML 165
L ++ + + + + S+ + L +
Sbjct: 158 LLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTT 217
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLA 224
EF +++ G I++ A + +G FQ+
Sbjct: 218 TDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYFQVQ 277
Query: 225 DDLLDCE 231
DD++DC
Sbjct: 278 DDVMDCF 284
>gi|30522953|gb|AAO17735.1| farnesyl pyrophosphate synthase [Trypanosoma brucei]
Length = 367
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------F 65
+L++L L+ M L + LGGK R V + A
Sbjct: 17 LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 74
Query: 66 NVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + H + MDN RRGKP + D +GL
Sbjct: 75 GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPDVTVQCAINDGL 134
Query: 124 LTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQGMLGGQML 165
L ++ + + + + S+ + L +
Sbjct: 135 LLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTT 194
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLA 224
EF +++ G I++ A + +G FQ+
Sbjct: 195 TDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYFQVQ 254
Query: 225 DDLLDCE 231
DD++DC
Sbjct: 255 DDVMDCF 261
>gi|296387400|ref|ZP_06876899.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
Length = 87
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
+ E +G+ FQ+ DD+LD E D
Sbjct: 1 RYAEAIGLAFQVQDDILDVESDTA 24
>gi|261329450|emb|CBH12431.1| farnesyl pyrophosphate synthase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 367
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 69/247 (27%), Gaps = 36/247 (14%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------F 65
+L++L L+ M L + LGGK R V + A
Sbjct: 17 LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 74
Query: 66 NVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + H + MDN RRGKP + +GL
Sbjct: 75 GARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPGVTVQCAINDGL 134
Query: 124 LTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQGMLGGQML 165
L ++ + + + + S+ + L +
Sbjct: 135 LLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQPTT 194
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLA 224
EF +++ G I++ A + +G FQ+
Sbjct: 195 TDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYFQVQ 254
Query: 225 DDLLDCE 231
DD++DC
Sbjct: 255 DDVMDCF 261
>gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine
crenarchaeote HF4000_APKG10F15]
Length = 100
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
K K+I+ +LD S ++ ++YAL GGK+IR ++ +
Sbjct: 3 EKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALGGGKRIRPIILLLASECVG 55
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
AIE +H S+IHDD+ + ++ + Y
Sbjct: 56 EIDDNTFAAACAIEFLHTESVIHDDIIDNETIRRQKDPFHIKYGY 100
>gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R]
gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R]
Length = 327
Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 72/200 (36%), Gaps = 6/200 (3%)
Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
S + +L Y + GK +R ++ +V +G + +H SL
Sbjct: 27 SEWRQSDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGRIVGMLHNASL 86
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ D+ +RRG P H Y I N + AF+ +S+ + +
Sbjct: 87 LVDDVE--DDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEVSALQASCD-KYDLHTI 143
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ +G + E + + KTG L A +MA+A+ +
Sbjct: 144 VIDELLNLHRGQGLDLLWRDTLTCPSEQEYIAMVNNKTGGLFRLAVRL--MMANATTSVG 201
Query: 208 ERLRCFGENLGIIFQLADDL 227
+GI FQ+ DD
Sbjct: 202 VDFIPLVNLIGIYFQIRDDY 221
>gi|213402169|ref|XP_002171857.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
yFS275]
gi|211999904|gb|EEB05564.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
yFS275]
Length = 341
Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 65/236 (27%), Gaps = 11/236 (4%)
Query: 10 QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIR--SFL----VTECA 62
++ S ILD L + + +L I +GGK R + L V
Sbjct: 3 RDYSAHFAIILDTLTQSLSKLNCPEGLKENVLHTITQNTIGGKGTRGKAVLESVKVLLGT 62
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
L + H + +G +E + L+ DD+ R + +
Sbjct: 63 ELTDDMHEKSCLLGWIVEMLQGSFLVADDIMDKSLTRRGRPCWYLQVGTSRAFTEAVMME 122
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179
L + + + L Q M + + F+
Sbjct: 123 NLVFVLLRLFFRDQPYYKELLDTFHEILLQTETGQEMDLILSIGGVPMNTSFSLKAYEFI 182
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + I+ + + + LG FQ DD LDC D
Sbjct: 183 VTYKTAYYSFYLPIKCAMILVGMKEKQAYVDAKRLAVQLGRYFQFQDDFLDCYGDS 238
>gi|17508563|ref|NP_493027.1| hypothetical protein R06C1.2 [Caenorhabditis elegans]
gi|5824560|emb|CAB03221.2| C. elegans protein R06C1.2, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 352
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 27/247 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFLVT 59
K ++T L ++ + + + + Y ++GGK R+ L
Sbjct: 5 RKLVETALGEVKKKFVRVVAAKLP---ADGMEYDLVQYRCRNLFDNTVIGGKYSRASLCV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDL-----PSMDNGYIRRGKPTVHIQYDEV 114
+ + + A+ I MDN RRGKP +
Sbjct: 62 DTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRGKPCWFRREGVG 121
Query: 115 TA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
+ I + ++ +I+ + R + L G Q
Sbjct: 122 MSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSVNQISSFT 181
Query: 174 ETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + KT F + I++ ++ +G +FQ DD LD
Sbjct: 182 WDRYELMVENKTSHYTVFHPIQMALIISDV-LAYHGSVKKVAYQIGFLFQSQDDFLDVYG 240
Query: 233 D---LPK 236
D K
Sbjct: 241 DPKITGK 247
>gi|119713780|gb|ABL97828.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
bacterium HF10_49E08]
Length = 303
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 2/183 (1%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
G+KIR+ + + ++ L + A + +H SLIHDDL D RRG T
Sbjct: 37 GQKIRAKICLAVGKSYGLDEDLLLDIAAFTDLLHNASLIHDDLIDDDAE--RRGYATPWK 94
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+Y + A++ G+ L+ + + + K D + +S ++G Q
Sbjct: 95 KYGKDKALLLGDLLIAKSLTVSAGMKADSVDKLAWASEISNCVTSAVRGAFKELDFVSQT 154
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ + + KTG L AI A +Q + + N+ I +Q+ DD D
Sbjct: 155 SDDIISNYTQMSRDKTGVLFALPARCVAIAARKNQLCLDSITNIFTNMAIAYQIRDDQAD 214
Query: 230 CEE 232
Sbjct: 215 YLG 217
>gi|72391330|ref|XP_845959.1| farnesyl pyrophosphate synthase [Trypanosoma brucei TREU927]
gi|62175946|gb|AAX70070.1| farnesyl pyrophosphate synthase [Trypanosoma brucei]
gi|70802495|gb|AAZ12400.1| farnesyl pyrophosphate synthase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 367
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 69/254 (27%), Gaps = 37/254 (14%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTECASL------- 64
++ + LL+ +R L + LGGK R V + A
Sbjct: 8 QVYDEIQMFLLEELKLKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPN 67
Query: 65 ------FNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + + H + MDN RRGKP +
Sbjct: 68 NNGEKDDGARRKRVLHDACVCGWMIEFLQAHYLVEDDIMDNSVTRRGKPCWYRHPGVTVQ 127
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQG 158
+GLL ++ + + + + S+ + L
Sbjct: 128 CAINDGLLLKSWTHMMAMHFFADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDP 187
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENL 217
+ EF +++ G I++ A + +
Sbjct: 188 DVSQPTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLM 247
Query: 218 GIIFQLADDLLDCE 231
G FQ+ DD++DC
Sbjct: 248 GEYFQVQDDVMDCF 261
>gi|297170553|gb|ADI21581.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
HF0070_35E03]
Length = 180
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
I + KTG L ACE G +A S+ + FG +LGII+Q+ DDL+D +
Sbjct: 4 NDYLSIIQGKTGELFRAACEVGTHLAGFSKETTIQAGNFGSSLGIIYQIYDDLVDSFGNP 63
Query: 235 P 235
Sbjct: 64 G 64
>gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
clavatus NRRL 1]
gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
clavatus NRRL 1]
Length = 359
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 12/200 (6%)
Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
+ + + Y GK IR L++ + + I +H SL+ DD+
Sbjct: 70 EKIISAPLDYLSGFPGKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASLLIDDIQ- 128
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
D+ +RRG P H + I + N +A + + I + +L L
Sbjct: 129 -DSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLRLHRGQ 187
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G+ E + + KTG L A + + + ++ + L
Sbjct: 188 GM-----DLYWRDSLICPTEEEYLDMVSNKTGGLFRLAIKLMQMESQ-NERDCVPLVDL- 240
Query: 215 ENLGIIFQLADDLLDCEEDL 234
LGIIFQ+ DD + + DL
Sbjct: 241 --LGIIFQIRDDYQNLQSDL 258
>gi|71026636|ref|XP_762981.1| farnesyl pyrophosphate synthetase [Theileria parva strain Muguga]
gi|68349933|gb|EAN30698.1| farnesyl pyrophosphate synthetase, putative [Theileria parva]
Length = 353
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 18/235 (7%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALR-- 74
L+ + + ++ +Q+ S AI+Y L GK +R ++ ++
Sbjct: 25 KFLELSIDELKTYGLSQNVLLYYSYAIQYNLQ-GKMLRGTMLMSTVKSLCGTNIPENLTT 83
Query: 75 ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +E + L+ DD+ + AI L T +
Sbjct: 84 QTLIAGMSWCVELLQTSFLVADDIIDKSLKRRSNTCWYLVPTIGVENAINDVMFLYTLIY 143
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK------ 182
I+ K+ + + + G + ++
Sbjct: 144 RILFKTLKDTKNFLEIVETFNRISMTTILGQHLDIYESNTNRLFQDSNEATKLFAEICKN 203
Query: 183 MKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + G +++ + ++ +G +FQ DD LDC D
Sbjct: 204 KTSYYSFFLPLKLGMVLSGVELSNLFYSKVESISVLIGTLFQAQDDYLDCYGDPE 258
>gi|78191047|gb|ABB29848.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
sanderae]
Length = 234
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + ++ ++ +GI FQ+ DD LDC D
Sbjct: 110 HRRIVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPE 169
>gi|161610601|gb|ABX75047.1| farnesyl diphosphate synthase [Polygala tenuifolia]
Length = 252
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA+ + + ++ ++G FQ+ DD LDC D
Sbjct: 93 HRRIVQYKTAYYSFYLPVACALLMANENLDNHVDIKNILVDMGTYFQVQDDYLDCFGDPE 152
>gi|89675427|gb|ABD77586.1| farnesyl diphosphate synthase [Vitis vinifera]
Length = 176
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 8/177 (4%)
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGN 121
L + A +G IE + Y L+ DD+ MDN + RRG+P A G
Sbjct: 2 QLTDDEVCLACVLGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGMIAANDGV 59
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L I+ + + + + G + + I+ E +
Sbjct: 60 ILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLH 119
Query: 182 K-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +MA + + ++ +GI FQ+ DD LDC D
Sbjct: 120 RRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 176
>gi|1524345|emb|CAA65642.1| farnesyl pyrophosphate synthetase [Sphaceloma manihoticola]
Length = 212
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 14/202 (6%)
Query: 49 GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
GGK R V + +S + MD+ RRG
Sbjct: 1 GGKCNRGMSVVDTSSFLLGRPLSKDEYFKSATLGWMIELLQAFFLVSDDIMDSSKTRRGS 60
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------ 158
P ++ I +L + ++ + + + L + +
Sbjct: 61 PCWYLMPQVGMVAINDAFMLETSIYLLLKKYFRQSKHYVDLIELFHEVSFQTEMGQQCDL 120
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217
+ + D F E F++ A++ ++ + +
Sbjct: 121 LTAPEDKVDLDNFSLEKYSFIVIYKTAFYSFYLPVALALYYCELATEKNLKQAKDILIPM 180
Query: 218 GIIFQLADDLLDCEED---LPK 236
G FQ+ DD LD D L K
Sbjct: 181 GEYFQVQDDYLDNYADPETLGK 202
>gi|83773087|dbj|BAE63215.1| unnamed protein product [Aspergillus oryzae]
Length = 303
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 12/197 (6%)
Query: 39 LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ + Y L GK IR L+ + + + +H SL+ DD+ D+
Sbjct: 11 IRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQ--DS 68
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H + I + N A E + I ++ +L L G+
Sbjct: 69 SKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQGM- 127
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + + + + L
Sbjct: 128 ----DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVD----LL 179
Query: 218 GIIFQLADDLLDCEEDL 234
GIIFQ+ DD + + DL
Sbjct: 180 GIIFQIRDDYQNLQSDL 196
>gi|307166112|gb|EFN60361.1| Farnesyl pyrophosphate synthetase [Camponotus floridanus]
Length = 379
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 54/222 (24%), Gaps = 13/222 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIE 80
+ + + ++Y + GGKK R + L N +R+ +
Sbjct: 55 ITDPEVFEIPDISKWMAKVLQYNVPGGKKNRGLALVYAYKLLVPNDQLTEENIRLARILA 114
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+ L + + A N + + K
Sbjct: 115 WCVELAQAFFLLLDDIQDRSLFRRNQPCWYRHNDIGLAAVNDGTLLENALYFLIRKHFKG 174
Query: 141 NIRSQLMLSLTHNIGLQGML---------GGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+L +I L + + F + +++ +
Sbjct: 175 KECYIDILETFQHIILMTAMGQSLDLLSTNFGKKPNLNLFTMDRYNSIVKYKCSYYTFIL 234
Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A + + +G FQ+ DD LDC
Sbjct: 235 PITVAMHFAGIKDPEMLRQTKTILLEMGHFFQVQDDYLDCYG 276
>gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
Length = 171
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 67/171 (39%), Gaps = 9/171 (5%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + A +E IH +L+HDD+ +D +RRG+ T + + A++ G+ L
Sbjct: 61 VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
T AF+++ + + + + Q +
Sbjct: 119 TRAFQLMVASGSMRVLEVMADANQHYCRGRSHAADEHRQYGHYRRTIYPSH 169
>gi|310792468|gb|EFQ27995.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 377
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 59/200 (29%), Gaps = 15/200 (7%)
Query: 46 ALLGGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
LGGK R V L + A +G E + + L+ DD+ MD
Sbjct: 75 NTLGGKCNRGMSVPDSVSYLLGKPLNEEEYFQAATLGWMTELLQAFFLVSDDI--MDTSI 132
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG- 158
RRGKP + I +L A + + + L L +
Sbjct: 133 TRRGKPCWYRHEGVGMVAINDAFMLEAAIYTLLRKFFREHASYVDLLELFHEVTFQTELG 192
Query: 159 -----MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRC 212
+ + D F E F++ + A+ ++
Sbjct: 193 QLCDLLTAPEDKVNLDNFSMEKYSFIVIYKTAYYSFYLPVALALHCLNIATPKNLKQAED 252
Query: 213 FGENLGIIFQLADDLLDCEE 232
LG FQ+ DD LD
Sbjct: 253 ILIPLGEYFQIQDDYLDNFG 272
>gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
Length = 320
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 8/221 (3%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
R D IL L + S ++ +L Y L GK+ R+ L+ V T
Sbjct: 1 MSRYDNILARL--SSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDT 58
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ + +H SL+ DD+ D+ +RRGKP H Y I GN + A+ +
Sbjct: 59 LQIIAKIVNMLHSASLMVDDIE--DDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYREL 116
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ I + +++ +G + + E + + KTG L+
Sbjct: 117 LLLREP-AKGIDVEKLVTDELLSLHRGQGLELLWRDSLQCPTEDEYIDMVNNKTGGLLRI 175
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA ++QN +G+ FQ+ DDL++ +
Sbjct: 176 GIRL--MMACSTQNRDMNYIPLVNLIGVFFQIRDDLMNLQS 214
>gi|30984142|dbj|BAC53873.2| farnesyl pyrophosphate synthase [Phaseolus lunatus]
Length = 243
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + + ++ +G FQ+ DD LDC D
Sbjct: 120 HRRIVQYKTAYYSFYLPVACALLMAGDNLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPE 179
>gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
Length = 170
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
MN + ++EN ++++ + + + D L +I Y+L+ GKKIR
Sbjct: 1 MN-NFKNFIEENKDQLNSFAKEYVEKLD------MPDILKESITYSLVNDGKKIRPLSFL 53
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
+ V++ + AIE +H YSL+HDDLP MDN R GK T H + + A++
Sbjct: 54 YLLKYYEVDYTNYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDLAVLT 113
Query: 120 GNGLLTYAFEIIS 132
G+ +LT AFE++S
Sbjct: 114 GDAMLTLAFEVLS 126
>gi|154509178|ref|ZP_02044820.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
17982]
gi|153798812|gb|EDN81232.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
17982]
Length = 367
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 73/263 (27%), Gaps = 31/263 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQH-NDRLLSAIRYALLGGKKIRSFLVTECA 62
L ID L + T ++ A+ ++ GGK+ R+ +
Sbjct: 2 TLSDSFATLRPFIDEATATSLAHLLARAGTSDRSEEFSRAVLASVSGGKRFRALMAHVGY 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + + + + + Y +D RRG PT H + +
Sbjct: 62 ALSSGTSVEEVSLPHLSAALELYQASALVHDDIIDKADERRGMPTPHRRLANYHTAQSWI 121
Query: 122 GLLTYAFEIIS---------------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
G T + + + ++ ++ + LG +
Sbjct: 122 GSSTDFGQHGAILVGDFLFSAATAAADEQALTLREDCARAFSRRFADMHAEVALGQYLDI 181
Query: 167 IQDEFIDETQV----------FMIQKMKTGALMCFACESGAIMAHAS----QNEKERLRC 212
++ + + + + GAI +S + + L
Sbjct: 182 TAEQTPLDPERTDALSTSDSLEVALHKSAHYSVVHPALLGAICGASSFDRVADLLDVLET 241
Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
G+ FQL DD L D
Sbjct: 242 ILTPWGLAFQLRDDDLGVFGDPA 264
>gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
[Ornithorhynchus anatinus]
Length = 301
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L NV + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus]
gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus]
gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus]
Length = 300
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|78191061|gb|ABB29855.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
sanderae]
Length = 234
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + ++ ++ +GI FQ+ DD LDC D
Sbjct: 110 HRRIVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPE 169
>gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus]
Length = 300
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ D+
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|219669206|ref|YP_002459641.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539466|gb|ACL21205.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 326
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 15/188 (7%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ +F + T + A+E + I DD+ DN + A
Sbjct: 55 LLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA------AQA 108
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I N +L +F+ +++ Q + + ++ I + L + I Q
Sbjct: 109 INTANLILFLSFKALAAINDQALYRQANDIFQTM--GITACHGQNQEFLYEGQDAITLAQ 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----- 231
F + K+GAL C+ A++A + L FG+NLGII Q+ +DL D
Sbjct: 167 YFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRVEAK 226
Query: 232 ED--LPKK 237
D L KK
Sbjct: 227 SDVRLGKK 234
>gi|294945067|ref|XP_002784549.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
gi|239897625|gb|EER16345.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
Length = 146
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
E AI+A FG + G+ FQ+ DD+LD E D+
Sbjct: 1 MECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLDVEMDVE 43
>gi|322800772|gb|EFZ21658.1| hypothetical protein SINV_01398 [Solenopsis invicta]
Length = 352
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 15/232 (6%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNH 69
I+ D + + + D + ++Y + GGKKIRS + L N
Sbjct: 21 QDIVRDTMEMAKNLITPDVADWIEKMLQYTVPGGKKIRSLTLIYAYKSLVSKDQLTEDNI 80
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
+ +E + ++ +D+ + + + AI L +
Sbjct: 81 RLVRILAWCVELMQASLIVIEDIQNQSLLRRGQPCW-YRCNDIDKAAINDYILLQNTIYY 139
Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQVFMIQKM 183
I+ + + + + G D F + +++
Sbjct: 140 ILQKYFKDKECYVSLVETFQEALFMTVMGQYLDFFSTELSKRPNLDLFTMDRYSSIVEYK 199
Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++ + +A N ++ ++G +FQ+ D L+C D
Sbjct: 200 ESHYSVILPVVVAMHLAGIKDLNMFKQANVILLDIGHLFQVQIDYLNCFGDS 251
>gi|310792814|gb|EFQ28275.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 433
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 70/210 (33%), Gaps = 12/210 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L T + + Y + L GK RS L+ V + + + +
Sbjct: 127 LNFTRKTWPEEKEKVIAGPFDYLSALPGKDFRSQLIQAFNVWLEVPQESIDVITNVVGML 186
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DD+ D+ +RRG P H + I + N + A + + K I
Sbjct: 187 HTASLLIDDVE--DSSSLRRGLPVAHNIFGVAQTINSANYIYFRALQEVQRLKNPKAITI 244
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ ++ L G+ E + KTG L G + A
Sbjct: 245 FAEELVHLHRGQGM-----DLFWRDTLTCPTEEDYLEMVGNKTGGLF----RLGIKLMQA 295
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G+IFQ+ DD ++
Sbjct: 296 ESRSLTDCVELVNLMGLIFQIRDDYMNLSS 325
>gi|302913154|ref|XP_003050856.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731794|gb|EEU45143.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 419
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 70/213 (32%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + Y + GK R+ L+ + +V + + +
Sbjct: 115 EDLNFTAKRTWTDDKEQVVRGPYDYVISHPGKDFRAQLINAFNAWLDVPQESLDVITRVV 174
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + I+ +
Sbjct: 175 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSANYIY-----FIALQELHRL 227
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+N + S +G E + KTG L + A
Sbjct: 228 NNPDLITVFSEELVNLHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLGIKLMAAE 287
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + +G+IFQ+ DD ++
Sbjct: 288 SSVPTDCVPLV----NLIGLIFQIRDDYMNLSS 316
>gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 325
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 6/222 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
+ DTILD L Q+ +L + GK+IR L+ + NV T
Sbjct: 1 MSKYDTILDTL--SAKPTWSAQNESAILEPFTFITSNPGKEIRGKLIEAFNTWLNVPTDT 58
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDN-GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
L + + +H SL+ DD+ + ++ + L
Sbjct: 59 LLVITKVVNMLHAASLMVDDIEDDSQLRRGKPVAHKIYGIPQTINTANYVYFLAYQELFA 118
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
+ + T +++ +G + + E + + KTG L+
Sbjct: 119 LRNNPTTSPPRKDLDALVTEELLSLHRGQGLEILWRDSLQCPSEEEYISMVNNKTGGLLR 178
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +MA + N +G+ FQ+ DDL++ +
Sbjct: 179 MGVKI--MMACGTTNIGVDYVPLVNLIGVFFQIRDDLMNLQS 218
>gi|218195738|gb|EEC78165.1| hypothetical protein OsI_17735 [Oryza sativa Indica Group]
Length = 165
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ +++ A + L+ +GI FQ+ DD LDC D
Sbjct: 42 YKTAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFAD 93
>gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
Length = 957
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 64/206 (31%), Gaps = 12/206 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
S T + LL Y L GK +RS L+ + V + + + +H S
Sbjct: 658 RSDWTTYEEEILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTAS 717
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ + + ++ + Q N ++
Sbjct: 718 LLIDDIQDQSILRRGQPVAHSIFGTAQAMNS-------GNYVYFLALREVQKLQNPKAIS 770
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + +G E Q + KTG L C A + A
Sbjct: 771 IYVGSLVDLHRGQGMELFWRDSLMCPTEEQYLDMVANKTGGLFCLAVQLM----QAEATV 826
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
+ LGIIFQ+ DD L+ +
Sbjct: 827 QADFIPLVRLLGIIFQICDDYLNLKS 852
>gi|322786902|gb|EFZ13152.1| hypothetical protein SINV_08238 [Solenopsis invicta]
Length = 353
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/229 (10%), Positives = 60/229 (26%), Gaps = 12/229 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---ALR 74
I++D+ + + L ++Y + K + +V + N +
Sbjct: 23 EIINDVTKHVRNLNVPDIDKWLEKVLQYNVSE-KNLHGLIVIYAYKSISPNEQQTENNIH 81
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + ++ + + T ++A N +
Sbjct: 82 LARILAWCMEMAIAYIVTLDDIVDQSLFRRGQPCWYRRNDTGLMAINDGSLVQSTVYYLI 141
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-------TGA 187
+ + ++ + +G + F +++
Sbjct: 142 EKHFEGKECYNNLVKTFQQAIFKTQIGQFLDLTSTFKKCNLDQFTMERFNAIAKCKTEHG 201
Query: 188 LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A ++ LG ++Q+ DD LDC DL
Sbjct: 202 IYFLPTLLAMHFAEIKDPEMFKQAESILVQLGYLYQVQDDYLDCFGDLK 250
>gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi]
Length = 303
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 12/209 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ + + LL Y L GK IR L+T S + T ++ I+ +H
Sbjct: 6 LSQSSNAKEDKLLLEPFTYLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNA 65
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D+G +RRG P + E + I N ++ A E + + S+
Sbjct: 66 SLLLDDIE--DSGILRRGIPVSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSE 123
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L L G++ + E + + KTG L + + N
Sbjct: 124 QLLELHRGQGME-----IYWRDNYQCPTEKEYRQMCIRKTGGLFALGVRLMQLFSSEEGN 178
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + E LG+ FQ+ DD D
Sbjct: 179 YIQLV----ELLGLYFQIRDDFAGLVMDE 203
>gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+]
gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+]
Length = 467
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 76/213 (35%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+D L T Q + L + Y GK RS LV + V + + +
Sbjct: 163 EDFFLNTKRLWTEQKDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKVV 222
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ DN +RRG P H Y I + N + A + + K
Sbjct: 223 SMLHTASLLVDDVE--DNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPKV 280
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
NI ++ +L+L G+ E + + KTG L G +
Sbjct: 281 VNIFAEELLNLHRGQGM-----DLYWRDTLTCPTEDEYLEMVGNKTGGLF----RLGIKL 331
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +G+IFQ+ADD +
Sbjct: 332 MQAESRSLTDCIPLVNVIGLIFQIADDYQNLWS 364
>gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 384
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 67/212 (31%), Gaps = 22/212 (10%)
Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ + Y L K IR + S V ++ + + I +H SL+ DD+ DN
Sbjct: 91 VKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DN 148
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
RRG PT H + I + N AFE + ++ + + + +L GL
Sbjct: 149 SVPRRGSPTAHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQGL- 207
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ + KTG + + R F L
Sbjct: 208 ----DLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLL 262
Query: 218 GIIFQLADDLLDCEE-------------DLPK 236
G FQ+ DD + D K
Sbjct: 263 GRYFQIRDDYQNLTSAEYTSQKGFWEDLDEGK 294
>gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 263
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 21/218 (9%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
L+ ++ + + L A RY + GK +R L+ + ++++ + +
Sbjct: 11 ALERVVADLQEVGRDIKPESLRDAARYYIEKPGKMLRPILLLTFS--YSLDRRSLMDPRV 68
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
L L D V ++DE + +++S
Sbjct: 69 LQAATIVELLHIVSLLQDD----------VMDKHDERRGAKTPRVIYGDERTVLASDWLI 118
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ R+ + Q L + E + ++KT L+ A
Sbjct: 119 AESIKRAVKLGEEVVEYLA---DVAQRLSMGQALDLEGEREKAAELKTAPLIEATLVLPA 175
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ ++ E + G +LG+++Q +DDL D
Sbjct: 176 LLLKR-RDVLELAKRLGASLGVLYQYSDDL----SDEG 208
>gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
Length = 322
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 8/210 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+ L++ + + ++ Y + GK RS L+ ++ + ++ +
Sbjct: 5 EKLVKQSPIWDDRDETAIVEPYDYIVSKPGKSFRSKLINVFNEIYQIPIEKTNQISTLVA 64
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQ 137
+H SL+ DD+ D+ RRG PT H + I A N + A EI+ S
Sbjct: 65 ILHNASLLIDDIE--DSSATRRGIPTSHTLFGVPLTINAANYMYFKAMEILQTISGDDKI 122
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
L ++ + + QG+ ++ DE + + KTG L
Sbjct: 123 LLHDLMVIFNQEMINLHRGQGLDIYWRDNLLQFIPDEATYYNMVMNKTGGLFRLTVRIME 182
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL 227
++ L LGII+Q+ DD
Sbjct: 183 LL--TDVELPHSLVPLSNLLGIIYQIRDDY 210
>gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 536
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 81/302 (26%), Gaps = 73/302 (24%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHN----------------DRLLSAIRYAL-LG 49
LQ + ID L + + + RY L
Sbjct: 108 EALQAHRDEIDARLKAFAGDIDPFAFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAP 167
Query: 50 GKKIRSFL---------------------------------------VTECASLFNVNHL 70
GK+ R L + C + F+
Sbjct: 168 GKRFRPVLLLILRQALLSLNVTSRSEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQ 227
Query: 71 TALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
T + ++ +D RRG+P H ++ TAI+ G+ LL+
Sbjct: 228 TRRKDGLELCMVHVAELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSR 287
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-------------GGQMLDIQDEFID 173
I++ + S ++ SL +Q + + +
Sbjct: 288 GNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSA 347
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT +L+ +C AI+ FG +G+ FQL DD LD
Sbjct: 348 LRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTAS 407
Query: 234 LP 235
Sbjct: 408 SE 409
>gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 536
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 81/302 (26%), Gaps = 73/302 (24%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHN----------------DRLLSAIRYAL-LG 49
LQ + ID L + + + RY L
Sbjct: 108 EALQAHRDEIDARLKAFAGDIDPFAFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAP 167
Query: 50 GKKIRSFL---------------------------------------VTECASLFNVNHL 70
GK+ R L + C + F+
Sbjct: 168 GKRFRPVLLLILRQALLSLNVTSRSEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQ 227
Query: 71 TALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
T + ++ +D RRG+P H ++ TAI+ G+ LL+
Sbjct: 228 TRRKDGLELCMVHVAELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSR 287
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-------------GGQMLDIQDEFID 173
I++ + S ++ SL +Q + + +
Sbjct: 288 GNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSA 347
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT +L+ +C AI+ FG +G+ FQL DD LD
Sbjct: 348 LRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTAS 407
Query: 234 LP 235
Sbjct: 408 SE 409
>gi|45190369|ref|NP_984623.1| AEL238Cp [Ashbya gossypii ATCC 10895]
gi|74693865|sp|Q758K0|GGPPS_ASHGO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|44983265|gb|AAS52447.1| AEL238Cp [Ashbya gossypii ATCC 10895]
Length = 320
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 63/204 (30%), Gaps = 5/204 (2%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ L + + GK R+ L+ + ++ V +E +H SL+
Sbjct: 14 WTASQEELLRQPYNHLVTQPGKNFRNTLIRVFNGFYGLSERQVAAVTELVEMLHVASLLI 73
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ DN RRG H+ Y I N + + ++ Q L+
Sbjct: 74 DDIE--DNSAWRRGVAAAHVVYGSPMTINTANYMYFVSMSLLGQLAAQRPAGPLQDLLKV 131
Query: 150 LTHNIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ +G E + KTG L +
Sbjct: 132 FNEEMMNLHRGQGLDIYWRDTFTVPSEHDYLRMVMHKTGGLFRLTVRIMEALREGPDGPG 191
Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
L LG+++Q+ DD L+
Sbjct: 192 STLVPLSNLLGVLYQVRDDYLNLT 215
>gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae]
Length = 362
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 67/212 (31%), Gaps = 22/212 (10%)
Query: 39 LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ + Y L K IR + S V ++ + + I +H SL+ DD+ DN
Sbjct: 69 VKAPYNYINTLPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DN 126
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
RRG PT H + I + N AFE + ++ + + + +L GL
Sbjct: 127 SVPRRGSPTAHTLFGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQLKNLHCGQGL- 185
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ + KTG + + R F L
Sbjct: 186 ----DLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLL 240
Query: 218 GIIFQLADDLLDCEE-------------DLPK 236
G FQ+ DD + D K
Sbjct: 241 GRYFQIRDDYQNLTSAEYTSQKGFWEDLDEGK 272
>gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like
[Acyrthosiphon pisum]
Length = 327
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 12/207 (5%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D + S H +LL Y + + GK+IR+ L + +G ++
Sbjct: 18 DRNWEIVSLKPQFHIIKLLQPFTYIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQ 77
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SL+ DD+ DN +RRG P H Y + I A N + A E S +
Sbjct: 78 MLHNSSLLTDDIQ--DNSVLRRGIPVAHSIYGVASTINAANYMSFVALERTLSLGHPMAT 135
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ ++ +L L G++ E + + KTG L A + +
Sbjct: 136 TVYTEQVLELHRGQGME-----IYWRDNYTCPTEDEYKKMTIRKTGGLFMLAIRLMQLFS 190
Query: 201 HASQNEKERLRCFGENLGIIFQLADDL 227
S N+ +L LG+ FQ+ DD
Sbjct: 191 D-STNDFTKLTGI---LGLYFQIRDDY 213
>gi|13641224|gb|AAK31630.1| geranyl-geranyl diphosphate synthase-like [Leptomonas sp. F6]
Length = 173
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
I KTG C ++ A + + FG LG+ FQ+ D L+ E DL
Sbjct: 73 IHTYKTGGAAGTLCAMACVLCDAPPDVSVAMESFGRALGLAFQIVDAALNVSGFEGDLK 131
>gi|268569452|ref|XP_002640526.1| Hypothetical protein CBG18688 [Caenorhabditis briggsae]
gi|187024775|emb|CAP36098.1| CBR-FDPS-1 protein [Caenorhabditis briggsae AF16]
Length = 351
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 27/247 (10%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFLVT 59
K ++T L ++ + + + + Y ++GGK R+ L
Sbjct: 5 RKLVETALGEVKKKFVRVVSAKLP---ADGMEYDLVQYRCKNLFDNTVIGGKYSRASLCV 61
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDL-----PSMDNGYIRRGKPTVHIQYDEV 114
+ + + A+ I MDN RRGKP +
Sbjct: 62 DTIRALQPHLREETQELQAVCEAAATLEIIQSFYLIADDIMDNSETRRGKPCWFRREGVG 121
Query: 115 TA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
+ I + ++ +I+ + R + L G Q
Sbjct: 122 MSAINDAFIMDSFVEDILRLALPGHINLDRLCEAYRKSKQKTLIGQFLDTSSVNQIASFT 181
Query: 174 ETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ + KT F + I++ ++ +G +FQ DD LD
Sbjct: 182 WDRYELMVENKTSHYTVFHPLQMALIISDV-LAYHGSVKKAAYQIGFLFQSQDDFLDVYG 240
Query: 233 D---LPK 236
D K
Sbjct: 241 DPKVTGK 247
>gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC
30864]
Length = 314
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 12/202 (5%)
Query: 32 QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
Q LL Y GK++R+ L+ ++ + ++ +H SL+ D
Sbjct: 3 SEQQQKTLLEPYTYLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLID 62
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ DN +RRG P H+ Y + I N ++ + + + +
Sbjct: 63 DIE--DNSKLRRGVPVAHLIYGVPSTINCANYAY-----FLALERVLKLNKPEAVAAFTE 115
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
+G + E + + K KTG L + + N L
Sbjct: 116 ELLELHRGQGLDIWWRDSNVCPTEEEYREMVKRKTGGLFRLSVRLMQAFSENRSNFVPLL 175
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
LG+ FQ+ DD + E
Sbjct: 176 D----ALGLYFQIRDDFANLES 193
>gi|169867072|ref|XP_001840117.1| farnesyldiphosphatesynthetase [Coprinopsis cinerea okayama7#130]
gi|116498669|gb|EAU81564.1| farnesyldiphosphatesynthetase [Coprinopsis cinerea okayama7#130]
Length = 402
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 66/262 (25%), Gaps = 40/262 (15%)
Query: 10 QENSKRID----TILDDLLLQTA-SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
R + I D++L HM + + + + Y + GGK R V + +
Sbjct: 5 AARRARFEGAWNEIRDEILAYFQGEHMPPEAVEWYKNNLDYNVPGGKLNRGMSVCDTVQI 64
Query: 65 FNVNH--LTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+ A + MD RRG+P + I
Sbjct: 65 LKGRELTDEEYKRAAVLGWCVELLQGFFLVSDDIMDASITRRGQPCWYRVPKVGMLAIND 124
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDE 174
+ +L + + + + L + + + + +F E
Sbjct: 125 SFMLEAPIYWLIKKYFRRESFYADLVDLFHETTYQTEMGQLVDLITAPEDVVDLSKFSLE 184
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE------------------------RL 210
++ ++ EKE L
Sbjct: 185 RHRLIVVYKTAYYSFYLPVACAMMICGIPFPEKEPRFDFLNGGFGGAPLDPTADPYTTAL 244
Query: 211 RCFGENLGIIFQLADDLLDCEE 232
LG FQ+ DD LD
Sbjct: 245 S-ILIPLGEYFQVQDDYLDYSA 265
>gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus
cuniculus]
Length = 300
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus
norvegicus]
Length = 267
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ D+
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + ++ K L L
Sbjct: 129 ----DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT----L 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|71041843|pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R44a Mutant
gi|71041844|pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
From Hyperthermophilic Thermotoga Maritima R44a Mutant
Length = 299
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 25/225 (11%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
+L++ +RI+ IL + ++ L GK + L V
Sbjct: 12 ELEKVKERIEQILSQFFPE--------------QIMKDLPLYGKMLAVRLSILSFKNRGV 57
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
A + + + D + R + + D+
Sbjct: 58 EIGEDAISSLAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAG-------- 109
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
++ S +++ ++L + + IG + + I + + I + K+GA
Sbjct: 110 DLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGA 169
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
L A + A++ E L G +G I+Q+ DD++D
Sbjct: 170 LFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211
>gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 254
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL---------------------- 39
+ L + L +D LD ++ T +
Sbjct: 68 DFDLKTYLGTKKDSVDKALDKAVVSTMPQTDQDVVSGVPTDQKCIGWCLLAWRTERKASL 127
Query: 40 --------------LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
++I Y+L GGK++R L +F + A+ + E IH
Sbjct: 128 ALGRGQRGVWTAVSRASIHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHT 187
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
SLIHDDLP+MD+ +RRG PT H++Y E AI+AG+ LL+ +FE +
Sbjct: 188 MSLIHDDLPAMDDDDLRRGMPTCHVKYGEDIAILAGDALLSKSFEHCA 235
>gi|42572937|ref|NP_974565.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
dimethylallyltranstransferase/ geranyltranstransferase
[Arabidopsis thaliana]
gi|332658459|gb|AEE83859.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana]
Length = 247
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 95 MDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
MDN RRG+P + AI G L + I+ ++ + + +
Sbjct: 1 MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 60
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKE 208
G + + E I + +MA +
Sbjct: 61 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 120
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
++ ++GI FQ+ DD LDC D L K
Sbjct: 121 DVKTVLVDMGIYFQVQDDYLDCFADPETLGK 151
>gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum]
Length = 300
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 73/212 (34%), Gaps = 13/212 (6%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + S T LL +Y GK +R+ L+ V V + ++ +
Sbjct: 1 MNKQFSFPLTDKEAVLLEPYKYITETPGKGVRALLIESFNHWLKVEDRVVKEVSSLVQSL 60
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DD+ DN +RRG PT H Y I N + +S + N
Sbjct: 61 HMSSLLIDDIE--DNSLLRRGTPTAHTLYGVPQTINCANFVY-----FLSIEQCMRLGNH 113
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ + +G E + + K KTG L G +
Sbjct: 114 QATQVYIEELVRSHRGQGWDIYWRDNQICPTEDEYKSMVKDKTGGLF----RMGLRVLQC 169
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD-CEED 233
K +NL + +Q+ DD L+ D
Sbjct: 170 FSENKTDYTLLIDNLALYYQIRDDYLNLVSGD 201
>gi|312381025|gb|EFR26873.1| hypothetical protein AND_06760 [Anopheles darlingi]
Length = 479
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 65/239 (27%), Gaps = 9/239 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC---- 61
S+ ++ ++ DL + + + A++Y + GKK R
Sbjct: 141 KSESRDFMAVFPDLVRDLTEYGRKYDKNVATKWFVRALQYNVPQGKKNRGLASVLAYRML 200
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A ++ R CI + + + +G R D+V + +
Sbjct: 201 AKHEDLTPENIRRAQYLGWCIEMLHSMFLMIDDIMDGSAMRRGQPAWHTLDDVKMVAIND 260
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
G++ A K + ++ Q + ++ +
Sbjct: 261 GIMIDAAIFYVIKKHFGNEPYYARLLEEFSEIKFITTIGQSLDLLSAKMDVTQYTMDVYK 320
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ M + + +G +Q DD LDC D
Sbjct: 321 SIVFHKTAYYTFYLPVAMAMHMTGYTDPEMFRQAKTILLEIGQFYQAQDDFLDCFGDPA 379
>gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
gondii ME49]
gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
gondii ME49]
Length = 536
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 81/302 (26%), Gaps = 73/302 (24%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHN----------------DRLLSAIRYAL-LG 49
LQ + ID L + + + RY L
Sbjct: 108 EALQAHRDEIDARLKAFAGDIDPFAFVRDDVESLDLSLLSSVRSVYPEVSPVARYLLTAP 167
Query: 50 GKKIRSFL---------------------------------------VTECASLFNVNHL 70
GK+ R L + C + F+
Sbjct: 168 GKRFRPVLLLILRQALLSLNVTSRSEPGDESASLRSRSLSPSGSASPLLSCGAAFSAKSQ 227
Query: 71 TALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
T + ++ +D RRG+P H ++ TAI+ G+ LL+
Sbjct: 228 TRRKDGLELCMVHVAELIHTASLMHDDVIDGADTRRGQPATHRRFCNKTAILGGDFLLSR 287
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-------------LDIQDEFID 173
I++ + S ++ SL +Q + + +
Sbjct: 288 GNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESTEPLREHLKRKSA 347
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
KT +L+ +C AI+ FG +G+ FQL DD LD
Sbjct: 348 LRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTAS 407
Query: 234 LP 235
Sbjct: 408 SE 409
>gi|209570224|emb|CAP74388.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
Length = 393
Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 10/210 (4%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + ++Q S Y L L K IR + +V A + I+ +
Sbjct: 81 ISELNHRWKSQRLKVADSPYNYILTLPSKGIRGAFIDSLNVWLDVPEDKAQVIKDVIDML 140
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SLI DD + + + + + Q +
Sbjct: 141 HNSSLIIDDFQDGSPLRRGKPSTHTVFGPAQAINTATYIIVK-------AIERIQEIVSH 193
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ ++ T QG + ++ KTGAL + E A+ + A
Sbjct: 194 DALADITGTITTIFQGQAMDLWWTANTILQSIQEYLLMVNDKTGALFRLSLELLALNSEA 253
Query: 203 --SQNEKERLRCFGENLGIIFQLADDLLDC 230
S + E L LG FQ+ DD ++
Sbjct: 254 PISDSTLESLSSVVSLLGQYFQIRDDYMNL 283
>gi|255988559|gb|ACU51163.1| farnesyl pyrophosphate synthase [Nicotiana tabacum]
Length = 234
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + ++ ++ +GI FQ+ DD LDC D
Sbjct: 110 HRRIVQYKTAYYSFYLPAACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPE 169
>gi|293189826|ref|ZP_06608540.1| polyprenyl synthetase [Actinomyces odontolyticus F0309]
gi|292821241|gb|EFF80186.1| polyprenyl synthetase [Actinomyces odontolyticus F0309]
Length = 367
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 72/263 (27%), Gaps = 31/263 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQH-NDRLLSAIRYALLGGKKIRSFLVTECA 62
L ID L + T ++ A+ ++ GGK+ R+ +
Sbjct: 2 TLSDSFATLRPFIDEATATSLAHLLARAGTSDRSEEFSRAVLASVSGGKRFRALMAHVGY 61
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
+L + + + + + Y +D RRG P+ H +
Sbjct: 62 ALSSGTSIEEVSLPHLSAALELYQASALVHDDIIDKADERRGMPSPHRTLANYHTAQSWI 121
Query: 122 GLLTYAFEIIS---------------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
G T + + ++ ++ + LG +
Sbjct: 122 GSSTDFGRHGAILVGDFLFSAATAAADEQALTLREDCARAFSRRFADMHAEVALGQYLDI 181
Query: 167 IQDEFIDETQV----------FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
++ + + + + GAI +S + L E
Sbjct: 182 TAEQTPLDPERTDALSTSDSLEVALHKSAHYSVVHPALLGAICGASSFDRVADLLDVLET 241
Query: 217 L----GIIFQLADDLLDCEEDLP 235
L G+ FQL DD L D
Sbjct: 242 LLTPWGLAFQLRDDDLGVFGDPA 264
>gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa]
Length = 300
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
Synthase Bound To Ggpp
Length = 301
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 13 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 70
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 71 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 129
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 130 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 181
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 182 GLFFQIRDDY 191
>gi|33772137|gb|AAQ54505.1| geranylgeranyl pyrophosphate synthase [Malus x domestica]
Length = 84
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
Q+ K G + + G ++ A +E +RLR +G +G+++++ DD+L
Sbjct: 1 QEKKFGEMSQCSAVCGGLLGGAEDDELDRLRRYGRAVGVLYRVVDDIL 48
>gi|159125980|gb|EDP51096.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus A1163]
Length = 347
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 13 SKRIDTIL----DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECAS 63
+ + +DLL + ++ + + + GGK R V
Sbjct: 7 RAAFEAVFPTLAEDLLAHAKKYNLPENAVKWFEQVLNVNVPGGKLNRGLSVPDTGIALLQ 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + MD+ RRG+P + I +
Sbjct: 67 KPLTDEQFKHLSILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +I ++ +L T L + +D +
Sbjct: 127 LESGIYVILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYM 186
Query: 182 KMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ T ++ +A + ++ LG FQ+ DD LD D
Sbjct: 187 FIVTYKTAYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPA 245
>gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis
familiaris]
Length = 300
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + + + + + + +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|70985182|ref|XP_748097.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293]
gi|66845725|gb|EAL86059.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293]
Length = 347
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 13 SKRIDTIL----DDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLV----TECAS 63
+ + +DLL + ++ + + + GGK R V
Sbjct: 7 RAAFEAVFPTLAEDLLAHAKKYNLPENAVKWFEQVLNVNVPGGKLNRGLSVPDTGIALLQ 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + MD+ RRG+P + I +
Sbjct: 67 KPLTDEQFKHLSILGWLTELLQAFFLVSDDMMDSSITRRGQPCWYRHPGVGLIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L +I ++ +L T L + +D +
Sbjct: 127 LESGIYVILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYM 186
Query: 182 KMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ T ++ +A + ++ LG FQ+ DD LD D
Sbjct: 187 FIVTYKTAYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGDPA 245
>gi|302909459|ref|XP_003050078.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731015|gb|EEU44365.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 347
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 70/240 (29%), Gaps = 14/240 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ LQE + L++ LL+ A + + D ++ LGGK R V + S
Sbjct: 4 KTTLQEF-NSVYPKLEEALLEHARSYKLPQEQLDWYKRSLEINPLGGKCNRGMSVPDSVS 62
Query: 64 L----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
L + MD+ RRG+P + Q I
Sbjct: 63 LLLEKPLSEEQYFQSATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAIN 122
Query: 120 GNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+L A + ++ +L T L + +D +
Sbjct: 123 DAFMLEAAIYTLLKKYFRSHPAYVDLIELFHETTFQTELGQLCDLLTAPEDKVDLDNFSM 182
Query: 178 FMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ ++ LG FQ+ DD LD
Sbjct: 183 EKYSFIVIYKTAYYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDNFG 242
>gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda
melanoleuca]
Length = 300
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + + +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens]
Length = 300
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 73/190 (38%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + Q + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Pan troglodytes]
gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Pan troglodytes]
gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan
troglodytes]
gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Pan troglodytes]
gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens]
gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens]
gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens]
gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens]
gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens]
gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens]
gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
Length = 300
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Macaca mulatta]
gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Macaca mulatta]
gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Macaca mulatta]
gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Macaca mulatta]
Length = 300
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|46241300|gb|AAS82870.1| geranyl diphosphate synthase small subunit [Clarkia breweri]
Length = 300
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 87/227 (38%), Gaps = 26/227 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLF 65
+ L I+ +D L + + + + + + L + L L
Sbjct: 28 ATLSTYWDSINDKIDGHL---KAAVPVRKPLSVFEPLHHLTLAAPRSSAPALCIAACELV 84
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ A+ AA+ IH +H L + + ++ G+G+L
Sbjct: 85 GGSSSQAMDAAAALHLIHASLSVHKRLY----------RGGSGSGFGSNIELLTGDGMLP 134
Query: 126 YAFEIISSPK---TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---------DEFID 173
AFE++++ + + + ++++ ++ G +G+L G+ ++Q ++ D
Sbjct: 135 LAFELLANSEGAGDESRSRRILRVIVEISKAAGSEGLLKGEYNELQLGRLAGFTGGDWRD 194
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ + K G L A G I+ ++ E E+LR G +G+I
Sbjct: 195 AFWMDHVCGKKEGGLHACAAACGGILGGGTEEEIEKLRKLGYLVGMI 241
>gi|330903723|gb|EGH34295.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 89
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 213 FGENLGIIFQLADDLLDCEED---LPKK 237
+ +G+ FQ+ DD+LD E D L K+
Sbjct: 4 YARAIGLAFQVQDDILDVESDTATLGKR 31
>gi|89894766|ref|YP_518253.1| hypothetical protein DSY2020 [Desulfitobacterium hafniense Y51]
gi|89334214|dbj|BAE83809.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 288
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 15/188 (7%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ +F + T + A+E + I DD+ DN + A
Sbjct: 17 LLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA------AQA 70
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I N +L +F+ +++ Q + + ++ I + L + I Q
Sbjct: 71 INTANLILFLSFKALAAINDQALYRQANDIFQTM--GITACHGQNQEFLYEGQDAITLAQ 128
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----- 231
F + K+GAL AC+ ++A + L FG+NLGII Q+ +DL D
Sbjct: 129 YFDTARKKSGALTAGACKLAGVLAGCDTSLILDLDKFGQNLGIISQIKNDLQDLFRVEAK 188
Query: 232 ED--LPKK 237
D L KK
Sbjct: 189 SDVRLGKK 196
>gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus
caballus]
Length = 299
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYEYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Nomascus leucogenys]
gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Nomascus leucogenys]
gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
[Nomascus leucogenys]
gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Nomascus leucogenys]
Length = 300
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+ DN
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + + KTG L A + + + KE L+ L
Sbjct: 129 ----DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|41053321|ref|NP_956329.1| geranylgeranyl pyrophosphate synthase [Danio rerio]
gi|30353819|gb|AAH52115.1| Geranylgeranyl diphosphate synthase 1 [Danio rerio]
Length = 327
Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 12/202 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ LL +Y L L GK++R+ L NV + E +H
Sbjct: 1 MDEKQRATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNA 60
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D+ +RRG P H Y + I + N + E + + + ++
Sbjct: 61 SLLIDDIE--DSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTR 118
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L L GL E + + KTG L A + + ++
Sbjct: 119 QLLELHRGQGL-----DIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRD 173
Query: 206 EKERLRCFGENLGIIFQLADDL 227
K L LG+ FQ+ DD
Sbjct: 174 LKPLLDT----LGLYFQIRDDY 191
>gi|328768663|gb|EGF78709.1| hypothetical protein BATDEDRAFT_17386 [Batrachochytrium
dendrobatidis JAM81]
Length = 365
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 66/228 (28%), Gaps = 12/228 (5%)
Query: 17 DTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS------LFNVNH 69
D I DLL A + + + + + + GGK R V L
Sbjct: 34 DVISKDLLDGLALYRLPENGKQWIRNMLDATVPGGKMNRGLTVPSALESILKRELTADEL 93
Query: 70 LTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ +G IE + + LI DD+ G K + I +
Sbjct: 94 FQSQVLGWCIEFLQAFFLISDDIMDGSLTRRGQPCWYKKENVGMVAINDSFIVEAAIYQM 153
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT- 185
+ + + T L ++ D+ + + I + KT
Sbjct: 154 LKKYFKTHPAYGDFLELFHEVTYQTELGQLMDLITAPEGDVDLDRFSIEKHAYIVEFKTA 213
Query: 186 GALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEE 232
+A ++ + R LG FQ+ DD LDC
Sbjct: 214 YYSFYLPIALAMRLAGITEERAYIQARDVLLPLGEYFQVQDDYLDCYG 261
>gi|119573460|gb|EAW53075.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
dimethylallyltranstransferase, geranyltranstransferase),
isoform CRA_a [Homo sapiens]
Length = 248
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 1/53 (1%)
Query: 182 KMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ MA + E + +G FQ+ DD LD D
Sbjct: 94 YKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGD 146
>gi|188501751|gb|ACD54843.1| farnesyl pyrophosphate syntethase [Olea europaea]
Length = 190
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 21/60 (35%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +M+ + + ++ +G FQ+ DD LDC D
Sbjct: 31 HCRIVQYKTAYYSFYLPVACALLMSGENLDNHVDVKNVLVEMGTYFQVQDDYLDCFGDPE 90
>gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens]
Length = 318
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
Q T +L+ +C++ +++ E +G+N+GI FQL DD+ D
Sbjct: 159 HERFAQYLEKTFKNTASLIANSCKAVSVLGCPDPVVHEITYQYGKNVGIAFQLIDDVFDF 218
Query: 231 EE 232
Sbjct: 219 TS 220
>gi|156044020|ref|XP_001588566.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980]
gi|154694502|gb|EDN94240.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 378
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 66/206 (32%), Gaps = 12/206 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
S + L Y GK IR L+ V + + + +H S
Sbjct: 82 RSSWAPEKEKILFGPYDYLEAHPGKDIRKQLIAAFNEWLEVPPESLEVITKVVGMLHTAS 141
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ D+ +RRG P H + I + N + A + + I ++
Sbjct: 142 LLVDDVE--DSSLLRRGLPVAHSIFGTAQTINSANYVYFCALQELQKLNNPQAITIYTEE 199
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + KTG L A + A
Sbjct: 200 LLNLHRGQGM-----DLFWRDSLTCPTEDDYLEMVGNKTGGLFRLAVKLM----QAESKT 250
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
+GIIFQ+ DD +
Sbjct: 251 SRDCVPLVNLIGIIFQIRDDYQNLSS 276
>gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase [Glycine max]
Length = 283
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 6/199 (3%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIE 80
D+ + + + + + + L L + A+ +A+
Sbjct: 49 DIEAHLKQTIPLKEPLEVFEPMLHLAFSAPRTTVPALCLAACELVGGHRQQAMAAASALL 108
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+ H+ L D + A +SP+ L+
Sbjct: 109 LNLANAHAHEHLT--DGPMYGPNIELLTGDGIVPFGFELLARPDGPAS---ASPERVLRV 163
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I + Q + ++ E+ + + + G L SGAI+
Sbjct: 164 MIEISRAVGSVGLQDAQYVKKTLWDGGEEVQNVESMQRFVLEKRDGGLHACGAASGAILG 223
Query: 201 HASQNEKERLRCFGENLGI 219
S+++ ERLR FG ++G+
Sbjct: 224 GGSEDQIERLRNFGFHVGM 242
>gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
Length = 349
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 7/192 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + A+ A+E IH +SLIHDD+ MD RR +PT+
Sbjct: 60 GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
Y A++AG+ L A ++ + L + Q +L
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWT 177
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + KTG+L+ A GA++A A + E L G ++G+ FQ DDL
Sbjct: 178 GPGAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDL 237
Query: 228 LDCEED---LPK 236
L D K
Sbjct: 238 LGIWGDPQVTGK 249
>gi|221508116|gb|EEE33703.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii VEG]
Length = 646
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + +G FQ+ DD LDC D K
Sbjct: 495 KTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSDPKISGK 552
>gi|221486332|gb|EEE24593.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii GT1]
Length = 646
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + +G FQ+ DD LDC D K
Sbjct: 495 KTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSDPKISGK 552
>gi|237833653|ref|XP_002366124.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii
ME49]
gi|211963788|gb|EEA98983.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii
ME49]
Length = 646
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + +G FQ+ DD LDC D K
Sbjct: 495 KTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSDPKISGK 552
>gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 349
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 7/192 (3%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L A + A+ A+E IH +SLIHDD+ MD RR +PT+
Sbjct: 60 GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
Y A++AG+ L A ++ + L + Q +L
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQLAGALGDLVHGQAQDLLFESRPWT 177
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + KTG+L+ A GA++A A + E L G ++G+ FQ DDL
Sbjct: 178 GPGAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDL 237
Query: 228 LDCEED---LPK 236
L D K
Sbjct: 238 LGIWGDPQVTGK 249
>gi|108745448|gb|ABG02859.1| farnesyl diphosphate synthase [Toxoplasma gondii]
Length = 646
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + +G FQ+ DD LDC D K
Sbjct: 495 KTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSDPKISGK 552
>gi|95107368|gb|AAP34308.2| farnesyl diphosphate synthase inactive form [Toxoplasma gondii]
Length = 605
Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + + +G FQ+ DD LDC D K
Sbjct: 495 KTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSDPKISGK 552
>gi|294997085|dbj|BAJ05823.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
Length = 412
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 74/213 (34%), Gaps = 11/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + Y GK RS L+ +L V + A+
Sbjct: 114 EDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITTAV 173
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + + +
Sbjct: 174 GMLHDSSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANFIYYAQLQELQKLGNPSI 231
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + ++SL G+ + E + KTG L +
Sbjct: 232 ISVFADELVSLHRGQGM-----DLFWRDKLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 286
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +S + L +G+IFQ+ DD ++
Sbjct: 287 SPSSSLDCVPLVNL---IGLIFQIRDDYMNLSS 316
>gi|315604555|ref|ZP_07879618.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313567|gb|EFU61621.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 367
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 70/267 (26%), Gaps = 34/267 (12%)
Query: 4 GLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL----- 57
L ID + L + + A+ A GGK+ R+ +
Sbjct: 2 SLSDSFSVLRPLIDEATSEHLSGLLVRAGASTRGEEFTQAVLSAASGGKRFRALMAHVGY 61
Query: 58 VTECASLFNVNHLTA--------LRVGAAIECIHCYSLIHDDLPS----MDNGYIRRGKP 105
L + I + P+ + + + RR
Sbjct: 62 CLGAGLALGEVFLPHLSAALELYQASALVHDDIIDRANERRGAPTPHRLLADHHGRRRWM 121
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ E AI+ G+ L + A + + L + + +
Sbjct: 122 GSPTDFGEHAAILVGDFLFSAATDAADAQALLLDEAAAQSFTRRFADMHAEVALGQYLDI 181
Query: 166 DIQDEFIDETQVFMI---------QKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
+ +D + + + GAI A A + L ++
Sbjct: 182 VAEQTPLDPHRDDAVSGADALDVALHKSAHYSVVHPAALGAICASAPPGQVSTLLAILDS 241
Query: 217 L----GIIFQLADDLLDCEED---LPK 236
+ G+ FQL DD L D K
Sbjct: 242 VLTPWGLAFQLRDDDLGVFGDPQVTGK 268
>gi|326480620|gb|EGE04630.1| farnesyl pyrophosphate synthetase [Trichophyton equinum CBS 127.97]
Length = 347
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 57/236 (24%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECAS 63
+ + + L+ + H + + L + GGK R V
Sbjct: 7 REDFNKVFPALVQDISEHAKQYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ MD+ RRG+P + + I +
Sbjct: 67 KPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRPGVGMIAINDAFM 126
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQV 177
L + ++ + + + L + + + + F +
Sbjct: 127 LESSIYVLLKKHFRSHPAYINLVELFHETTFQTELGQLCDLITAPEDNVDLNNFNMDKFN 186
Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ A+ + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum
PN500]
Length = 300
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 12/205 (5%)
Query: 29 SHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
S+ ++ + LL +Y + GK IR+ L+ V+ +V ++ +H SL
Sbjct: 6 SYPLSEKDVALLEPYKYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQALHMSSL 65
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ DN +RRG P H Y I N + A + + I + M
Sbjct: 66 LIDDIE--DNSKLRRGMPVAHDIYGYAQTINCANTVYFLAMDECNKLGKPAATTIFIEEM 123
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ L G + ++ E + L K
Sbjct: 124 IRLHRGQGYDILWRDTNSCPTEDEYKEMVGEKTGGLFRLGLRLL---------QTFSENK 174
Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
E+LG+ +Q+ DD ++
Sbjct: 175 TDYSKLVEDLGLYYQIRDDYINLVS 199
>gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
Length = 172
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 18/147 (12%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN------------ 66
LD++ + + L A+RYA+L GGK++R LV +
Sbjct: 21 LDEVERALGNWVGDGAPAGLGEAMRYAVLDGGKRLRPLLVLAAFEAVHGEAVAAGAADGN 80
Query: 67 -----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
ALR A+E IH YSL+HDD+P MDN +RRGKPTVH+Q+ E A++AG+
Sbjct: 81 AALRAGMQAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGD 140
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLML 148
L +AFE+++ ++ +++ L
Sbjct: 141 ALQAFAFELLTPEDERIPPAVQATLCR 167
>gi|90080788|dbj|BAE89875.1| unnamed protein product [Macaca fascicularis]
Length = 105
Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ E +G+N+GI FQL DD+LD
Sbjct: 15 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 49
>gi|67522270|ref|XP_659196.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
gi|40745143|gb|EAA64299.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
gi|259486923|tpe|CBF85177.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 397
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 11/211 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + + + + + + Y + GK+IR L+ + V+ + + +
Sbjct: 89 DTIDEKLSMYWKAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQSCQAIATTV 148
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
H SL+ DD+ D+ +RRG P H + I + N + A + ++
Sbjct: 149 GMAHNASLLIDDIQ--DSSKLRRGVPCAHEVFGIAQTINSANYVYFLAQNQLFRLRSW-- 204
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + + +G + KTG L +
Sbjct: 205 --PQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLF----RMIVRL 258
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
S + + + LG+ FQ+ DD +
Sbjct: 259 LQTSSRQVIDVEQLVDVLGLYFQILDDYKNI 289
>gi|322710216|gb|EFZ01791.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
23]
Length = 431
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 74/213 (34%), Gaps = 11/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + Y GK RS L+ +L V + A+
Sbjct: 124 EDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAV 183
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 184 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSI 241
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + ++SL G+ E + KTG L +
Sbjct: 242 ISVFADELVSLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 296
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +S + L +G+IFQ+ DD ++
Sbjct: 297 SPSSSLDCVPLVNL---IGLIFQIRDDYMNLSS 326
>gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
[Callithrix jacchus]
gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
[Callithrix jacchus]
Length = 300
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 56/190 (29%), Gaps = 12/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL +Y L L GK++R+ L V + E +H SL+ DD+
Sbjct: 12 LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSK 71
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+ K D+ + + + Q
Sbjct: 72 LRRGFPVAHSIYGIP-------SVINSANYVYFLGLEKVLTLDHPDAVKLFTCQLLELHQ 124
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
G E + + KTG L A + + + KE L+ L
Sbjct: 125 GQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTL 180
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 181 GLFFQIRDDY 190
>gi|119181731|ref|XP_001242054.1| hypothetical protein CIMG_05950 [Coccidioides immitis RS]
Length = 404
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 58/213 (27%), Gaps = 7/213 (3%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ + LL Y + GK IR L+ V + + +
Sbjct: 75 KTVISNIDGMWSAEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVV 134
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQ 137
+H SL+ + M + + I + ++ + Q
Sbjct: 135 LMLHTASLLANSPVLMCSVDDVEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQ 194
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
N + + + +G E + KTG L A +
Sbjct: 195 KLRNADAIGIFTTELLNLHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLM- 253
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A +G+IFQ+ DD L+
Sbjct: 254 ---QAESEVSVDCIPLVNLMGLIFQICDDYLNL 283
>gi|39948036|ref|XP_363065.1| farnesyl pyrophosphate synthetase [Magnaporthe oryzae 70-15]
gi|145010274|gb|EDJ94930.1| farnesyl pyrophosphate synthetase [Magnaporthe oryzae 70-15]
Length = 348
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 72/240 (30%), Gaps = 14/240 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV--TEC 61
+ LQE + + L+++LL+ A + ++ +GGK R V +
Sbjct: 5 KTTLQEF-EAVFPKLEEVLLEHAKSYKLPQGEMAWYKKSLETNAIGGKCNRGMSVPDSVS 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
A L A + + MD+ RRG+P + Q I
Sbjct: 64 ALLERPLSEDEYFKAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQDGVGMVAIN 123
Query: 120 GNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+L A + + +L +T+ + + +D +
Sbjct: 124 DAFMLEAAIYTLLKKFFRDHPAYVDLLELFHEVTYQTEIGQLCDLLTAPEDKVNLDNFSM 183
Query: 178 FMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + ++ +A + + +G FQ+ DD LD
Sbjct: 184 EKYRFIVIYKTAYYSFYLPVALALHQLNIGTPENLKVAEDILIPMGEYFQVQDDYLDNFG 243
>gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66]
gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium
muris RN66]
Length = 505
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/289 (15%), Positives = 82/289 (28%), Gaps = 61/289 (21%)
Query: 3 GGLPSKLQENSKRIDTILDD------LLLQTASHMQTQHNDRLLSAIRYALL-------- 48
+ L+++ + + + + L+ S + +LL + L
Sbjct: 104 SEIEDILKDSLQGFEDYIKENSVCSQFLISFISKERDYQKSKLLEIMSSYLPNSLQNVIN 163
Query: 49 -----GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI-------------HCYSLIHD 90
GK R L N + E +
Sbjct: 164 YISEIPGKLTRPELCFLIFLCMNNSSNEISIESLKSEIQLNSSQRILIKALEMIHIASLL 223
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------ 144
+D IRRGK + H+++ AI+ G+ L + A ++ + S
Sbjct: 224 HDDIVDESDIRRGKTSTHLKFGNKIAILTGDFLFSRACHSVAFLENINAMKHVSLIVEGL 283
Query: 145 -------QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
L + + + + + ID +M + + S
Sbjct: 284 VRGELLQYNDLREFLDEIKENLDEMKNQNSTTTQIDIFNKYMKNYLSKIYYKTASLMSHG 343
Query: 198 IMAHASQN----------------EKERLRCFGENLGIIFQLADDLLDC 230
+ A N +K+ + G N GI FQL DDLLD
Sbjct: 344 VSACVEVNGMQQSSNLIGNELFNIKKKTIFNIGLNFGIAFQLLDDLLDI 392
>gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 83/230 (36%), Gaps = 20/230 (8%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L++ + + D + S Y GK RS LV + ++ L + + +
Sbjct: 7 LVEGKPIWSSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGIL 66
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--------- 133
H SL+ DD+ DN IRRG T H++Y I + N + A E++
Sbjct: 67 HTASLLIDDIE--DNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDS 124
Query: 134 ---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
L + L + Q + + DE F + KTG L
Sbjct: 125 PQIDHNVLLKELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNKTGGLFR 184
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
A + + + + L LGI++Q+ DDL + D KK
Sbjct: 185 LAVRIMETLNG-NSKDSKSLVPLANLLGILYQVRDDLQNLT-DQNMIEKK 232
>gi|4725|emb|CAA29064.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 222
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
F++ +A + + ++ R LG FQ+ DD LDC
Sbjct: 60 HSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 117
>gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group]
gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa
Japonica Group]
gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group]
Length = 307
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 61/207 (29%), Gaps = 13/207 (6%)
Query: 42 AIRYALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+ Y +LGGK R V E + L + + + + +
Sbjct: 1 MLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI 60
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + +IA N L +I + + +L L + + +
Sbjct: 61 MDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEI 120
Query: 157 Q--------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
Q + + +++ +++ ++ S +
Sbjct: 121 QTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNYA 180
Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ +G+ FQ DD LDC +
Sbjct: 181 QVKHILVEMGVYFQSQDDYLDCFGEPE 207
>gi|304406152|ref|ZP_07387809.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344736|gb|EFM10573.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 304
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L + + A AA+E + I+DDL DN Q D A
Sbjct: 46 LTALHCRMLGGDEQLADAGAAAVELMILALDIYDDLQDKDNP------KVPWSQIDPAIA 99
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ GL + + ++I + +R+ L N G+ + GQ D+++E + E +
Sbjct: 100 LNVAIGLQSLSMDLILTVPGPSDRKLRAATYL----NQGVLRAVNGQHTDLRNEPMTEEE 155
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + K+G+L+ AC GA +A + E + +G +GI QL +D+
Sbjct: 156 CLQMIEEKSGSLVAAACLVGAALA--TDEHAELIGAYGRAIGIAAQLRNDV 204
>gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group]
Length = 358
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 65/229 (28%), Gaps = 15/229 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNV-----NHLTALR 74
+LL + + Y +LGGK R V E + L
Sbjct: 30 ELLKDPSFDFNDDAIPMAREPLMLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELF 89
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + + + + +IA N L +I
Sbjct: 90 LACILGWGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIF 149
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQ--------GMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ + +L L + + +Q + + +++ +++
Sbjct: 150 RRYFRGKSYYVDLLDLFNEVEIQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAY 209
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ S + +++ +G+ FQ DD LDC +
Sbjct: 210 YSFYLPVACALLLFDESLDNYAQVKHILVEMGVYFQSQDDYLDCFGEPE 258
>gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 111
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 13 SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
R++ LD L ++ L GK+IR L V
Sbjct: 5 QNRVEHALDKSLPAREHIPRS---PPFRRCATQCLAAGKRIRPILTYATGQALGVEINQL 61
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
A+E IH YSL+HDDLP+MD+ +RRG+PT H YDE TAI
Sbjct: 62 DTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAI 106
>gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 483
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 10/163 (6%)
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+ +D+ +RRG P+ + +I++G+ LL A ++ ++ +
Sbjct: 227 MIHVASLLHDDVIDSSSLRRGTPSAPSTFGNKLSILSGDFLLGRASVALARLGSREVVEL 286
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ ++ +L +Q + + +KT +LM + + I+
Sbjct: 287 LATVIANLVEGEMMQ-LRATSEPEKAPTAKGFEDYMRKTYLKTASLMAKSARAAVILGGC 345
Query: 203 ---SQN---EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
S+ K+ +G NLGI FQL DD LD + L K
Sbjct: 346 GSVSEEGAWVKDVAYGYGRNLGIAFQLIDDALDFLPPDSSLGK 388
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
+ L + I++ + + L + M N L + +Y GK +R LV +
Sbjct: 67 TSLDDPLSAINSEIGN-LKSSLWRMLGSSNSALDTVAKYYFQAEGKHLRPLLVLLMSQAT 125
Query: 66 NVNHLTALRVG 76
N
Sbjct: 126 NGLGGKGWDGA 136
>gi|296817039|ref|XP_002848856.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480]
gi|238839309|gb|EEQ28971.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480]
Length = 347
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 66/236 (27%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV--TECASLF 65
+ + + ++ + H + + L + GGK R V T A L
Sbjct: 7 REDFNKVFPAIVEDISEHSKQYNIPASALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + + MD+ RRG+P + + I +
Sbjct: 67 KPLNEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRPGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ ++ +L +T L + +D +
Sbjct: 127 LESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDHVDLDNFSMDKFN 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
sp. SKA34]
gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
sp. SKA34]
Length = 298
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 11/217 (5%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
++ L+ + H L + GG + R+ + A +N TA +
Sbjct: 21 QEINQLMFELCKHSGPVTLSYLR---YHQQSGGSQRRAKICYITAVSLGLNTNTAKLLAV 77
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
+E +H SLIHDD+ D + V +E + I +
Sbjct: 78 TVELLHNASLIHDDVQDKDRQRRGQDALWVKASVEEAICL-------GDTLIIAAYHALS 130
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + + + ++ + G + E +I K L+ + E A
Sbjct: 131 KINTPANSHLQATVCRRVMETIRGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPA 190
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
++A + + L + + +Q DDL D +D
Sbjct: 191 LLAG-EPSLAKALSNAASSFALAYQFYDDLCDQAQDA 226
>gi|85543985|pdb|1YHM|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
Disphosphate Synthase With Alendronate, Isopentenyl
Diphosphate And Mg+2
gi|85543986|pdb|1YHM|B Chain B, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
Disphosphate Synthase With Alendronate, Isopentenyl
Diphosphate And Mg+2
gi|85543987|pdb|1YHM|C Chain C, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
Disphosphate Synthase With Alendronate, Isopentenyl
Diphosphate And Mg+2
Length = 362
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 63/253 (24%), Gaps = 29/253 (11%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-------T 59
+ + L D L + L LGGK R V
Sbjct: 5 ERFLSVYDEVQAFLLDQLQS-KYEIDPNRARYLRIXXDTTCLGGKYFRGXTVVNVAEGFL 63
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
L + H + D RRGKP + T
Sbjct: 64 AVTQHDEATKERILHDACVGGWXIEFLQAHYLVEDDIXDGSVXRRGKPCWYRFPGVTTQC 123
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNI------------------RSQLMLSLTHNIGLQGM 159
+G++ ++ I + + + S + L
Sbjct: 124 AINDGIILKSWTQIXAWHYFADRPFLKDLLCLFQKVDYATAVGQXYDVTSXCDSNKLDPE 183
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFGENLG 218
+ EF +++ T G ++ A+ + + L +G
Sbjct: 184 VAQPXTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVXGLFVSEAAASVEXNLVERVAHLIG 243
Query: 219 IIFQLADDLLDCE 231
FQ+ DD+ DC
Sbjct: 244 EYFQVQDDVXDCF 256
>gi|302506172|ref|XP_003015043.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371]
gi|291178614|gb|EFE34403.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371]
Length = 347
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 66/236 (27%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV--TECASLF 65
+ + + L+ + H + + L + GGK R V T A L
Sbjct: 7 REDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + MD+ RRG+P + + I +
Sbjct: 67 KPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRPGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ ++ +L +T L + + ++ +
Sbjct: 127 LESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDNVDLNNFNMDKFN 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|301166557|emb|CBW26133.1| geranyltranstransferase [Bacteriovorax marinus SJ]
Length = 311
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA---------SLF 65
+ I+ ++ + + + RY +L GK R LV+
Sbjct: 3 VAQIIRNIETHLELVIPKHNFSEVY---RYGVLPPGKAFRPQLVSAIYADYCNESDHKFL 59
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
+ +A+E H Y+L+HDDLPSMD+ RRGKP HI+++E A++AG+GL T
Sbjct: 60 EDPKTPVNYLASAVEVHHAYTLLHDDLPSMDDDDTRRGKPATHIKFNEWKALLAGDGLQT 119
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI-QKMK 184
+F +++ ++ + +G +G++ GQ LD+ +E ++ + K
Sbjct: 120 ASFALLAKYG----HKNLGLILKFFSWALGPKGLIQGQYLDLSEEMTKGIDELILTHQYK 175
Query: 185 TGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDL 227
T L+ + G + A+ + + ++L G ++G++FQL DDL
Sbjct: 176 TARLIQTSILLGYWSSSATTDYRTSKQLFRLGHSVGVVFQLLDDL 220
>gi|297197409|ref|ZP_06914806.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083]
gi|297146716|gb|EFH28304.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083]
Length = 115
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 209 RLRCFGENLGIIFQLADDLLDCEED---LPK 236
L G +LG+ FQ+ DD+L D K
Sbjct: 1 ALDRAGRHLGVAFQIVDDVLGIWGDPLTTGK 31
>gi|89894773|ref|YP_518260.1| hypothetical protein DSY2027 [Desulfitobacterium hafniense Y51]
gi|89334221|dbj|BAE83816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 326
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 15/188 (7%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
L+ +F+ N T ++V A+E + I DD+ DN + A
Sbjct: 55 LLFTIGDVFSDNQETIVQVAVAMELYALAADIFDDIEDQDNDELPWRTIPA------AQA 108
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
I N +L +F+ +++ Q + + ++ I + L + I Q
Sbjct: 109 INTANLILFLSFKALAAINDQALYRQANDIFQTM--GITACHGQNQEFLYEGQDAITLAQ 166
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE----- 231
F + K+GAL C+ A++A + L FG+NLGII Q+ +DL D
Sbjct: 167 YFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRVEAK 226
Query: 232 ED--LPKK 237
D L KK
Sbjct: 227 SDVRLGKK 234
>gi|315049457|ref|XP_003174103.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893]
gi|311342070|gb|EFR01273.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893]
Length = 347
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 60/236 (25%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV----TECAS 63
+ + + L+ + H + + L + GGK R V
Sbjct: 7 REDFNKVFPALVQDISEHSKQYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ MD+ RRG+P + + I +
Sbjct: 67 KPLSEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRQGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ ++ +L T L + + +D +
Sbjct: 127 LESSIYVLLKKHFRSHPAYIDLVELFHETTFQTELGQLCDLITAPEDNVDLDNFSMDKFN 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|325118838|emb|CBZ54390.1| hypothetical protein NCLIV_048200 [Neospora caninum Liverpool]
Length = 553
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 15/58 (25%), Gaps = 4/58 (6%)
Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
+ G + +G FQ+ DD LDC D K
Sbjct: 402 KTSHYSFYLPTALGMTYGGLTDPALMAHAKEICFAIGEYFQVQDDYLDCFSDPKISGK 459
>gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 297
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 10/213 (4%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ I + + + + + + + GG K R+ L + A FN +H TAL +
Sbjct: 17 EAIAEQINQEIVKLCKNAGSKTVEQVKYHQRSGGSKRRALLCYDTARSFNHSHQTALLLA 76
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
++E +H SLIHDD+ D RR + + ++ AI G+ +I++
Sbjct: 77 CSVELLHNASLIHDDIQ--DQDMTRRDQAALWVKSSVAEAICVGDS-------LIAAAYM 127
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
L L ++ + + GQM DI + + K K L+ + E
Sbjct: 128 ALGQLAIFNEKLIPLVSLRVMQTIKGQMSDIGQGQFSRSSYTDVAKEKAAPLLRLSVELP 187
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+++A+ S E+L E I +Q DD+ D
Sbjct: 188 SLLAN-SSIIGEKLAEAAELFAIAYQFNDDISD 219
>gi|46124813|ref|XP_386960.1| FPPS_GIBFU Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Gibberella zeae PH-1]
Length = 347
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 69/226 (30%), Gaps = 13/226 (5%)
Query: 20 LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRV 75
L+++LL A + + D ++ LGGK R V + SL
Sbjct: 17 LEEVLLDHARSYKLPQEQLDWYKKSLEANPLGGKCNRGMSVPDSVSLLLEKPLTEEQYFQ 76
Query: 76 GAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
A + + MD+ RRG+P + Q I +L A +
Sbjct: 77 AATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAINDAFMLEMAIYTLLK 136
Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+T +L T L + + +D + + +
Sbjct: 137 KYFRTHPAYVDLIELFHETTFQTELGQLCDLLTAPEDNVNLDNFSLEKYSFIVIYKTAYY 196
Query: 192 ACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +A A+ + ++ LG FQ+ DD LD
Sbjct: 197 SFYLPVALALHQLNLATPSNLKQAEDILIPLGEYFQIQDDYLDNFG 242
>gi|302421470|ref|XP_003008565.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum
VaMs.102]
gi|261351711|gb|EEY14139.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum
VaMs.102]
Length = 346
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 54/203 (26%), Gaps = 11/203 (5%)
Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMD 96
++ LGGK R V + SL + MD
Sbjct: 39 KSLEINTLGGKCNRGMSVPDSVSLLLEKPLTEEQYFEAATLGWMTELLQAFFLVSDDIMD 98
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ RRGKP + I +L A + + + + L
Sbjct: 99 SSITRRGKPCWYRHEGVGMVAINDAFMLEAAIYTLLKKFFRSHPSYVDLIELFHDVTFET 158
Query: 157 QG------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKER 209
+ + + D F + F++ + A+ N ++
Sbjct: 159 EMGQLCDLLTAPEDKVNLDNFSMDKYSFIVIYKTAYYSFYLPVALALHCLNIATPNNLKQ 218
Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
LG FQ+ DD LD
Sbjct: 219 AEAILIPLGEYFQVQDDYLDNFG 241
>gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 960
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 62/207 (29%), Gaps = 12/207 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S LL Y L GK +RS L+ + V + + I +H
Sbjct: 660 QRSQWTIDQEHILLGPFDYLESLPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTA 719
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ + + ++ + Q + ++
Sbjct: 720 SLLIDDIQDQSLLRRGQPVAHSIFGTAQAMNS-------GNYVYFLALREIQKLQSPKAI 772
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+ + +G E + + KTG L C A + A
Sbjct: 773 TIYVDSLIDLHRGQGMELFWRDSLMCPTEEEYLDMVANKTGGLFCLAIQLM----QAEAT 828
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
K LGIIFQ+ DD L+ +
Sbjct: 829 VKVDFVPLVRLLGIIFQICDDYLNLKS 855
>gi|126348819|ref|XP_001373435.1| PREDICTED: similar to farnesyl pyrophosphate synthetase (EC
2.5.1.1), partial [Monodelphis domestica]
Length = 259
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 4/59 (6%)
Query: 182 KMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
S MA + E + +G FQ+ DD LD D K
Sbjct: 105 YKTAFYSFYLPFASAMYMAGIDGEKEHTNAKNILLEMGEFFQIQDDYLDLFGDPSMTGK 163
>gi|119493680|ref|XP_001263940.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119412101|gb|EAW22043.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 294
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 26/214 (12%)
Query: 24 LLQTASHMQTQHNDR--LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L Q Q + + + + Y GK IR L++
Sbjct: 59 LQQQRKFTQEKAPSHQIISAPLDYLCSFPGKDIRGKLISAF--------------VIKRV 104
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+S D+ +RRG P H + I + N +A + +
Sbjct: 105 VGLLHSASLLIDDIQDSSKLRRGFPVAHSIFGVAQTINSANFAYFFAQQELQKLGKPEAL 164
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
I ++ ML L G+ E + + KTG L A + + +
Sbjct: 165 VIFTEEMLRLHRGQGM-----DLYWRDSLICPTEEEYLEMVANKTGGLFRLAIKLMQMES 219
Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+++ + LGIIFQ+ DD + + DL
Sbjct: 220 QNTKDCVPLVD----LLGIIFQIRDDYQNLQSDL 249
>gi|226468292|emb|CAX69823.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
Length = 176
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENL 217
+ + D+ KT +L+ +C++ A++ SQ + + FG++L
Sbjct: 1 MMQLSTNSDDDDKRFQAYLTKTYRKTASLIANSCKAVAMLTLPTLSQRHIDDMYDFGKHL 60
Query: 218 GIIFQLADDLLDCEEDLPK 236
G+ F L DD+LD D K
Sbjct: 61 GMAFSLIDDVLDFVTDEAK 79
>gi|322695231|gb|EFY87043.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
Length = 325
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 64/200 (32%), Gaps = 11/200 (5%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ L + + Y GK IR L V
Sbjct: 34 EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVSIK-RHPSFATMCLTSFSIDD 92
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ +RRG P H + I + N A + + I ++ +++L
Sbjct: 93 IQDSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRG 152
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
G++ E + + + KTG L A M S ++++ L
Sbjct: 153 QGME-----LHWRDSLHCPTEDEYMRMIQNKTGGLFRLAIRL---MQGESSSKRDYL-PL 203
Query: 214 GENLGIIFQLADDLLDCEED 233
E LG +FQ+ DD + + D
Sbjct: 204 VETLGTLFQIRDDYQNLQSD 223
>gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505]
gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505]
Length = 364
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 59/241 (24%), Gaps = 42/241 (17%)
Query: 34 QHNDRLLSAIRYALLGGKKIRSFL-----VTEC-------------ASLFNVNHLTALRV 75
Q LL A L GGK++R+ L A
Sbjct: 13 QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALELYQAS 72
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT-------YAF 128
+ + + LP+ + R + + + L
Sbjct: 73 ALVHDDLMDGADTRRGLPAAHRVFARDHEDRGWLGRPQTFGANGAILLGDLLLSLAGEEM 132
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-----------LDIQDEFIDETQV 177
++ +T + + + + GQ D +
Sbjct: 133 SALAPSRTSSQTRGSAVRHARSAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARLMQ 192
Query: 178 FMIQKMKTGALMCFACESGAIMA------HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ ++ ++ S E L FGE++GI FQL DD L
Sbjct: 193 GDALSVVRHKSARYSVRHPLLIGALLAGLDPSGATAEHLAAFGEDVGIAFQLRDDELGVF 252
Query: 232 E 232
Sbjct: 253 G 253
>gi|302654819|ref|XP_003019208.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517]
gi|291182916|gb|EFE38563.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517]
Length = 347
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 67/236 (28%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV--TECASLF 65
+ + + L+ + H + + L + GGK R V T A L
Sbjct: 7 REDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + MD+ RRG+P + + I +
Sbjct: 67 KPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRPGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ ++ +L +T L + + ++ +
Sbjct: 127 LESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDNVDLNNFNMDKFN 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ N + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPNNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb03]
Length = 407
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR L+ +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + + ++ + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + + KTG L A + + ++ +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEEYLDMVGNKTGGLFRLAIKLMQAESG-TEIDCVA 258
Query: 210 LRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 259 LANL---MGLIFQICDDYLNL 276
>gi|308161121|gb|EFO63579.1| Farnesyl diphosphate synthase [Giardia lamblia P15]
Length = 407
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 48/275 (17%)
Query: 6 PSKLQENS-KRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYALLGGKKIRSFLV---- 58
+++ + +++D L+ + ++ + D ++ I+Y ++GGK R L
Sbjct: 18 QKCIKDFATEKVDNFLETFIPVYLPNLFSTSLLRDHIVEVIKYNVVGGKMTRGTLAADIF 77
Query: 59 -----TECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
+ L ++ L + + +D+ IRRGKP+
Sbjct: 78 LQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEILQGAFLMIDDVIDHSTIRRGKPSWRA 137
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ A+ G L A ++ + + ++ + G
Sbjct: 138 VVGDEQAVNDGLILWQIADSLVLYLEDKCGKTLKIFEVYHQAKANTTLGQHLDTFTKTYS 197
Query: 170 EFIDETQ-VFMIQKMKTGALMCFACESG----------AIMAHA---------------- 202
+ G AI A
Sbjct: 198 QRHTMGHLNDTYILKTAYYTFYLPLIMGYRSGVLFGNMAIGTSATSEKGYTMQKVDSILN 257
Query: 203 -----SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++++ +LG ++Q+ DD LD
Sbjct: 258 LQQRLDTDIEQQIYKISMDLGRLYQMQDDFLDFYA 292
>gi|320034476|gb|EFW16420.1| geranylgeranyl diphosphate synthase [Coccidioides posadasii str.
Silveira]
Length = 404
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 58/213 (27%), Gaps = 7/213 (3%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ + LL Y + GK IR L+ V + + +
Sbjct: 75 KTVISNIDGMWSVEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVV 134
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQ 137
+H SL+ + + + + I + ++ + Q
Sbjct: 135 LMLHTASLLANSPVLICSVDDVEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQ 194
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
N + + + +G E + KTG L A +
Sbjct: 195 KLRNADAIGIFTTELLNLHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLM- 253
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A +G+IFQ+ DD L+
Sbjct: 254 ---QAESEVSVDCIPLVNLMGLIFQICDDYLNL 283
>gi|119182916|ref|XP_001242557.1| hypothetical protein CIMG_06453 [Coccidioides immitis RS]
gi|303319511|ref|XP_003069755.1| farnesyl pyrophosphate synthetase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109441|gb|EER27610.1| farnesyl pyrophosphate synthetase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040783|gb|EFW22716.1| farnesyl-pyrophosphate synthetase [Coccidioides posadasii str.
Silveira]
Length = 347
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 74/241 (30%), Gaps = 20/241 (8%)
Query: 10 QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIR------SFLV 58
+ + + + L+ H + + ++ GGK R S L
Sbjct: 4 KTSRADFEAVFPSLVQDLTEHAQQYGVPATALEWFQRSLNANTPGGKLNRGLSVPDSALH 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
L + +G E + + L+ DD+ MD RRG+P + + I
Sbjct: 64 LLNQPLTDKQFKDLCTLGWLTELLQAFFLVSDDM--MDTSITRRGEPCWYRREGVGMIAI 121
Query: 119 AGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ +L + ++ ++ +L +TH L + ++
Sbjct: 122 NDSFMLESSIYVLLKKHFRSHPAYVDFIELFHEITHQTELGQLCDLLTAPEDHVDLNNFS 181
Query: 177 VFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + ++ +A A+ ++ LG FQ DD LD
Sbjct: 182 MNKFTFIVIYKTAYYSFYLPVALALHYLQLATPKNLKQAHDILIPLGEYFQAQDDFLDVF 241
Query: 232 E 232
Sbjct: 242 G 242
>gi|148688711|gb|EDL20658.1| mCG16244 [Mus musculus]
Length = 212
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 13/190 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
LL RY L L GK++R+ L V + E +H SL+ DD+ D+
Sbjct: 12 LLDPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+R G P H + I + N + E + + + ++ +L L GL
Sbjct: 70 SKLRHGFPVAHSICGVPSVINSANYVYFLGLEKVLTLDHPDAMKLFTRQLLELHQGQGLD 129
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
T+ + F G + + KE L+ + L
Sbjct: 130 IYWRDTYT-------CPTEEEYKAMVLQKTGGSFGLVVGLM---QFSDFKEDLKPLLDTL 179
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 180 GLFFQIRDDY 189
>gi|327294855|ref|XP_003232123.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892]
gi|326466068|gb|EGD91521.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892]
Length = 347
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 65/236 (27%), Gaps = 16/236 (6%)
Query: 13 SKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV--TECASLF 65
+ + + L+ + H + + L + GGK R V T A L
Sbjct: 7 REDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALLE 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ + + MD+ RRG+P + + I +
Sbjct: 67 KPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMDSSITRRGEPCWYRRPGVGMIAINDAFM 126
Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L + ++ ++ +L +T L + ++ +
Sbjct: 127 LESSIYVLLKKHFRSHTAYVDLVELFHEITFQTELGQLCDLITAPEDKVDLNNFNMDKFN 186
Query: 182 KMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++ +A A+ + LG FQ DD LD
Sbjct: 187 FIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 242
>gi|260785488|ref|XP_002587793.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
gi|229272946|gb|EEN43804.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
Length = 309
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 70/189 (37%), Gaps = 12/189 (6%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
L+ Y + GK+IR L+ + + ++ +H SL+ DD+ DN
Sbjct: 20 LMEPYEYVCQVPGKQIRLQLIEAFNYWLQIPQDKLQTISNVVQMLHNASLLIDDIE--DN 77
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H Y I N + + I ++ +L L G+
Sbjct: 78 SKLRRGIPVAHSIYGTAHTINCANYVYFKGLATVLMLNHPECTRIFTEQLLELHQGQGM- 136
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E + ++ K KTG L A + + + ++++ L L
Sbjct: 137 ----DIYWRDTTTCPREEEYKVMVKKKTGGLFGLAVKLMQLFSD-NKSDFVPLSD---TL 188
Query: 218 GIIFQLADD 226
G+ FQ+ DD
Sbjct: 189 GLYFQIRDD 197
>gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum]
Length = 343
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 12/204 (5%)
Query: 30 HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ + LL Y + GK IR +T S V ++ + + +H SL+
Sbjct: 51 QWSEEKENILLGPYNYLVSHPGKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLL 110
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ D +RRG P H + I + N + A + + L I ++ +L
Sbjct: 111 VDDVE--DRSNLRRGFPVAHSIFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELL 168
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
+L G+ E + KTG L A + + AS +
Sbjct: 169 NLHRGQGM-----DLFWRDTLTTPTEDDYLEMVSNKTGGLFRLAVKLMQAES-ASDKDYV 222
Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
L +G++FQ+ DD L+ +
Sbjct: 223 PLVNI---IGLLFQILDDYLNLQS 243
>gi|226290540|gb|EEH46024.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb18]
Length = 407
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR L+ +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A + + ++ + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALGEVQKLRNPNAIDVYVKELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + + KTG L A + + ++ +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEEYLDMVGNKTGGLFRLAIKLMQAESG-TEIDCVA 258
Query: 210 LRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 259 LANL---MGLIFQICDDYLNL 276
>gi|317028384|ref|XP_001389988.2| farnesyltranstransferase [Aspergillus niger CBS 513.88]
Length = 344
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 66/200 (33%), Gaps = 12/200 (6%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ + Y L GK IR + + + + +H SL+ DD+
Sbjct: 55 DKEKIVRGPLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDI 114
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H + I + N A E + I ++ +L L
Sbjct: 115 Q--DNSKLRRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHR 172
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
G+ E + KTG L A + + K +
Sbjct: 173 GQGM-----DLYWRDSLTCPTEEDYIEMIANKTGGLFRLAIKLMQL----ETETKSYVIE 223
Query: 213 FGENLGIIFQLADDLLDCEE 232
+ LG+IFQ+ DD + +
Sbjct: 224 LADLLGVIFQIRDDYQNLQS 243
>gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora]
Length = 436
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 12/212 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+D + + L Y GK IRS +V + +V + + I
Sbjct: 118 EDFFSPSRRTWSEEKEKVLTGPYDYLNGHPGKDIRSQMVKAFNAWLDVPSESLEVITKVI 177
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ DN +RRG P H + I N + +A + + K
Sbjct: 178 SMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFHALQELQKLKNPKA 235
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+I S+ +L+L G+ E + KTG L +
Sbjct: 236 VSIFSEELLNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLMQAE 290
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ S + L +G+IFQ+ADD +
Sbjct: 291 S-RSPVDCVPLVNI---IGLIFQIADDYHNLW 318
>gi|3122099|sp|Q92235|FPPS_GIBFU RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|1524043|emb|CAA65641.1| farnesyl pyrophosphate synthetase [Gibberella fujikuroi]
Length = 347
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 56/196 (28%), Gaps = 11/196 (5%)
Query: 48 LGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRG 103
LGGK R V + SL A + + MD+ RRG
Sbjct: 47 LGGKCNRGMSVPDSVSLLLEKPLTEEQYFQAATLGWMTELLQAFFLVSDDIMDSSITRRG 106
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
+P + Q I +L A + ++ + T L +
Sbjct: 107 QPCWYRQEGVGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCD 166
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-----ASQNEKERLRCFGEN 216
+ +D + + ++ +A A+ + ++
Sbjct: 167 LLTAPEDNVNLDNFSLEKYSFIVIYKTAYYSFYLPVALALHQLNLATPSNLKQAEDILIP 226
Query: 217 LGIIFQLADDLLDCEE 232
LG FQ+ DD LD
Sbjct: 227 LGEYFQIQDDYLDNFG 242
>gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
DSM 20213]
gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
DSM 20213]
Length = 363
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 28/251 (11%)
Query: 10 QENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALL-------GGKKIRSFLVTEC 61
++ I+ + L+ + + T + +D L + + GGK++R+ L +
Sbjct: 5 ADDLAIIEPRIIQLVRELTAAPDTDEVSDALKPVMAQVVDQAAASSQGGKRLRALLTLDA 64
Query: 62 A---SLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
+ +R +D +RRGKP+ H ++
Sbjct: 65 FDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDIIDESDLRRGKPSAHRALEQAV 124
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+ G+GL +I+++ ++ +L + N M + + E
Sbjct: 125 HSGAIGHGLGLMLGDILATACIEIARRAARRLDNTDAINEAFLTMQREVEIGQVLDLAVE 184
Query: 175 TQVF-------------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
K + + + ++ G LG+ F
Sbjct: 185 LTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAGADPAEAWQQALAVGRPLGLAF 244
Query: 222 QLADDLLDCEE 232
QLADDLLD
Sbjct: 245 QLADDLLDVVG 255
>gi|17481240|dbj|BAB79204.1| farnesyl diphosphate synthase [Rhodobacter sp. AP-10]
Length = 137
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
FA E+GAI+A A + LR + + LG+ FQ+AD
Sbjct: 106 FAAEAGAILAGAD---RAPLRRYAQALGLAFQIAD 137
>gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb01]
gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
brasiliensis Pb01]
Length = 407
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR L+ +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + ++ N+ + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + + KTG L A + + A +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEEYLEMVGNKTGGLFRLAIKL--MQAESDTEI--D 255
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 256 CVALANLMGLIFQICDDYLNL 276
>gi|218437764|ref|YP_002376093.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170492|gb|ACK69225.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 341
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 9/179 (5%)
Query: 58 VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
V + + + AA+ I DDL D +
Sbjct: 45 VVAACKAVGGDPNQTIPLCAALLASAISIRILDDLQDQDKPNALHHVIGSASALNYADTF 104
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ + N L G +L GQ DIQ
Sbjct: 105 KTLAFKIIGDLSL---------KNKADGSPLYQAFIDGYFTLLAGQERDIQGMSRTWEDC 155
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ +MKTG A GA++ Q + + +G +LG+ Q+ +DL + + K
Sbjct: 156 WQTIEMKTGYSYAMATALGAMIGTNHQEWIQICKIYGYHLGLAIQIFNDLEGIWQPVGK 214
>gi|71005942|ref|XP_757637.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
gi|46097068|gb|EAK82301.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
Length = 946
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ +A + ++ +G NLGI FQL DDLLD +
Sbjct: 416 AKLAPSVAEHMRAVRDAAYGYGRNLGIAFQLVDDLLDFQSTSA 458
>gi|206573494|gb|ACI14291.1| farnesyl diphosphate synthase [Linum usitatissimum]
Length = 172
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 21/60 (35%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA E ++ ++G FQ+ DD LDC D
Sbjct: 104 HRRIVQYKTAYYSFYLPVACALLMAGEKLEEHVEVQNVLVDMGTYFQVQDDYLDCFGDPE 163
>gi|1523990|emb|CAA65643.1| farnesyl pyrophosphate synthetase [Claviceps purpurea]
Length = 211
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 54/195 (27%), Gaps = 11/195 (5%)
Query: 49 GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
GGK R V L + A +G E + + L+ DD+ R+
Sbjct: 1 GGKCNRGMSVPDSVSLLLGRPLQEEEYFHAATLGWMTELLQAFFLVSDDIMDGSITRRRK 60
Query: 103 GKPT---VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
A + + + + S + L +
Sbjct: 61 PCWHRQDGVGMIAINDAFLIESAIYALLKKYFRSHPAYVDMLELFHEATFQAELGQLCDL 120
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENL 217
+ G + + + I KT + + A+ + A+ + L
Sbjct: 121 ITGPVDKVDLGNFSMDKYRFIVIYKTAYYSFYLPVALALHQLNLATPRNLKVAEDILIPL 180
Query: 218 GIIFQLADDLLDCEE 232
G FQ+ DD LD
Sbjct: 181 GEYFQVQDDYLDNFG 195
>gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
bacterium EB0_39F01]
gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine
bacterium EB000_55B11]
gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 335
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 8/211 (3%)
Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ ++ +A + GK +R+ + + ASL ++ T+L A+E +H S
Sbjct: 33 ILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWAGAVEVLHNAS 92
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
LIHDD+ D RRG+ ++ +++ TA+ G+ L+ +FE+ S +
Sbjct: 93 LIHDDIC--DGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASEAAEMSNTPRLVGV 150
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + Q + I KT L+ +M+ S
Sbjct: 151 LARHMATTTAGQAMEFGWNSTQSWDV----YLKIAADKTAPLLTAPIHGVTLMSGTSG-L 205
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
+ + +LG +Q+A+D+ + + D K
Sbjct: 206 GFAISGYFCDLGKAYQIANDIQNFKGTDGAK 236
>gi|194382874|dbj|BAG58993.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ E +G+N+GI FQL DD+LD
Sbjct: 18 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 52
>gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca]
Length = 284
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 11/183 (6%)
Query: 45 YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
Y+L+ GK++R+ L V + E +H SL+ DD+ DN +RRG
Sbjct: 3 YSLISGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRRGF 60
Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
P H Y + I + N + E + + + + +L L GL
Sbjct: 61 PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGL-----DIY 115
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
E + + KTG L A + + + KE L+ LG+ FQ+
Sbjct: 116 WRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLNTLGLFFQIR 171
Query: 225 DDL 227
DD
Sbjct: 172 DDY 174
>gi|188039903|gb|ACD47128.1| farnesyl pyrophosphate synthetase [Dendrobium huoshanense]
Length = 174
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%)
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ ++Q +MA + + ++ +G FQ+ DD LDC
Sbjct: 100 YKMPVYNRIVQYKTAYYSFYLPVACALLMAGETLDNYVDVKRVLVEMGTYFQVQDDYLDC 159
Query: 231 EEDLP 235
D
Sbjct: 160 FGDPE 164
>gi|325048848|dbj|BAJ79290.1| geranylgeranyl diphosphate synthase [Reticulitermes speratus]
Length = 323
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ ++++L + + L + GK+IR+ V V + H +++ DD+
Sbjct: 19 EQDEKILEPLTHILQVPGKQIRAKFARAFNYWLKVPENKLNVVKDIAQMFHYNAVLIDDI 78
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H Y + I A N LL + S + ++ L +
Sbjct: 79 R--DNSSLRRGIPVAHSIYGVASTINAANYLLLTGLKKAQSLNHPEAMTVCTEQFLEMYW 136
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
G++ + + K KT + + + ++ + +L
Sbjct: 137 GDGME-----IYWRDNYICPSLEEYKQLIKRKTRGYLMLEIALMQLFSD-NKADLTKLTT 190
Query: 213 FGENLGIIFQLADDLLDCE 231
L + FQ+ DD +
Sbjct: 191 I---LALYFQIRDDYCNLF 206
>gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
proteobacterium HTCC2255]
gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
proteobacterium HTCC2255]
Length = 335
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 27 TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ ++ +A + GK +R+ + + ASL ++ T+L AA+E +H S
Sbjct: 33 ILNRLENVDASLSEAAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWAAAVEVLHNAS 92
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
LIHDD+ D RRG+ ++ +++ TA+ G+ L+ +FE+ S +
Sbjct: 93 LIHDDIC--DGDKQRRGRESIWVKFGRDTALTLGDWLIALSFELASEAAEMSNTPRLVGV 150
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ + Q + I KT L+ +M+ S
Sbjct: 151 LARHMATTTAGQAMEFGWNSTQSWDV----YLKIAADKTAPLLTAPIHGVTLMSGTSG-L 205
Query: 207 KERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
+ + +LG +Q+A+D+ + + D K
Sbjct: 206 GFAISGYFCDLGKAYQIANDIQNFKGTDGAK 236
>gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
Length = 288
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 16/190 (8%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+L Y L + GK+IR+ L ++ +G ++ +H SL+ D+
Sbjct: 10 ILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASLLQDN------ 63
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H + + I + N + E + ++ +L L G++
Sbjct: 64 SSLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQGME 123
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
E+ + K KTG L A + + N + + L
Sbjct: 124 -----IYWRDNYICPTESDYSRMVKRKTGGLFGLAVGLMQLFSENKGNFTKLIGT----L 174
Query: 218 GIIFQLADDL 227
G+ FQ+ DD
Sbjct: 175 GLYFQIRDDY 184
>gi|295660371|ref|XP_002790742.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
Pb01]
gi|226281295|gb|EEH36861.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
Pb01]
Length = 346
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 54/198 (27%), Gaps = 12/198 (6%)
Query: 46 ALLGGKKIRSF------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
GGK R L L + +G E + + L+ DD+ +
Sbjct: 45 NTPGGKLNRGLSVPDTGLALL-GKLSDEQFKHLCTLGWLTELLQAFFLVSDDMMDGSHTR 103
Query: 100 ---IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + + + + + + + T L
Sbjct: 104 RGKPCWHRRPGVNLIAINDSFMLESSIYVILKKHFRFHPAYVDFLELFHEVSFQTELGQL 163
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFG 214
+L ++ + + + I KT + + A+ + A+ +
Sbjct: 164 CDLLTAPEDNVNLDNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPGNLRQAHDIL 223
Query: 215 ENLGIIFQLADDLLDCEE 232
LG FQ DD LD
Sbjct: 224 IPLGQYFQAQDDYLDVFG 241
>gi|253742869|gb|EES99536.1| Farnesyl diphosphate synthase [Giardia intestinalis ATCC 50581]
Length = 407
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 84/277 (30%), Gaps = 52/277 (18%)
Query: 6 PSKLQENS-KRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFL----- 57
+++ + ++ID LD + + + + I+Y +GGK R L
Sbjct: 18 QKCIKDFAIEKIDDFLDTFASLYLPGLSSTGLLREHIAEVIKYNAIGGKMTRGTLAADVF 77
Query: 58 ----------VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
+ E ++ ++ + E + L+ DD+ +D+ +RRGKP+
Sbjct: 78 LQTVRFLFPGLLEDSNFSEELLNLSIDICLIQETLQAAFLMLDDV--IDHSTVRRGKPSW 135
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ A+ G L A + + + ++ + + G
Sbjct: 136 RTVVGDEQAVNDGMMLWQVADSLTFYLEDKCGKTLKIFEVFHQVKANTIFGQHLDTFTKT 195
Query: 168 QDEFIDETQ-VFMIQKMKTGALMCFACESG----------AIMAHA-------------- 202
+ F G AI A A
Sbjct: 196 YSQRYTMRHLNDTYILKTAYYTFYFPLMMGYRAGVLFGNVAIGASAASEGRQTMQKVDSI 255
Query: 203 -------SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++++ +LG ++Q+ DD LD
Sbjct: 256 LNLQQHLDADVEQQIYKISMDLGRLYQMQDDFLDFYA 292
>gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
Length = 345
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 72/218 (33%), Gaps = 16/218 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
L+D+ + + + Y GK+ R+ L++ V+ + +
Sbjct: 36 LEDIDTRGQNRWTEHKEQTIRGPYDYITSKPGKEFRTQLLSAFNVWLKVSPDSLQCISGV 95
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
I +H SL+ DD+ DN +RRG+P H + I + N + A +
Sbjct: 96 IRMLHNASLLVDDIQ--DNSRLRRGRPVAHSVFGVAQTINSANFVYFLALAELQKL---- 149
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + + + +G E + KTG L A +
Sbjct: 150 PHSKEAMEIFTAEMLSLHRGQGMDLFWRDTLSCPSEDDYLEMVSNKTGGLFRLAIKLM-- 207
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL-----LDCE 231
A K LG+IFQ+ DD LD
Sbjct: 208 --QAECETKVDCMPLVNLLGLIFQITDDYRNLASLDYT 243
>gi|323454203|gb|EGB10073.1| hypothetical protein AURANDRAFT_59945 [Aureococcus anophagefferens]
Length = 326
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 60/205 (29%), Gaps = 11/205 (5%)
Query: 30 HMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ ++ LL Y + GK +R L+ + + + +H SL+
Sbjct: 2 AVNHDVDEALLEPFNYISENPGKNVRGSLIDAFNMWLGIPGDRVEAIKRIVSRLHNASLL 61
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ + I+ + DN + +
Sbjct: 62 VDDIEDGSQLRRGKPVAHAIFGVP-------STLNTANYVYFIALEECHRLDNGEALAVF 114
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
+G + E + + KTG L A A + + E
Sbjct: 115 VEELLNLHRGQGQDILWRDSCRCPTEAEYTTMVLDKTGGLFRLAVGMMAAFSDRRKGEFR 174
Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
+L L + FQ+ DDL++ D
Sbjct: 175 KLVDL---LALYFQIRDDLVNLRSD 196
>gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 377
Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 83/259 (32%), Gaps = 32/259 (12%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI--------RYALL-GGKKIRSFLVTE 60
+ K + DD+L + + ++ L +I Y GGK R+ +
Sbjct: 19 NDVIKAFPSFKDDILADINNRLTVSSSNTLRDSIINYFDTCIEYTTKDGGKLNRATSLVA 78
Query: 61 CASLFNVNHLTAL----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
+ + +H ++ +E + + L DD+ + + +
Sbjct: 79 AYDILHHHHHDDDQHDDDRDIALKLAWCVEILQSHFLTLDDVMDSSSTRRGKPCWYTKVG 138
Query: 111 YDEVTA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ I+S K L D I + IG + G M Q
Sbjct: 139 VSNAINDGAFLYSTIYPFIRNIASHKEWLLDVIDIFAHIEQCTLIGQHLDVNGGMQQQQQ 198
Query: 170 EFIDETQVFMIQKMKTGALMCFAC------ESGAIMAHASQNEKERL---RCFGENLGII 220
+ + + I++ T AL A S + A ++ + L + LG+
Sbjct: 199 QDSEHNKEKEIERFNTIALYKTAFYTYYLPASVGVFASDDKDAVKYLPLIKDVCLKLGVY 258
Query: 221 FQLADDLLDCEED---LPK 236
FQ DD LDC L K
Sbjct: 259 FQAQDDFLDCYASPEVLGK 277
>gi|51469024|emb|CAH18006.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
Length = 343
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 75/215 (34%), Gaps = 10/215 (4%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L + + ++Q S Y L L K IR + V +
Sbjct: 76 FLTAMSSELNHRWKSQRLKVADSPYNYILTLPSKGIRGAFIDSLNVWLEVPEDKTSVIKE 135
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
I +H SLI DD DN +RRGKP+ H + AI ++ + K Q
Sbjct: 136 VIGMLHNSSLIIDDFQ--DNSPLRRGKPSTHTVFGPAQAINTATYVIVK-----AIEKIQ 188
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + ++ QG + ++ KTGAL + E A
Sbjct: 189 DIVSHDALADVTGMITSIFQGQAMDLWWTANGIVPSIQEYLLMVNDKTGALFRLSLELLA 248
Query: 198 IMAHAS--QNEKERLRCFGENLGIIFQLADDLLDC 230
+ + AS + E L LG FQ+ DD ++
Sbjct: 249 LNSEASISDSTLESLSSVVSLLGQYFQIRDDYMNL 283
>gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
Length = 263
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 21/218 (9%)
Query: 19 ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
L +++ + + L A+RY + GK +R L+ + + ++ +
Sbjct: 11 ALQHVVVNLQKVGEDLEPESLRKAVRYYIETPGKLLRPILLLTFS--YTLDRRALMDPRL 68
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
L L D V +++E I L I++ +
Sbjct: 69 IQAATIIELLHVVSLLQDD----------VMDKHEERRGIKTPRVLYGDDRTILA---SD 115
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + L + Q L + + ++KT L+ A
Sbjct: 116 WLIAESIRRAVKLGPEVVEYLADVAQRLSRGQALDLDGERERAAELKTAPLIEATLVLPA 175
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I+ + E + G +LG+++Q +DD+ D
Sbjct: 176 IILRR-REILELAKKLGRSLGVLYQYSDDI----SDEG 208
>gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes FSL J1-208]
Length = 98
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 43 IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
+ Y++ GGK+IR LV VN L ++ A+E IH YSLIHDDLP+MDN R
Sbjct: 1 MLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYR 60
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
RGK T H + + TAI+AG+ LLT AF I++
Sbjct: 61 RGKYTNHKVFGDATAILAGDALLTLAFSILA 91
>gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis]
Length = 312
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 10/203 (4%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS----L 64
+ + S + +D + + +H L +A + GGK++R +V A L
Sbjct: 1 MGQVSAPVVEDMDICRQNLLNVVGERHPMLLAAANQIFSAGGKRLRPLIVLLVARATFPL 60
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
++ +T A ++ +D +RRGK TV+ Y A++AG+ L
Sbjct: 61 TGLSDITERHRRLAEISEMLHTASLVHDDVLDECDVRRGKETVNSLYGTRVAVLAGDFLF 120
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ +++ + SQ++ Q + D +ID + K
Sbjct: 121 AQSSWFLANLDNMEVIKLISQVIADFADGEISQ------AASLFDAYIDLRRYLDKSFWK 174
Query: 185 TGALMCFACESGAIMAHASQNEK 207
T +L+ +C S A+ + +
Sbjct: 175 TASLIAASCRSAAVFSDCDTEAR 197
>gi|322699696|gb|EFY91456.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
Length = 429
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 74/213 (34%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + Y GK RS L+ +L V + A+
Sbjct: 123 EDLNFTPRRCWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLRVPPGRLEIITRAV 182
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 183 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSS 240
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + +++L G+ E + KTG L +
Sbjct: 241 ISVFADELVNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 295
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ AS + L +G+IFQ+ DD ++
Sbjct: 296 S-ASDLDCVPLVNL---IGLIFQIRDDYMNLSS 324
>gi|225684972|gb|EEH23256.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
Pb03]
gi|226294284|gb|EEH49704.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
Pb18]
Length = 346
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 67/239 (28%), Gaps = 22/239 (9%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
PS +Q+ S ++ + + +++ GGK R L
Sbjct: 14 FPSLVQDLSDNVNQY----------GIPSNALKWFQTSLNANTPGGKLNRGLSVPDSGLA 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY---IRRGKPTVHIQYDEVT 115
L + +G E + + L+ DD+ + +
Sbjct: 64 LL-GKLSDEQFKHLCTLGWLTELLQAFFLVSDDMMDGSHTRRGEPCWHRRPGVNLIAIND 122
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ + + + + + + T L +L ++ + +
Sbjct: 123 SFMLESSIYVILKKHFRFHPAYVDFLELFHEVSFQTELGQLCDLLTAPEDNVNLDNFNMD 182
Query: 176 QVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ I KT + + A+ + A+ + LG FQ DD LD
Sbjct: 183 KFNFIVIYKTAYYSFYLPVALALHYLQLATPGNLRQAHDILIPLGQYFQAQDDFLDVFG 241
>gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
flavus NRRL3357]
gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
flavus NRRL3357]
Length = 273
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 11/185 (5%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK IRS L+ V + + I+ +H SL+ DD+ D+ +RRG P H
Sbjct: 16 GKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQ--DSSTLRRGVPVAHS 73
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ V I N A +++ L +I ++ +L L G++
Sbjct: 74 IFGVVQIINLANYAYFVAQRELTNLTNPLSLSIYTEELLHLHRGQGME-----LHWRDTL 128
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ E + + KTG L A + + + + LG++FQ+ DD +
Sbjct: 129 QCPSEEEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVET----LGLLFQIRDDYQN 184
Query: 230 CEEDL 234
+ D
Sbjct: 185 LQSDT 189
>gi|34858175|ref|XP_227370.2| PREDICTED: farnesyl pyrophosphate synthetase-like [Rattus
norvegicus]
gi|109467084|ref|XP_001054824.1| PREDICTED: farnesyl pyrophosphate synthetase-like [Rattus
norvegicus]
Length = 160
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
+F I+ + MA + E +G FQ+ DD LD D
Sbjct: 1 MFKIESCTAFYSFYLPIAAAMYMAGFDREKEHANALKILLEMGKFFQIQDDYLDLFGD 58
>gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 201
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
KL + K I L + + MQ+ L Y + GK++R V A L
Sbjct: 3 KLNDIQKPIANELAAFEHKFKASMQSSVP-LLDRITHYIVKRKGKQMRPMFVFFSAGLCG 61
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
+ + R + +E +H SL+HDD+ +DN RRG +V+ + A++ G+ LL+
Sbjct: 62 SINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNALWKNKVAVLVGDFLLSK 119
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
+ I S+ + ++ LQ ++ + + + + KT
Sbjct: 120 GLLLSVDNNDFHLLKIVSEAVEQMSEGELLQIEKARKLDIEESVYF------EVIRQKTA 173
Query: 187 ALMCFACESGAIMAHASQNEKER 209
+L+ C GA ++
Sbjct: 174 SLIASCCACGAASTDVDARNCKK 196
>gi|317506409|ref|ZP_07964214.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
gi|316255289|gb|EFV14554.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
Length = 354
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 16/191 (8%)
Query: 52 KIRSF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
+ R+ L + A V AA + +L+HDDL +D+ R G+ V
Sbjct: 61 RRRAATLTFLASGSPGSAWERARAVAAANTLLMASALVHDDL--VDHDECRYGRAAVWKA 118
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
+ A+ G+ LL AF + ++ + Q M GQ + E
Sbjct: 119 FGAPAAVHLGDALLALAFRTLRDAPAG------ARDEIQDRMAACAQTMYAGQAAETLVE 172
Query: 171 FIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + + K G + + SG + + A + FG + G+ FQ +DL
Sbjct: 173 QNRAGSLEQVIDVAAAKAGNPVEYFVASGVLCSGAPADSVSAAAEFGLSFGMAFQFRNDL 232
Query: 228 LDCE----EDL 234
+ DL
Sbjct: 233 ENIWDNPHGDL 243
>gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
Length = 348
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 10/224 (4%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV 67
E S R+ +LD+ + S + +R L A + GK+ R+ LV C L
Sbjct: 17 DEASARLLALLDESFAEIDSGLPPHLWERALLGPAREFLRRPGKQFRARLVEVCWRLAGG 76
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ + + +E +H SLI DD+ D RRG P +H Y A+ GN + +
Sbjct: 77 DSAMPIELPLVVELLHAGSLIVDDIE--DGSSTRRGGPALHHLYGTSIALNTGNWMYFWP 134
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
+I + +++ + L L ++ +++++V + + T +
Sbjct: 135 LTLI--DRLDQSSERSAEMHRRTRQTLVLCHQGQALDLALKVTELEQSEVPHVVRATTRS 192
Query: 188 LMCFAC----ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
GAI A A + + FG LG+ Q+ DDL
Sbjct: 193 KTSALMSLAAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDL 236
>gi|59709779|gb|AAW88517.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
gi|170674503|gb|ACB30137.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
Length = 465
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 70/213 (32%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + Y GK RS L++ + V + A+
Sbjct: 160 EDLNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAV 219
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 220 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPL 277
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + +++L G+ E + KTG L G +
Sbjct: 278 IGIFADELVNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLF----RLGIKL 328
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +G+IFQ+ DD L+
Sbjct: 329 MQAESAAAVDCVPLVNLIGLIFQIRDDYLNLSS 361
>gi|59709773|gb|AAW88513.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
Length = 466
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 70/213 (32%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL + + Y GK RS L++ + V + A+
Sbjct: 161 EDLNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAV 220
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 221 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPL 278
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + +++L G+ E + KTG L G +
Sbjct: 279 IGIFADELVNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLF----RLGIKL 329
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +G+IFQ+ DD L+
Sbjct: 330 MQAESAAAVDCVPLVNLIGLIFQIRDDYLNLSS 362
>gi|118108024|ref|XP_422855.2| PREDICTED: similar to Chain , Avian Farnesyl Diphosphate Synthase
(Fps) (E.C.2.5.1.10), partial [Gallus gallus]
Length = 71
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
S+ E E + +G FQ+ DD LDC D
Sbjct: 5 SKEEHENAKAILLEMGEYFQIQDDYLDCFGDPA 37
>gi|18478922|gb|AAL73358.1|AF386103_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi]
Length = 316
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 28/210 (13%)
Query: 50 GKKIRSFLV-------TECASLFNVNHLTALRVGAAIECIHCYSLIH--DDLPSMDNGYI 100
GK R V L + + H + MD +
Sbjct: 1 GKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVM 60
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI------------------ 142
RRGKP + T +G++ ++ I +
Sbjct: 61 RRGKPCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVG 120
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + S+ + L + M EF +++ T G ++ A
Sbjct: 121 QMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEA 180
Query: 203 SQNEKERL-RCFGENLGIIFQLADDLLDCE 231
+ + + L +G FQ+ DD++DC
Sbjct: 181 AASVEMNLVERVAHLIGEYFQVQDDVMDCF 210
>gi|303318701|ref|XP_003069350.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109036|gb|EER27205.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 404
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 58/213 (27%), Gaps = 7/213 (3%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ + LL Y + GK IR L+ V + + +
Sbjct: 75 KTVISNIDGMWSVEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVV 134
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQ 137
+H SL+ + + + + I + ++ + Q
Sbjct: 135 LMLHTASLLANSAVLICSVDDVEDSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQ 194
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
N + + + +G E + KTG L A +
Sbjct: 195 KLRNADAIGIFTTELLNLHRGQGMDLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLM- 253
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A +G+IFQ+ DD L+
Sbjct: 254 ---QAESEVSVDCIPLVNLMGLIFQICDDYLNL 283
>gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
Length = 366
Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 72/208 (34%), Gaps = 11/208 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
D + + + + + Y A L GK+IR L+ V+ + + I
Sbjct: 58 DSIDSKLSMEWSPTNERAIREPYDYIAALPGKEIRRKLLDAFNVWLKVDEESCEIIARTI 117
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
H SL+ DD+ DN +RRG PT H Y I A N + A + + K
Sbjct: 118 TMAHNASLMIDDIQ--DNSQLRRGVPTAHRVYGIAQTINAANYVYFQAQQELMRLKNW-- 173
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + + +G + E + KTG L +
Sbjct: 174 --PQALAIFNDELINLHRGQGMELFWRDNFQPPSEGDYLQMIANKTGGLFRLILRL---L 228
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDL 227
AS + + +G+ FQ+ DD
Sbjct: 229 QCASTRVVD-ITPLANVVGLFFQILDDY 255
>gi|110590636|pdb|2HER|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Zoledronate
gi|110590637|pdb|2HER|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Zoledronate
gi|122921291|pdb|2O1O|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Risedronate.
gi|122921292|pdb|2O1O|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Risedronate.
gi|149243603|pdb|2Q58|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Zoledronate
gi|149243604|pdb|2Q58|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
Synthase (Cgd4_2550) In Complex With Zoledronate
Length = 368
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 77/235 (32%), Gaps = 10/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + +L L ++ + L+ I Y + GK IR ++ +S
Sbjct: 27 DFINYYDKFKVIVYNVLKKL--PLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISS 84
Query: 64 LFNVNHLTALRVGAAIECIHCYSL--IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + + I MD+G RRG P +I + + AI
Sbjct: 85 LSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 144
Query: 122 GLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L + +I S + I+ S+ + Q + + + I E
Sbjct: 145 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF 204
Query: 178 FMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDC 230
M++ + G ++ S + + LG +Q+ +D+ D
Sbjct: 205 SMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDVSDY 259
>gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
18224]
gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
18224]
Length = 396
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 12/205 (5%)
Query: 27 TASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
S + ++ Y + GK IR ++ + V + + + + +H
Sbjct: 80 RDSLWTQEKESIIMGPYDYISKQPGKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNA 139
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ DN +RRG P H + I + N + A + + + I ++
Sbjct: 140 SLLIDDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTE 197
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L+L G+ E + + KTG L A + + A ++
Sbjct: 198 ELLNLHKGQGM-----DLFWRDTLTCPTEEEYLEMVDNKTGGLFRLAVKLMQAESEAGKD 252
Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
L LG+IFQ+ DD L+
Sbjct: 253 CV-PLVNI---LGLIFQICDDYLNL 273
>gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName: Full=Albino-3 protein;
AltName: Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
Length = 433
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 12/212 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+D + + L Y GK IRS +V + +V + + I
Sbjct: 116 EDFFSPSRRTWSEEKEKVLTGPYDYLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVI 175
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ DN +RRG P H + I N + YA + + K
Sbjct: 176 SMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPKA 233
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+I S+ +L+L G+ E + KTG L +
Sbjct: 234 VSIFSEELLNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLMQAE 288
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ S + L +G+IFQ+ADD +
Sbjct: 289 S-RSPVDCVPLVNI---IGLIFQIADDYHNLW 316
>gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa]
gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa]
Length = 428
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 12/212 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+D + + L Y GK IRS +V + +V + + I
Sbjct: 111 EDFFSPSRRTWSEEKEKVLTGPYDYLNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKVI 170
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ DN +RRG P H + I N + YA + + K
Sbjct: 171 SMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPKA 228
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+I S+ +L+L G+ E + KTG L +
Sbjct: 229 VSIFSEELLNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLMQAE 283
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ S + L +G+IFQ+ADD +
Sbjct: 284 S-RSPVDCVPLVNI---IGLIFQIADDYHNLW 311
>gi|227495526|ref|ZP_03925842.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
15436]
gi|226831073|gb|EEH63456.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
15436]
Length = 361
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 17/56 (30%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
I + GAI S L G GI FQ+ DD + +
Sbjct: 202 ITVKSGYYSVMRPLVLGAISEGGSAELIAALETAGTAWGIAFQMRDDEIGMFGEES 257
>gi|39974191|ref|XP_368486.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
gi|145018310|gb|EDK02589.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
Length = 412
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 12/210 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
T + Y L GK R+ ++ + V + + + +
Sbjct: 111 FTTTKKTWSEDKEKVVCGPFDYLLGQPGKDFRTQIIMAFNAWLEVPSESLELITHVVGML 170
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DD+ DN +RRG P H + I + N + A + + +I
Sbjct: 171 HTASLLVDDVE--DNSSLRRGLPVAHSIFGVPQTINSANYIYFAALQELKKLSNPEAVSI 228
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ ++ L G+ E + KTG L G + A
Sbjct: 229 FAEELIHLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLF----RLGIKLMQA 279
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+G+IFQ+ DD +
Sbjct: 280 ESAFPTDCIPLANLIGLIFQIRDDYQNLFS 309
>gi|303312145|ref|XP_003066084.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105746|gb|EER23939.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040065|gb|EFW21999.1| geranylgeranyl pyrophosphate synthetase [Coccidioides posadasii
str. Silveira]
Length = 467
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 11/201 (5%)
Query: 40 LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
S Y + L GK+ + +V + + + SL+ DD+ D
Sbjct: 168 ASPYDYTMSLPGKRTIPKFIGALQDWLHVPLTSMKIIENIATDMVNVSLMLDDIQ--DGS 225
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+RRG P H+ Y I + +L A E + K + + + +L G
Sbjct: 226 ELRRGFPAAHVIYGCSQTINSSTYILVKAVERLQRLKNEECRVVFYEESRNLCVGQGF-- 283
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + KTG+ A A +S E L +G
Sbjct: 284 ---DLYWRHHVQCPSVDDYITMVDNKTGSFFRLATRLMVAAAPSSFGSAE-LFQLVSLMG 339
Query: 219 IIFQLADDLLDCEEDL--PKK 237
+Q+ DD + D KK
Sbjct: 340 RYYQIRDDYQNLASDEYAAKK 360
>gi|158979015|gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 84/222 (37%), Gaps = 32/222 (14%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA----------- 62
I+ +D L + + + + + + L
Sbjct: 53 AAIEADIDRYL---KKSITIRPPETVFGPMHH-----------LTFAAPATAASALCLAA 98
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ AAI +H + +H+ LP D KP + +Y ++ G+
Sbjct: 99 CELVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGD 157
Query: 122 GLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQ 176
G++ + FE+++ P + ++++ ++ G +GM+ G + + +
Sbjct: 158 GIVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDF 217
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + K K G + GAI+ A++ E ++LR FG G
Sbjct: 218 IEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 259
>gi|242077482|ref|XP_002448677.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor]
gi|241939860|gb|EES13005.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor]
Length = 329
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 18/56 (32%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
++ + ++ LR +GI FQ DD LDC D
Sbjct: 172 HNVKYKTSYYSFYLPVACALLLCGTKLENISGLRDVLIEMGIYFQAQDDYLDCFAD 227
>gi|67619073|ref|XP_667626.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis TU502]
gi|54658782|gb|EAL37400.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis]
Length = 353
Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 10/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + I +L+ L ++ + L+ I Y + GK IR ++ +S
Sbjct: 12 DFINYYDKFKVIIYNVLEKL--PLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISS 69
Query: 64 LFNVNHLTALRVGAAIECIHCYSL--IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + + I MD+G RRG P +I + + AI
Sbjct: 70 LSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 129
Query: 122 GLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L + +I S + I+ S+ + Q + + + I E
Sbjct: 130 FLKMLSLSLIFELSSVFGDDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKVDKISERYF 189
Query: 178 FMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDC 230
M++ + G ++ S + + LG +Q+ +D+ D
Sbjct: 190 SMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDVSDY 244
>gi|66357330|ref|XP_625843.1| farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II]
gi|46226968|gb|EAK87934.1| putative farnesyl pyrophosphate synthase [Cryptosporidium parvum
Iowa II]
Length = 384
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 77/235 (32%), Gaps = 10/235 (4%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ + + +L L ++ + L+ I Y + GK IR ++ +S
Sbjct: 43 DFINYYDKFKVIVYNVLKKL--PLNDEIRKPVIEYYLNCIDYNVKKGKHIRGKILVLISS 100
Query: 64 LFNVNHLTALRVGAAIECIHCYSL--IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + + + I MD+G RRG P +I + + AI
Sbjct: 101 LSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAINDIF 160
Query: 122 GLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
L + +I S + I+ S+ + Q + + + I E
Sbjct: 161 FLKMLSLSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYF 220
Query: 178 FMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDC 230
M++ + G ++ S + + LG +Q+ +D+ D
Sbjct: 221 SMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDVSDY 275
>gi|308388535|gb|ADO30855.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha710]
Length = 127
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
++ +G +G FQ+ DD+LD +
Sbjct: 1 MKDYGMYVGTAFQIIDDVLDYSGETE 26
>gi|59709781|gb|AAW88518.1| geranylgeranyl diphosphate synthase [Epichloe typhina]
Length = 464
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 70/213 (32%), Gaps = 12/213 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
DDL + + Y GK RS L++ + V + A+
Sbjct: 159 DDLNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAV 218
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 219 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPPI 276
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I + +++L G+ E + KTG L G +
Sbjct: 277 IAIFADELVNLHRGQGM-----DLFWRDTLTCPTEDDYLEMVGNKTGGLF----RLGIKL 327
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A +G+IFQ+ DD ++
Sbjct: 328 MQAESAAAVDCVPLVNLIGLIFQIRDDYMNLSS 360
>gi|119193350|ref|XP_001247281.1| hypothetical protein CIMG_01052 [Coccidioides immitis RS]
Length = 499
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 61/203 (30%), Gaps = 11/203 (5%)
Query: 40 LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC--YSLIHDDLPSMD 96
S Y + L GK+ + +V + + + + D
Sbjct: 196 ASPYDYTMSLPGKRTIPKFIDALQHWLHVPLTSMKIIENIATDMVNISLMQLCRLDDIQD 255
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+RRG P H+ Y I + +L A E + K + + + +L GL
Sbjct: 256 GSELRRGFPAAHVIYGSSQTINSSTYILVKAVERLQRLKNEECCVVFYEESRNLCVGQGL 315
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
+ + KTG+ A A +S E L
Sbjct: 316 -----DLYWRHHVQCPSVDDYITMVDNKTGSFFRLATRLMVAAAPSSFGSAE-LFQLVSL 369
Query: 217 LGIIFQLADDLLDCEEDL--PKK 237
+G +Q+ DD + D KK
Sbjct: 370 MGRYYQIRDDYQNLASDEYAAKK 392
>gi|134057661|emb|CAK38059.1| unnamed protein product [Aspergillus niger]
Length = 346
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 67/202 (33%), Gaps = 14/202 (6%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ + Y L GK IR + + + + +H SL+ DD+
Sbjct: 55 DKEKIVRGPLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDI 114
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H + I + N A E + I ++ +L L
Sbjct: 115 Q--DNSKLRRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHR 172
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR- 211
G+ E + KTG L A + + K ++
Sbjct: 173 GQGM-----DLYWRDSLTCPTEEDYIEMIANKTGGLFRLAIKLMQL----ETETKRQVYV 223
Query: 212 -CFGENLGIIFQLADDLLDCEE 232
+ LG+IFQ+ DD + +
Sbjct: 224 IELADLLGVIFQIRDDYQNLQS 245
>gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 330
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 71/216 (32%), Gaps = 10/216 (4%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+ A + Q + LL A RY + GK +R L+ +C L+ T +
Sbjct: 7 KKVSSDVAPLLPHQSDPSLLEAFRYINSVPGKDVRGKLI-DCFQLWLKVESTEILDSIKD 65
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
++ DN +RRG P H + I N + ++ K
Sbjct: 66 IVGDLHNASLLIDDIEDNSKLRRGNPVAHSIFGIPQVINCSNYVY-----FLALEKVHAL 120
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
++ + + +G E + + + KTG L A G +
Sbjct: 121 NSPTAMQVFVGELLNLHRGQGHDIAWRDSIRCPTEGEYLTMVQDKTGGLFRLAV--GLMQ 178
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A+ + NL + FQ+ DD ++ D
Sbjct: 179 CFATTHRDTDFSNLVNNLAMYFQIRDDFINL-ADEE 213
>gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
corporis]
gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
corporis]
Length = 313
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 34 QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+++LL +Y L + GK +R L + + ++ +H SL+ DD+
Sbjct: 19 DQDEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIPSDKLNVIVEIVQILHNSSLLLDDI 78
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H Y + I A N ++ A E S + ++ +L L
Sbjct: 79 Q--DNSVLRRGIPVAHSIYGIPSTINAANYVIFIALEKTLSLDHPNATQVYTEQLLELHR 136
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
G++ E++ + KTG L A + + + K
Sbjct: 137 GQGME-----IYWRDNFLCPSESEYKQMTMKKTGGLFMLAVRLMQLFS----DNKSDFSK 187
Query: 213 FGENLGIIFQLADDL 227
+G+IFQ+ DD
Sbjct: 188 IAGIIGLIFQIRDDY 202
>gi|255937223|ref|XP_002559638.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584258|emb|CAP92291.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 369
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 12/203 (5%)
Query: 31 MQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
++++ L+ Y GK IR L+ + V + + + +H SL+
Sbjct: 62 WSSKNDKILMGPYDYVHEHPGKDIRRQLIHAFNAWLQVPPASLSIITKVVTMLHTSSLLI 121
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ DN +RRG P H + I + N + A + + +I Q ML+
Sbjct: 122 DDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVQQLNNPAAIDIYVQEMLN 179
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + + KTG L A + + + +
Sbjct: 180 LHRGQGM-----DLFWRDTLTCPTEDEYLEMVGNKTGGLFRLAVKLMQAES-TTGKDCVA 233
Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
L +G+IFQ+ DD L+
Sbjct: 234 LVNV---MGLIFQICDDYLNLSS 253
>gi|148887805|gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha haplocalyx
var. piperascens]
Length = 313
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 84/222 (37%), Gaps = 32/222 (14%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA----------- 62
I+ +D L + + + + + + L
Sbjct: 53 AAIEADIDRYL---KKSITIRPPETVFGPMHH-----------LTFAAPATAASALCLAA 98
Query: 63 -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L + A+ AAI +H + +H+ LP D KP + +Y ++ G+
Sbjct: 99 CELVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGD 157
Query: 122 GLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQ 176
G++ + FE+++ P + ++++ ++ G +GM+ G + + +
Sbjct: 158 GIVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDF 217
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + K K G + GAI+ A++ E ++LR FG G
Sbjct: 218 IEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 259
>gi|323702888|ref|ZP_08114546.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
DSM 574]
gi|323532146|gb|EGB22027.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
DSM 574]
Length = 255
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 77/236 (32%), Gaps = 34/236 (14%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
M+G + +++ + + I+ + L+ A H+ + + IR LV
Sbjct: 1 MSGDNFAVIKKELQSVHDIIRNQLIIKAGHVGQYAHLEFCPTDNF-------IRPALVLT 53
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
A L+N + +GA ++ I S IH +P D G
Sbjct: 54 VARLYNCMSPKVISLGAIVQFIFMASQIHARIPETA---------------DNNRDPRDG 98
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VF 178
+ + + L I + GG + I E +
Sbjct: 99 TQFPVLVGDYLFGKFFTTLCDNGIVHYLRPLAEIIGRLNEGGILSKTNPNAITENESLFE 158
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF----------QLA 224
I K++ LM + +A A + +K L FG +LG+++ Q+
Sbjct: 159 EIVKLEVAELMAGSARLAGDLAGAPEEDKSLLHEFGLSLGMVYGLTQRNFGHQQIQ 214
>gi|78191057|gb|ABB29853.1| geranyl-geranyl pyrophosphate synthase [Nicotiana langsdorffii x
Nicotiana sanderae]
Length = 91
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
+LR F +G++FQ+ DD+LD
Sbjct: 1 KLRKFARCIGLLFQVVDDILDVT 23
>gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
BAL199]
Length = 294
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 88/230 (38%), Gaps = 17/230 (7%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
++L +++ ++D L T L +R + GG ++R+ + + S
Sbjct: 15 NELASLLTKVEALIDTLC--------TGEPGSLAGIVRNHFSAGGSRVRARIALQAGSAL 66
Query: 66 NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
++ + + + E +H SL+HDDL D +RR P++ + + E AI AG+ +L+
Sbjct: 67 GLSQTICVALASGCELLHNASLVHDDLQ--DRDGMRRNAPSMWLAHGEAIAICAGDLMLS 124
Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
A+ ++ + I + G + L + D I K+
Sbjct: 125 SAYAALAQAGPKAASMITHVHLRVAHVISGQC-----EDLRLGGTCNDPEAYEQIAAAKS 179
Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G L+ E I A I +Q+ DDL D + D
Sbjct: 180 GPLLALPLELALIAAGREP-LLGAASRAATLFAIAYQMLDDLGDADRDAA 228
>gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 126
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
N RRGKPT HI Y E A++AG+ LL+++FE I++ + + + + L IG
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIATATKGVSSDRILRAIGELAKCIGS 60
Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+G++ GQ++D+ E D + I KT AL+ + GAIM S E E+LR F
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 215 ENLGII 220
++G++
Sbjct: 121 RSIGLL 126
>gi|296088154|emb|CBI35624.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 212 CFGENLGIIFQLADDLLDCEE---DLPK 236
+ +NLG+ FQL DD+LD L K
Sbjct: 5 EYAKNLGLAFQLIDDVLDFTGTSASLGK 32
>gi|296083873|emb|CBI24261.3| unnamed protein product [Vitis vinifera]
Length = 86
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 212 CFGENLGIIFQLADDLLDCEE---DLPK 236
+ +NLG+ FQL DD+LD L K
Sbjct: 5 EYAKNLGLAFQLIDDVLDFTGTSASLGK 32
>gi|322711435|gb|EFZ03008.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
23]
Length = 327
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 70/200 (35%), Gaps = 12/200 (6%)
Query: 35 HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
+ L + + Y GK IR L V + I+ +H SL+ DD+
Sbjct: 37 EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVTVIKRIIDLLHNASLLIDDIQ 96
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ +RRG P H + I + N A + + I ++ +++L
Sbjct: 97 --DSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRG 154
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
G++ E + + + KTG L A + K
Sbjct: 155 QGME-----LHWRDSLHCPTEQEYMRMIQNKTGGLFRLAIRLM----QGESSSKRDFVPL 205
Query: 214 GENLGIIFQLADDLLDCEED 233
E LG +FQ+ DD + + D
Sbjct: 206 VETLGALFQIRDDYQNLQSD 225
>gi|109017244|ref|XP_001116106.1| PREDICTED: RUN and SH3 domain-containing protein 1 isoform 7
[Macaca mulatta]
Length = 867
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 66/242 (27%), Gaps = 18/242 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H +T RL + Y +GGK R
Sbjct: 67 MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVTDDIMDSSLTRRGQICWYQ 186
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 187 KPGVGLDAINDAILLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQ 246
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 247 GNVDLGRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 306
Query: 223 LA 224
+
Sbjct: 307 IQ 308
>gi|251795064|ref|YP_003009795.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247542690|gb|ACS99708.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 306
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 21/206 (10%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
H + ++ ++R+ L L +F + R AA+E
Sbjct: 23 EPLRGHARAFIREKQAESMRFGL---------LTVLHYRMFGGDSGQIYRAAAAVELFIL 73
Query: 85 YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
S I DDL D + + + + + + +
Sbjct: 74 ASDILDDLQDGDAPHQAWSQVPPAAAMQAAASFMVLSQQAVLEL----------EFDQVL 123
Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
L ++ N L GQMLD+ + DE + + K+ AL+ FAC +G ++A
Sbjct: 124 LLRVARMMNGQLLKAANGQMLDLMNAVTDEDSYLAMVQHKSAALIVFACMTGVMLAGR-- 181
Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
+ + E +G+ Q+ +D+ D
Sbjct: 182 EWHPVVAEYAEEVGMAAQIKNDIKDL 207
>gi|159118517|ref|XP_001709477.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803]
gi|157437594|gb|EDO81803.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803]
Length = 407
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 80/275 (29%), Gaps = 48/275 (17%)
Query: 6 PSKLQENS-KRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLV---- 58
+++ + +++D+ L+ + ++ + D ++ I+Y ++GGK R L
Sbjct: 18 QKCIKDFATEKVDSFLETFIPVYLPNLFSTGLLRDHIVEVIKYNVVGGKMTRGTLAADIF 77
Query: 59 -----TECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
+ L ++ L + + +D+ IRRGKP+
Sbjct: 78 LQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEILQGAFLMIDDVIDHSTIRRGKPSWRA 137
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
+ A+ G L A ++ + + ++ + G
Sbjct: 138 VVGDEQAVNDGLILWQIADSLVLYLEDKCGKTLKIFEVYHQAKANTTLGQHLDTFTKTYS 197
Query: 170 EFIDETQ-VFMIQKMKTGALMCFACESG----------AIMAHA---------------- 202
+ G AI A
Sbjct: 198 QRHTMGHLNDTYILKTAYYTFYLPLIMGYRSGVLFGNMAIGTTAASEKGYTMQKVDSILN 257
Query: 203 -----SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ ++++ +LG ++Q+ DD LD
Sbjct: 258 LQQRLDTDIEQQIHKISMDLGRLYQMQDDFLDFYA 292
>gi|388220|emb|CAA48735.1| unnamed protein product [Escherichia coli]
Length = 131
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 207 KERLRCFGENLGIIFQLADDLLDCEED---LPK 236
L+ +G LG FQL DDLLD D L K
Sbjct: 1 IPDLQDYGRYLGTAFQLIDDLLDYNADGEQLGK 33
>gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
IMCC3088]
gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
IMCC3088]
Length = 361
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 81/218 (37%), Gaps = 17/218 (7%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALR 74
++ L+ T Q L R + GK +R L A + + A
Sbjct: 40 VEEGLERAFKTTVQ----QAPSSLREPCREHFKKRGKHLRGKLAYSAARQYGSSSQAASS 95
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
AA+E +H SL+HDDL D RRG+ T QY E A+ G+ L+ A+E +
Sbjct: 96 WAAAVELLHNASLVHDDLC--DKDSKRRGQQTTFRQYGEAVAVCLGDYLIAKAYEFAARA 153
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + S + + G + ++ I KT L+
Sbjct: 154 GAESLHLLSSSISAL---------VGGQAAEFASAGYPAWSEYEQIAVSKTAPLLGMGVV 204
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A++ S E E L + + + FQ+ +D+ +
Sbjct: 205 GAALINQQSAPEAE-LEHYFYHAALCFQMINDIRNFSG 241
>gi|254411920|ref|ZP_05025696.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
gi|196181642|gb|EDX76630.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
7420]
Length = 318
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 72/221 (32%), Gaps = 18/221 (8%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
+ L+ I + + + + ++ + + L +
Sbjct: 2 NSLKSLYPEIREVFQNSIPNFWTELKVVLAKLFEEPMIPE--------AILPLASCQAVD 53
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
A+ V AA+ + I DDL D + ++ +AI +
Sbjct: 54 GEAKEAIHVCAALLALGLCLRILDDLEDQDRDGQLWKEVGATRAWNYASAIHILSF---- 109
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
++ + ++ ++ + GQ ++ ++ +MK+
Sbjct: 110 ------EILSKASLEPKIFHKINQSYIDAFFRISVGQDRELVGTTRTVEDYWLTVEMKSA 163
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ AC +GA++ + + FG +LG+ Q+ +D+
Sbjct: 164 GFVATACATGAMVGTDNPELIQSCGVFGHHLGLALQILNDM 204
>gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 131
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 LTYAFEIIS 132
+ +FE++
Sbjct: 116 YSRSFEMMV 124
>gi|285808231|gb|ADC35765.1| hypothetical protein [uncultured bacterium 293]
Length = 107
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
++ + +NLG+ FQ+ DDL+D + K
Sbjct: 20 AVKAYAKNLGLAFQIVDDLIDAVGRSGEAGK 50
>gi|222100092|ref|YP_002534660.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
gi|221572482|gb|ACM23294.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
Length = 267
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 12/187 (6%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK +R L V A + + + +D RRGK T++
Sbjct: 8 GKMLRVRLSILSFRNKGVEIDEDAISSLAALELVHLASLL-HDDVIDGARFRRGKETINS 66
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
Y + A+ AG+ +L AF+ + + ++ ++ ++ + +
Sbjct: 67 LYGDRAAVAAGDLVLVSAFQTVEELENDTLRRAFLNVIRKMSEGELIEQL-------KRY 119
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I + + I + K+GAL A + A++ S E L G +G I+Q+ DD++D
Sbjct: 120 TPITKEEYLRIVEGKSGALFGLALQLPALLKGESGEE---LYKLGVTIGTIYQMLDDIMD 176
Query: 230 CEEDLPK 236
++ K
Sbjct: 177 -FAEMEK 182
>gi|83774491|dbj|BAE64614.1| unnamed protein product [Aspergillus oryzae]
Length = 395
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 59/203 (29%), Gaps = 11/203 (5%)
Query: 40 LSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
+ Y + L GK + L + F V + + + SL+ DD+ +
Sbjct: 101 MDPYNYISSLPGKGTVAKLADTLQTWFKVPAGSTEIIKTCSTILFHSSLMLDDIQDDSSK 160
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
RRG P H+ Y + + AF + K L +
Sbjct: 161 --RRGMPAAHVMYGVGQTVNCVSYTGAKAFFLCEELKNANACRKALYDELDNLFSGQALE 218
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGEN 216
+ ++ KT A A S +K L F
Sbjct: 219 LH----WKFHKTCPSMNDYIIMIDNKTAGFFRLVLRMMAAEASVSMSLEKKNTLLHFITL 274
Query: 217 LGIIFQLADDLLDCEEDL--PKK 237
LG +Q+ DD + D KK
Sbjct: 275 LGRYYQIRDDYQNLVSDEYAAKK 297
>gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
Length = 334
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 12/201 (5%)
Query: 35 HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
L + + Y L K IRS L V L + I+ +H SL+ DD+
Sbjct: 36 EEKVLTAPLDYLRALPSKDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDIQ 95
Query: 94 SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
D+ +RRG P H + I + N A + I ++ +++L
Sbjct: 96 --DSSKLRRGVPVAHHIFGIAQTINSANLAYFIAQRELEKLTNPRAFAIYNEELINLHRG 153
Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
G++ E + + + KTG L A + + + +
Sbjct: 154 QGME-----LHWRESLHCPTEDEYLRMIQKKTGGLFRLAIRLLQGESASDDDYVSLIDT- 207
Query: 214 GENLGIIFQLADDLLDCEEDL 234
LG +FQ+ DD + + D+
Sbjct: 208 ---LGTLFQIRDDYQNLQSDI 225
>gi|296410710|ref|XP_002835078.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627853|emb|CAZ79199.1| unnamed protein product [Tuber melanosporum]
Length = 391
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDL 227
+ F + F+++ A A+ + R R LG FQ+ DD
Sbjct: 222 NRFNYDKYYFIVRYKTAFYSFYLPVALAMHQAGIATPDNLTRARDVLIPLGEYFQVQDDY 281
Query: 228 LDCEE 232
LDC
Sbjct: 282 LDCYG 286
>gi|115400049|ref|XP_001215613.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191279|gb|EAU32979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 653
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
++ + KTG A + + A+ L +G +
Sbjct: 478 DLYWKFHKTCPTTSEYLTMVDNKTGGFFRMALRIMELESGATP--CPDLTHLVTLMGRYY 535
Query: 222 QLADDLLDCEEDL 234
Q+ DD L+ D
Sbjct: 536 QIRDDYLNLTSDE 548
>gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276]
gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii
WM276]
Length = 483
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHA---SQN---EKERLRCFGENLGIIFQLADDL 227
+KT +LM + + ++ ++ K+ +G NLGI FQL DD
Sbjct: 317 FEDYMRKTYLKTASLMAKSARAAVVLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDA 376
Query: 228 LDC 230
LD
Sbjct: 377 LDF 379
Score = 37.1 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
+ L + I++ + + L + M N L + +Y GK +R LV +
Sbjct: 66 ATSLDDPLSAINSEIGN-LKSSLWRMLGSSNSTLDTVAKYYFQAEGKHLRPLLVLLMSQA 124
Query: 65 FNVNHLTALRVG 76
N
Sbjct: 125 TNGLGGKGWDGA 136
>gi|254389401|ref|ZP_05004629.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC
27064]
gi|197703116|gb|EDY48928.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC
27064]
Length = 167
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
A++ A L FG LG +Q+ DD D E
Sbjct: 1 MAALVTCAPPALVGALTDFGMALGTAYQITDDTADLEG 38
>gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14]
Length = 293
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 69/202 (34%), Gaps = 12/202 (5%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
M + ++L Y L GK IR LV NV T+ + + +H SL+
Sbjct: 1 MDSDMKHKILEPYEYICELPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLI 60
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ DN +RRG+P H Y I N + +S + Q N +
Sbjct: 61 DDIE--DNSDLRRGRPVAHHIYGIPATINCANYVY-----FLSLQRCQELQNAEAMSTYV 113
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
QG Q + + K KTG L A + +
Sbjct: 114 TEMLRLHQGQGLDIYWRDQCACPSIDEYLEMVKNKTGGLFRLAVGMLQAFSDCRTDFTPL 173
Query: 210 LRCFGENLGIIFQLADDLLDCE 231
L L I FQ+ DD ++
Sbjct: 174 LD----LLSIYFQIRDDYVNLF 191
>gi|258571285|ref|XP_002544446.1| farnesyl pyrophosphate synthetase [Uncinocarpus reesii 1704]
gi|237904716|gb|EEP79117.1| farnesyl pyrophosphate synthetase [Uncinocarpus reesii 1704]
Length = 326
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 61/231 (26%), Gaps = 21/231 (9%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIR------SFLVTEC 61
+ + + + L+ + H Q + ++ GGK R S L
Sbjct: 4 KTSRADFEAVFPSLVQDLSEHAQQYGDPYHSFGVSLNANTPGGKLNRGLSVPDSALSLLS 63
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
L +G E + + L+ DD+ + E +IA N
Sbjct: 64 QPLNEKQFKDLCTLGWLTELLQAFFLVSDDMMDASIT----RRGEPCWYRREGVGMIAIN 119
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
I K + + L L H Q LG +
Sbjct: 120 DSFMLESSIYVLLKKHFRSHPAYVDFLELFHETTHQTELGQLCDLLTAPEDHT------A 173
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ A + A+ ++ LG FQ DD LD
Sbjct: 174 YYSFYLPVALALHYLEL---ATPKNLKQAHDILIPLGEYFQAQDDFLDVFG 221
>gi|148654322|ref|YP_001274527.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
gi|148566432|gb|ABQ88577.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
Length = 330
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 83/217 (38%), Gaps = 17/217 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK-KIRSFLVTECAS 63
LP + + ++ I+ + + +A+R A K ++R+ LV A
Sbjct: 22 LPDDIAGDLAEVEQII-----TVRMNARPIVAQTANAAMRDAD---KLRLRAALVMLAAR 73
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
L + + AA E IH + +HD L ++ RRGKP ++ A+++G+ L
Sbjct: 74 LGRYDTRRVVHAAAAAELIHSATTVHDSL--INEAARRRGKPVGDQHWNGDVALMSGDYL 131
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L A ++ + S+++++ + I Q + +
Sbjct: 132 LALAAAEMALAPDARIIGMYSRVVMAFCEGK------LAPVTVINPLDQALAQHEFVAES 185
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+T AL+ A G + + L FG LG+
Sbjct: 186 RTAALLEAAARVGVVCGSGDDALGDLLGPFGRALGMA 222
>gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40]
gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae]
gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
Length = 389
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
++ +L Y L GK IR L+ V + + + +H S
Sbjct: 74 DGQWSPENEVIVLGPYDYMLQHPGKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTAS 133
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ D +RRG P H Y I + N + A + + +I Q
Sbjct: 134 LLIDDVE--DCSILRRGAPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQE 191
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + + KTG L A + + A+ +
Sbjct: 192 LLNLHRGQGM-----DLFWRDTLTCPSEEEYLEMVGNKTGGLFRLAIKLMQAES-ATGKD 245
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
L LG+IFQ+ DD L+
Sbjct: 246 CVSLVNV---LGLIFQICDDYLNL 266
>gi|146319409|ref|YP_001199121.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145690215|gb|ABP90721.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
Length = 168
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
+ KT L AC+ G+ + S+ + G+ LG+ FQL DDL+D + + K
Sbjct: 15 IQGKTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAESGK 73
>gi|307945554|ref|ZP_07660890.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
gi|307771427|gb|EFO30652.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
Length = 141
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
++A + K R +G LG FQ+ DD LD DL K
Sbjct: 1 MIADQDASMKAAARTYGLELGFAFQMVDDALDYGGTSADLGK 42
>gi|260940298|ref|XP_002614449.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
gi|238852343|gb|EEQ41807.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
Length = 358
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ I ML+L GL + +I + + + KTG L + +
Sbjct: 152 CKTNRILVDEMLNLHQGQGLDIYWRDSLHEIMENLPTIEEYLSMVMNKTGGLFRLSVKLL 211
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A+ + S + E L LGII+Q+ DD L+
Sbjct: 212 ALFS-PSPLQVETLIPLANLLGIIYQIRDDYLNL 244
>gi|256831589|ref|YP_003160316.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
gi|256685120|gb|ACV08013.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
Length = 345
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 71/243 (29%), Gaps = 34/243 (13%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-- 73
DT L L TAS + + +L A G G++IR L E + +
Sbjct: 10 DTDLSASLSTTASAAISDFHTQLSQA-----HGRGRQIRPRLFLEVYAALSHREKHPHLR 64
Query: 74 ------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD--------------- 112
A ++ +D+ +RRG ++ ++
Sbjct: 65 VTERPEIQQVAHAIELLHTSFLIHDDVIDHDTMRRGHTNINGHFELVALSSGASAADAHT 124
Query: 113 --EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
I+ G LT A +++ + R ++ G L
Sbjct: 125 LGNTAGILGGVLALTEALMQVAALDFPHRQRQRLLTAFQEAISLSALGELLDVHSATIPA 184
Query: 171 FIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
T I + A+MA + L G +LG+ +QL DDL
Sbjct: 185 PTPMTDTITIAELKTAEYSFVLPMRLAAMMA--DDANTDALAGVGRHLGVAYQLHDDLNG 242
Query: 230 CEE 232
Sbjct: 243 VFA 245
>gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum]
Length = 127
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG +G++
Sbjct: 5 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGTEGLV 64
Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ+ DI + I KT AL+ + GAI+ + E E+LR F +
Sbjct: 65 AGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRFARCI 124
Query: 218 GII 220
G++
Sbjct: 125 GLL 127
>gi|313616871|gb|EFR89544.1| polyprenyl synthetase [Listeria innocua FSL S4-378]
Length = 127
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 209 RLRCFGENLGIIFQLADDLLDCEE-DLP 235
+ G LG+ FQ+ DD+LD D
Sbjct: 1 KCYNIGHYLGMAFQIIDDVLDYTSTDEG 28
>gi|331236250|ref|XP_003330784.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309309774|gb|EFP86365.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 403
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 74/222 (33%), Gaps = 41/222 (18%)
Query: 16 IDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
I+ + + + + LL Y GK+IRS ++ +V
Sbjct: 109 IEERYSNFFERMKQNNPDWSEPQERILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQ 168
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
V + +H SL+ DD+ D +RRG P H Y I + N + A++ +
Sbjct: 169 LNIVKRIVGLLHTASLLMDDVE--DGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQEL 226
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
S + + L +TG L
Sbjct: 227 SMLHPSQDSSASNLWKLIN---------------------------------ETGGLFRI 253
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A + +MA + + + +GIIFQ+ DDLL+ D
Sbjct: 254 AIKL--MMAMSPLQQIPDYVPLVDLIGIIFQIRDDLLNLSSD 293
>gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides]
Length = 127
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H+ + E A++AG+ LL +AFE+I++ T + + +++ L +IG +G++
Sbjct: 5 RRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGSEGLV 64
Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ++DI E + + + I KT AL+ + GAI+ A+ E E+LR F +
Sbjct: 65 AGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKFARCI 124
Query: 218 G 218
G
Sbjct: 125 G 125
>gi|62510700|sp|Q9P885|GGPPS_RHIRA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|7649674|emb|CAB89115.1| geranylgeranyl pyrophosphate synthase [Mucor circinelloides f.
lusitanicus]
Length = 303
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 12/210 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
L + D +L Y + GK IR+ L++ +V + I +
Sbjct: 2 LNSHNRTEERSTEDIILEPYTYLISQPGKDIRAKLISAFDLWLHVPKDVLCVINKIIGML 61
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DD+ D+ +RRG P H Y I N ++ A + + +
Sbjct: 62 HNASLMIDDVQ--DDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNIPSMMQV 119
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
++ +++L G++ E + + KT L+ A +
Sbjct: 120 CTEELINLHRGQGIE-----LYWRDSLTCPTEEEYIDMVNNKTSGLLRLAVRLMQAASE- 173
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
S + L +GI FQ+ DD ++ +
Sbjct: 174 SDIDYTPLVNI---IGIHFQVRDDYMNLQS 200
>gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica]
Length = 127
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
Q+ I KT AL+ + GAI+ +Q E E+LR F +G++
Sbjct: 82 DQLEFIHIHKTAALLEASVVLGAILGGGTQEEVEKLRRFARCIGLL 127
>gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
bacterium EB0_41B09]
Length = 322
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 81/221 (36%), Gaps = 6/221 (2%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
D LD + + A + + GK +R+ L L ++ T +
Sbjct: 15 DQFLDKVKIDFAKSFEVNDQFLSAWLSHHGESQGKWLRARLALATGGLLGISSQTYINWA 74
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
E IH SL+HDD+ D +RRG+ ++ ++ A+ G+ L+ +F I+
Sbjct: 75 VVCELIHSASLLHDDIC--DQDNLRRGQTSLWKEFGIPAAVCTGDYLIAESFRKITEIDQ 132
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
I +L+ I + + I + Q + KT +
Sbjct: 133 GWHQTILLKLLSYSVKEIIF---GQSKDISISPYEMTWDQYTKMATNKTAPFIALPMMGM 189
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
S+ E E L+ + LG+ +Q +DL + D K
Sbjct: 190 FNCNECSKAECEGLQESSDILGLSYQWLNDLENLIGVDQDK 230
>gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 368
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + ++ KTG I A+A+ N+ LR LG +
Sbjct: 192 DLNWTFNKKCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPND--ELRHLITLLGRYY 249
Query: 222 QLADDLLDCEEDL--PKK 237
Q+ DD + D KK
Sbjct: 250 QIRDDYQNLASDEYTAKK 267
>gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus
gallus]
Length = 420
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 11/178 (6%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK++R+ L NV + E +H SL+ DD+ DN +RRG P H
Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--DNSKLRRGFPVAHS 201
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
Y + I N + E + + + ++ +L L GL
Sbjct: 202 IYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGL-----DIYWRDTY 256
Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
E + + KTG L A + ++ ++ K L LG+ FQ+ DD
Sbjct: 257 TCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----LGLFFQIRDDY 310
>gi|119872063|ref|YP_930070.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
gi|119673471|gb|ABL87727.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
Length = 262
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 17/217 (7%)
Query: 14 KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
+ I T L+ + + ++ L IRY + GK +R L+ + ++++ +
Sbjct: 5 REILTALEQVRELLQNVGKSVEPRSLRDVIRYYIETPGKLLRPILLLTFS--YSLDRKSI 62
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
L L D V ++DE + L I++
Sbjct: 63 FETKIIQAAAIVELLHIVSLLQDD----------VMDKHDERRGVKTPRALYGDGRSIVA 112
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ + L L + Q L I + + + KT L+
Sbjct: 113 ---SDWIIAESIKRALQLGPEVVEYLADVAQRLSIGQALDLDGEYKKAAEFKTAPLIEAT 169
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
I+ + + G LGI++Q +DD D
Sbjct: 170 LVLPIILLGR-RELFDTATKLGRLLGILYQYSDDYSD 205
>gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
Length = 358
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 73/204 (35%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
++ L+ Y L GK IR L+ + V + + + +H S
Sbjct: 44 DGLWSAENERILMGPYDYLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSS 103
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ D+ +RRG P H Y I + N + A + + +I +
Sbjct: 104 LLIDDVE--DSSALRRGIPVAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYVKE 161
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G++ E + + KTG L A + A
Sbjct: 162 LLNLHRGQGME-----LFWRDTLTCPTEDEYLQMVGNKTGGLFRLAVKLM----QAESKT 212
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
+ LG+IFQ+ DD L+
Sbjct: 213 GKDCVSLVNVLGLIFQICDDYLNL 236
>gi|300707872|ref|XP_002996129.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
gi|239605400|gb|EEQ82458.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
Length = 305
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 47/196 (23%), Gaps = 8/196 (4%)
Query: 37 DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
++ I Y + GGK +R N + L
Sbjct: 24 SKIFEMINYNISGGKNVR--FDILSHVTNNSKLCVLEEDKFLVGFCMELFHASFILSDDI 81
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ + + L + + +R +
Sbjct: 82 VDNSLIRRNKPCFHLSRKMKALRDSRFLISLIHKLLKTLKNNSNKLRKIIDKCFYDTCLG 141
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGE 215
Q + + F + + + + G I+ E+L
Sbjct: 142 QAIDTKHKERDEYTFKMYKTICEL--KTSSYSVYMPLACGYILGDRDCPYYLEQLTNL-- 197
Query: 216 NLGIIFQLADDLLDCE 231
+G+I+Q+ DD L+
Sbjct: 198 -IGLIYQMNDDYLNFF 212
>gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum]
Length = 127
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H Y E A++AG+ LL +AFE I++ + + + L +IG +G++
Sbjct: 5 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLV 64
Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ+ DI + I KT AL+ + GAI+ + E E+LR F +
Sbjct: 65 AGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCI 124
Query: 218 GII 220
G++
Sbjct: 125 GLL 127
>gi|46109712|ref|XP_381914.1| hypothetical protein FG01738.1 [Gibberella zeae PH-1]
Length = 757
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 72/224 (32%), Gaps = 23/224 (10%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ +D ++ RY L K +R+ + V A + A E +H
Sbjct: 448 MLQELPPMEDDVVMEPYRYLCSLPSKGVRNKTIDALNFWLKVPIENANTIKAITESLHGS 507
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ D+ +RRGKP+ H + E I + + +IS ++ NI
Sbjct: 508 SLMLDDIE--DHSQLRRGKPSAHAVFGEAQTINSATFQYIQSVSLISQLRSPKALNIFVD 565
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+ L + + + KTG L A A ++
Sbjct: 566 EIRQLFIGQAYE-----LQWTSNMICPPLEEYLRMVDGKTGGLFRLLTRLMA--AESTTE 618
Query: 206 EKERLRCFGENLGIIFQLADDL-----LDCEE--------DLPK 236
+ G FQ+ DD D E D K
Sbjct: 619 VDVDFSRLCQLFGRYFQIRDDYANLKLADYTEQKGFCEDLDEGK 662
>gi|114560079|ref|XP_513857.2| PREDICTED: similar to Ac2-125 isoform 12 [Pan troglodytes]
Length = 867
Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 66/242 (27%), Gaps = 18/242 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 67 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 126
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 186
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 187 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 246
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 247 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 306
Query: 223 LA 224
+
Sbjct: 307 IQ 308
>gi|328793675|ref|XP_624298.3| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
Length = 418
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 57/224 (25%), Gaps = 12/224 (5%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------FNVNHLTALRVG 76
L + + + N + Y + G+K RS + L N A +
Sbjct: 92 LTEEDNEELSDINKWTTEILEYNVPKGEKWRSVSLIVAYKLLASQDQLTKENIRLARILA 151
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
IE +H ++ +D+ + + V + + + + E K
Sbjct: 152 WCIEIMHAVHIVMNDIVDHADMRRNQPTWHVKVGLGAINDALIMETCIQKLLEKHFKLKN 211
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----KMKTGALMCFA 192
+ + + G + + + D + + F
Sbjct: 212 CYVELMNIFWKYNKKTGHGHRLDIFISTNWRKKANFDLFSMDRYNTLVKYKMSCLSFIFP 271
Query: 193 CESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
A +G +Q+ +D L+
Sbjct: 272 FSLAMRFAGVIDSEMHREAEKILLKIGHFYQVQNDFLNYYSKEE 315
>gi|302852307|ref|XP_002957674.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f.
nagariensis]
gi|300256968|gb|EFJ41223.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f.
nagariensis]
Length = 340
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 63/234 (26%), Gaps = 36/234 (15%)
Query: 17 DTILDD--LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------- 67
D +L+D L S + Y + GGK R V + S
Sbjct: 29 DELLNDECLSPANDSAQAKAAQEWFKEVNDYNVPGGKLNRGMAVYDVLSSIKGVEELTEE 88
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+ A +G IE + + L+ DD+ MD RRG+P + LL
Sbjct: 89 DIFKANALGWCIEWLQAFFLVADDI--MDGSITRRGQPCWYKVPKVGMIACNDYILLDCC 146
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD------EFIDETQVFMIQ 181
I + + L + ++ + + ++
Sbjct: 147 IYRILKKHFRSHSAYAQLVDLFHEVTFQTSHGQLLDLTTAPIGSVDLAKYTQDNYLRIVT 206
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
G ++A Q+ DD LDC D
Sbjct: 207 YKTAYYSFYLPVACGMVLAGI-------------------QIQDDYLDCCGDPE 241
>gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
Length = 177
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
++ L LL + + L +A + GK++R +V + +H +
Sbjct: 11 VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69
Query: 75 VGAAIECIHC-YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
E ++ +D +RRG PTVH ++ A++AG+ L + +++
Sbjct: 70 HRRLAEITEMIHTASLVHDDVVDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129
>gi|114560099|ref|XP_001159738.1| PREDICTED: farnesyl diphosphate synthase isoform 1 [Pan
troglodytes]
Length = 332
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 67/243 (27%), Gaps = 18/243 (7%)
Query: 1 MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG S + Q+ + I+ L H + RL + Y +GGK R
Sbjct: 1 MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60
Query: 55 SFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPTVHI 109
V +L+ + MD+ RRG+ +
Sbjct: 61 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQ 120
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI N L + ++ + + Q L + Q
Sbjct: 121 KPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ 180
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
F ++ +++ + MA + E + +G FQ
Sbjct: 181 GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQ 240
Query: 223 LAD 225
+ D
Sbjct: 241 IQD 243
>gi|167630013|ref|YP_001680512.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
Ice1]
gi|167592753|gb|ABZ84501.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
Ice1]
Length = 273
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG----KKIRSFLVTECASLFNVNHLTA 72
++IL + L + + + + +R+ LG K + LV A +F L
Sbjct: 7 ESILPE-LSKVRARLDDRMPLISKQHLRFMGLGSYDVYKLFPAILVLLTARMFGTPSLKT 65
Query: 73 LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+ +A++ I + IH +P K T+ L E++
Sbjct: 66 NCLASAVQFIQTGTDIHRTIPDEGRVLRHLEKATIPFSVLVGDLYYCQFLSLLCEGELLE 125
Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
+ R L + ++ F + + +++M+ +L A
Sbjct: 126 YLTPISRTVCRVHEGGVL------------RKELVEPGFATDEHIRAMREMEFASLPLLA 173
Query: 193 CESGAIMAHASQNEKERLRCFGENLGII 220
C + AS + L G +G++
Sbjct: 174 CRVAGEICGASPRQVVALEQLGRAVGLL 201
>gi|3549881|emb|CAA75568.1| geranylgeranyl diphosphate synthase [Gibberella fujikuroi]
Length = 342
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 73/209 (34%), Gaps = 10/209 (4%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ ++Q S Y L L K IR + V + I +H
Sbjct: 82 SELNHRWKSQRLKVADSPYNYILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLH 141
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SLI DD DN +RRGKP+ H + AI ++ + K Q
Sbjct: 142 NSSLIIDDFQ--DNSPLRRGKPSTHTVFGPAQAINTATYVIVK-----AIEKIQDIVGHD 194
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ ++ T QG + ++ KTGAL + E A+ + AS
Sbjct: 195 ALADVTGTITTIFQGQAMDLWWTANAIVPSIQEYLLMVNDKTGALFRLSLELLALNSEAS 254
Query: 204 --QNEKERLRCFGENLGIIFQLADDLLDC 230
+ E L LG FQ+ DD ++
Sbjct: 255 ISDSALESLSSAVSLLGQYFQIRDDYMNL 283
>gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999]
Length = 292
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 8/210 (3%)
Query: 23 LLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
L+ S + H+DRLLS + + G R+ + + ++ A+ + +E
Sbjct: 17 LVQHNMSTIDESHDDRLLSQMIQYHGTSQGNATRALISLYASDALHLRQQDAVAAASIVE 76
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SLIHDD+ D RRGKP++ Q+ E A+ AG+ L+ A+ + +
Sbjct: 77 TLHTASLIHDDIQ--DREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSHCADISQPTQI 134
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
Q + +I + D I K+G L+ A ++A
Sbjct: 135 QRLIQ---LVHQSITQTISGQTSDITSTDIRTTSQDYETIAINKSGPLLGLALRIPLLLA 191
Query: 201 HASQNEKER-LRCFGENLGIIFQLADDLLD 229
+E + ++ E + +Q+ DDL D
Sbjct: 192 GYDDDETQVWMKQCIEPFALSYQIVDDLFD 221
>gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 364
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ ++ KTG I A+A+ N+ LR LG +
Sbjct: 188 DLNWTFNKTCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPND--ELRHLITLLGRYY 245
Query: 222 QLADDLLDCEEDL 234
Q+ DD + D
Sbjct: 246 QIRDDYQNIASDE 258
>gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14]
gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14]
Length = 298
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
R+ + A +N TA + +E +H SLIHDD+ D RRG+ + ++
Sbjct: 54 RAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQ--DKDQKRRGQDALWVKASV 111
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
AI G+ L+ A+ +S T ++++ + ++ + G +
Sbjct: 112 EEAICLGDTLIVAAYHALSKINTPANSHLQATVCRR-----VMETIRGQMDDLSPQLPLT 166
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
E +I K L+ + E A++A + + L + + +Q DDL D +D
Sbjct: 167 EQSYTLIATNKAAPLLSLSVELPALLAG-EPSLAKALSNAASSFALAYQFYDDLCDQAQD 225
Query: 234 L 234
Sbjct: 226 A 226
>gi|134300043|ref|YP_001113539.1| hypothetical protein Dred_2199 [Desulfotomaculum reducens MI-1]
gi|134052743|gb|ABO50714.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 256
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 11/169 (6%)
Query: 53 IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
IR +V A L+N L +GA ++ I S IH +P
Sbjct: 46 IRPAMVLIVARLYNCRSPRVLSLGAIVQFIFMASCIHKKIPDAAVPNHTVDPRDGTQFPV 105
Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
V + G + L + I + + + L +
Sbjct: 106 LVGDYLYGKFFTNLCNSGLLCYLRPLAEIIGAIHEGGILKINKAAQLKDDNQLMNE---- 161
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
I +++ LM A +A A Q +++ L FG NLG+++
Sbjct: 162 -------IIRLEVAELMAGAASLAGDVAGAPQKDQQLLHEFGLNLGMLY 203
>gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 10/201 (4%)
Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
+ +LL Y + GK +R L+ V L AI + + D
Sbjct: 16 DKQLLEPYLYINGVPGKDVRGKLIDCFQLWLGVESEGVLEEVKAIVADLHNASLLIDDIE 75
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
++ R +A ++ + L + + +
Sbjct: 76 DNSKLRRGQ------PVAHSIFGVASVINTANYVYFMALERCFLLGSEGAMKVFVSEMLN 129
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+G E+Q + KTG L A G + + A++ +
Sbjct: 130 LHRGQGQDIQWRDTTTCPTESQYLAMVTDKTGGLFRLAV--GLLQSFATKMKDVDFVPLV 187
Query: 215 ENLGIIFQLADDLLDCEEDLP 235
NLG+ FQ+ DDL++ D
Sbjct: 188 NNLGLYFQIRDDLINL-ADEE 207
>gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae]
Length = 358
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ ++ KTG I A+A+ N+ LR LG +
Sbjct: 182 DLNWTFNKTCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPND--ELRHLITLLGRYY 239
Query: 222 QLADDLLDCEEDL 234
Q+ DD + D
Sbjct: 240 QIRDDYQNIASDE 252
>gi|78191049|gb|ABB29849.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
sanderae]
Length = 234
Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++Q +MA + ++ ++ +GI Q+ DD LDC D
Sbjct: 110 HRRIVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYSQVQDDYLDCFADPE 169
>gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
Length = 317
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 79/209 (37%), Gaps = 15/209 (7%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
+ +++ ++ + + Q L + +R+ LV A L +
Sbjct: 16 DLAKVEQVIHARM--QGRPIVAQTASAALRGMEKPY-----LRAALVVLAARLGRYDARR 68
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ AA E IH + +HD+L ++ RRG+P +++ A+++G+ LL A +
Sbjct: 69 VIHAAAAAELIHFATAVHDNL--INEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEM 126
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ ++ S+++++ + + Q + + +T AL
Sbjct: 127 ALAPDARIISMYSRVVMTFCEGR------LAPVTAVAPLDQALAQHEYVVESRTAALFET 180
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGII 220
A G + + L FG LG+
Sbjct: 181 AARVGVVCGGSDDTLSNTLGRFGRELGMA 209
>gi|328793673|ref|XP_396224.4| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
Length = 418
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 71/256 (27%), Gaps = 26/256 (10%)
Query: 2 NGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHND---RLLSAIRYALL-GGKKIR 54
+ + + + ++ D+L + + + D + Y + GGK+ R
Sbjct: 64 SNNVQEYVNSFKDERNELMAMWPDILRELSEEYNEELPDVKKWTKELLEYTVPKGGKR-R 122
Query: 55 SFLVTECASL-------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
S + L N A + +IE + + + DD+ N + V
Sbjct: 123 SVPIVIAYKLLASQDQLTEENIRLARILAWSIEIMQAFHTMIDDILDNANMRRNQPTWHV 182
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
+ AI G L T +++I +L + G ++
Sbjct: 183 KVGLG---AINDGLILETCIYKLIKKHFKSKNCYTDIVDILLKYNTKAAHGECLDILIST 239
Query: 168 QDEFIDETQVFMIQKMKT-------GALMCFACESGAIMAHA-SQNEKERLRCFGENLGI 219
+ +F + + A +G
Sbjct: 240 DWAKNENFNLFSMDRYNHLIKYKTSYFSFILPFSLAMRFAGIIDPEMHREAEKILIKIGH 299
Query: 220 IFQLADDLLDCEEDLP 235
+FQ+ +D LD
Sbjct: 300 LFQVQNDFLDYYSKEE 315
>gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii]
Length = 287
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 8/195 (4%)
Query: 41 SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
Y L+ GG +IR + + + +N A+R+ +A+E +H SLIHDD+ D
Sbjct: 31 QPAHYHLMTGGSRIRMRVCLDMSLCLGLNDEDAMRLASAVELLHNASLIHDDIQ--DGDS 88
Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+RRG+ V +++ AI G+ L+ AF I+++ + +L T N +
Sbjct: 89 LRRGQSAVWVKFGTNVAICTGDYLIARAFGILANISSPNV----LPQLLEATQNAVSVTV 144
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
G E I I + K G L+ + E I + NE R +L I
Sbjct: 145 EGQNADLTAKEHISPQNYESIAEKKAGPLLALSLELPLISSGR-LNEIPTARHAASSLAI 203
Query: 220 IFQLADDLLDCEEDL 234
+Q+ DD+ D ED
Sbjct: 204 AYQILDDIKDSVEDA 218
>gi|299115991|emb|CBN75992.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 338
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 12/200 (6%)
Query: 34 QHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ + ++ Y + GK +R L+ ++ + + +H SL+ DD+
Sbjct: 18 EVDQDIMEPFHYINQVPGKDVRGKLIDAFQIWLDIPAERIDAIKEVVGMLHNASLLVDDI 77
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H Y + I N + + +T N R+
Sbjct: 78 E--DNSKLRRGVPVAHSIYGVASTINTANYVYFQ-----ALERTHALGNSRALETFVHEQ 130
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+G + + E + + KTG L A + +N L
Sbjct: 131 LNLHRGQGRDILWRDSNRCPTEEEYESMVLDKTGGLFRLAVGLMQAFSQDQRNYTPLLDQ 190
Query: 213 FGENLGIIFQLADDLLDCEE 232
+ FQ+ DDL++
Sbjct: 191 LA----LYFQIRDDLINLSS 206
>gi|1160178|emb|CAA87327.1| farnesyl pyrophosphate synthetase like-4 [Homo sapiens]
Length = 348
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 53/215 (24%), Gaps = 17/215 (7%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS------LIHDD 91
RL + Y +GGK R L A V+ +
Sbjct: 39 RLKEVLEYNAIGGKYNR-RLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELLQAFFLVA 97
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLS 149
MD+ RRG+ + + I LL + + Q +L L
Sbjct: 98 DDIMDSSLTRRGQICWYQKPGVGLDAIDDANLLEACIYPLLKLYCREQPYYLNLIELFLQ 157
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-----ASQ 204
++ + L + + + + A +
Sbjct: 158 SSYQTEIGQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTALSSSYLPIAAAXXXXGIVXE 217
Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E +G Q+ DD L+ D K
Sbjct: 218 KEHANAXKILLEMGEFSQIQDDYLELFGDPSVTGK 252
>gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
ATCC 18188]
Length = 405
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR +T +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K+ NI + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + + S +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVA 258
Query: 210 LRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 259 LVNL---MGLIFQICDDYLNL 276
>gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
SLH14081]
Length = 405
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR +T +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K+ NI + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + + S +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVA 258
Query: 210 LRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 259 LVNL---MGLIFQICDDYLNL 276
>gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 116
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCGK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
+ A IE +H +L+HDD+ M +RRG+ T + + +++ G+ L
Sbjct: 58 ALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFL 115
Query: 124 L 124
Sbjct: 116 Y 116
>gi|91228844|ref|ZP_01262750.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
gi|91187615|gb|EAS73941.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
Length = 128
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
++ +G+ LG FQL DD++D D
Sbjct: 1 MQNYGKYLGTAFQLIDDVMDYTSD 24
>gi|14625000|dbj|BAB61880.1| farnesyl diphosphate synthase [Rhodobacter azotoformans]
Length = 137
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
Q+ +Q KTGAL+ ++ E+GAI+ A LR + LG+ FQ+AD
Sbjct: 91 QITHLQAGKTGALIRWSAEAGAILGQADTG---PLRRYATALGLAFQVAD 137
>gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata]
Length = 127
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
Q+ I KT AL+ A GAI+ S + E+LR F +G++
Sbjct: 82 DQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEKLRKFARCIGLL 127
>gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
Length = 450
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
+ FG N+GI FQL DD+LD
Sbjct: 320 VCDAAYTFGRNVGIAFQLVDDMLDF 344
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
+ L S ++ + L L A+ + + H A Y GK +R +V
Sbjct: 11 DDALASLTRDPLDVVGQDLSSLRHNIAALLGSGHPSLDKIAKYYFAAEGKHVRPMIVLLM 70
Query: 62 ASLFNVNHLTALRV 75
+ N
Sbjct: 71 SKATNGLSPAWQAH 84
>gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica]
Length = 127
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H Y E A++AG+ LL +AFE I + +++ L IG +G++
Sbjct: 5 RRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGSEGLV 64
Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ++DI E I + + I KT AL+ + GAI+ A+ + +LR F +
Sbjct: 65 AGQVVDICSEGISDVGLEHLEFIHLHKTAALLEGSVVLGAILGGANDVQISKLRKFARCI 124
Query: 218 GII 220
G++
Sbjct: 125 GLL 127
>gi|150865549|ref|XP_001384814.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
6054]
gi|149386805|gb|ABN66785.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
6054]
Length = 347
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 74/232 (31%), Gaps = 24/232 (10%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKK--IRSFLVTECASLFNVNHLTALRVGAA 78
D+L++ + N+ + RY + G +R + L+ L
Sbjct: 9 DVLIRPVNGYDRPENEPISEPYRYLAEIPGNNSNVRGKFLEAFNRLYFHIEQKPLLDAIG 68
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--------- 129
++ D+ RRG P H +Y I GN + A +
Sbjct: 69 DIISIFHNASLLIDDIEDSSEYRRGFPAAHTKYGIPLTINCGNLMYFVALQKAQITLPRL 128
Query: 130 ---------IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
I I ML+L H GL + + Q+ +
Sbjct: 129 YSDLNSDLEIDIDKLKFETSQILIDEMLNLHHGQGLDIYWRDYLPETQESLPSVQDYLSM 188
Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
K KTG L + + A+ S+ E L LGII+Q+ DD L+
Sbjct: 189 VKDKTGGLFRLSIKLLALF---SKRETTDLIPIANLLGIIYQVRDDYLNLTS 237
>gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
Length = 306
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+LL+ +Y L L GK++RS L S V+ + +E +H SL+ DD
Sbjct: 2 ADDVTQLLAPYQYILKLPGKQLRSQLAKAFNSWLQVDVEVLDSIMTVVEMLHNASLMIDD 61
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ D+ +RRG P H Y I N + A I ++ +L L
Sbjct: 62 IE--DSSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLELH 119
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G + + E + + KTG L + + + K +R
Sbjct: 120 RGQGKE-----LYWRDTVQCPTEEEYEQMAMQKTGGLFALTIQLMELFGKKQYDFKSLIR 174
Query: 212 CFGENLGIIFQLADDLLDC 230
+ FQ+ DD ++
Sbjct: 175 NLA----VYFQIRDDYINL 189
>gi|122938158|gb|ABC46412.2| geranylgeranyl diphosphate synthase [Gibberella intermedia]
Length = 392
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 71/209 (33%), Gaps = 11/209 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ ++Q S Y L L K IR + V + I +H
Sbjct: 82 SELNHRWKSQRLKVADSPYNYILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLH 141
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SLI DN +RRGKP+ H + AI ++ + K Q
Sbjct: 142 NSSLI---DDFQDNSPLRRGKPSTHTVFGPAQAINTATYVIVK-----AIEKIQDIVGHD 193
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ ++ T QG + ++ +TGAL + E A+ + AS
Sbjct: 194 ALADVTGTITTIFQGQAMDLWWTANAIVPSIQEYLLMVNDETGALFRLSLELLALNSEAS 253
Query: 204 --QNEKERLRCFGENLGIIFQLADDLLDC 230
+ E L LG FQ+ DD ++
Sbjct: 254 ISDSALESLSSAVSLLGQYFQIRDDYMNL 282
>gi|294995849|ref|ZP_06801540.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
210]
Length = 126
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
+ FG LG+ FQ DDL+ D
Sbjct: 1 MERFGHELGLAFQCVDDLIGIWGDPG 26
>gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi]
gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi]
Length = 306
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 12/194 (6%)
Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
+LL+ +Y L L GK++RS L V+ + +E +H SL+ DD+ D
Sbjct: 7 QLLAPYQYILKLPGKQLRSQLAKAFNFWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ +RRG P H Y I N + A I ++ +L L G
Sbjct: 65 SSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLELHRGQGK 124
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
+ + E + + KTG L + + + K ++
Sbjct: 125 E-----LYWRDIVQCPTEEEYEQMAMQKTGGLFALTVQLMELFGKKQYDFKSLIKNLA-- 177
Query: 217 LGIIFQLADDLLDC 230
I FQ+ DD ++
Sbjct: 178 --IYFQIRDDYINL 189
>gi|296229113|ref|XP_002760035.1| PREDICTED: RUN and SH3 domain-containing protein 1-like [Callithrix
jacchus]
Length = 870
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 64/245 (26%), Gaps = 21/245 (8%)
Query: 1 MNGGLPS--------KLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGK 51
MNG S + Q+ + I+ L H +T RL + Y +GGK
Sbjct: 67 MNGDQKSDKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGK 126
Query: 52 KIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHD--DLPSMDNGYIRRGKPT 106
R V + MD+ RRG+
Sbjct: 127 YHRGLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDIMDSSLTRRGQIC 186
Query: 107 VHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGML 160
+ + AI L + ++ + + Q L +
Sbjct: 187 WYQKPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLIT 246
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGI 219
Q D F ++ +++ + MA + E + +G
Sbjct: 247 APQDNVDLDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGE 306
Query: 220 IFQLA 224
FQ+
Sbjct: 307 FFQIQ 311
>gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
Length = 172
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 16 IDTILD------DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
I+ +LD + + Q + D + R+ + GGK++R L CA +F
Sbjct: 17 IEPLLDLVSGGMEEVNQLILSKAGSNVDLIPEIARHLISSGGKRLRPMLTLACADMFGYR 76
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + A++E +H +L+HDD+ +D +RRGK + +++ G+ LL AF
Sbjct: 77 GDGHVVLAASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNQASVLVGDYLLGQAF 134
Query: 129 EIIS 132
+++
Sbjct: 135 KMMV 138
>gi|238492197|ref|XP_002377335.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220695829|gb|EED52171.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 444
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 4/78 (5%)
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIF 221
++ KT A A S +K L F LG +
Sbjct: 269 HWKFHRTCPSMNDYIIMIDNKTAGFFRLVLRMMAAEASVSMSLEKKNTLLHFITLLGRYY 328
Query: 222 QLADDLLDCEEDL--PKK 237
Q+ DD + D KK
Sbjct: 329 QIRDDYQNLVSDEYAAKK 346
>gi|310789778|gb|EFQ25311.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 742
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 57/215 (26%), Gaps = 7/215 (3%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
++ L ++ +L+ +Y + K IR + V + +
Sbjct: 428 EETLAVKYPEDVKCRSELVLAPYKYLTSMPSKGIRELFIRALNWWLKVPDDKLACIQDVV 487
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ + + + + ++
Sbjct: 488 SYLHQSSLMLDDIEDGSKLRRGQPSTHAVYGIGQTINS-----ANFVFVQAFARMQSLGH 542
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + +G Q + FM+ KTG L
Sbjct: 543 GRAEAIDIFIDEVENLHKGQSYDLFWKDQVHCPSVDEYFMMIDNKTGGLFRLCVRLMEFF 602
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
A S F + L FQ+ DD + D
Sbjct: 603 ATGSTRGISS-EFFVKRLSRYFQIRDDYQNLMSDQ 636
>gi|317137331|ref|XP_001727659.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 371
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 64/203 (31%), Gaps = 9/203 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ +L+ Y L K +R + V T + + +H SL+ DD
Sbjct: 70 KPEKNIVLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDD 129
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
L D +RRGKP H+ Y I + L F + + I + +L
Sbjct: 130 LE--DESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETTEIFIDELQNLH 187
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ M+ KTG L + +S E L
Sbjct: 188 CGQ-----SFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE-LT 241
Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
F LG FQ+ DD + +
Sbjct: 242 HFVSLLGRFFQIRDDYQNLMSEE 264
>gi|149922055|ref|ZP_01910496.1| hypothetical protein PPSIR1_24309 [Plesiocystis pacifica SIR-1]
gi|149817107|gb|EDM76588.1| hypothetical protein PPSIR1_24309 [Plesiocystis pacifica SIR-1]
Length = 324
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
DE + I MKT L A GA A++ + + G LG + Q+ DDL D
Sbjct: 142 CADEEAYWRIVDMKTPPLFGCALALGARCGGATRELADAIAELGLPLGRLIQIGDDLGDA 201
>gi|83770687|dbj|BAE60820.1| unnamed protein product [Aspergillus oryzae]
Length = 362
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 64/203 (31%), Gaps = 9/203 (4%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ +L+ Y L K +R + V T + + +H SL+ DD
Sbjct: 61 KPEKNIVLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDD 120
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
L D +RRGKP H+ Y I + L F + + I + +L
Sbjct: 121 LE--DESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETTEIFIDELQNLH 178
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
+ M+ KTG L + +S E L
Sbjct: 179 CGQ-----SFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE-LT 232
Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
F LG FQ+ DD + +
Sbjct: 233 HFVSLLGRFFQIRDDYQNLMSEE 255
>gi|2644975|emb|CAA05825.1| IspA protein; partial [Wolinella succinogenes]
Length = 163
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE-CASLFNV 67
L+ + + L++ +N+ L +R GGK+ R L+ ++L +
Sbjct: 3 LESVMEGFERFLEE-EAPLFEGFHPHYNEYLWEMVR---NGGKRFRPRLLLGVVSALAPL 58
Query: 68 NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
+A A+E +H YSLIHDDLP+MDN RRG PT+H++YDE +A++AG+ L T+A
Sbjct: 59 LVKSAYAPALALEILHTYSLIHDDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHA 118
Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
F +++ + L+ G + + +
Sbjct: 119 FYLLAQAPLGSDTKVALVRELASAGGAGGMVLGQALDCYFEHQ 161
>gi|256692943|gb|ACV13206.1| geranyldiphosphate synthase [Ips confusus]
Length = 420
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 18/248 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHND----RLLSAIRYALLGGKKIRSFLVTEC 61
++++ K +D I +++ Q Q + RL AI Y + GK+ + +
Sbjct: 66 NEEMKDAMKYMDEIYSEVMGQIEKVPQYEEVKPILVRLRDAIDYTVPYGKRFKGVHIVSH 125
Query: 62 ASLFNVNHLTALRV-------GAAIECIHCYSLIHDDLPSMD------NGYIRRGKPTVH 108
L G E I Y + DD+ + + ++
Sbjct: 126 FKLLADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDIMDDSDTRRGKPTWYKLPGIGLN 185
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
D + LL F S + + + +
Sbjct: 186 AVTDVCLMEMFTFELLKRYFFQHPSCADIHEIFRNLLFLTHMGQGCDFTFIDPVTRKINF 245
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDL 227
EF +E + + + E + MA+ + + L +G++ Q +D
Sbjct: 246 KEFTEENYTKLCRYKIIFSTFHNTLELTSAMANVYDPKKIQELDPVLMRIGMMHQSQNDF 305
Query: 228 LDCEEDLP 235
D D
Sbjct: 306 KDLYRDQG 313
>gi|325095662|gb|EGC48972.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H88]
Length = 375
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 70/201 (34%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK +R + +V + + + +H SL+
Sbjct: 59 WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 118
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K NI + +L+
Sbjct: 119 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLN 176
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + A +
Sbjct: 177 LHRGQGM-----DVFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLM----QAESDTGID 227
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 228 CVTLVNLMGLIFQICDDYLNL 248
>gi|225557933|gb|EEH06218.1| geranylgeranyl pyrophosphate synthase [Ajellomyces capsulatus
G186AR]
Length = 403
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 70/201 (34%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK +R + +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K NI + +L+
Sbjct: 147 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + A +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLM----QAESDTGID 255
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 256 CVTLVNLMGLIFQICDDYLNL 276
>gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli]
Length = 375
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 84/232 (36%), Gaps = 19/232 (8%)
Query: 2 NGGLPSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLV 58
GL ++L+ + +D +++ L+ Y GK +R+ L+
Sbjct: 42 TNGLSARLKHKRNKSSVDGT-----KYKDGTWSSKNEKILMGPYDYMHQHPGKDVRTQLI 96
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
S V + + + +H SL+ DD+ DN +RRG P H + I
Sbjct: 97 QAFNSWLQVPPESLAIISKVVTMLHTASLLIDDVE--DNSVLRRGVPVAHNIFGTAQTIN 154
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+ N + A + I K +I + +L+L G+ E +
Sbjct: 155 SANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRGQGM-----DLFWRDTLTCPTEDEYL 209
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ KTG L A + A + + +G+IFQ+ DD L+
Sbjct: 210 EMVGNKTGGLFRLAVKLM----QAESSTGKDCVSLVNVMGLIFQICDDYLNL 257
>gi|325290814|ref|YP_004266995.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324966215|gb|ADY56994.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 313
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
Q F + + K+G+L AC+ G +M A ++ +L FG N GI+ Q+++DL D +L
Sbjct: 159 DQYFELIRQKSGSLTAAACKIGGVMGRAPESIVLKLEEFGANYGIMNQISNDLNDFT-NL 217
Query: 235 PKK 237
KK
Sbjct: 218 SKK 220
>gi|301752372|gb|ADK89163.1| ComQ [Bacillus licheniformis 9945A]
Length = 303
Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+ + E + + K K+GAL C GA++A + + + LGI
Sbjct: 123 MQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGAMLA--TGKFDPAVEKYAYQLGI 180
Query: 220 IFQLADDLL----DCEEDLPKK 237
Q+ +D D + D+ KK
Sbjct: 181 ASQIENDYKALFYDSKSDIAKK 202
>gi|159125895|gb|EDP51011.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus
fumigatus A1163]
Length = 452
Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 72/214 (33%), Gaps = 11/214 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
R++ ++A+ N LL + Y L K +R+ LV F + H
Sbjct: 189 RVEDA-----NESAASPVALGNSALLDPVHYIQSLPSKNMRTKLVDALNLWFQLPHHLVD 243
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
V ++ +H +LI DD+ D+ Y+RRG H + I + LL A +S
Sbjct: 244 TVKGTVDDLHNSTLILDDIQ--DSSYLRRGFAATHHVFGSAQCINSATYLLVQAASRLSV 301
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
Q I L ++G + + KTG +
Sbjct: 302 HNEQYPAVITVFLDGLKELSLGQSW---DLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIV 358
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + L + LG +Q+ DD
Sbjct: 359 RMMHCFSSSQTVPVSELSQLTQLLGRWYQVRDDY 392
>gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
NAm1]
gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
NAm1]
Length = 375
Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 71/201 (35%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK +R + +V + + + +H SL+
Sbjct: 59 WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 118
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K+ NI + +L+
Sbjct: 119 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLN 176
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + A +
Sbjct: 177 LHRGQGM-----DVFWRDTLTCPTEDDYLEMVGNKTGGLFRLAIKLM----QAESDTGID 227
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 228 CVTLVNLMGLIFQICDDYLNL 248
>gi|302548937|ref|ZP_07301279.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
gi|302466555|gb|EFL29648.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
40736]
Length = 381
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
Q + L G G+ FQL DDL D D K
Sbjct: 219 QEATQALCRAGRCAGLAFQLRDDLDDLFADPDVTGK 254
>gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica]
Length = 392
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 73/220 (33%), Gaps = 16/220 (7%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+ + H + Y A GK+IRS ++ + V + A+
Sbjct: 87 QERIEVDFDHWTEAKEKVVTGPYDYIAASPGKEIRSLMLACFNAWLEVPAQRLEVIKRAV 146
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ DN +RRG+P H + I + N + ++ +
Sbjct: 147 GMLHTASLLIDDIQ--DNSELRRGRPVAHKIFGPAMTINSANHMY-----FLALQELNAL 199
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ + + +G E F + KTG L A
Sbjct: 200 ETPGVVDIFTDELLRLHRGQAMDLYWRETLTCPTEADYFEMTSNKTGGLFRLAYRLM--- 256
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC----EEDLP 235
A L E LG++FQ+ADD + DL
Sbjct: 257 -KAESAVSVDLMPVVELLGVLFQVADDYKNLCSREYGDLK 295
>gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum reducens MI-1]
gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein
[Desulfotomaculum reducens MI-1]
Length = 162
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 10/122 (8%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
+ + ++ L L N L SA + GGK+IR LV +
Sbjct: 23 IAKEMAEVEKSLVALFPS---------NHLLGSAHNLIIAGGKRIRPALVLLAGK-QGLV 72
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ +++ A+E +H +L HDD+ + + + ++T
Sbjct: 73 NKQVMQLAIAVEILHLATLTHDDIIDNAATRRGKPAAHFNRAFLWSLPFGLLCTVITSQI 132
Query: 129 EI 130
+
Sbjct: 133 HL 134
>gi|70985354|ref|XP_748183.1| geranylgeranyl pyrophosphate synthase [Aspergillus fumigatus Af293]
gi|66845811|gb|EAL86145.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus
fumigatus Af293]
Length = 452
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 70/214 (32%), Gaps = 11/214 (5%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
R++ + A+ N LL + Y L K +R+ LV F + H
Sbjct: 189 RVEDA-----NERAASPVALGNSALLDPVHYIQSLPSKNMRTKLVDALNLWFQLPHHLVD 243
Query: 74 RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
V ++ +H +LI DD+ D+ Y+RRG H + I + LL A +S
Sbjct: 244 TVKGTVDDLHNSTLILDDIQ--DSSYLRRGFAATHHVFGSAQCINSATYLLVQAASRLSV 301
Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
Q I L +G + + KTG +
Sbjct: 302 HNEQYPAVITVFLDGLKELALGQSW---DLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIV 358
Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + L + LG +Q+ DD
Sbjct: 359 RMMHCFSSSQTVPVSELSQLTQLLGRWYQVRDDY 392
>gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica]
gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica]
Length = 327
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 11/212 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ LL Y G IR L+ ++ V+ + + +H
Sbjct: 6 ADFKEIWGKAADTALLGPYNYLANNRGHNIREHLIAAFGAVIKVDKSDLETISHITKILH 65
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ DN +RRG P H + I + N + A + + K+ +I
Sbjct: 66 NSSLLVDDVE--DNSMLRRGLPAAHCLFGVPQTINSANYMYFVALQEVLKLKSYDAVSIF 123
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
++ M++L G+ E + + KTG L A +A
Sbjct: 124 TEEMINLHRGQGM-----DLYWRETLTCPSEDEYLEMVVHKTGGLFRLALRLMLSVASKQ 178
Query: 204 QNEKE---RLRCFGENLGIIFQLADDLLDCEE 232
++ ++ L + LG+I+Q+ DD L+ +
Sbjct: 179 EDHEKINFDLTHLTDTLGVIYQILDDYLNLQS 210
>gi|301103047|ref|XP_002900610.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
T30-4]
gi|262101873|gb|EEY59925.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
T30-4]
Length = 296
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 71/200 (35%), Gaps = 15/200 (7%)
Query: 34 QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
++ +LL Y + L GK +R ++ S + + ++ +H SL+ DD+
Sbjct: 7 ENESKLLEPYAYISELPGKNVRGRMIGAFQSWLRAPTEAVESIQSIVDQLHNASLLIDDI 66
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
+RRG+P H + I N + +S K Q N R+ + +
Sbjct: 67 EDDSE--MRRGQPVAHHIFGVPATINCANYVY-----FLSLQKCQALGNPRALQVYTDEM 119
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
QG + + + + KTG L A + ++ +
Sbjct: 120 LRLHQGQGLDIFWRDHLQCPTVDEYLEMVQNKTGGLFRLAVGLMQAFSDSTMD----FTP 175
Query: 213 FGENLGIIFQLADDL---LD 229
L + FQ+ DD LD
Sbjct: 176 LVNALAVYFQIRDDYVNLLD 195
>gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
Length = 286
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 70/189 (37%), Gaps = 12/189 (6%)
Query: 40 LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
L +Y + + GK+IR L+ + + + + ++ +H SL+ DD+ DN
Sbjct: 1 LEPYQYIVQIPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIE--DNS 58
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+RRG P H + I A N + A I S I ++ ML L GL
Sbjct: 59 KLRRGVPVAHQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDI 118
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ E + M+ KTG L A + + K L
Sbjct: 119 LWRDSHN-----CPSEEEYKMMVNKKTGGLFRLAVNLMQLFS----ENKRNFTPLLNYLS 169
Query: 219 IIFQLADDL 227
+ FQ+ DD
Sbjct: 170 LFFQIGDDY 178
>gi|317506406|ref|ZP_07964211.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
BAA-974]
gi|316255286|gb|EFV14551.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
BAA-974]
Length = 130
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
+ FG +LGI FQ DD+L +
Sbjct: 1 MSAFGRHLGIAFQYVDDVLGIWGESA 26
>gi|297528712|ref|YP_003669987.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|297251964|gb|ADI25410.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
Length = 279
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ D+ + E + + K G+L+ AC GA++A + + + + +GI
Sbjct: 116 HGQQTDVACDVQTEADYLKMVEKKAGSLVAMACVIGALLAG--KEDIAAIETYARYIGIA 173
Query: 221 FQLADDL 227
Q+ +DL
Sbjct: 174 AQIDNDL 180
>gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
Length = 728
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 60/206 (29%), Gaps = 9/206 (4%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ + RY + K +RS L+ V + + I+C+H S
Sbjct: 410 EGSLPGMQAAPVFEPARYIRQMPSKNMRSQLMDCFNLWLEVPQPSLAAIKETIDCLHHSS 469
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
LI DD+ + + + + A + + + L
Sbjct: 470 LILDDIEDGSDLRRGLPAAHIVYGVGQAINSATHLHVQAVANMHAMASREGRPQMMDVFL 529
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-- 204
IG E + + KTGA++ E A A++
Sbjct: 530 HHLNQLFIGQSW---DLHWTFHRRCPTEEKYLNMIDQKTGAMLQMLLELMQTAAAAAKQG 586
Query: 205 ---NEKERLRCFGENLGIIFQLADDL 227
+ K L F G FQ+ DD
Sbjct: 587 VLKDGKHLLWEFTRLFGRFFQVRDDY 612
>gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
ER-3]
Length = 405
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK IR +T +V + + + +H SL+
Sbjct: 87 WSLEKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + I + N + A E + K+ NI + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLN 204
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + + S +
Sbjct: 205 LHRGQGM-----DVFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVA 258
Query: 210 LRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 259 LVNL---MGLIFQICDDYLNL 276
>gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
SW2]
gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
SW2]
Length = 419
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 50/198 (25%), Gaps = 9/198 (4%)
Query: 2 NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTE 60
+ L + R+ + L+ Q L S +R Y GK +R LV
Sbjct: 208 DNDLMETMARCKARVVDEILRLIP------NKQPQRDLYSLMRDYVQREGKGLRPTLVIA 261
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+R AA+E H L+HDD+ + G
Sbjct: 262 TCMALGGRFEDGVRAAAALEMFHNGFLVHDDIADESTHRRGLPTLHMSHGIGLAVNAGDG 321
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
L + + L + + ++G ++ +
Sbjct: 322 MHLFAVDMTLSNLQSVGLARTLGIIHEILHMCRETVEGQAIELGWIRRNFVPARDADYSR 381
Query: 181 Q--KMKTGALMCFACESG 196
K C G
Sbjct: 382 MSTKKTGWYTCISPCRVG 399
>gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ ++ R + L +L+ ++ H D + GGK+IR LV +
Sbjct: 251 DTFTNGVKAPLLRFEEALSELVQSDVLFVRLIHQDLV-------TAGGKRIRPRLVFLAS 303
Query: 63 SLFNVNHLTA 72
Sbjct: 304 RALGGAPFEM 313
>gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum]
Length = 127
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
Q+ I KT AL+ A GAI+ S + E+LR F +G++
Sbjct: 83 QLEFIHIHKTAALLEAAVVLGAIVGGGSDTQVEKLRKFARCIGLL 127
>gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis]
Length = 126
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT H + E TAI+AG+ LL+++FE +++ + + + + L +G G++
Sbjct: 5 RRGKPTNHKMFGEETAILAGDALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGAAGLV 64
Query: 161 GGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
GQ ++ + + + + I KT L+ A GAI+ A ER+R + +G
Sbjct: 65 AGQIVDIESEGKQVTLEDLEYIHINKTSKLLEAAVVCGAIIGGADDESTERVRKYARCIG 124
Query: 219 II 220
++
Sbjct: 125 LL 126
>gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
Length = 424
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 76/210 (36%), Gaps = 8/210 (3%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+ + +L+ Y GK+ R+ ++ + F V + + + +
Sbjct: 119 VADLNFSWAEEEEKVVLAPYDYVASNSGKEFRTLILNAFNAWFRVPPESLTIICDVVRML 178
Query: 83 HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
H SL+ DD+ DN +RRG+P H Y I GN + + + +L++
Sbjct: 179 HTSSLLIDDIQ--DNSLLRRGRPVAHSIYGVAQTINTGNYVY----FLAAKELNKLRNAA 232
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ + + +G + E + + KTG L A + + A
Sbjct: 233 SALEVFTAEMLNLHRGQGQELYWRDTLKCPTEDEYLKMVSNKTGGLFRMAVKLMQAESPA 292
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ LG+++Q+ADD +
Sbjct: 293 GP-MAPVCDKLVQLLGLVYQIADDYKNLTA 321
>gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
coagulans 36D1]
gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
coagulans 36D1]
Length = 289
Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 12/176 (6%)
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
L L + V A +E I I DD D+ +
Sbjct: 17 GMLCVNHHHLLGGKSASVFHVAACVELIILAFNILDDWQDQDHHRSPWMQDHA------- 69
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
+ + AF +++ K + + + + GQ DI++ + E
Sbjct: 70 ----GQSLTVETAFLLLAMSKLNGFLGSQKNNLAFQLIVDRINRSVHGQFADIRNAPLKE 125
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + K K+GAL AC GA++A + + + + +GI QL +DL D
Sbjct: 126 EEYIAVIKQKSGALCALACLCGAMLAG-NTTDLHLIGEYATGIGICAQLENDLDDV 180
>gi|330919993|ref|XP_003298844.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
gi|311327775|gb|EFQ93059.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 71/211 (33%), Gaps = 12/211 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL+ + LL Y GK IRS + V + +
Sbjct: 108 EDLIYGNGAAWTESKERILLGPYDYLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVV 167
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A ++ S
Sbjct: 168 GMLHTASLLVDDVE--DSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMNNPKL 225
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I ++ +L+L G+ E + KTG L A +
Sbjct: 226 IEIFTEELLNLHRGQGM-----DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKLM--- 277
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A +G++FQ+ DD L+
Sbjct: 278 -QAESETDVDCAPLVSTIGLLFQILDDHLNL 307
>gi|326431519|gb|EGD77089.1| hypothetical protein PTSG_07427 [Salpingoeca sp. ATCC 50818]
Length = 164
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +++ + MA + + +G+ FQ+ DD LDC
Sbjct: 1 MSHTCIVKYKTAFYSFYLPVAAAMHMAGIKDEKAFANAQEILLEMGVFFQVQDDYLDCYG 60
>gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88]
gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger]
Length = 389
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 73/204 (35%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ +L Y L GK IR L+ V + + + +H S
Sbjct: 80 DGQWSPDNERIVLGPYDYMLQHPGKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTAS 139
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ DN +RRG P H Y I + N + A + + +I Q
Sbjct: 140 LLIDDVE--DNSILRRGIPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQE 197
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + + KTG L A + + +S +
Sbjct: 198 LLNLHRGQGM-----DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-SSGKD 251
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
L +G+IFQ+ DD L+
Sbjct: 252 CVSLVNV---MGLIFQICDDYLNL 272
>gi|5533307|gb|AAD45122.1|AF164026_1 farnesyl pyrophosphate synthase [Xanthoceras sorbifolium]
Length = 148
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+MA + + ++ ++GI FQ+ DD LDC
Sbjct: 1 SFYLPVACALLMAGENLDNHVDVKNTLVDMGIYFQVQDDYLDCFG 45
>gi|61744003|gb|AAX55632.1| geranyl diphosphate synthase [Ips pini]
Length = 416
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 62/248 (25%), Gaps = 18/248 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHND----RLLSAIRYALLGGKKIRSFLVTEC 61
+++ K +D I +++ Q Q + RL AI Y + GK+ + +
Sbjct: 62 NEEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLREAIDYTVPYGKRFKGVHIVSH 121
Query: 62 ASLFNVNHLTAL----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
L I+ C D G K
Sbjct: 122 FKLLADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDIMDDSDTRRGKPTWYKLPGIGLN 181
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDE 170
+ + + + +L G + +
Sbjct: 182 AVTDVCLMEMFTFELLKRYFPKHPSYADIHEILRNLLFLTHMGQGYDFTFIDPVTRKINF 241
Query: 171 FIDETQVFMI--QKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDL 227
+ + + + E + MA+ + ++L +G++ Q +D
Sbjct: 242 NDFTEENYTKLCRYKIIFSTFHNTLELTSAMANVYDPKKIKQLDPVLMRIGMMHQSQNDF 301
Query: 228 LDCEEDLP 235
D D
Sbjct: 302 KDLYRDQG 309
>gi|289613364|emb|CBI59673.1| unnamed protein product [Sordaria macrospora]
Length = 746
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 16/217 (7%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
LD LL + + + Y L+ K +R + ++ ++
Sbjct: 436 LDSLLPSEEKL----GMEIVNAPFEYTRLMPSKNVRGTFIDALNLWAGLSEEVLGQIKEV 491
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ +H SL+ DD+ + + + + K +
Sbjct: 492 VDDLHTASLMFDDVEDGSELRRGNPAAHAVYGIPQTINSASLA-------ILEAVQKAKD 544
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
+ + G E++ + KTG L +
Sbjct: 545 LPIPGAVDIALEQLRDLHVGQSYDLYWTRHMTCPSESEYLEMVAKKTGGLF---LLLSRL 601
Query: 199 MAHASQNEKERL-RCFGENLGIIFQLADDLLDCEEDL 234
M+ E L +GI FQ+ DD + D
Sbjct: 602 MSEHMPKEVRSLVNDLVTQVGIYFQIRDDYQNLSSDE 638
>gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica]
Length = 127
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
Q+ I KT AL+ A GAI+ S + E LR F +G++
Sbjct: 83 QLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEELRTFARCIGLL 127
>gi|169842470|ref|ZP_02875575.1| hypothetical protein cdivTM_35209 [candidate division TM7
single-cell isolate TM7a]
Length = 44
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
+++ + + LGI FQ+ DD+LD E +
Sbjct: 6 QKMVEYSKLLGIAFQIKDDILDIEGNFE 33
>gi|157693593|ref|YP_001488055.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
gi|157682351|gb|ABV63495.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
Length = 307
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 3/129 (2%)
Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
+ + A + + + +++ ++ +Q M G
Sbjct: 80 DDIEDQDKDSYPWMRCQSGVAMNAANVLFALSFGVFSKLDHATELINSVYSYSIQSMQ-G 138
Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
Q LD+ E +E I ++K G+L C G I+A S +++ + LG+ Q
Sbjct: 139 QHLDMTVEPENEQDCLNIMRLKAGSLFVLPCMLGVILATGSFE--KKVEEYAYYLGMAEQ 196
Query: 223 LADDLLDCE 231
L +D L
Sbjct: 197 LENDYLGLF 205
>gi|134075491|emb|CAK48052.1| unnamed protein product [Aspergillus niger]
Length = 418
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 21/222 (9%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKK-----IRSFLVTECASLFNVNHLT 71
IL D+ + L + YA + GKK +R+ V ++ ++
Sbjct: 107 RILHDMSRFIEPYAGPPGESIALQPLEYAESVPGKKYWSEFLRAMNVWLRLPAQSIKYMD 166
Query: 72 ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
+ H + D +RRG+P HI Y E + + A +
Sbjct: 167 TI-------FAHLCASSVMLDDIQDGSDLRRGQPATHILYGESQTTNSALYGIVKALSLA 219
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+S + +L + + ++G + + KTG+
Sbjct: 220 ASTDGKHSQ------ILLESLSDSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFRC 273
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A + A A L LG FQ+ +D + +D
Sbjct: 274 ALRL--LEAEAGTKAIPELHHLVTLLGRYFQVYNDYRNLSDD 313
>gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
Length = 145
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
L ++ + + ++ + H++ D + GGK +R A +
Sbjct: 13 LSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH-------AGGKLLRPAFALLSAQA-GPD 64
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ V A + +D+ +RRG PT+H +Y A+ G+ L F
Sbjct: 65 YDKDRAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICF 124
Query: 129 EIISSP 134
+I+S+
Sbjct: 125 KILSAH 130
>gi|5007036|gb|AAD37789.1| farnesyl diphosphate synthase [Artemisia annua]
Length = 149
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++Q +M ++ ++ +G FQ+ DD LDC
Sbjct: 91 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFG 147
>gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli]
gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli]
Length = 127
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT HI Y E A++AG+ LL +AFE I+ + + + L IG +G++
Sbjct: 5 RRGKPTNHIVYGEDVAVLAGDALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGAEGLV 64
Query: 161 GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ++DI E +D ++ I KT L+ A GAI+ + + E+LR + +
Sbjct: 65 AGQVVDISSEGLSEVDLERLEFIHIHKTAKLLEGAVVLGAILGGGTDEQVEKLRKYARGI 124
Query: 218 GII 220
G++
Sbjct: 125 GLL 127
>gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis]
Length = 127
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRGKPT HI + E A++AG+ LL +AFE I+ + + + L IG +G++
Sbjct: 5 RRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLV 64
Query: 161 GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
GQ++DI E +D ++ I KT L+ A GAI+ + E E+LR + +
Sbjct: 65 AGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGI 124
Query: 218 GII 220
G++
Sbjct: 125 GLL 127
>gi|319647582|ref|ZP_08001802.1| ComQ protein [Bacillus sp. BT1B_CT2]
gi|317390430|gb|EFV71237.1| ComQ protein [Bacillus sp. BT1B_CT2]
Length = 293
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+ + E + + K K+GAL C GA++A + + + LGI
Sbjct: 123 MQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGAMLA--TGKFDPTVEKYAYQLGI 180
Query: 220 IFQLADDLL----DCEEDLPKK 237
Q+ +D D + D+ KK
Sbjct: 181 ASQIENDYKALFYDSKSDIAKK 202
>gi|189198934|ref|XP_001935804.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187982903|gb|EDU48391.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 418
Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 71/211 (33%), Gaps = 12/211 (5%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
+DL+ + LL Y GK IRS + V + +
Sbjct: 108 EDLIYGNGAAWTESKERILLGPYDYLYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKVV 167
Query: 80 ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
+H SL+ DD+ D+ +RRG P H + I + N + A ++ S
Sbjct: 168 GMLHTASLLVDDVE--DSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMSNPKL 225
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
I ++ +L+L G+ E + KTG L A +
Sbjct: 226 IEIFTEELLNLHRGQGM-----DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKLM--- 277
Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
A +G++FQ+ DD L+
Sbjct: 278 -QAESETDVDCAPLVSTIGLLFQILDDHLNL 307
>gi|322784733|gb|EFZ11559.1| hypothetical protein SINV_02852 [Solenopsis invicta]
Length = 315
Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 60/214 (28%), Gaps = 21/214 (9%)
Query: 38 RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-------GAAIECIHCYSLIHD 90
+ ++Y + G KK+ S + L N +E Y ++ D
Sbjct: 4 YITQVLQYNVSGTKKLHSLTLIYAYKLIASNEQQTQDNIYLVRILAWCLEMAMAYLVMID 63
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT----QLKDNIRSQL 146
D+ MD RRG+P + D I L+ + + + +
Sbjct: 64 DI--MDRSLFRRGQPCWYRHDDIGLMAINDGLLVESTVYYLIRKYFKGKECYDNLVETFQ 121
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ IG + + Q I K K + A +E
Sbjct: 122 QVIFKILIGQFLDMSSTFKKSNLDQFTMNQYNSIAKWKGYGTLFVPTVLAMHFAGTKDSE 181
Query: 207 K-----ERLRCFGENLGIIFQLADDLLDCEEDLP 235
L L +Q+ DD L C D
Sbjct: 182 IFKQSETILSELIIPL---YQIQDDYLGCFGDFE 212
>gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
Length = 289
Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 67/191 (35%), Gaps = 12/191 (6%)
Query: 38 RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
++ + + + GK+ RS + NV ++VG I+ +H SL+ DD+ D
Sbjct: 1 LVIEPYNHIMKIPGKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDIQ--D 58
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
+ +RRG P H + + ++T+ + +T + +
Sbjct: 59 SSVLRRGVPAAHQLFGVQFTMNTACYVITH-----ALIQTNEVGGAAANEIFCHELLELH 113
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
+G E + ++ KTG L + + K
Sbjct: 114 RGQGADIFWRDNSICPTEHEYKLMVVRKTGGLFLMLIRLLQLFS----ENKRDFSKLAGL 169
Query: 217 LGIIFQLADDL 227
+G+ FQ+ DD
Sbjct: 170 MGLFFQIRDDY 180
>gi|325067553|ref|ZP_08126226.1| geranylgeranyl pyrophosphate synthase [Actinomyces oris K20]
Length = 76
Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L S++ + I+ L +++ + L A GGK++R L A
Sbjct: 10 PELESRIIPALQTIEDRLMEVVTSADETINPPT-SHLAEA------GGKRLRPVLALLTA 62
Query: 63 SLFNV 67
L +
Sbjct: 63 QLGDP 67
>gi|52081669|ref|YP_080460.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
gi|52787054|ref|YP_092883.1| ComQ [Bacillus licheniformis ATCC 14580]
gi|18266382|gb|AAL67539.1|AF459919_3 ComQ protein [Bacillus licheniformis]
gi|52004880|gb|AAU24822.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
gi|52349556|gb|AAU42190.1| ComQ [Bacillus licheniformis ATCC 14580]
gi|301752359|gb|ADK89154.1| ComQ [Bacillus licheniformis]
Length = 289
Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+ + E + + K K+GAL C GA++A + + + LGI
Sbjct: 123 MQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGAMLA--TGKFDPTVEKYAYQLGI 180
Query: 220 IFQLADDLL----DCEEDLPKK 237
Q+ +D D + D+ KK
Sbjct: 181 ASQIENDYKALFYDSKSDIAKK 202
>gi|316969473|gb|EFV53567.1| polyprenyl synthetase superfamily [Trichinella spiralis]
Length = 683
Score = 43.7 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 48/180 (26%), Gaps = 4/180 (2%)
Query: 47 LLGGKKIRSFLVTEC--ASLFNVNHLTALRVGAAIECIHCYSLIHDDL-PSMDNGYIRRG 103
GGK IR L+T A++ + + + I + + + R
Sbjct: 500 TAGGKGIRGRLLTGALEANVLFDDRTSLAQKAHTIASAVEMLHAGFLIQDDIMDNASTRR 559
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
+ ++ I G L + A + S I G
Sbjct: 560 GKPCWYRQVGLSGINDGVLLQSAASWLPSVVLDDHPQKHAIVSSFVEATVITSLGQKLDM 619
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQ 222
D + ++ F + G ++A E E L+ G FQ
Sbjct: 620 EKARPDTCSWDRYRELVTNKTAHYSFWFPLKVGLLLADIQLEEVEIELKNICYEFGFYFQ 679
>gi|14422404|dbj|BAB60821.1| putative FPP synthase 1 [Eucommia ulmoides]
Length = 305
Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 60/213 (28%), Gaps = 27/213 (12%)
Query: 42 AIRYALLGGKKIRSFLVTEC-------------ASLFNVNHLTALRVGAAIECIHCYSLI 88
+ Y + GGK R V + A L + +G IE + +L+
Sbjct: 1 MLDYNVPGGKLNRGLSVVDSYKLLKELSSSKKGAQLTESEIFHSSVLGWCIEWLQACALV 60
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
DD+ MD+ + RRG+ + AI G L + I+ + +
Sbjct: 61 LDDI--MDSSHTRRGQMCWYKLPKVGMIAINDGLILRNHVPRILKKHFRSKPYYLELLDL 118
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHA 202
+ G + + + E + + +M
Sbjct: 119 FHEVECQTVGGQMIDLITTLVGEIDLSEYSLPTHRQITVSKTSYYSFYLPVACALLMTGE 178
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
++ + DD LDC D
Sbjct: 179 KLESHSGMKDILIE------IQDDYLDCFGDPE 205
>gi|326469052|gb|EGD93061.1| farnesyl pyrophosphate synthetase [Trichophyton tonsurans CBS
112818]
Length = 321
Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 29/111 (26%), Gaps = 5/111 (4%)
Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
++ ++ +L T L + + ++ + +
Sbjct: 106 WRAMLKHFRSHPAYINLVELFHETTFQTELGQLCDLITAPEDNVDLNNFNMDKFNFIVIY 165
Query: 187 ALMCFACESGAIMAH-----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ +A A+ + LG FQ DD LD
Sbjct: 166 KTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 216
>gi|212638393|ref|YP_002314913.1| competence regulatory protein comQ [Anoxybacillus flavithermus WK1]
gi|212559873|gb|ACJ32928.1| Competence regulatory protein ComQ [Anoxybacillus flavithermus WK1]
Length = 296
Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ D+ + E + + + K+G+L+ AC GA++A + + + + +GI
Sbjct: 134 HGQQTDVTCDVQTEAEYIKMVEKKSGSLVAMACVIGALLAG--KEDIAAIETYASYIGIA 191
Query: 221 FQLADDL 227
Q+ +DL
Sbjct: 192 AQIDNDL 198
>gi|73962111|ref|XP_547662.2| PREDICTED: similar to Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Canis familiaris]
Length = 262
Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
E + N+G FQ+ DD LD D
Sbjct: 183 AKEHANAKKILLNMGEFFQIQDDFLDLFGD 212
>gi|281181748|dbj|BAI58053.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
Length = 359
Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 19/222 (8%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
D L+ + + Y GK RS L+ +L V + A+
Sbjct: 45 DDLVNRRPGNSDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAVG 104
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
+H SL+ DD+ D+ +RRG P H + I + N + A + +
Sbjct: 105 MLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSNI 162
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI-- 198
++ + ++SL G+ E + + KTG L +
Sbjct: 163 SVFADELVSLHRGQGM-----DLFWRDTLTCPTEEEYLEMVGNKTGGLFRLGIKLMQAES 217
Query: 199 ------MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ + + L +G+IFQ+ DD ++ + D
Sbjct: 218 SVSSVSGSSSPPLDCVPLVNL---VGLIFQIRDDYVNLKSDE 256
>gi|70992035|ref|XP_750866.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
gi|66848499|gb|EAL88828.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
fumigatus Af293]
Length = 787
Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 56/210 (26%), Gaps = 12/210 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ L I Y + K +RS ++ V+ + ++ ++ +H
Sbjct: 472 DELDHSWHKPARTALQGPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLH 531
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SLI DD+ R + + + + + N
Sbjct: 532 NASLILDDIEDNSPKRRGRPATHTIFGHSQAINS-------ANFMFVQAVQVARQFRNPN 584
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHA 202
+L G + ++ + G A
Sbjct: 585 VVDILLEELENLHLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRLMQAEKKGT 644
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + +RL G FQ+ DD ++
Sbjct: 645 TEVDLDRLTVL---FGRFFQIRDDYMNLRS 671
>gi|67541280|ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
gi|40739019|gb|EAA58209.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
gi|259480406|tpe|CBF71507.1| TPA: ThiJ/PfpI family protein (AFU_orthologue; AFUA_3G01210)
[Aspergillus nidulans FGSC A4]
Length = 933
Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 35/102 (34%)
Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
+ K + D+ + + G Q + E + + ++KT L
Sbjct: 448 AMQKVRALDDPVCLDIYLEEMHNLFVGQSFDLYWTRQGQCPSEDEYLAMVRLKTSGLFRL 507
Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A +A + RL ++LG FQ+ DD + +
Sbjct: 508 LTRLMAQIAPVQRGLDRRLSNLSDSLGEFFQIRDDYKNLSSE 549
>gi|159124434|gb|EDP49552.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
fumigatus A1163]
Length = 787
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 56/210 (26%), Gaps = 12/210 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ L I Y + K +RS ++ V+ + ++ ++ +H
Sbjct: 472 DELDHSWHKPARTALQGPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLH 531
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SLI DD+ R + + + + + N
Sbjct: 532 NASLILDDIEDNSPKRRGRPATHTIFGHSQAINS-------ANFMFVQAVQVARQFRNPN 584
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHA 202
+L G + ++ + G A
Sbjct: 585 VVDILLEELENLHLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRLMQAEKKGT 644
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + +RL G FQ+ DD ++
Sbjct: 645 TEVDLDRLTVL---FGRFFQIRDDYMNLRS 671
>gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
Length = 365
Score = 43.3 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 69/221 (31%), Gaps = 8/221 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG---KKIRSFLVTECA 62
+L + I + ++ + S + + + L SA Y G K+ ++ A
Sbjct: 56 AKELPDPFALIKEEVSEVTNRLRSMVVAEVPE-LTSAAGYFFRAGAEGKRTCPTVLLLMA 114
Query: 63 SLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
S + + + A + S+ + + T +
Sbjct: 115 SAISTDMSDPIVGSENKPRARHMRVAEITEMIHISSLIHDDVLDNADTRRGMDSLNFTVG 174
Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
+L F + + + + + L T L Q+ +
Sbjct: 175 KKLAVLAGDFLLFRAFSAAVALDNTEVVSLLATAVNNLVTGELMQLTITPAQRCSMDYYL 234
Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
KT AL+ +C++ A+++ + + +G +LGI
Sbjct: 235 QKTYYKTAALISNSCKAIAVLSGQTTEVQALAYQYGRHLGI 275
>gi|303391601|ref|XP_003074030.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
ATCC 50506]
gi|303303179|gb|ADM12670.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
ATCC 50506]
Length = 292
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 70/217 (32%), Gaps = 22/217 (10%)
Query: 20 LDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGA 77
+ +++ + + +N +L + Y L GGK++R + +L + L VG
Sbjct: 2 IKEIVKRKVLQLSDYYNKSEILFLLDYNLEGGKELRYKAYIHVLNALNGEMNEKNLTVGY 61
Query: 78 AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
IE + LI DDL + + + G
Sbjct: 62 TIELLQAALLITDDLMDNSEVRREKPCYYLKRGTKVIKDAFFLLG--------------- 106
Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ ++ + GQ D + E + + + A
Sbjct: 107 -VIRKMIDKRMKRPYSYSIFKTCIGQTHDTIRKTRAEYNIEAYTAIAESKTGAYTFYLPA 165
Query: 198 IMA--HASQNEKERLRCFGENLG-IIFQLADDLLDCE 231
I A + E E L F NLG +IFQ+ DD L+
Sbjct: 166 IFGYISAKKKEPEYLWDFC-NLGALIFQMQDDYLNFF 201
>gi|317156125|ref|XP_001825412.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
Length = 692
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 75/210 (35%), Gaps = 9/210 (4%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ ++ ++L + IR L K +R V + + RV + E +H
Sbjct: 387 IDAIEEEAESPKPEQLGTEIR--SLPSKGVREAFVDAMNVWLVLPNDVVNRVKSIAETLH 444
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ D+ +RRG+P H + + I + N LL A + Q ++
Sbjct: 445 NASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMDVF 502
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ M +L Q E + + + KTG L A
Sbjct: 503 VEEMRNLFIGQ-----SFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLMTEKASTQ 557
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
N L LG FQ+ DD + ED
Sbjct: 558 HNSTITLDSLVSLLGQYFQIRDDYKNLTED 587
>gi|169613953|ref|XP_001800393.1| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15]
gi|160707244|gb|EAT82446.2| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15]
Length = 347
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 13/212 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAA 78
+DL+ + + LL Y GK IRS + V
Sbjct: 109 EDLIYGNGATWTEEKERILLGPYDYLYGHPGKDIRSQCIAAFNLWLKVPPERIGSHNACQ 168
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +H SL+ DD+ D+ +RRG P H + I N + A + +
Sbjct: 169 LGWLHTASLLVDDVE--DSSLLRRGIPVAHSIFGTPQTINTANYVYFKALQDLLRMNNPK 226
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
I ++ +L+L G+ E + KTG L A +
Sbjct: 227 LIEIFTEELLNLHRGQGM-----DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKLMQA 281
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + +G++FQ+ DD L+
Sbjct: 282 ESAVDVDCAPLVST----IGLLFQILDDHLNL 309
>gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 16/226 (7%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
P L + KR+D D+ +L + S ++ + L++ +Y GK+IR L
Sbjct: 907 PRALSTSQKRMDK--DNSMLLSLSPPASKEEEELIAPFKYICSIPGKQIRVKL--GFNLW 962
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
NV++ + +E +H SL+ DD+ D+ +RRG P H Y T + N +
Sbjct: 963 LNVDNEIVNAISEIVEMLHNASLMIDDIE--DSSELRRGMPVTHRIYGLPTTLNTANYIY 1020
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + + + ++ +L L G++ E + + K
Sbjct: 1021 FVALSKTVQLRHRDAVKVFTESLLDLHRGQGME-----IYWRDAVICPTEAKYLDMVIKK 1075
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
TG L + + + + L FQ+ DD ++
Sbjct: 1076 TGGLFRLGVNMLQLFSTNKTDYNQLLNDMA----TYFQIRDDYMNL 1117
>gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 86
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAA 78
L LL S + +R+ RYALL GK +R L+ E A + +L
Sbjct: 15 LARLLRDLESRWPSDG-ERVHRISRYALLPAGKLLRPLLLVESARAVGGGYEESLPAALG 73
Query: 79 IECIHCYSLIHDD 91
+E +H SL+HDD
Sbjct: 74 VEYLHAGSLVHDD 86
>gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis]
Length = 456
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 66/227 (29%), Gaps = 22/227 (9%)
Query: 27 TASHMQTQHNDRLLSAIRYALLG-GKKIR----SFLVTECASLFNVNHLTA---LRVGAA 78
S + + + ++Y GK R S LV VNH
Sbjct: 126 LQSQLLEFIPNEMKDIVKYVFQSEGKLTRQNYLSALVGLLKFAMGVNHSQPIGSDHRMLI 185
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+S +DN IRRGK + + I+ G+ L + + IS +
Sbjct: 186 HSIQLIHSASLLHDDILDNSEIRRGKKAPYKIFGNKRTILLGDYLFSKSCLNISLIENIN 245
Query: 139 KDNIRS---------QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
S + ++ + + E E +
Sbjct: 246 AMKCISIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVENYFEKYLLKSYYKTASLFS 305
Query: 190 CFACESGAIMAHASQNEKE---RLRCF--GENLGIIFQLADDLLDCE 231
++ A N+ + + G N G+ FQL DD+LD
Sbjct: 306 FGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFT 352
>gi|284053405|ref|ZP_06383615.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 116
Score = 42.9 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 218 GIIFQLADDLLDCEEDLP 235
G+ FQ+ DD+LD
Sbjct: 1 GLAFQIVDDILDFTGSTE 18
>gi|289759542|ref|ZP_06518920.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289715106|gb|EFD79118.1| predicted protein [Mycobacterium tuberculosis T85]
Length = 230
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 8/207 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 25 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 84
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 85 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGD 142
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 143 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 200
Query: 182 KMKTGALMCFACESGAIMAHASQNEKE 208
KT AL C GA++A+A E
Sbjct: 201 AGKTAALTGCCCALGALVANADDATIE 227
>gi|85000425|ref|XP_954931.1| prenyl transferase [Theileria annulata strain Ankara]
gi|65303077|emb|CAI75455.1| prenyl transferase, putative [Theileria annulata]
Length = 468
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E L G ++G+ FQ+ DDLLD +L
Sbjct: 298 ELLYIIGVHIGLSFQMCDDLLDYNSNLE 325
>gi|71027225|ref|XP_763256.1| prenyl transferase [Theileria parva strain Muguga]
gi|68350209|gb|EAN30973.1| prenyl transferase, putative [Theileria parva]
Length = 453
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
E L G ++G+ FQ+ DDLLD +L
Sbjct: 290 ELLYIIGVHIGLSFQMCDDLLDYNSNLE 317
>gi|19074981|ref|NP_586487.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
gi|19069706|emb|CAD26091.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
Length = 292
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 69/218 (31%), Gaps = 22/218 (10%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
I I+ +LQ +S LL Y L GGK++R N +
Sbjct: 2 IKEIVKSRILQMSSEYSKPEVLFLLD---YNLGGGKELRYKAYVHVLKALNGEVSMENLI 58
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
+ L+ D ++ R + + + LL +++S
Sbjct: 59 MGYSVELLQAVLLIVDDIMDNSKIRRGK--PCYYLKRGMKTVKDAFFLLGAIRKLLSEKM 116
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + L GQ D + E + + +
Sbjct: 117 KKPYSDSVFKTCL-------------GQTHDTIRKTRSEYSLETYVAIAESKTGAYTFYL 163
Query: 196 GAIMA--HASQNEKERLRCFGENLG-IIFQLADDLLDC 230
A++ A++ E L F NLG +IFQ+ DD L+
Sbjct: 164 PAVLGYVAANKAEPACLWDFC-NLGALIFQMQDDYLNF 200
>gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans]
Length = 396
Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
++ + ++ Y L GK +R ++ V + + + +H S
Sbjct: 72 DGKWSQENEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTAS 131
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ DN +RRG P H Y I + N + A + + K+ ++ Q
Sbjct: 132 LLIDDVE--DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQE 189
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + + KTG L A + + ++ +
Sbjct: 190 LLNLHRGQGM-----DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-STGKD 243
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
L LG++FQ+ DD L+ D
Sbjct: 244 CVALVNV---LGLVFQICDDYLNL-SDT 267
>gi|167462439|ref|ZP_02327528.1| Pre-ComX modifying enzyme [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383890|ref|ZP_08057630.1| isoprenyl transferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321151605|gb|EFX44685.1| isoprenyl transferase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 324
Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 12/178 (6%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
+ +F N+ R+GA E + I DDL + V + E A
Sbjct: 43 MTLYIHRMFGGNNPCLYRLGALAELLILGLDIMDDL------QDKDNTGKVWMAMPEAAA 96
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ NG+L A ++ K+ + + + + GQ +DI + E +
Sbjct: 97 MNVMNGMLMAA---LAELGNMKKEYAGQPFPCASEVSRMITTAINGQHIDIMGKVQTEEE 153
Query: 177 VFMIQKMKTGALMCFACESGAIMAH---ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + K+ L + G A S E E+L+ F G++ Q+ +D+ D
Sbjct: 154 YVAMVQQKSCTLFRLSFYLGYSSAGPNLVSDLEAEQLQQFAVYAGMLGQIQNDIQDLT 211
>gi|312216572|emb|CBX96522.1| hypothetical protein [Leptosphaeria maculans]
Length = 510
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 81/226 (35%), Gaps = 12/226 (5%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
P+ L + I + +DL+ + LL Y GK IRS +
Sbjct: 161 PTPLSPPADHIKDVGEDLIYGNGVAWTQEKERILLGPYDYLYGHPGKDIRSQCIAAFNLW 220
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+V + + +H SL+ DD+ D+ +RRG P H + I + N +
Sbjct: 221 LHVPAERLEIITRVVGMLHTASLLVDDVE--DSSLLRRGIPVAHSIFGIPQTINSANYVY 278
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A + + + +I ++ +L+L G+ E + K
Sbjct: 279 FKALQHLLLMQNPKLVDIFTEELLNLHRGQGM-----DLYWRDSLTCPSEADYLEMVGNK 333
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
TG L A + + + + +G++FQ+ DD L+
Sbjct: 334 TGGLFRLAIKLMQAESAVDVDCTPLVST----IGLLFQILDDHLNL 375
>gi|296085594|emb|CBI29369.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 212 CFGENLGIIFQLADDLLDCEE---DLPK 236
+ +NLG+ FQL D++LD L K
Sbjct: 5 EYAKNLGLAFQLIDNVLDFTGTSASLGK 32
>gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 322
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 12/211 (5%)
Query: 28 ASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ L+ Y + GK+IRS L+ V+ + + +H S
Sbjct: 12 DPKWSESQENILMEPYIYISQNPGKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNAS 71
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDN 141
L+ DD+ DN +RRG P H Y I A N + AF+ +
Sbjct: 72 LLMDDVE--DNSELRRGLPVAHTIYGVPQTINAANYVYFLAFQELLQLRSGVMGKGKDKE 129
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ ++ +G E + + K G L+ A + +
Sbjct: 130 VDLVAAVNEELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKLMMAKSD 189
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ + + + + FQ+ DD ++ +
Sbjct: 190 SNVDYVPLV----NLISVWFQIRDDYMNLQS 216
>gi|326468439|gb|EGD92448.1| geranylgeranyl pyrophosphate synthetase [Trichophyton tonsurans CBS
112818]
gi|326482590|gb|EGE06600.1| geranylgeranyl pyrophosphate synthetase [Trichophyton equinum CBS
127.97]
Length = 382
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ + +L Y + GK IR L+ V + + + +H S
Sbjct: 58 EAMWTAGKENIVLGPYSYTVNQPGKDIRGQLIAAYNRWLQVPEESLAVITKVVVMLHTAS 117
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ D+ ++RRG P H + I + N + A + I K+ NI +
Sbjct: 118 LLIDDVE--DSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKE 175
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+++L G+ E + KTG L A + + +
Sbjct: 176 LMNLHRGQGM-----DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDC 230
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
+ +G++FQ+ DD L+
Sbjct: 231 VPLVD----LMGLMFQVCDDYLNL 250
>gi|325289010|ref|YP_004265191.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324964411|gb|ADY55190.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 304
Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 12/175 (6%)
Query: 57 LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
LV +F+ R AA+E + I DDL D
Sbjct: 46 LVILHYQMFDGQSTDIFRAAAAVELMILSLDIFDDL------QDNDNFSVPWNNIDHAIV 99
Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
+ GLL + + + + L+ + GQ +D+ + E
Sbjct: 100 MNIATGLLMLSTKSLEHTSFEPNKKAMGTNYLNSCVIKAI----NGQHIDLLNLIESEKD 155
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
+ + K+G+LM AC G +A S+N + + + E+LGII Q+ +D+ D
Sbjct: 156 YIEMVRSKSGSLMASACLVGTALA--SENHHDVVNKYAEHLGIIAQIKNDINDIF 208
>gi|322704302|gb|EFY95899.1| farnesyl pyrophosphate synthetase 1 [Metarhizium anisopliae ARSEF
23]
Length = 379
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 15/200 (7%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRG 103
GK R N ++ + +E + + LI DD+ MD+ RRG
Sbjct: 47 GKLHRGLATLYIGKQLAKNEVSEEQSKQLSVLAWLVEMLGAHYLILDDI--MDDSTTRRG 104
Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG---ML 160
+P + Q I +L + + + + L + + + +
Sbjct: 105 EPCWYRQPQIGLMAINDACILKSTIFFLLKTFFRQHPAYTNMVDLFVDNGLHTELGQLCD 164
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGI 219
+ Q + I K K+ + A+ + R F LG
Sbjct: 165 LAAAREPDIANFTMEQYWAIVKDKSSYSISGPVTLALEYWQLATPKNLRQTRDFSVALGE 224
Query: 220 IFQLADDLLDCEED---LPK 236
FQ+ DD +D D K
Sbjct: 225 YFQVNDDYVDVFGDYAVTGK 244
>gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
10500]
gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
10500]
Length = 392
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ ++ Y + GK IR ++ + V + + + +H S
Sbjct: 77 EGLWTQEKESIIMGPYDYISKQPGKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNAS 136
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ DN +RRG P H + I + N + A + + + +I ++
Sbjct: 137 LLIDDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEE 194
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + + KTG L A + A +
Sbjct: 195 LLNLHKGQGM-----DLFWRDTLTCPTEEEYLEMVDNKTGGLFRLAVKLM----QAESDT 245
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 246 GRDCVPLVNVMGLIFQICDDYLNL 269
>gi|195582416|ref|XP_002081024.1| GD25915 [Drosophila simulans]
gi|194193033|gb|EDX06609.1| GD25915 [Drosophila simulans]
Length = 383
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 53/221 (23%), Gaps = 33/221 (14%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALR 74
++ D+ T ++ + ++Y + GKK R L ++
Sbjct: 93 DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ + + + E + A N L + +
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYAIL 212
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
K ++ L H I G + + +
Sbjct: 213 KKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNY----------------------- 249
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + +G FQ+ DD LDC +
Sbjct: 250 -------KDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPE 283
>gi|218680010|ref|ZP_03527907.1| putative octaprenyl-diphosphate synthase [Rhizobium etli CIAT 894]
Length = 124
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 215 ENLGIIFQLADDLLDCEE---DLPK 236
NLG+ FQL DD LD DL K
Sbjct: 1 MNLGLAFQLVDDALDYGGKAADLGK 25
>gi|194015360|ref|ZP_03053976.1| quorum-sensing protein [Bacillus pumilus ATCC 7061]
gi|194012764|gb|EDW22330.1| quorum-sensing protein [Bacillus pumilus ATCC 7061]
Length = 307
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ +D+ E +E I K K G+L C G I+A S + + + LG+
Sbjct: 136 MQGQHMDMTLEPKNEQDCLDIMKSKAGSLFVLPCVLGVILATGSFE--KNVEEYAYYLGM 193
Query: 220 IFQLADDLLDCE 231
QL +D L
Sbjct: 194 AEQLENDYLGLF 205
>gi|321466396|gb|EFX77392.1| hypothetical protein DAPPUDRAFT_305827 [Daphnia pulex]
Length = 298
Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 23/193 (11%)
Query: 36 NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
++ LL Y L + GK+IR L ++I+D +
Sbjct: 24 DEILLQPFTYLLQVQGKQIRVKLSLAF-------------DYWLHINPEKLNIINDVVQM 70
Query: 95 MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ N + RG P H Y + I + N + E + + + +L L
Sbjct: 71 LHNASLLRGIPVAHSIYGVASTINSANYVYFLGLEKVLGLNHPQATEVFCEQLLELHRGQ 130
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
G++ E + ++ KTG L A + + + + L
Sbjct: 131 GME-----IYWRDSYVCPTEEEYRLMIVRKTGGLFGLAVRLMQLFS-TTTIDMNPLMAI- 183
Query: 215 ENLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 184 --LGLYFQIRDDY 194
>gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
Length = 479
Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFG 214
Q G M + +K+ +LM + ++ +NE E +G
Sbjct: 309 QTPGLGVMEGPRTREEAWDLYLRKTYLKSASLMAKGARASVVLGGCGENEVWKEVAYAYG 368
Query: 215 ENLGIIFQLADDLLDC 230
+LGI +QL +D LD
Sbjct: 369 RSLGIAYQLIEDTLDY 384
>gi|145613371|ref|XP_363775.2| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
gi|145020455|gb|EDK04584.1| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
Length = 702
Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 73/222 (32%), Gaps = 36/222 (16%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVG 76
L + + + + + + IRY + K R+ LV +V +
Sbjct: 400 DRLKHKVTKATTTTAATAEEVISAPIRYIQSMPSKGFRAALVDCYNMWLDVPQREMEIIK 459
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
I C+H SL+ DD+ +RRG P H+ Y I + L A
Sbjct: 460 TVINCLHDSSLLLDDIEDDSK--LRRGFPATHLVYGPAATINSATYLYVQALFF------ 511
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
G E +TQ F + + KTGA + E
Sbjct: 512 ---------------------GQSLDLHWTFNRECPTKTQYFNMIEQKTGAFLSLVAELM 550
Query: 197 AIMAHASQNE------KERLRCFGENLGIIFQLADDLLDCEE 232
+++ AS E + + F G+ FQ+ DD L+
Sbjct: 551 MVVSAASDYESSTDSPENIFQTFSYQSGLYFQVRDDYLNITS 592
>gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase
[Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus
nidulans FGSC A4]
Length = 396
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 28 ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
++ + ++ Y L GK +R ++ V + + + +H S
Sbjct: 72 DGKWSQENEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTAS 131
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ DN +RRG P H Y I + N + A + + K+ +I Q
Sbjct: 132 LLIDDVE--DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQE 189
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+L+L G+ E + + KTG L A + + ++ +
Sbjct: 190 LLNLHRGQGM-----DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-STGKD 243
Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
L LG++FQ+ DD L+ D
Sbjct: 244 CVALVNV---LGLVFQICDDYLNL-SDT 267
>gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
Length = 340
Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 83/222 (37%), Gaps = 13/222 (5%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV 67
+ + ++ + + ++ + A + GK RS L E AS+ +
Sbjct: 11 KAFCRSVEDRVRQQVDSLPPAIRGPACHHFGIREAGGKSPGMGKIARSRLCAELASMVDG 70
Query: 68 NHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
H+T R A + + MD RRG+ V + Y AI+ G+ LL
Sbjct: 71 PHVTIPRERAITAATAIEMIHNFGLIHDDIMDQDEERRGRKAVWVAYGTGMAILLGDILL 130
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
A +I +S + + + + G + + +++ I + K
Sbjct: 131 ATAVKIAASVGNTRI--------ADIFNQAIGKLIEGQLLDMGSNIGTTLEELWGIAEKK 182
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
T +L A S A +A +Q + E + F + G+ FQ +D
Sbjct: 183 TASLFELAAMSIAELACVTQRQGEAMESFSRHYGVAFQYMND 224
>gi|119499417|ref|XP_001266466.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119414630|gb|EAW24569.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 714
Score = 42.1 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 21/213 (9%)
Query: 38 RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
LL+ Y + L K +R V + T ++ + + +H SL+ DD+
Sbjct: 419 HLLAPAEYISSLPSKGVREAFVDALNVWLMLPDRTVTQLKSIAQTLHNASLMLDDIEDSS 478
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
R ++ I ++ + + D+ + + +
Sbjct: 479 PLRRGRPATHTVF-------VVGQTINSANFLLIQAADQVRRLDDSQCMDIFMEEMRLLF 531
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGE 215
+G Q E E + + + KTG L A A + + L
Sbjct: 532 RGQSFDLYWTRQGECPSEEEYLAMIRNKTGGLFRLIARLMAQKAPFQNHSLHTSLESMAG 591
Query: 216 NLGIIFQLADDLLDCEE------------DLPK 236
LG FQ+ DD + E D K
Sbjct: 592 QLGEYFQIRDDYKNLTEEYTGQKGFCEDLDEGK 624
>gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
Iowa II]
gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
Iowa II]
Length = 466
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 66/227 (29%), Gaps = 22/227 (9%)
Query: 27 TASHMQTQHNDRLLSAIRYALLG-GKKIR----SFLVTECASLFNVNHLTA---LRVGAA 78
S + + + ++Y GK R S LV VNH
Sbjct: 126 LQSQLLEFIPNEMKDIVKYVFQSEGKLTRQNYLSALVGLLKFAIGVNHSQPIGLDHRMLI 185
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+S +DN IRRGK + + I+ G+ L + + IS +
Sbjct: 186 HSIQLIHSASLLHDDILDNSEIRRGKKAPYKIFGNKKTILLGDYLFSKSCLNISIIENIN 245
Query: 139 KDNIRS---------QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
S + ++G+ + E +
Sbjct: 246 AMKCISIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKYLLKSYYKTASLFS 305
Query: 190 CFACESGAIMAHASQNEKE---RLRCF--GENLGIIFQLADDLLDCE 231
++ A N+ + + G N G+ FQL DD+LD
Sbjct: 306 FGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILDFT 352
>gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
Length = 345
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ +TGAL + GA+++ A + + L +GE LG+
Sbjct: 165 HHLEVLAGRTGALTAVSGRLGALVSGADPSAVDALARYGERLGMA 209
>gi|121701357|ref|XP_001268943.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
gi|119397086|gb|EAW07517.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
Length = 372
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 73/203 (35%), Gaps = 12/203 (5%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
++ L+ Y GK IR L+ V + + + +H SL+
Sbjct: 60 WSQEYEKILMGPYDYMQQHPGKDIRRQLINAFNVWLQVPPDSLAIITKVVGMLHTASLLI 119
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ DN +RRG P H + I + N + A + + +I Q +L+
Sbjct: 120 DDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIYVQELLN 177
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + + KTG L A + + A ++ +
Sbjct: 178 LHRGQGM-----DLFWRDTLTCPTEEEYLEMVGNKTGGLFRLAIKLMQAESTAGKDCVKL 232
Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
+ +G+ FQ+ DD L+
Sbjct: 233 VNV----MGLTFQICDDYLNLSS 251
>gi|119470882|ref|XP_001258098.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119406250|gb|EAW16201.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 764
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 57/208 (27%), Gaps = 12/208 (5%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
+ L + I Y + K +RS ++ V+ + ++ ++ +H
Sbjct: 449 QELEHSWYKPAKTALQAPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLH 508
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SLI DD+ R + + + + + N
Sbjct: 509 NASLILDDIEDHSPKRRGRPATHTIFGHSQAINS-------ANFMFVQAVQVARQFRNPN 561
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHA 202
+ +L G + ++ + G A
Sbjct: 562 AVDILLEELENLYLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRLMQAERKGT 621
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
++ + + L G FQ+ DD ++
Sbjct: 622 TEVDLDGLTVL---FGRFFQIRDDYMNL 646
>gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
43021]
Length = 326
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++AH + +GE G++FQ+ DDLLD
Sbjct: 180 TAALFRASCLVAHPDG---RSMAEYGERFGVLFQILDDLLDLASTAE 223
>gi|322376314|ref|ZP_08050807.1| putative farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Streptococcus sp. M334]
gi|321282121|gb|EFX59128.1| putative farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase [Streptococcus sp. M334]
Length = 321
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 21/223 (9%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
L S+ ++ RID+++ +L + + Q+++ L ++ G + R L
Sbjct: 8 TLNSEEKDFLFRIDSMIKSILFE----LPVQYHEILQ------VVNGSRFRPLLTYYGYK 57
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
LF+ N + A + S +D R TVH QY A++ L
Sbjct: 58 LFSENLNEKVYKSAIAIELIHKS-SIIIDDIIDQDDKRHSIYTVHKQYSIDEALVITVFL 116
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
L E++S + + M G + ++ +
Sbjct: 117 LGKCIELLS----------EIDDSTIRVFSRMIIRMCQGTIQELNIDMNVSIDKIKEILD 166
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ + C + ++ + + + L G LG +FQL +D
Sbjct: 167 NQTSQVIQNCLVIGMKSYDPELDNQHLAIIGYKLGYLFQLLND 209
>gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
513.88]
Length = 696
Score = 42.1 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 66/230 (28%), Gaps = 22/230 (9%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
LDD + T + LL+ Y L K +R + + + +
Sbjct: 386 LDDREKERDRV--TLGTEHLLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSI 443
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +H SL+ DD+ + A I + + +L
Sbjct: 444 AKTLHNASLMLDDIEDGSPLRRGQPATHTVF-------GQALTINSANFVLIQAMDQVRL 496
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
++ R + G QDE E + + + KTG L
Sbjct: 497 LEDSRCLDIFVEETRNLFIGQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQ 556
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD----CEE--------DLPK 236
A + +N L + +G FQ+ DD + D K
Sbjct: 557 KATSKKNRCLPLEPLVDLMGEYFQIRDDYKNLAEEYTGQKGFCEDLDEGK 606
>gi|325143454|gb|EGC65779.1| octaprenyl-diphosphate synthase [Neisseria meningitidis
M01-240013]
Length = 61
Score = 42.1 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L E+ +++ +++ + + + +Q ++SA GGK++R +
Sbjct: 8 FQRHLPEDLAKVNEVINRAVQSDVALI-SQIGTYIISA------GGKRLRPIMTILAGKA 60
>gi|13383251|dbj|BAB39476.1| putative GGPP synthase 1 [Youngia japonica]
Length = 126
Score = 42.1 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 97 NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
N RRGKPT HI Y E A++AG+ LL+++FE +++ + + + + L IG
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHLATATKGVSSDRILRAIGELAKCIGS 60
Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
+G++ GQ++DI + AL+ + GAIM S E E+LR F
Sbjct: 61 EGLVAGQVVDICSRRRRCRIRPFGVYPFTQDAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 215 ENLGII 220
++G++
Sbjct: 121 RSIGLL 126
>gi|326905223|gb|EGE52156.1| LOW QUALITY PROTEIN: polyprenyl synthetase idsB [Mycobacterium
tuberculosis W-148]
Length = 222
Score = 41.7 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 8/206 (3%)
Query: 6 PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTEC 61
+ L+ +L + + T L +A R G GK R+ LV
Sbjct: 21 KALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAA 80
Query: 62 ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
A+ + A V AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+
Sbjct: 81 AAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGD 138
Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
L A I++ + + + L L + +
Sbjct: 139 ALHATAVRILTGLTDECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMA 196
Query: 182 KMKTGALMCFACESGAIMAHASQNEK 207
KT AL C GA++A+A
Sbjct: 197 AGKTAALTGCCCALGALVANADDATI 222
>gi|317028454|ref|XP_001390105.2| hypothetical protein ANI_1_1118034 [Aspergillus niger CBS 513.88]
Length = 569
Score = 41.7 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
Q + + KTG L I + A L +G +
Sbjct: 395 DLHWKFQKTCPTTGEYLTMVDNKTGGLFRMTLRLLEIESKAEP--CPDLMQLITLMGRYY 452
Query: 222 QLADDLLDCEEDL 234
Q+ DD L+ D
Sbjct: 453 QIRDDYLNLTSDE 465
>gi|121717308|ref|XP_001276070.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
gi|119404227|gb|EAW14644.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
Length = 718
Score = 41.7 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 15/224 (6%)
Query: 19 ILDDLLLQTAS-HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
+L+D++ + + + +L RY L K R + V + +
Sbjct: 395 VLEDMVQLARTCDLPDLSDTVILQPYRYLTSLPSKGFRDQAIDSINKWLKVPPKSVKMIK 454
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
++ +H SL+ DDL DN +RRGKP+ H Y + + A +I + +
Sbjct: 455 DVVKMLHSASLMLDDLE--DNSPLRRGKPSTHSIYGMAQTVNSATYQYITATDITAQLQN 512
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+I + + L + + MKTG L
Sbjct: 513 SETFHIFVEELQQLHVGQ-----SYDLYWTHNTLCPTIAEYLKMVDMKTGGLFRMLTRM- 566
Query: 197 AIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
++A + +K + F +G FQ+ DD + D K
Sbjct: 567 -MIAESPVVDKVPNSDMNLFSCLIGRFFQIRDDYQNLASADYAK 609
>gi|261399278|dbj|BAI44849.1| fusicoccadiene synthase [Alternaria brassicicola]
Length = 697
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 67/204 (32%), Gaps = 8/204 (3%)
Query: 30 HMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
+ + + + + Y L K R + +V+ A +V AI +H SL+
Sbjct: 394 SLPPLSHKVISAPLTYVDSLPSKGTRDMFLDALNHWLHVDEQRASQVKMAIRMLHNASLM 453
Query: 89 HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
DD+ D +RR KP+ H + + L+ + ++I + +
Sbjct: 454 LDDVQ--DGSRLRRSKPSAHRVFGVAQTTNSAAFLVNESIKLIRELAGDQGVAAVLEKLT 511
Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
SL T+ KT AL A + + A+
Sbjct: 512 SLFVGQA-----QDLHSSRNLSPPSLTEYIQTIDQKTSALFELASRLMCLCSTATVVPNS 566
Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
L F LG FQ+ DD +
Sbjct: 567 SLSRFCILLGRFFQIRDDYQNLTS 590
>gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276]
gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276]
Length = 322
Score = 41.7 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 12/211 (5%)
Query: 28 ASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ L+ Y + GK+IRS L+ V+ + + + +H S
Sbjct: 12 DPKWSDSQENILMEPYVYISQNPGKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNAS 71
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDN 141
L+ DD+ DN +RRG P H Y I N + AF+ +
Sbjct: 72 LLMDDVE--DNSELRRGLPVAHTIYGVPQTINTANYVYFLAFQELLQLRSGVMGKGKDKE 129
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
+ + ++ +G E + + K G L+ A + +
Sbjct: 130 VDLVVAVNEELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKLMMAKSD 189
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
++ N + + + FQ+ DD ++ +
Sbjct: 190 SNVNYVPLV----NLISVWFQIRDDYMNLQS 216
>gi|197724595|emb|CAP07654.1| geranylgeranyldiphosphate synthase [Sphaceloma manihoticola]
Length = 307
Score = 41.7 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 22/212 (10%)
Query: 39 LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+ S + Y + L K R L+ + + ++G ++ +H SLI DD D
Sbjct: 13 VESPLSYVSSLPSKHFRVQLLEALNIWYELPQNEVSKIGDILQLLHNSSLILDDFQ--DR 70
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG+P H + E AI + + A + + ML +
Sbjct: 71 SPLRRGRPAAHALFGEAQAINSSSYGFIKAVALAQESFDLESTKAVTTAMLRSFEGQAAE 130
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
+ + + L A A+ ++ + L
Sbjct: 131 -----LHWTHTKTCPSVQEYLEMVNFSSL-LHLAPQLMQAKRGSATPVDQRSMVSLMRLL 184
Query: 218 GIIFQLADDLLDCEE-------------DLPK 236
G +Q+ DD ++ D K
Sbjct: 185 GQFYQIRDDYMNLTSAHYEKDKGFCEDLDEGK 216
>gi|47097726|ref|ZP_00235227.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 1/2a F6854]
gi|47013897|gb|EAL04929.1| heptaprenyl diphosphate synthase, component II [Listeria
monocytogenes str. 1/2a F6854]
Length = 116
Score = 41.7 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L + +Q++ ++ L L A+ + LL A GGK+IR V A L
Sbjct: 6 LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59
Query: 65 FNVNHLTALRVGAAIECIHCY 85
A++ + +
Sbjct: 60 AANADFNAVKNASVAIELIHM 80
>gi|308174861|ref|YP_003921566.1| isoprenyl transferase [Bacillus amyloliquefaciens DSM 7]
gi|307607725|emb|CBI44096.1| isoprenyl transferase (pre-ComX modification) [Bacillus
amyloliquefaciens DSM 7]
gi|328554814|gb|AEB25306.1| isoprenyl transferase (pre-ComX modification) [Bacillus
amyloliquefaciens TA208]
gi|328913174|gb|AEB64770.1| isoprenyl transferase (pre-ComX modification) [Bacillus
amyloliquefaciens LL3]
Length = 291
Score = 41.7 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+++ E + + K K+G+L + GA++A S + + +G+
Sbjct: 134 MQGQHNDLRNFPETEEECLHMIKQKSGSLTAMSAVLGAMLA--SGEFNATIENYSYKIGV 191
Query: 220 IFQLADDLLDCE----EDLPKK 237
I Q+ +D D+ KK
Sbjct: 192 IKQIENDYYGLFDKSRSDIKKK 213
>gi|241742424|ref|XP_002414173.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
gi|215508027|gb|EEC17481.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
putative [Ixodes scapularis]
Length = 397
Score = 41.7 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 16/189 (8%)
Query: 54 RSFLVTECASLFNVNHLTALRV---------------GAAIECIHCYSLIHDDLPSMDNG 98
R +V + + E IH LIH + ++ N
Sbjct: 110 RGLIVLLLSKAAGHPSCRQDCLEEERVAGITQRQRSLAEITEMIHTAHLIHRGVLNLSND 169
Query: 99 YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
+Q+ +++ G+ L+ A + ++ K ++ + + + G
Sbjct: 170 QFPDATTLRDLQFGNKISVLTGDYLIANASKSLTDLKNCKVVDLVATAIGDFMQSE-FLG 228
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
Q I + + TG+LM +C++ +A +E FG+++G
Sbjct: 229 DHDQQGNPIPVAGMTIGHWEEKHYLSTGSLMSNSCQATLELASHDDQLQELGFEFGKSIG 288
Query: 219 IIFQLADDL 227
+ +Q+ DL
Sbjct: 289 LAWQVHSDL 297
>gi|227543002|ref|ZP_03973051.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181224|gb|EEI62196.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 365
Score = 41.7 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA++A + LR +LG F++A+DL
Sbjct: 217 KTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDLRALTG 266
>gi|227488390|ref|ZP_03918706.1| hypothetical protein HMPREF0294_1540 [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091604|gb|EEI26916.1| hypothetical protein HMPREF0294_1540 [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 365
Score = 41.7 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ GA++A + LR +LG F++A+DL
Sbjct: 217 KTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDLRALTG 266
>gi|134057781|emb|CAK38176.1| unnamed protein product [Aspergillus niger]
Length = 434
Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
Q + + KTG L I + A L +G +
Sbjct: 260 DLHWKFQKTCPTTGEYLTMVDNKTGGLFRMTLRLLEIESKAEP--CPDLMQLITLMGRYY 317
Query: 222 QLADDLLDCEEDL 234
Q+ DD L+ D
Sbjct: 318 QIRDDYLNLTSDE 330
>gi|297735210|emb|CBI17572.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKI 53
+ + + + ++ LDD + + ++ ++RY+LL GGK+
Sbjct: 113 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRF 157
>gi|134082876|emb|CAK42706.1| unnamed protein product [Aspergillus niger]
Length = 619
Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 10/209 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
LDD + T + LL+ Y L K +R + + + +
Sbjct: 386 LDDREKERDRV--TLGTEHLLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSI 443
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +H SL+ DD+ + A I + + +L
Sbjct: 444 AKTLHNASLMLDDIEDGSPLRRGQPATHTVF-------GQALTINSANFVLIQAMDQVRL 496
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
++ R + G QDE E + + + KTG L
Sbjct: 497 LEDSRCLDIFVEETRNLFIGQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQ 556
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
A + +N L + +G FQ+ DD
Sbjct: 557 KATSKKNRCLPLEPLVDLMGEYFQIRDDY 585
>gi|327300343|ref|XP_003234864.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
gi|326462216|gb|EGD87669.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
118892]
Length = 382
Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 12/201 (5%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ +L Y + GK +R L+ V + + + +H SL+
Sbjct: 61 WTAGKENIVLGPYSYTVNQPGKDVRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLI 120
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ ++RRG P H + I + N + A + I K+ NI + +++
Sbjct: 121 DDVE--DSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMN 178
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
L G+ E + KTG L A + + +
Sbjct: 179 LHRGQGM-----DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDCVPL 233
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+ +G++FQ+ DD L+
Sbjct: 234 VD----LMGLMFQVCDDYLNL 250
>gi|242223537|ref|XP_002477380.1| predicted protein [Postia placenta Mad-698-R]
gi|220723093|gb|EED77422.1| predicted protein [Postia placenta Mad-698-R]
Length = 178
Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 16/64 (25%), Gaps = 6/64 (9%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAH------ASQNEKERLRCFGENLGIIFQLADDLL 228
++ M S + E R LG FQ+ DD L
Sbjct: 3 RHKLIVIYKTAFYSFYLPVALAMYMCGIQHGPAPSSDPYELARSILIPLGEYFQVQDDFL 62
Query: 229 DCEE 232
D
Sbjct: 63 DFAG 66
>gi|126650453|ref|ZP_01722676.1| ComQ [Bacillus sp. B14905]
gi|126592609|gb|EAZ86608.1| ComQ [Bacillus sp. B14905]
Length = 297
Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
D + L +I + KT + + + + GQ LD+ +
Sbjct: 86 DNSWSRTPELSLNVALAMLIMASKTIDETSFEHKRAAITILEECALKSISGQQLDLLNNC 145
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
DE + +K+G+L +C G ++A + + +G+ +GII Q+ +D+
Sbjct: 146 RDEDSYIHMITLKSGSLTAMSCLIGEVLAKG--EVSKEVEAYGKYIGIIQQIKNDI 199
>gi|32527731|gb|AAP86267.1| Ac2-125 [Rattus norvegicus]
Length = 879
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 65/242 (26%), Gaps = 18/242 (7%)
Query: 1 MNGGLP-----SKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
MNG + Q + I+ L H + R+ + Y +GGK R
Sbjct: 68 MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 127
Query: 55 SFLVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDL--PSMDNGYIRRGKPTVHI 109
V + +L+ + + MD+ + RRG+ +
Sbjct: 128 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSHTRRGQICWYQ 187
Query: 110 QYDEV-TAIIAGNGLLTYAFEIISSPKTQLKD-----NIRSQLMLSLTHNIGLQGMLGGQ 163
+ AI L + ++ + + Q L + Q
Sbjct: 188 KPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQ 247
Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQ 222
+ ++ +++ + MA + E +G FQ
Sbjct: 248 GQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQ 307
Query: 223 LA 224
+
Sbjct: 308 IQ 309
>gi|322696478|gb|EFY88270.1| farnesyl pyrophosphate synthetase 1 [Metarhizium acridum CQMa 102]
Length = 248
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
A+ ++ R F LG FQ+ DD +D D K
Sbjct: 112 ATPKNLQQTRDFSVALGEYFQVNDDYVDVFGDYATTGK 149
>gi|296809441|ref|XP_002845059.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
gi|238844542|gb|EEQ34204.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
113480]
Length = 319
Score = 41.0 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 11/182 (6%)
Query: 49 GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
GK IR ++ V + V + +H SL+ DD+ D+ ++RRG P H
Sbjct: 23 PGKDIRGQMIAAYNRWLQVPEESLAIVTKVVVMLHTASLLVDDVE--DSSHLRRGAPVAH 80
Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ I + N + A E I NI + +++L G+
Sbjct: 81 NIFGVPQTINSANYVYFLALEEIQKLNNPEAINIFIKELMNLHRGQGM-----DLYWRDT 135
Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
E + KTG L A + ++ + + +G++FQ+ DD L
Sbjct: 136 LTCPTEEDYLEMVGNKTGGLFRLAIKLMQTESNVPIDCVPLVD----LMGLMFQVCDDYL 191
Query: 229 DC 230
+
Sbjct: 192 NL 193
>gi|138895709|ref|YP_001126162.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
gi|196250964|ref|ZP_03149647.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267222|gb|ABO67417.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
gi|196209528|gb|EDY04304.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 310
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ +D+ + E + + K K+G+L+ AC G +A A +N + + ++GI
Sbjct: 146 NGQHMDVTYDIQTEAEYIEMVKKKSGSLVAMACFVGTALAGAEKNTV-IIEKYANDIGIA 204
Query: 221 FQLADDL 227
Q+ +D+
Sbjct: 205 AQIENDI 211
>gi|326498241|dbj|BAJ98548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
++G++FQ+ DD+LD E+L K
Sbjct: 75 RSIGLLFQVVDDILDVTKSSEELGK 99
>gi|330917321|ref|XP_003297764.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
gi|311329353|gb|EFQ94125.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
Length = 394
Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 11/196 (5%)
Query: 33 TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ + + Y GK+ R+ ++ ++ + + + +H SL+ DD
Sbjct: 99 PEKEKAIKNPFEYIASQPGKEFRTRVLEAFNEWLQISDESLKVIANVVRTLHTASLLIDD 158
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ D+ +RRG+P H Y I + N A + + + ++
Sbjct: 159 IQ--DSSVLRRGRPVAHRVYGVAQTINSANYHYFLALQELRKLDN----QTEALMIYETE 212
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
QG E + KT L A + + +
Sbjct: 213 MLRLHQGQGMELYWRDTSTCPTEDDYLEMVSNKTRGLFRLAIRLM----QSRSSSRMDCI 268
Query: 212 CFGENLGIIFQLADDL 227
+ LG+IFQ+ DD
Sbjct: 269 PLVQLLGLIFQIVDDY 284
>gi|297192087|ref|ZP_06909485.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197723242|gb|EDY67150.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 359
Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
I + K+ A A ++ A +R R FG GI++Q+ +D
Sbjct: 207 IYRGKSSAPFAMITAMAATLSGADAERVDRWREFGSVFGILWQIFND 253
>gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88]
Length = 693
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 64/220 (29%), Gaps = 5/220 (2%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
+ + D + + L I Y K IR ++ N A +V
Sbjct: 366 SRIVDSFEGPQTMTDDPYYKVLQQPINYLRSVPSKNIRGTIIQALNLWLNAPESVATQVE 425
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRG--KPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
I +H SL+ DD+ R + A A A + SS
Sbjct: 426 DLIGHLHDSSLLLDDIQDNSELRRGRPTAYRVFGVAQTINAATHALTQAFEKAPHMGSSV 485
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + + L+ G + ++KTGAL C A
Sbjct: 486 SSPARMVMVCLLIEVDELRNLHVGQAMDLHWTRSGYRPSIADYLEMNRLKTGALFCLASN 545
Query: 195 SGAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEE 232
I S ++ L +LG FQ DD ++
Sbjct: 546 LLYIQGSFSAEAIKQTDLSDLMISLGQYFQARDDYINLAS 585
>gi|296818997|ref|XP_002849789.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
gi|238840242|gb|EEQ29904.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
Length = 618
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 65/226 (28%), Gaps = 31/226 (13%)
Query: 25 LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
T + + +D +L+ +Y L K + L+ + + + +H
Sbjct: 320 PHTLNEIIKPSDDIVLAPYKYIASLPSKNTLAALIDALNLWLKIPQPILSTIKKIADMLH 379
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
+ DN +RRGKP+ H+ Y I + N + F +S+ I
Sbjct: 380 HALDDIE-----DNSKLRRGKPSTHLIYGAAQTINSANYVFVNTFAELSNLSNAAASAIY 434
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ + + M+ KTGAL + A
Sbjct: 435 IDEVQNSFCGQAS-----DLHWKYHSCCPTVEEYMMMIDNKTGALFRLCVRLMQAESAAP 489
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE-------------DLPK 236
F LG +Q+ DD + D K
Sbjct: 490 NK-------FVTLLGRYYQIRDDYQNLASKEYTKFKGFCEDLDEGK 528
>gi|115390482|ref|XP_001212746.1| predicted protein [Aspergillus terreus NIH2624]
gi|114195142|gb|EAU36842.1| predicted protein [Aspergillus terreus NIH2624]
Length = 773
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 48 LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
L KK R+ L+ V + R+ + +H SL+ DD+ D +RRG+P
Sbjct: 490 LPSKKNRNKLLDLLNDWLQVPPSSLKRIKNIVHMLHNSSLMLDDIE--DASALRRGQPAT 547
Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
H Y I + N + +A ++ D +R+ +G
Sbjct: 548 HTFYGISQTINSANYVYVHAVHEVTRLYNPDADELRNL----------HRGQSLDLYWRH 597
Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ++ KTG L + S+ L G +Q+ DD
Sbjct: 598 HARCPSMEEYIVMVDNKTGGLFRLMLRLMTAESSISRPLDTALCRLLTLTGRYYQIRDDY 657
Query: 228 L-----DCEE--------DLPK 236
L D E D K
Sbjct: 658 LNLASADYESKKGFCEDFDEGK 679
>gi|269929308|ref|YP_003321629.1| Geranylgeranyl pyrophosphate synthase-like protein [Sphaerobacter
thermophilus DSM 20745]
gi|269788665|gb|ACZ40807.1| Geranylgeranyl pyrophosphate synthase-like protein [Sphaerobacter
thermophilus DSM 20745]
Length = 300
Score = 40.6 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ F I + K G L AC GA+ + + FG +LG + QLA+D D
Sbjct: 165 NKAFEIARSKAGELGAVACRLGAMCGTENTELLDIYAEFGRHLGTMGQLANDAQDA 220
>gi|224124722|ref|XP_002329932.1| predicted protein [Populus trichocarpa]
gi|222871954|gb|EEF09085.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 40.6 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
MA + + ++ +G FQ+ DD LDC D
Sbjct: 1 MAGENLDNHVDVKNILVEMGTYFQVQDDCLDCFGDPE 37
>gi|89894981|ref|YP_518468.1| hypothetical protein DSY2235 [Desulfitobacterium hafniense Y51]
gi|219669383|ref|YP_002459818.1| hypothetical protein Dhaf_3364 [Desulfitobacterium hafniense DCB-2]
gi|89334429|dbj|BAE84024.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539643|gb|ACL21382.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 251
Score = 40.6 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 64/216 (29%), Gaps = 24/216 (11%)
Query: 5 LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
L +E + I L + A+ A +V +
Sbjct: 4 LSEHFKEELEEIKRTLRREIKLKAAEFDELVELNFGELENNAC-------PLIVLAVSQT 56
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
F +A+ + + I +H + + + + ++ G+ L
Sbjct: 57 FGGAARSAIGLATIFQYIFMADQVHRLMKDDPDLEESKRQ----------FPVLVGDFLY 106
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
F + K ++++ ++ ++ + + + + +M+
Sbjct: 107 GKFFLSLCKEKMLHFLAPLAKVIENMNQGAIIRWLSRDKKVSD-------GEYIRTIEME 159
Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+L A GA +A +E+ G NLGI
Sbjct: 160 RASLTGLAARLGAELAGCPLKVQEQCETIGWNLGIA 195
>gi|332523798|ref|ZP_08400050.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
gi|332315062|gb|EGJ28047.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
Length = 319
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 21/212 (9%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
ID+ + LLL+ + Q++D L ++ G + R L +L++ +
Sbjct: 19 EIDSRIKALLLE----LPKQYHDILQ------VVNGNRFRPLLTYYGYTLYSNELNETIY 68
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
A + + I D + R G PTVH QY A+I LL E++S
Sbjct: 69 HSATAIELIHKASIIIDDIIDQDEK-RHGLPTVHQQYSINEALIITVFLLGKCIELLS-- 125
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + M G + ++ + + +
Sbjct: 126 --------NIDDSTIRLFSQMISKMCQGTLSELNIDDNVTLSEVKYILDNQTSQVIQNSL 177
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
+ ++ + L G LG +FQL +D
Sbjct: 178 IIGMKSYDDSIYNQYLETIGYKLGYLFQLLND 209
>gi|238014738|gb|ACR38404.1| unknown [Zea mays]
Length = 119
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 217 LGIIFQLADDLLDCEEDLP 235
+G FQ+ DD LDC D
Sbjct: 1 MGTYFQVQDDYLDCFGDPE 19
>gi|284051047|ref|ZP_06381257.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
Length = 81
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 218 GIIFQLADDLLDCEE 232
G+ FQ+ DD+LD
Sbjct: 1 GLAFQIVDDILDITA 15
>gi|330796102|ref|XP_003286108.1| hypothetical protein DICPUDRAFT_150024 [Dictyostelium purpureum]
gi|325083927|gb|EGC37367.1| hypothetical protein DICPUDRAFT_150024 [Dictyostelium purpureum]
Length = 377
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 71/279 (25%), Gaps = 47/279 (16%)
Query: 2 NGGLPSKLQENSKRI----DTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
N + E K I+++ ++ +H+ L S I ++GGK IR
Sbjct: 4 NFNFEEERDEFIKLFPIIKQDIINEFPKMKLPNHIVDYITTFLNSPI---IIGGKMIRGL 60
Query: 57 -LVTECASLFNVNHLTAL-----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
+ +L + N I + + + + R
Sbjct: 61 GFIYSFNTLISKNKNNNYNDKEITISTSKHEARVIGWCLEFLSFFLVTDDIMDNGLTRRG 120
Query: 105 PTVHIQYDEVTA----------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
+ I + ++ F ++ + +
Sbjct: 121 EPCWYRNPSPFNPSEYKVGLLAINDSVLIESFLFFLLKKYFKHKSYYVDVLELFRECIFY 180
Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC-----ESGAIMAHA----SQN 205
G L Q F ++ + +++
Sbjct: 181 TATGQLLDTSSLHQKRGDFSNFNFENYSKICIYKSSYSMFYSQIKLAILLSGGKIIVDDE 240
Query: 206 -----EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
E+E +R LGI Q DD LDC + L K
Sbjct: 241 QEKTIEEELIRDISYELGIYGQTQDDYLDCYAEKEVLGK 279
>gi|183982574|ref|YP_001850865.1| polyprenyl synthetase IdsB [Mycobacterium marinum M]
gi|183175900|gb|ACC41010.1| polyprenyl synthetase IdsB [Mycobacterium marinum M]
Length = 328
Score = 40.2 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ KT AL+ C GA+ A A L FG LG+ FQ +DL
Sbjct: 188 YERMAAGKTAALIGCCCGLGALAADAGDATIAALERFGRELGLAFQCVNDL 238
>gi|119499223|ref|XP_001266369.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119414533|gb|EAW24472.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 545
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 6/202 (2%)
Query: 27 TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ N LL + Y L K +RS +V F + H V ++ +H
Sbjct: 232 EEASSVALGNSALLDPVHYIQSLPSKNMRSKVVDALNIWFQLPHHLVDTVKGTVDDLHNS 291
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
+LI DD+ D+ Y+RRG H + I + L+ A + Q
Sbjct: 292 TLILDDIQ--DSSYLRRGFAATHHVFGSAQCINSATYLVAQAASRLIVHNEQYPA---LI 346
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
G + + KTG + + +
Sbjct: 347 TFFLDGLKELALGQSWDLNWKSTGYCPSTEEYMAMVDGKTGVMFDMIIRMMHCFSSSQTV 406
Query: 206 EKERLRCFGENLGIIFQLADDL 227
L + LG +Q+ DD
Sbjct: 407 PVPELSQLTKLLGRWYQVRDDY 428
>gi|186704300|dbj|BAG30959.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
Length = 389
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 24/85 (28%), Gaps = 13/85 (15%)
Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
Q + + KTG L A + + +S L LG FQ+
Sbjct: 206 WTHQISTPSVEEYLQMVDGKTGGLFRMASKLMIAQSESSNMNPTDLDALMTLLGRYFQIR 265
Query: 225 DDLLDCEE-------------DLPK 236
DD ++ D K
Sbjct: 266 DDYMNLTSQEYTKSKGFCEDLDEGK 290
>gi|169829787|ref|YP_001699945.1| transcriptional regulator of comG and srfA [Lysinibacillus
sphaericus C3-41]
gi|168994275|gb|ACA41815.1| transcriptional regulator of comG and srfA [Lysinibacillus
sphaericus C3-41]
Length = 297
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
D + L +I + KT + + + + GQ LD+ +
Sbjct: 86 DNSWSRTPELSLNVALAMLIMASKTIDETSFEHKRAAIKILEECALKSISGQQLDLLNNC 145
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
DE + +K+G+L +C G ++A + + +G+ +GII Q+ +D+
Sbjct: 146 RDEDSYVQMITLKSGSLTAMSCLIGEVLAKG--EVSQEVEAYGKYIGIIQQIKNDI 199
>gi|145609315|ref|XP_367595.2| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
gi|145016701|gb|EDK01131.1| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
Length = 725
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE-- 215
+ GQ D+ F A M AS + L G
Sbjct: 531 QLHLGQSHDLAWTFHCRAPSMAGYYSHLEQKTGGLFRLAARMMRASATQNRHLDACGLMS 590
Query: 216 NLGIIFQLADDLLDCEEDL 234
LG ++QL DD D +
Sbjct: 591 LLGRLYQLRDDYQDITSET 609
>gi|149238027|ref|XP_001524890.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451487|gb|EDK45743.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 347
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
+ H + L + + K KTG L A + +
Sbjct: 137 WEIVMPEMKNFHKGQGLDIYWRDNLPDLESLPSVVDYCQMAKDKTGGLFRLAVRLLRLFS 196
Query: 201 HA----SQNEKERLRCFGENLGIIFQLADDLLDC 230
LG+I+Q+ DD L+
Sbjct: 197 SGSTHLDSEYNGVFESIANCLGVIYQIRDDYLNI 230
>gi|315047945|ref|XP_003173347.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
118893]
gi|311341314|gb|EFR00517.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
118893]
Length = 368
Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 12/204 (5%)
Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ + +L Y + GK IR L+ V + + + +H S
Sbjct: 50 EAMWTETKENIVLGPYSYMVNQPGKDIRGQLIAAYNRWLQVPEESLTVITKVVVMLHTAS 109
Query: 87 LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
L+ DD+ D+ ++RRG P H + I + N + ++ + Q N +
Sbjct: 110 LLIDDVE--DSSHLRRGAPVAHNIFGIPQTINSANYVY-----FLALEEIQKLKNPEAIN 162
Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
+ +G E + KTG L A + + +
Sbjct: 163 IFVNELMNLHRGQGLDLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDC 222
Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
+ +G++FQ+ DD L+
Sbjct: 223 VPLVD----LMGLMFQVCDDYLNL 242
>gi|317029196|ref|XP_001391030.2| hypothetical protein ANI_1_558054 [Aspergillus niger CBS 513.88]
Length = 619
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 16/216 (7%)
Query: 25 LQTASHMQTQHNDRLLSAIRYA-LLGGKK-----IRSFLVTECASLFNVNHLTALRVGAA 78
+ + + L + YA + GKK +R+ V ++ ++ +
Sbjct: 308 EERSHLVGPPGESIALQPLEYAESVPGKKYWSEFLRAMNVWLRLPAQSIKYMDTI----- 362
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
H + D +RRG+P HI Y E + + A + +S +
Sbjct: 363 --FAHLCASSVMLDDIQDGSDLRRGQPATHILYGESQTTNSALYGIVKALSLAASTDGKH 420
Query: 139 KDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
+ + + + ++G + + KTG+ A
Sbjct: 421 SQILLGGDFVSEKSLSDSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFRCALRL-- 478
Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ A A L LG FQ+ +D + +D
Sbjct: 479 LEAEAGTKAIPELHHLVTLLGRYFQVYNDYRNLSDD 514
>gi|307211217|gb|EFN87417.1| Geranylgeranyl pyrophosphate synthetase [Harpegnathos saltator]
Length = 324
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 12/195 (6%)
Query: 34 QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
+ + +LL + Y L GK R+ L + + + + +H S+I DD+
Sbjct: 22 EEDRKLLEPMSYMLRTPGKAYRTTLAKAVNYWLRIPNDKLEDIIEIVNILHTSSIILDDI 81
Query: 93 PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
DN +RRG P H Y A N + II+ +T + + + +
Sbjct: 82 E--DNAVLRRGIPVAHSVYGIAHTTNAANYGM-----IIALERTLALQHPDAVKVFTEQL 134
Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
+G E + + KTG L + +N
Sbjct: 135 LELHRGQGSDIYWRDNHICPTELEYKITVVRKTGGLFKLLVRLMQLFTKFEENVAP---- 190
Query: 213 FGENLGIIFQLADDL 227
+ LG +FQ+ DD
Sbjct: 191 LADMLGYLFQIRDDY 205
>gi|242212676|ref|XP_002472170.1| predicted protein [Postia placenta Mad-698-R]
gi|220728728|gb|EED82616.1| predicted protein [Postia placenta Mad-698-R]
Length = 328
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 64/218 (29%), Gaps = 7/218 (3%)
Query: 24 LLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
+L ++ ++ LL + + GK+IR ++ + V + + I +
Sbjct: 12 ILSESAAWSERNEMALLEPFNHINSVRGKEIRGLMLEAFNAWLEVPKDKLMIISRVISML 71
Query: 83 HCYSLIHDDLPSMDN----GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
H SL+ DD+ + + +
Sbjct: 72 HTASLLIDDIEDDAQLRRGVPASHKIYGIPQTINSANYAYFLAYQELFTLRSGVDSGDSE 131
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
+ L L + GQ L++ T+ + + F
Sbjct: 132 PHRLIPFRQLDRVVTAELLSLHRGQGLELLWRDSLQCPTEEEYVAMVNNKTGGLFRVAIK 191
Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+MA +++N G+ +Q+ DD ++ +
Sbjct: 192 LMMACSTKNIDVDYVPLVNLFGVYYQIRDDYMNLQSSE 229
>gi|255732615|ref|XP_002551231.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404]
gi|240131517|gb|EER31077.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404]
Length = 191
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ L ++ + + K KTG+L A + ++ A N+ L LG
Sbjct: 12 IYWRDYLKKLEKLPEIEDYLGMVKDKTGSLFRLAIKLLSLHAGVGDND--ELVAIANLLG 69
Query: 219 IIFQLADDLLDC 230
II+Q+ DD L+
Sbjct: 70 IIYQVRDDYLNL 81
>gi|271966483|ref|YP_003340679.1| dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum
DSM 43021]
gi|270509658|gb|ACZ87936.1| Dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum
DSM 43021]
Length = 671
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIF 221
F GA + AS LR FG + G F
Sbjct: 534 EFPSRIGAQLGGASPETVRALRDFGNHSGHAF 565
>gi|260575019|ref|ZP_05843020.1| polyprenyl synthetase [Rhodobacter sp. SW2]
gi|259022641|gb|EEW25936.1| polyprenyl synthetase [Rhodobacter sp. SW2]
Length = 148
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 198 IMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ A ++ +R GI FQ+ DD+L+ +
Sbjct: 1 MAAGVTEPRLLDRFNEAFRLTGIAFQIQDDILNLIGETE 39
>gi|300766617|ref|ZP_07076534.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300495717|gb|EFK30868.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 119
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 217 LGIIFQLADDLLDCEEDLP 235
+G+ +Q+ DD+LD D
Sbjct: 1 MGLAYQMLDDVLDYAGDEA 19
>gi|77998089|gb|ABB16424.1| ComQ [Bacillus mojavensis]
gi|79085236|gb|ABB51999.1| ComQ [Bacillus mojavensis]
Length = 280
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+ + E + + K K+G+L + GA++A+ NE + + +GI
Sbjct: 123 MQGQHNDLANFPETEDECLQMIKQKSGSLTAMSAVLGAMLANGEFNEV--IENYSYKIGI 180
Query: 220 IFQLADDLLDCE----EDLPKK 237
+ Q+ +D D+ K+
Sbjct: 181 VKQIENDYYGLFNKNRSDIRKR 202
>gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens]
Length = 1365
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 16/230 (6%)
Query: 7 SKLQENSKRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKK---IRSFLVTEC 61
L+ +RI +++ L + L A R ++ R +V
Sbjct: 1010 EDLKNMKQRIKALVERSLDGGGGSSSKSGGSHPLLQEAAREFFE--RRERAFRPAVVLLV 1067
Query: 62 ASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
A + +E + ++HD + D +
Sbjct: 1068 ARAVEGTASGTTLPEKQCLLAEIVEMMCTAQVVHDSVLEDDEAGSTGNVAHRTYSQNAGN 1127
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
+ G A ++ + + + G + L D +D
Sbjct: 1128 KVSVLAGDFLLARCSVALSELGDLAVVELMATALESMVQGG-VLKAQAGLGGLDGLLDWD 1186
Query: 176 QVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQL 223
++KT +L+ AC S AI+ A E + + NLG+ +Q+
Sbjct: 1187 AYVARVELKTSSLIADACRSAAILGGEAADGAVAEAVYAYASNLGVAYQI 1236
>gi|238498722|ref|XP_002380596.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
gi|220693870|gb|EED50215.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
NRRL3357]
Length = 271
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 36/134 (26%), Gaps = 2/134 (1%)
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
+ I + A ++ + + + DN R + G
Sbjct: 33 EDSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMDQVRQLDNQRCMDVFVEEMRNLFIGQ 92
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
Q E + + + KTG L A N L LG
Sbjct: 93 SFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQ 152
Query: 220 IFQLADDLLDCEED 233
FQ+ DD + ED
Sbjct: 153 YFQIRDDYKNLTED 166
>gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
Length = 127
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 8 KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
+ E K D + + + + + + Y + GG K+IR + A
Sbjct: 8 SIDEIQKLADPDMQKVNQNILAQLNSDVP-LIGQLGFYIVQGGGKRIRPLIAVLAARSLG 66
Query: 67 VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
++ +E IH SL+HDD+ +D +RRG+ T + ++ +++ G+ + T
Sbjct: 67 FEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTR 124
Query: 127 AFE 129
AF+
Sbjct: 125 AFQ 127
>gi|118618553|ref|YP_906885.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99]
gi|118570663|gb|ABL05414.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99]
Length = 328
Score = 39.8 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ KT AL+ C GA+ A A L FG LG+ FQ +DL
Sbjct: 188 YERMAAGKTAALIGCCCGLGALAADAGDATITALERFGRELGLAFQCVNDL 238
>gi|304408348|ref|ZP_07389995.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304342637|gb|EFM08484.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 310
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 17/185 (9%)
Query: 51 KKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
K+I S L +FN + AA+E + I DDL D +
Sbjct: 37 KRIHSSFLFGKLTLLHYMMFNGTSPEIYKAAAAVELMILSLDIFDDLQDQDQPQSIWSQC 96
Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
+ + + + L ++ + + ++ +Q++ ++ GQ
Sbjct: 97 EPAVAMNVAIGFLMLSAKLIEQIDLPAGNRDRMIACFNTQVLKAV----------NGQFS 146
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
D+ + E + + + K+GAL+ AC G + A + + + +G+++GI Q+ +
Sbjct: 147 DLNNAIYSEEEYKEMTRQKSGALVACACLVGTLAA--TDQHADLVLQYGQHIGIAAQIKN 204
Query: 226 DLLDC 230
D D
Sbjct: 205 DHNDI 209
>gi|254262158|emb|CAZ90487.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
turicensis]
Length = 224
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 11/172 (6%)
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ A+E +H SLI DD+P MDN +RRG+PT+H QY E AI+A LL+ AF ++ +
Sbjct: 1 MACAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAA 60
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGALMCFA 192
+ RSQ + L+ +G QG++ GQ D+++ + + ++KT L
Sbjct: 61 QGL-SPECRSQAVAELSMAVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGAT 119
Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------LDCEEDLPK 236
+ A+ A AS ++++RCF ++LG FQL DDL D +D K
Sbjct: 120 LQIAALAAGASPAARQKMRCFAQDLGQAFQLLDDLADGHAGTGKDINKDAGK 171
>gi|13383245|dbj|BAB39473.1| putative GGPP synthase 2 [Metaplexis japonica]
Length = 128
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 19/50 (38%)
Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
D + + + GAI+ A+ + +LR F +G++
Sbjct: 79 MSDWNILSSYICTRQQLYWRGSVVLGAILGGANDVQISKLRKFARCIGLL 128
>gi|68489506|ref|XP_711426.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
gi|46432727|gb|EAK92197.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
gi|238882748|gb|EEQ46386.1| hypothetical protein CAWG_04735 [Candida albicans WO-1]
Length = 332
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ L ++ D + + K KTG L A + ++ + +N+ +L +G
Sbjct: 153 IYWRDYLKKLEKLPDVEEYLEMIKDKTGGLFRLAIKLLSLYSDVKEND--QLISLANLMG 210
Query: 219 IIFQLADDLLDC 230
I++Q+ DD L+
Sbjct: 211 ILYQVRDDYLNL 222
>gi|145611940|ref|XP_369218.2| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15]
gi|145616406|ref|XP_001403072.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15]
gi|145010176|gb|EDJ94832.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15]
gi|145019146|gb|EDK03425.1| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15]
Length = 372
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
+ Q ++G + + + +M G IM S
Sbjct: 173 IHRASEQGNAQAAQEVVGQSLDLLWTFEVSTPTFEEYMQMVDGKTGALFVMIYRIMVAVS 232
Query: 204 QNE--KERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
+ L F LG FQ+ DD + D K
Sbjct: 233 PGQTVLPALERFTLLLGRYFQIRDDYANLASPDYSK 268
>gi|58699201|ref|ZP_00374011.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534279|gb|EAL58468.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 69
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
L+++ + ++L+SA+RY LL K IRSFLV + +FN + V
Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVA 64
>gi|330901422|gb|EGH32841.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 56
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
+ ++ +D I+ L + D + SA GGK++R LV C
Sbjct: 5 AFYRAVADDFSAVDLIIKKQLTSRVPLVSKIG-DYITSA------GGKRLRPLLVLLCG 56
>gi|145251934|ref|XP_001397480.1| geranyltranstransferase [Aspergillus niger CBS 513.88]
gi|134083021|emb|CAK42784.1| unnamed protein product [Aspergillus niger]
Length = 349
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 71/239 (29%), Gaps = 22/239 (9%)
Query: 12 NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------ALLGGKKIRSF------LV 58
+ + D +L +L+ H + + Y GK +R L
Sbjct: 6 DRSKFDGVLAELVADVLEHFASNGAPQ--EVKNYVEKCFYENSTNGKMLRGLSVPQTGLS 63
Query: 59 TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
+ + +G +E + Y L HDD+ MDN RRGKP + +
Sbjct: 64 ILGRPVTEQEYHDLCVLGWLVELLQAYLLTHDDI--MDNSSTRRGKPCWYRLPSVGMKAV 121
Query: 119 AGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
LL + + Q Q G E
Sbjct: 122 NDGSLLRSSIFFLLKQHFQTHPAYLRIMETFHEVSFLCEIGQECDGIASEQRSIENWTMA 181
Query: 176 QVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ I +K G + S A+ + + ++++ LG +Q +D LD
Sbjct: 182 EYEKICNLKAGYYTFYLSVSIALQYLQLDTPLNVQQIQDILIPLGSFYQSQNDYLDIFG 240
>gi|212530618|ref|XP_002145466.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
gi|210074864|gb|EEA28951.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
marneffei ATCC 18224]
Length = 297
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 27 TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
+ + +LS +Y L KK+R + + F+V + I+ +H
Sbjct: 92 LDVQLPELPDKVILSPSQYVKSLPSKKVRHHAIDALSIWFDVPEAELSVMKDTIDTLHNS 151
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ V I+ +I+ Q ++
Sbjct: 152 SLMLDDIEDDSPLRRGFPSTHVVF-------GISQTINAANYLYVIALEMAQKLNSPACL 204
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+ G + + + KTG L + A+ + +
Sbjct: 205 NVFIEELKRLHIGQSLDLYWTANVQCPSLEEYLKMVDHKTGGLFQMVAKLTALRSPVVRR 264
Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDL 234
+ L G FQ+ DD + D
Sbjct: 265 VPDLL-NMTTLFGRYFQIRDDYQNLMSDE 292
>gi|311261497|gb|ADP88695.1| farnesyl diphosphate synthase [Betula platyphylla]
Length = 190
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 8/178 (4%)
Query: 56 FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
L+ E L N A +G IE + Y L+ DD+ MDN RRG+P + Q
Sbjct: 12 KLLKEGKELTNDEVFLACALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWYRQPKVGL 69
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A G L + I+ Q + + + G + + ++ E
Sbjct: 70 IAANDGIILRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLS 129
Query: 175 TQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ + +MA + ++ +GI FQ+ DD+
Sbjct: 130 KYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLENHVNVKDTLIEMGIYFQVQDDI 187
>gi|317157517|ref|XP_003190849.1| hypothetical protein AOR_1_1636054 [Aspergillus oryzae RIB40]
Length = 160
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 180 IQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEEDL--P 235
+ KT A A S +K L F LG +Q+ DD + D
Sbjct: 1 MIDNKTAGFFRLVLRMMAAEASVSMSLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAA 60
Query: 236 KK 237
KK
Sbjct: 61 KK 62
>gi|215447707|ref|ZP_03434459.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85]
gi|294995846|ref|ZP_06801537.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 210]
Length = 193
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 74/193 (38%), Gaps = 8/193 (4%)
Query: 20 LDDLLLQTASHMQTQHNDRL--LSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRV 75
L + + T L +A R G GK R+ LV A+ + A V
Sbjct: 2 LHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPV 61
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
AA+E +H ++L+HDD+ MD RRG+PTV + AI+ G+ L A I++
Sbjct: 62 SAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGLT 119
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
+ + + L L + + KT AL C
Sbjct: 120 DECVAVRAIR--RLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCAL 177
Query: 196 GAIMAHASQNEKE 208
GA++A+A E
Sbjct: 178 GALVANADDATIE 190
>gi|171185989|ref|YP_001794908.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
gi|170935201|gb|ACB40462.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
Length = 263
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 63/215 (29%), Gaps = 15/215 (6%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
+ L+ + + L A+RY + R L L
Sbjct: 7 EVLAALERVKTHLQNVGSDIRPQSLREAVRYYIE-----RP------GKLLRPLLLLTFS 55
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
+ +I + + V ++DE L I++
Sbjct: 56 YTLDRRSVLDLRIIQAAAIVELLHVVSLLQDDVMDKHDERRGAKTPRALYGDGRSIVA-- 113
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
+ + L L +I Q L I + + + KT L+ +
Sbjct: 114 -SDWLIAESIKRALQLGPDIVKYLADVAQRLSIGQALDLDGRYDEAAEFKTAPLIEASLV 172
Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
A++ + + + G+ LG+++Q ADD D
Sbjct: 173 LPAMLLGR-REILDSAKKLGQLLGVLYQYADDYSD 206
>gi|67902312|ref|XP_681412.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
gi|40739975|gb|EAA59165.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
gi|259480909|tpe|CBF73971.1| TPA: geranylgeranyl pyrophosphate synthetase AtmG, putative
(AFU_orthologue; AFUA_8G02400) [Aspergillus nidulans
FGSC A4]
Length = 355
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 24/204 (11%)
Query: 32 QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
+ + + + + + Y + L GK IR L++ F + + A+ +H SL+ D
Sbjct: 63 KGKEEEIISAPVHYISTLPGKDIRGKLISAFNEWFQIPDEQLEIIKRAVGLLHVASLLID 122
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ + A E++ + + I ++ +L L
Sbjct: 123 DIEDYSKLRRGFPVAHSIFGIPQTINS-ANYAYFQAQNEVLKLRRCEKALRIFTEELLRL 181
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G+ E + + KTG L A + + + +
Sbjct: 182 HRGQGM-----DLYWRDSLTCPSEEEYLDMVANKTGGLFRLAIKLIQLESDVDE------ 230
Query: 211 RCFGENLGIIFQLADDLLDCEEDL 234
F + DD + + D
Sbjct: 231 ----------F-IRDDYQNLQSDQ 243
>gi|184201774|ref|YP_001855981.1| hypothetical protein KRH_21280 [Kocuria rhizophila DC2201]
gi|183582004|dbj|BAG30475.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 411
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+GA++ A L G LG+
Sbjct: 260 PCYEAPLRAGAVLGGAPTAHVNALADTGRALGMA 293
>gi|213404660|ref|XP_002173102.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
japonicus yFS275]
gi|212001149|gb|EEB06809.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
japonicus yFS275]
Length = 286
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 13/170 (7%)
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
LV + ++ + S I + + + + + +
Sbjct: 84 PLLVLLMSRASTLDAT---PSKQQYQRYKQLSRITELIHAANAIHKSVQEHAKEAHSITK 140
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
++ G+ LL A ++S K + + + ++ G +D E
Sbjct: 141 LKVLVGDYLLGKASVDLASLKDNSITELMA---------SAIANLIEGNFPQTRDTMSIE 191
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
++ + ++++ L AC +I+ AS++ + +G +LG QL
Sbjct: 192 SERRRL-RLQSAFLPAKACLCASILNRASEHISQACFEYGLHLGTAMQLR 240
>gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase
Length = 343
Score = 39.1 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 67/200 (33%), Gaps = 12/200 (6%)
Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
H + + Y GK++R+ L+ V + +G + +H SL
Sbjct: 46 DHWTSTKEKVVTGPYDYIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASL 105
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ DN +RRGKP + I + N + ++ K N +
Sbjct: 106 LIDDIQ--DNSELRRGKPVAQNIFGTALTINSANYVY-----FLALEKLNSLKNPNITDI 158
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ +G E + F + KTG L A +
Sbjct: 159 FTEELLRLHRGQAMDLYWRDTLTCPTEEEYFEMVANKTGGLFRLMYRMM----KAESSMP 214
Query: 208 ERLRCFGENLGIIFQLADDL 227
L E LG+IFQ+ DD
Sbjct: 215 IDLLPVVELLGVIFQVVDDY 234
>gi|255945615|ref|XP_002563575.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588310|emb|CAP86415.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 732
Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 73/203 (35%), Gaps = 9/203 (4%)
Query: 32 QTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
QTQ +L+ Y L K +R L+ S + V + L + A+ +H SL+ D
Sbjct: 382 QTQQQRPVLNPYTYINSLPSKNVRQTLIAALNSWYKVPVKSLLIIEGAVNFLHNSSLLLD 441
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
D+ D ++RRG+P H + I L+ A +I L + S
Sbjct: 442 DIQ--DGSFLRRGRPVAHQIFGVGQTINTATYLMNEALYLIQ----MLSPSAVSVYTEID 495
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
G Q + KTG L + + A++N +
Sbjct: 496 EMRNLQLGQGRDLYWSYHTHVPTPAQYISMVDGKTGGLFRLISRL--MRSEATKNSDLDI 553
Query: 211 RCFGENLGIIFQLADDLLDCEED 233
F LG FQ+ DD + + +
Sbjct: 554 SQFATLLGRHFQIRDDYQNLQSE 576
>gi|302661975|ref|XP_003022648.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
[Trichophyton verrucosum HKI 0517]
gi|291186605|gb|EFE42030.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
[Trichophyton verrucosum HKI 0517]
Length = 388
Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 14/208 (6%)
Query: 28 ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
+ + +L Y + GK IR L+ V + +E
Sbjct: 58 EAMWTAGKENIVLGPYSYTVNQPGKDIRGQLIAAYNRWLQVPEESLASAVGKLEQNEATL 117
Query: 87 LIHDDLPSMDN----GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
+ PS+D+ ++RRG P H + I + N + A + I K+ NI
Sbjct: 118 FANILPPSIDDVEDSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINI 177
Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
+ +++L G+ E + KTG L A + +
Sbjct: 178 FVKELMNLHRGQGM-----DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSV 232
Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + +G++FQ+ DD L+
Sbjct: 233 PIDCVPLVD----LMGLMFQVCDDYLNL 256
>gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus
fumigatus]
gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163]
Length = 387
Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 69/205 (33%), Gaps = 12/205 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
++ L+ Y GK IR L+T V + + + +H
Sbjct: 66 RDGKWSQEYEKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTA 125
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ DN +RRG P H + I + N + A + + +I Q
Sbjct: 126 SLLVDDVE--DNSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQ 183
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L+L G+ E + KTG L A + A
Sbjct: 184 ELLNLHRGQGM-----DLFWRDTLTCPTEEDYLDMVGNKTGGLFRLAIKLM----QAEST 234
Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 235 TGIDCVSLVNVMGLIFQICDDYLNL 259
>gi|190348241|gb|EDK40664.2| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
6260]
Length = 329
Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKK--IRSFLVTECASLFNVNHLTALRVGAA 78
+L+ D + Y G IR+ + L+ +
Sbjct: 2 ELIDTLIYSQPQMIPDAIRLPYDYLAAIPGTNGDIRTQFIKSFNDLYFTIDNHDTIATIS 61
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ D RRG P H +Y + + GN + A + Q
Sbjct: 62 EVITVFHNSSLLIDDIEDGSEFRRGLPAAHTKYGVASTLNCGNLMYFVALQTAQQKLPQY 121
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----------QVFMIQKMKTGAL 188
+ + NI ++ +L D + + + KTG L
Sbjct: 122 HPSDNKNDIALSISNILVEELLNLHHGQGLDIHWRDHLKTTKLPSIEEYMEMIMNKTGGL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A + + + ++ + GI+FQ+ DDL++ +D
Sbjct: 182 FRLAVKLLGAFS--TPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224
>gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae]
Length = 343
Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 67/200 (33%), Gaps = 12/200 (6%)
Query: 29 SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
H + + Y GK++R+ L+ V + +G + +H SL
Sbjct: 46 DHWTSTKEKVVTGPYDYIAAKPGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASL 105
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ DN +RRGKP + I + N + ++ K N +
Sbjct: 106 LIDDIQ--DNSELRRGKPVAQNIFGTALTINSANYVY-----FLALEKLNSLKNPNITDI 158
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+ +G E + F + TG L +A +
Sbjct: 159 FTEELLRLHRGQAMDLYWRDTLTCPTEEEYFEMVANMTGGLFWLMYRMM----NAESSMP 214
Query: 208 ERLRCFGENLGIIFQLADDL 227
L E LG+IFQ+ DD
Sbjct: 215 IDLLPVVELLGVIFQVLDDY 234
>gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
Length = 164
Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 15 RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
I+ L+++ S M H + Y GK +R+ L A + +
Sbjct: 11 EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70
Query: 75 VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
AA + + + +D RRG H Q+ AI G+ LL Y+ +
Sbjct: 71 YFAAHLEVLHLATLI-HDDVIDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRL 125
>gi|77998092|gb|ABB16426.1| ComQ [Bacillus subtilis subsp. spizizenii str. W23]
Length = 279
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+++ E + + K K+G+L + A++A+ N+ + + +GI
Sbjct: 123 MQGQHDDLRNSPETEEECIQMMKQKSGSLTAMSAVLAAMLANGQFNQI--IEDYAYKIGI 180
Query: 220 IFQLADDLL----DCEEDLPKK 237
I QL +D D D+ KK
Sbjct: 181 IKQLENDYFGLVNDQRSDIRKK 202
>gi|289811565|ref|ZP_06542194.1| hypothetical protein Salmonellaentericaenterica_47552 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 77
Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 8/84 (9%)
Query: 1 MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
MN + ++ ++ + + L + + GGK+IR +
Sbjct: 1 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISG-------GGKRIRPMIAV 53
Query: 60 ECASLFNVNHLTALRVGAAIECIH 83
A + + A IE IH
Sbjct: 54 LAARAVGYQGNAHVTIAALIEFIH 77
>gi|154687280|ref|YP_001422441.1| ComQ [Bacillus amyloliquefaciens FZB42]
gi|126362993|emb|CAM35811.1| competence protein ComQ [Bacillus amyloliquefaciens FZB42]
gi|154353131|gb|ABS75210.1| ComQ [Bacillus amyloliquefaciens FZB42]
Length = 286
Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ +D+ D + E Q + K K+GAL A GA++A ++ + + + +G+
Sbjct: 114 MEGQHIDLVDNTLTENQCIEMIKKKSGALTALASMLGAVLA--TKRYQSDVEQYAFYIGV 171
Query: 220 IFQLADDL 227
QL +DL
Sbjct: 172 AAQLKNDL 179
>gi|241955823|ref|XP_002420632.1| geranylgeranyl diphosphate synthase, putative; geranylgeranyl
pyrophosphate synthetase, putative; [includes:
dimethylallyltranstransferase (ec 2.5.1.1)
geranyltranstransferase (ec 2.5.1.10);
farnesyltranstransferas (ec 2.5.1.29)] [Candida
dubliniensis CD36]
gi|223643974|emb|CAX41714.1| geranylgeranyl diphosphate synthase, putative [Candida dubliniensis
CD36]
Length = 332
Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ L ++ D + + K KTG L A + ++ + +N+ +L +G
Sbjct: 153 IYWRDYLKKLEKLPDVEEYLEMIKDKTGGLFRLAIKLLSLYSDIKEND--QLISLANLMG 210
Query: 219 IIFQLADDLLDC 230
I++Q+ DD L+
Sbjct: 211 ILYQVRDDYLNL 222
>gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger]
Length = 401
Score = 38.7 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 69/218 (31%), Gaps = 10/218 (4%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
+ + D + + L I Y K IR ++ N A +V
Sbjct: 83 SRIVDSFEGPQTMTDDPYYKVLQQPINYLRSVPSKNIRGTIIQALNLWLNAPESVATQVE 142
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
I +H SL+ DD+ DN +RRG+PT + + I A LT + K
Sbjct: 143 DLIGHLHDSSLLLDDIQ--DNSELRRGRPTAYRVFGVAQTINAATHALTQ-----AFEKV 195
Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
+ G + ++KTGAL C A
Sbjct: 196 VPLMKPGTSHGFFDELRNLHVGQAMDLHWTRSGYRPSIADYLEMNRLKTGALFCLASNLL 255
Query: 197 AIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEE 232
I S ++ L +LG FQ DD ++
Sbjct: 256 YIQGSFSAEAIKQTDLSDLMISLGQYFQARDDYINLAS 293
>gi|170027728|ref|XP_001841749.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
gi|167862319|gb|EDS25702.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
Length = 297
Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 4/177 (2%)
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E L N+ L + CY+ + D +DN R GKP H + D + +
Sbjct: 74 ETMKLDNIEKALYLDWCSKTVWFLCYAHVIFD-DIVDNSKTRYGKPCWHRRSDVGLSAVF 132
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
L+ + + + K L Q ++ E
Sbjct: 133 DGLLIDKSIHYLMNTKFNRDIIDAVLEKL--FFLDAGQTLIDTLSKVGDFENYSRASYEQ 190
Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ + ++ G +A + N ++++ + +++Q+ +D D D
Sbjct: 191 VANLLDSCIITLPIRMGMNLAGITDLNAVDKMQTITSKMQVLYQMMNDYQDLFGDAG 247
>gi|324513413|gb|ADY45511.1| Geranylgeranyl pyrophosphate synthase [Ascaris suum]
Length = 307
Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 12/199 (6%)
Query: 33 TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ L++ Y + + GK +RS L T +N + +E +H SL+ DD
Sbjct: 2 DEDEAYLMAPFVYISKVPGKHVRSRLATAFNLWLKINDNPLELIMCTVEMLHNASLLIDD 61
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ D+ +RRG P H Y I GN + A I + ML L
Sbjct: 62 IE--DSSILRRGIPVAHSVYGVARTINTGNYVYFVALSKCLQLAKPKAIEIFCEKMLELH 119
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G + + E+Q + KTG L + + +
Sbjct: 120 RGQGKE-----LYWRDTMQCPTESQYEEMVIEKTGGLFSLTVRLMELFS----VHQYNFT 170
Query: 212 CFGENLGIIFQLADDLLDC 230
NL + Q+ DD ++
Sbjct: 171 PLINNLALYCQIRDDYINL 189
>gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
Length = 715
Score = 38.3 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 18/209 (8%)
Query: 25 LQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
++ + + D L + RY L GK IR + + V A V A+ +H
Sbjct: 407 MEVVQDVPSLGTDVLEAPSRYIDSLPGKGIRHKAIDALNVWYRVPPQQAAIVSKAVHLLH 466
Query: 84 CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
SL+ DD+ D+ +RRGKP H+ + + I + A E +++ K + ++
Sbjct: 467 GASLMLDDIE--DSSRLRRGKPAAHLVFGTMQTINSAGFRFLNALEELTNSKLEELQDLY 524
Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
L L T+ + + A A +
Sbjct: 525 VGQSYDLAWTCNLSCP---------------TEEEYLAMVDGSLFRMLARMLDAQSDSPT 569
Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + + F LG FQ+ DD ++
Sbjct: 570 KPDVVLITRFMTLLGRFFQIRDDYMNLTS 598
>gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
AX4]
gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranylgeranyl diphosphate synthase; AltName:
Full=Geranyltranstransferase
gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
AX4]
Length = 303
Score = 38.3 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 61/205 (29%), Gaps = 12/205 (5%)
Query: 29 SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
S+ + + +L+ Y GK R+ L+ V + I+ +H SL
Sbjct: 9 SYPLDKSDFKLIEPYTYICESSGKGFRNALIKSFDYWLKVGDEKVQDISKVIQGLHGASL 68
Query: 88 IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
+ DD+ + + + + ++ +
Sbjct: 69 LIDDIEDNSKLRRGKPVAHSIYGIP-------QTINSANFVYFLIMDQCNKLGDPKATTI 121
Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
+G + E + + KTG L + + N
Sbjct: 122 FIEELIRLHRGQGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTNYI 181
Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
+ + E+LG+ +Q+ DDL++
Sbjct: 182 DLV----EDLGMYYQIRDDLINLVS 202
>gi|146413673|ref|XP_001482807.1| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
6260]
Length = 329
Score = 38.3 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 15/225 (6%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRYALL-GGKK--IRSFLVTECASLFNVNHLTALRVGAA 78
+L+ D + Y G IR+ + L+ +
Sbjct: 2 ELIDTLIYSQPQMIPDAIRLPYDYLAAIPGTNGDIRTQFIKSFNDLYFTIDNHDTIATIS 61
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
++ D RRG P H +Y + GN + A + Q
Sbjct: 62 EVITVFHNSSLLIDDIEDGSEFRRGLPAAHTKYGVALTLNCGNLMYFVALQTAQQKLPQY 121
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----------QVFMIQKMKTGAL 188
+ + NI ++ +L D + + + KTG L
Sbjct: 122 HPSDNKNDIALSILNILVEELLNLHHGQGLDIHWRDHLKTTKLPLIEEYMEMIMNKTGGL 181
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
A + + + ++ + GI+FQ+ DDL++ +D
Sbjct: 182 FRLAVKLLGAFS--TPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224
>gi|83774154|dbj|BAE64279.1| unnamed protein product [Aspergillus oryzae]
Length = 700
Score = 38.3 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 34/132 (25%)
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
+ I + A ++ Q++ + M + +
Sbjct: 464 EDSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMDVFVEEMRNLFIGQ 523
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
L + +Q ++ + L A N L LG F
Sbjct: 524 SFDLYWTRQGECPSQDEYLEMISQSGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQYF 583
Query: 222 QLADDLLDCEED 233
Q+ DD + ED
Sbjct: 584 QIRDDYKNLTED 595
>gi|213422747|ref|ZP_03355795.1| hypothetical protein Salmonentericaenterica_35292 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 99
Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 10/74 (13%)
Query: 1 MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
MN + ++ ++ + + L + Y + GG K+IR +
Sbjct: 33 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGY--------YIISGGGKRIRPMIA 84
Query: 59 TECASLFNVNHLTA 72
A
Sbjct: 85 VLAARAVGYQGNAH 98
>gi|327356194|gb|EGE85051.1| hypothetical protein BDDG_07996 [Ajellomyces dermatitidis ATCC
18188]
Length = 702
Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 4/153 (2%)
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+ Y + D RRG P +I Y + + + FE+++ K
Sbjct: 450 MMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR 509
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
L + + F++ K+G+ + +
Sbjct: 510 DILIDELKSLGLGQSLELH----WRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESG 565
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+L F LG +Q+ +D + E
Sbjct: 566 NPAAPDTKLSHFINLLGRYYQIWNDYQNLESSE 598
>gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 310
Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ +D+ + ET + K K+G+L+ AC G +A A +N + + ++GI
Sbjct: 146 NGQHMDVTNGIQTETDYLQMLKKKSGSLVAMACFVGTALAGAEKNTV-IIEKYANDIGIA 204
Query: 221 FQLADDL 227
Q+ +D+
Sbjct: 205 AQIDNDI 211
>gi|239609673|gb|EEQ86660.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
ER-3]
Length = 702
Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 4/153 (2%)
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+ Y + D RRG P +I Y + + + FE+++ K
Sbjct: 450 MMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR 509
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
L + + F++ K+G+ + +
Sbjct: 510 DILIDELKSLGLGQSLELH----WRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESG 565
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+L F LG +Q+ +D + E
Sbjct: 566 NPAAPDTKLSHFINLLGRYYQIWNDYQNLESSE 598
>gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum]
gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum]
Length = 298
Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 12/202 (5%)
Query: 33 TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
+ + +LL Y GK R+ L+ V + ++ +H SL+ DD
Sbjct: 8 DKSDLQLLEPYSYICESSGKGFRNTLIKSFDFWLKVGDERVKDISQVVQGLHVSSLLIDD 67
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
+ DN +RRGKP H Y I + N + F + + +I + ++ L
Sbjct: 68 IE--DNSKLRRGKPVAHSIYGIPQTINSANFVYFLIFNDCNRLGSPEATSIFIEEVIRLH 125
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
G + ++ + + L K
Sbjct: 126 RGQGYDILWRDTNKSPSEQEYMKMVNEKTGGLFRLGLRLL---------QCFSENKTNYI 176
Query: 212 CFGENLGIIFQLADDLLDCEED 233
E+LG+ +Q+ DDL++ + +
Sbjct: 177 ELVEDLGMYYQIRDDLINLDSE 198
>gi|14625004|dbj|BAB61882.1| farnesyl diphosphate synthase [Rhodovulum strictum]
Length = 138
Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
RRG PTVH+++DE TA++ G+ L T AFE+++ P +R L+ +L G+ GM+
Sbjct: 13 RRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGMV 72
Query: 161 GGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
GQ DI E ++ +Q KTGAL+ ++ E+GA + A L +
Sbjct: 73 LGQAQDIAAETAGRALSLAEITELQANKTGALIRWSAEAGARLGGAD---IAPLSAYATA 129
Query: 217 LGIIF 221
LG+ F
Sbjct: 130 LGLAF 134
>gi|329133297|gb|AEB78589.1| geranylgeranyl diphosphate synthase 1 [Balaenoptera acutorostrata]
gi|329133299|gb|AEB78590.1| geranylgeranyl diphosphate synthase 1 [Hippopotamus amphibius]
gi|329133301|gb|AEB78591.1| geranylgeranyl diphosphate synthase 1 [Sus scrofa]
Length = 119
Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
QG E + + KTG L A + + + KE L+
Sbjct: 50 HQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLN 105
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 106 TLGLFFQIRDDY 117
>gi|332812281|ref|XP_003308877.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
[Pan troglodytes]
gi|119590424|gb|EAW70018.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
gi|119590426|gb|EAW70020.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
gi|221039434|dbj|BAH11480.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
QG E + + KTG L A + + + KE L+
Sbjct: 69 HQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLN 124
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 125 TLGLFFQIRDDY 136
>gi|329133307|gb|AEB78594.1| geranylgeranyl diphosphate synthase 1 [Manis pentadactyla]
Length = 119
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
QG E + + KTG L A + + + KE L+
Sbjct: 50 HQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLN 105
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 106 TLGLFFQIRDDY 117
>gi|297661612|ref|XP_002809327.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pongo
abelii]
Length = 246
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
QG E + + KTG L A + + + KE L+
Sbjct: 69 HQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFS----DYKEDLKPLLN 124
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 125 TLGLFFQIRDDY 136
>gi|299538176|ref|ZP_07051461.1| ComQ [Lysinibacillus fusiformis ZC1]
gi|298726378|gb|EFI66968.1| ComQ [Lysinibacillus fusiformis ZC1]
Length = 309
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
+ + + +L I + + + ++ + +
Sbjct: 85 QDNDAPCNPWSNK-PLSYNLNILLGYLFIALQRIHYINCSSDVKKFFNIFIYPLMLDAIN 143
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
GQ D+ ++ I E + F + +K+G+L+ A GA + + E+++ + LG+I
Sbjct: 144 GQHTDLINDTITEQEYFDMTALKSGSLILLANLLGA--GNVCPSTFEKIKEYSYYLGVIA 201
Query: 222 QLADDLLDC 230
Q+ +D+ D
Sbjct: 202 QIRNDVNDL 210
>gi|222098585|ref|YP_002532643.1| comq [Bacillus cereus Q1]
gi|221242644|gb|ACM15354.1| ComQ [Bacillus cereus Q1]
Length = 309
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
I ++ I + +I+ + L + + + GQ LD+++E
Sbjct: 96 KHPIATNLNIIMGFLLICLQEVDKSSLSIQMKNWLKNEIHSCILNSINGQQLDLKNEIHS 155
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
E + K+G L+ AC G + + ++ + + +G+I Q+ +D+ D
Sbjct: 156 EKDYIDMVTHKSGYLIKLACLLG--TGNINPIQRSLIENYAICIGVINQIKNDMRDI 210
>gi|322800723|gb|EFZ21627.1| hypothetical protein SINV_04193 [Solenopsis invicta]
Length = 325
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 53/207 (25%), Gaps = 12/207 (5%)
Query: 41 SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-------GAAIECIHCYSLIHDDLP 93
++Y + G K+ +V N +E Y +I DD+
Sbjct: 16 KVLQYNVTGTTKLHGLIVIYAYKSITPNEQQTEDNIRLASILAWCMEMAISYLIIIDDIL 75
Query: 94 SMD---NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
G + A++ + + + + Q +
Sbjct: 76 DQSLFRRGQPCWYRHDDIGLMAINDALLLESIVYFLIRKHFKGKECYDNLVETFQQDIVF 135
Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
IG + + + I K K + A +E +
Sbjct: 136 KTLIGQFLDMSLTYKKSNLDQFTMNRYNSIAKWKEYGSLFVPTVLAMHFAGIKDSEMFKQ 195
Query: 211 RC--FGENLGIIFQLADDLLDCEEDLP 235
E + ++Q+ DD L C D
Sbjct: 196 SETILSELIVPLYQIQDDYLGCFGDFE 222
>gi|119495313|ref|XP_001264444.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
gi|119412606|gb|EAW22547.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
Length = 389
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 68/205 (33%), Gaps = 12/205 (5%)
Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
++ L+ Y GK IR L+T V + + + +H
Sbjct: 67 RDGKWSQEYEKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVPPESLSIITKVVGMLHTA 126
Query: 86 SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
SL+ DD+ DN +RRG P H + I + N + A + + +I Q
Sbjct: 127 SLLVDDVE--DNSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQ 184
Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
+L+L G+ E + KTG L A + A
Sbjct: 185 ELLNLHRGQGM-----DLFWRDTLTCPTEEDYLDMVGNKTGGLFRLAIKLM----QAEST 235
Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
+G+ FQ+ DD L+
Sbjct: 236 TGIDCVSLVNVMGLTFQICDDYLNL 260
>gi|80978890|gb|ABB54693.1| pre-ComX modifying enzyme [Bacillus mojavensis]
Length = 279
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+ + E + + K K+G+L + A++A+ N+ + + +GI
Sbjct: 123 MQGQHDDLINFPETEEECIQMMKQKSGSLTAMSAVLAAMLANGEFNQ--SIEDYAYKIGI 180
Query: 220 IFQLADDL----LDCEEDLPKK 237
I QL +D D D+ KK
Sbjct: 181 IKQLENDYYGLVNDQRSDIRKK 202
>gi|281413632|ref|ZP_06245374.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
2665]
Length = 371
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 25/73 (34%)
Query: 40 LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
+ AI GGK++R+ L A + +D
Sbjct: 1 MDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDILDRSD 60
Query: 100 IRRGKPTVHIQYD 112
RRG P+VH +++
Sbjct: 61 TRRGMPSVHRRFE 73
>gi|239787478|emb|CAX83949.1| Squalene/phytoene synthase [uncultured bacterium]
Length = 298
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 26/105 (24%), Gaps = 10/105 (9%)
Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
+ L+ T + L E + A G +
Sbjct: 75 PDHPVAQELAWTRDNFHLAPEPFLDLLDGMTMDLEGWNYETLDDLEIYCRRVAVAVGRMA 134
Query: 200 AHA--------SQNEKERLRCFGENLGIIFQLADDLL-DCEEDLP 235
L F +LGI FQL + +L D ED
Sbjct: 135 LGVLGPDPRCEPPEMLRALDRFAHHLGIAFQLTN-ILRDVNEDSA 178
>gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
Length = 177
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 58/167 (34%), Gaps = 12/167 (7%)
Query: 3 GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
L + L + + ++ L ++ + ++ + ++ ++ GGK +R +
Sbjct: 11 PALQADLSASLQLMEKSLK---------LKNKEVEQAILSMIHS--GGKLLRPAYQLLFS 59
Query: 63 SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
+ + V A ++ +D+ RR PT+ ++ A+ AG+
Sbjct: 60 -AYGSDKDREKAVALAASIEMLHTASLIHDDIVDHADTRRKLPTIRSEFGNDVAVYAGDY 118
Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
L F++++ + +K + + ++
Sbjct: 119 LFVCCFKLMADYASSMKSLQMNSRSMEKNPGRRIRTNEQTIRFVRHC 165
>gi|119481385|ref|XP_001260721.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
gi|119408875|gb|EAW18824.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
181]
Length = 702
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ F++ KTG ++ + + L +G +
Sbjct: 528 DLNWTFNKTRPTLNEYFIMVDHKTGGFFRLLLRGLCSLSGSGLD--PDLEHLITLIGRYY 585
Query: 222 QLADDLLDCEEDL--PKK 237
Q+ DD + D KK
Sbjct: 586 QIRDDYQNLASDEYTAKK 603
>gi|330806141|ref|XP_003291032.1| hypothetical protein DICPUDRAFT_38388 [Dictyostelium purpureum]
gi|325078829|gb|EGC32460.1| hypothetical protein DICPUDRAFT_38388 [Dictyostelium purpureum]
Length = 364
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 66/254 (25%), Gaps = 28/254 (11%)
Query: 4 GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
+ K I+D L+ + + D + +I +GGK +R V
Sbjct: 11 EFEEFISVFPKLKQDIIDTLV---EKKINQEIIDWVGLSIDVNPIGGKYMRGLSVLNTIK 67
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDD-----LPSMDNGYIRRGKPTVHIQYD------ 112
F MD G +RR +P H +
Sbjct: 68 DFKGVEQLDEETIFLGRVAGWCIEFLQASLLIADDIMDGGIMRRDRPCWHHYPNPLIKNL 127
Query: 113 ----EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
+ IA N I K ++ ML L H I LG
Sbjct: 128 NGVEQPIGKIAVNDAFIMESCIYILLKKYFREKPYYTKMLELYHEISHNTFLGQLFDTSA 187
Query: 169 DE--------FIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLG 218
F + + + + G +M + + + ++ +G
Sbjct: 188 CHSLKGDFSSFNLKNYFQIARFKTSYYTFYTPVALGMLMCGINYLDPQYDAMKELLLEIG 247
Query: 219 IIFQLADDLLDCEE 232
DD LDC
Sbjct: 248 EYMTAQDDYLDCYG 261
>gi|226945451|ref|YP_002800524.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter
vinelandii DJ]
gi|226720378|gb|ACO79549.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter
vinelandii DJ]
Length = 322
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ +MKTG A A A+ + E +G LGI QL DL D
Sbjct: 167 EEVVRMKTGERRALYAALAAQHAGATPEQVEAYAAYGRALGIARQLRSDLQDLFG 221
>gi|18307861|gb|AAL67721.1|AF456132_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
168]
Length = 279
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+++ E + + K K G+L + A++A+ N+ + + +GI
Sbjct: 123 MQGQHEDLRNSPETEEECIQMMKQKAGSLTAMSAVLAAMLANGEFNQT--IEDYAYKIGI 180
Query: 220 IFQLADDL----LDCEEDLPKK 237
I QL +D D D+ KK
Sbjct: 181 IKQLENDYYGLVNDQRSDIRKK 202
>gi|328767086|gb|EGF77137.1| hypothetical protein BATDEDRAFT_14267 [Batrachochytrium
dendrobatidis JAM81]
Length = 290
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 14/197 (7%)
Query: 39 LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
+L +Y + G++IR+ L+ F V + + +H SL+ DD+ D
Sbjct: 2 VLEPYQYLIQHPGQEIRNLLIEGFQKWFQVPTEKLAIIKQVVAMLHTASLLVDDVE--DG 59
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+RRG P H + + I A N A E + K ++ + L G++
Sbjct: 60 SDLRRGVPVTHKIFGVASTINAANYAYFIALENVLMLKDVRIVQAFTEELQLLHLGQGME 119
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGE 215
E+ + + KTG L G M L
Sbjct: 120 -----IHWRDTVVCPSESDYLKMVENKTGGL----LRLGVRMMQLDIESPAALEYIKLVN 170
Query: 216 NLGIIFQLADDLLDCEE 232
+G+ +Q+ DD L+ +
Sbjct: 171 LIGVFYQVRDDYLNLKS 187
>gi|322793602|gb|EFZ17061.1| hypothetical protein SINV_02858 [Solenopsis invicta]
Length = 343
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 10/155 (6%)
Query: 92 LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
MD IRRGK + D + + + + K + + + S
Sbjct: 102 DDIMDQSSIRRGKTCWYRHDDTTDLMAINDATMLESIGYYLLQKYFKRKECYNNIAESFQ 161
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKER 209
+G DEF + V +Q +G A + ++
Sbjct: 162 DVCISRGQFFDMKKCNLDEFTMDRYVITVQNKSGQLAFLMPARAGIHYATTEKNGEMLKQ 221
Query: 210 LRCFGENLGIIFQLADDLL----DCEE----DLPK 236
+G +Q+ DD L D D+ K
Sbjct: 222 TESILLEMGQFYQIQDDCLICFFDVLGKDFNDIAK 256
>gi|18307857|gb|AAL67718.1|AF456131_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
168]
gi|18307885|gb|AAL67739.1|AF456138_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. spizizenii str.
W23]
gi|79085172|gb|ABB51993.1| ComQ [Bacillus subtilis]
Length = 279
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
+ GQ D+++ E + + K K G+L + A++A+ N+ + + +GI
Sbjct: 123 MQGQHEDLRNSPETEEECIQMMKQKAGSLTAMSAVLAAMLANGEFNQT--IEDYAYKIGI 180
Query: 220 IFQLADDL----LDCEEDLPKK 237
I QL +D D D+ KK
Sbjct: 181 IKQLENDYYGLVNDQRSDIRKK 202
>gi|119174214|ref|XP_001239468.1| hypothetical protein CIMG_09089 [Coccidioides immitis RS]
Length = 643
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 10/210 (4%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ +D +L RY L K R + + V +A + + ++ +H SL+
Sbjct: 421 LPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIKSIVKMLHSASLML 480
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ +RRG+P+ H Y I + A + + I + M
Sbjct: 481 DDIEDDSP--LRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIEEMQQ 538
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE- 208
L ++ + MKTG L + + +
Sbjct: 539 LHVGQ-----SYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRLMVAESPVGEKVSDD 593
Query: 209 RLRCFGENLGIIFQLADDLLDCEE-DLPKK 237
L +G FQ+ DD + D K+
Sbjct: 594 ALNLLSCLVGRFFQIRDDYQNLASADYAKQ 623
>gi|124358874|dbj|BAF45924.1| fusicoccadiene synthase [Phomopsis amygdali]
gi|124358876|dbj|BAF45925.1| fusicoccadiene synthase [Phomopsis amygdali]
Length = 719
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-- 209
N + G M +M + +++ +A+ NE R
Sbjct: 526 MNSIMILFQGQAMDLFWTYNGHVPSEEEYYRMIDQKTGQLFSIATSLLLNAADNEIPRTK 585
Query: 210 ----LRCFGENLGIIFQLADDLLDCEE 232
L LG FQ+ DD +
Sbjct: 586 IQSCLHRLTRLLGRCFQIRDDYQNLVS 612
>gi|159901581|ref|YP_001547827.1| hypothetical protein Haur_5071 [Herpetosiphon aurantiacus ATCC
23779]
gi|159894620|gb|ABX07699.1| hypothetical protein Haur_5071 [Herpetosiphon aurantiacus ATCC
23779]
Length = 280
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 55/177 (31%), Gaps = 1/177 (0%)
Query: 61 CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
+SL + Y +I DN I P + + +
Sbjct: 47 ASSLDSYESSQECIAILNNAWHMMYGMIIRLDDIQDNQPIAPPFPNDIDLSTQYNILFSQ 106
Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFM 179
+ + + S + ++ + + S G Q D +
Sbjct: 107 YLIAESILDDLISNNLSIYRYVKIRRLWSDMMIRMSSGQYCDICSKNQPIEQDIAIKYQQ 166
Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
I + KTGA A S I+ ++ E L GE G + Q DD+ D E D+ K
Sbjct: 167 IAQSKTGATYALAFGSIGIILFEDKSIYESLAVIGEIYGTLIQYGDDINDYESDMDK 223
>gi|121715892|ref|XP_001275555.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
gi|119403712|gb|EAW14129.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
Length = 700
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
+ + KTG + ++ S L +G +
Sbjct: 527 DLHWTFIQARPTVNEYLTMVDHKTGGFFRLVLRAMGSLS--STAVDSDLEHLVTLMGRYY 584
Query: 222 QLADDLLDCEEDL--PKK 237
Q+ DD + D KK
Sbjct: 585 QIRDDHQNLASDEYTAKK 602
>gi|70939047|ref|XP_740118.1| farnesyl pyrophosphate synthase [Plasmodium chabaudi chabaudi]
gi|56517608|emb|CAH76315.1| farnesyl pyrophosphate synthase, putative [Plasmodium chabaudi
chabaudi]
Length = 255
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 55/239 (23%), Gaps = 32/239 (13%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS------LFNVNHL 70
D L+ + QH + Y LGGK R LV + N
Sbjct: 7 DAFLEHIGELVLEDHIKQHILKYYKVFDYNCLGGKNNRGILVILIYEYVKNIDINNSEWE 66
Query: 71 TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A + IE + L+ DD+ + + + A+ L ++I
Sbjct: 67 KAACLAWCIEILQASFLVADDIMDKGETRRNKHCWYLLKDVETKNAVNDCLLLSNAIYKI 126
Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML------------------------D 166
I T + G +
Sbjct: 127 IEIYLGNDACYNNIIAAFRDTVLKTIIGQHLDTNIFSNKYADPNNGVDINNITVPEQAAI 186
Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQL 223
+ ++ G ++ +++ +G FQ+
Sbjct: 187 NTKMINFDVYKNVVVHKTAYYSFFLPISCGMHLSGIAMDNLLYKKIEDISIMMGEYFQV 245
>gi|310800265|gb|EFQ35158.1| polyprenyl synthetase [Glomerella graminicola M1.001]
Length = 742
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGE 215
+ GQ D+ F + M AS + + L
Sbjct: 549 QLHLGQSHDLAWTFHCRAPSMPEYYSHLEQKTGGLFRMASRMMRASATQNKHLDACKLMS 608
Query: 216 NLGIIFQLADDLLDCEEDL 234
LG ++QL DD D +
Sbjct: 609 LLGRLYQLRDDYQDITSES 627
>gi|320591510|gb|EFX03949.1| geranylgeranyl pyrophosphate synthetase [Grosmannia clavigera
kw1407]
Length = 328
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 69/209 (33%), Gaps = 13/209 (6%)
Query: 21 DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
+D + + Y L G GK+ R+ ++ V + +
Sbjct: 23 EDFNFGARRTWTREKERIIRGPYEY-LNGVRGKEFRTQIINAFDGWLEVPVDSLAVITRV 81
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ +H SL+ DD+ D+ +RRG P H + AI + N + A + + ++
Sbjct: 82 VGMLHTASLLVDDVE--DSSSLRRGLPVAHNIFGVPQAINSANYMYFVALQEVQKLRSH- 138
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
R+ + S +G E + KTG L G
Sbjct: 139 ---QRALAIFSEELVSLHRGQGMDLFWRDTLTCPTEDDYLEMVANKTGGLF----RLGIK 191
Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
+ A LG+IFQ+ DD
Sbjct: 192 LMQAESRSLVDCVPLVNILGLIFQIQDDY 220
>gi|215447704|ref|ZP_03434456.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85]
Length = 119
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 217 LGIIFQLADDLLDCEEDLP 235
+G+ FQ DDL+ D
Sbjct: 1 MGLAFQCVDDLIGIWGDPG 19
>gi|53734594|gb|AAH83212.1| Ggps1 protein [Danio rerio]
Length = 284
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+G E + + KTG L A + + ++ K L
Sbjct: 99 HRGQGLDIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDT--- 155
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 156 -LGLYFQIRDDY 166
>gi|322797846|gb|EFZ19754.1| hypothetical protein SINV_16081 [Solenopsis invicta]
Length = 246
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+G E + KTG L A + + +E
Sbjct: 61 HRGQGMDIFWRDNFICPTEEDYKTMTIRKTGGLFNLAVRLMKLFS----TYQEDFSSLIA 116
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 117 TLGLYFQIRDDY 128
>gi|261196876|ref|XP_002624841.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
SLH14081]
gi|239596086|gb|EEQ78667.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
SLH14081]
Length = 702
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 4/153 (2%)
Query: 82 IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
+ Y + D RRG P +I Y + + + FE+++ K
Sbjct: 450 MMVYHNLLMVDDVQDGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR 509
Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
L + + F++ K+G+ + +
Sbjct: 510 DILIDELKSLGLGQSLELH----WRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESE 565
Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
+L F LG +Q+ +D + E
Sbjct: 566 NPAAPDTKLSHFINLLGRYYQIWNDYQNLESSE 598
>gi|320037302|gb|EFW19239.1| geranylgeranyl pyrophosphate synthase [Coccidioides posadasii str.
Silveira]
Length = 731
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 10/210 (4%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ +D +L RY L K R + + V +A + + ++ +H SL+
Sbjct: 421 LPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIKSIVKMLHSASLML 480
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ +RRG+P+ H Y I + A + + I + M
Sbjct: 481 DDIEDDSP--LRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIEEMQQ 538
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE- 208
L ++ + MKTG L + + +
Sbjct: 539 LHVGQ-----SYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRLMVAESPVREKVSDD 593
Query: 209 RLRCFGENLGIIFQLADDLLDCEE-DLPKK 237
L +G FQ+ DD + D K+
Sbjct: 594 ALNLLSCLVGRFFQIRDDYQNLASADYAKQ 623
>gi|332021468|gb|EGI61836.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior]
Length = 253
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+G E ++ KTG L A + + +E
Sbjct: 68 HRGQGMDIFWRDNFICPTEEDYKIMTIRKTGGLFNLAVRLMKLFS----TYEEDFSSLIA 123
Query: 216 NLGIIFQLADDL 227
LG+ FQ+ DD
Sbjct: 124 TLGLYFQIRDDY 135
>gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 435
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
T+L + L + + D R+ LGG+++R L+
Sbjct: 96 TLLAERLSEACATDPVSGRDIAERIARFTSLGGRRLRPALLWWALRAC 143
>gi|303314115|ref|XP_003067066.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106734|gb|EER24921.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 731
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 10/210 (4%)
Query: 31 MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ +D +L RY L K R + + V +A + + ++ +H SL+
Sbjct: 421 LPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIKSIVKMLHSASLML 480
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ +RRG+P+ H Y I + A + + I + M
Sbjct: 481 DDIEDDSP--LRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGNPSCLRIFIEEMQQ 538
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE- 208
L ++ + MKTG L + + +
Sbjct: 539 LHVGQ-----SYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRMLTRLMVAESPVREKVSDD 593
Query: 209 RLRCFGENLGIIFQLADDLLDCEE-DLPKK 237
L +G FQ+ DD + D K+
Sbjct: 594 ALNLLSCLVGRFFQIRDDYQNLASADYAKQ 623
>gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
Length = 390
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 18 TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
T+L + L + + D R+ LGG+++R L+
Sbjct: 51 TLLAERLSEACATDPVSGRDIAERIARFTSLGGRRLRPALLWWALRAC 98
>gi|212703088|ref|ZP_03311216.1| hypothetical protein DESPIG_01127 [Desulfovibrio piger ATCC 29098]
gi|212673354|gb|EEB33837.1| hypothetical protein DESPIG_01127 [Desulfovibrio piger ATCC 29098]
Length = 542
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 42/180 (23%), Gaps = 11/180 (6%)
Query: 50 GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
GK+ R+ L E + + A V + + +D+ I G + +
Sbjct: 91 GKRKRALLTLEWDIIPGSDDARAREVAEKVRAMVDMLPGVEDMLLDMADAIGHGFAALEL 150
Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-----------NIRSQLMLSLTHNIGLQG 158
++ V L T + L TH
Sbjct: 151 EWGMVDGWHIPQALTFRPQSWFQCLWTDRNRLRLRDGSAEGAELWPCGWLVHTHKSKSGW 210
Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
+ + + + + G ++ +K L LG
Sbjct: 211 LPRAGLFRTVAWAYLIRAYALNANIAYTQIHGLPLRLGKYPPGSTAEDKSALLHALRCLG 270
>gi|148279693|gb|ABQ53941.1| farnesylpyrophosphate synthase [Nicotiana attenuata]
Length = 116
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 219 IIFQLADDLLDCEED---LPK 236
I FQ+ DD LDC D L K
Sbjct: 1 IYFQVQDDYLDCFADPEVLGK 21
>gi|152979842|ref|YP_001353218.1| phytoene synthase [Janthinobacterium sp. Marseille]
gi|151279919|gb|ABR88329.1| phytoene synthase [Janthinobacterium sp. Marseille]
Length = 277
Score = 36.4 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 7/175 (4%)
Query: 65 FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
+ + + + + L + V DE T ++ L
Sbjct: 1 MSPDEYCQQKAAQSGSSFYYSFLFLTPDRRRAITALYAFCREVDDTVDECTDVMIARTKL 60
Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
+ + + + + ++ + L ++D + +D+ + ++
Sbjct: 61 VWWRKEVGAMMAGEPTHPVTKALQPHMAVYALDSEHLLAIIDGMEMDLDQNRYLDFIGLQ 120
Query: 185 TGALMCFACE---SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
+ S I S E + E LG+ FQL + + D ED K
Sbjct: 121 KYCWHVASVVGILSAKIFGATSPKTLE----YAEKLGLAFQLTNIIRDVGEDARK 171
>gi|240272920|gb|EER36445.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H143]
Length = 392
Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 22/201 (10%)
Query: 31 MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
+ LL Y + GK +R + +V + + + +H SL+
Sbjct: 87 WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 146
Query: 90 DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
DD+ D+ +RRG P H + + L
Sbjct: 147 DDVE--DSSTLRRGVPVAHNIFGNGSDDKFCELLPRSGRG------------------TE 186
Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
+ + G + + + +M + A +
Sbjct: 187 TQKPECDKHLREGIVKPAPRDTLTCPTEEDYLEMVGNKTGGL-FRLAIKLMQAESDTGID 245
Query: 210 LRCFGENLGIIFQLADDLLDC 230
+G+IFQ+ DD L+
Sbjct: 246 CVTLVNLMGLIFQICDDYLNL 266
>gi|150865040|ref|XP_001384090.2| hypothetical protein PICST_31380 [Scheffersomyces stipitis CBS
6054]
gi|149386296|gb|ABN66061.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 439
Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
+ + + + + + +L S +R++L G ++ ++ N+++ +
Sbjct: 16 EEEFFEFVSKLRKELSSSCPPKLRSIMRFSLFG-------ILLLSFNIMNLSYCSRFDFK 68
Query: 77 AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
+ I + DLP+ + T +
Sbjct: 69 YPLVEIITPLVNMKDLPTSSYSLYTKQNYTFDNDF 103
>gi|170027726|ref|XP_001841748.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
gi|167862318|gb|EDS25701.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
Length = 352
Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 4/177 (2%)
Query: 60 ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
E +L N+ L + CY+ + D +DN R GKP H + D + +
Sbjct: 74 ETMNLDNIEKALYLDWCSKTVWFLCYAHVIFD-DIVDNSKTRYGKPCWHRRSDVGLSAVF 132
Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
L+ + + + K L Q + + +
Sbjct: 133 DGLLIDKSIHYLMNTKFNRDIIDAVLEKL--FFLDAGQTLNDMLSKVHDLDSFNRASYEK 190
Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
+ ++ ++ +A QN +++ + ++FQ+ +D D D
Sbjct: 191 MVYLQDSTIITLPMRLAMCLAGIEDQNAVNKMQIIIAKVEVLFQMMNDYQDLFGDAE 247
>gi|73959937|ref|XP_854640.1| PREDICTED: similar to Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Canis familiaris]
Length = 259
Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE 232
+ + ++++ + +A + + + +G FQ D LD
Sbjct: 98 QVKRYVVKYKTAFYSFYLPVVATMYVAGIDGEKDHANAKKILLEMGEFFQFQADFLDLFG 157
Query: 233 D---LPK 236
D K
Sbjct: 158 DPSVTGK 164
>gi|47097440|ref|ZP_00234987.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes str. 1/2a F6854]
gi|47014195|gb|EAL05181.1| heptaprenyl diphosphate syntase component II [Listeria
monocytogenes str. 1/2a F6854]
Length = 115
Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 219 IIFQLADDLLDCEE---DLPK 236
+ FQ+ DD+LD +L K
Sbjct: 1 MAFQITDDVLDFVGTEKELGK 21
>gi|238609989|ref|XP_002397611.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
gi|215472450|gb|EEB98541.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
Length = 121
Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Query: 22 DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
+ ++ H+ + L +Y L K++R +V + N A E
Sbjct: 2 SRVRESLGHLLGSAHPSLDEIAKYYFLRPSKQLRPLIVLLFSQATNGLGKNWPAKLWAAE 61
Query: 81 CIHCYSLIHDDLPSMDNGYIRRGKPTV 107
C + + + +
Sbjct: 62 CQGAGGCMDELDKPLSRPDVLNDWNPN 88
>gi|158339096|ref|YP_001520273.1| hypothetical protein AM1_6022 [Acaryochloris marina MBIC11017]
gi|158309337|gb|ABW30954.1| hypothetical protein AM1_6022 [Acaryochloris marina MBIC11017]
Length = 322
Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 10/173 (5%)
Query: 55 SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
+ L + + V + I + DD+ DN K + +
Sbjct: 41 AILPVATGLACGGSIEQLIPVTSTIVAVAFALRTLDDIADQDNSNALHQKIGIGRAANFS 100
Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
A+IA + S L + ++++ + L + GQ DIQ E
Sbjct: 101 AALIA----------LASREIGVLSKSSPDSILMTGDYFDALLRIFVGQDKDIQREVRSL 150
Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
+ ++KT A A GA A N ++ R G ++G Q+ DD+
Sbjct: 151 VAYEEVVELKTVAAYELAAIVGANAVTADGNFTKKCRVCGRHIGWAQQILDDI 203
>gi|219849930|ref|YP_002464363.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
gi|219544189|gb|ACL25927.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
Length = 305
Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 47/178 (26%), Gaps = 13/178 (7%)
Query: 52 KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
++R+ LV A L AA+E I + H++L + R K
Sbjct: 45 RLRALLVLAVARLGGATGEHVAHAAAAVELIEAATRAHNNLIDEQARRLGRVKNGAWDHG 104
Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
+ L + + P+ + + + L +
Sbjct: 105 VALMVGDYLFALASGEMALSPDPRIIGLYSHAVMQICEGQLTTVTNLIPHETALATYWQR 164
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ----LAD 225
+ + + + ++ G++LG+ Q + D
Sbjct: 165 AEALAGALPAAAAQAGI---------LCSNLPDTFLAPAARLGKHLGLARQLAAEIRD 213
>gi|294658024|ref|XP_460338.2| DEHA2E23870p [Debaryomyces hansenii CBS767]
gi|199433130|emb|CAG88623.2| DEHA2E23870p [Debaryomyces hansenii]
Length = 346
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
T I ML+L H GL IQ+ + + + KTG L + +
Sbjct: 140 TYQISQILVDEMLNLHHGQGLDIYWRDSGDYIQNHLPEIDEYLKMVMNKTGGLFRLSVKL 199
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + ++ + LGII+Q+ DD L+
Sbjct: 200 LEVFSPTFKST--SVIPLANLLGIIYQIRDDYLNL 232
>gi|167755976|ref|ZP_02428103.1| hypothetical protein CLORAM_01496 [Clostridium ramosum DSM 1402]
gi|167703968|gb|EDS18547.1| hypothetical protein CLORAM_01496 [Clostridium ramosum DSM 1402]
Length = 277
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 34/142 (23%), Gaps = 7/142 (4%)
Query: 98 GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
+ + + D + + + + + +L + +
Sbjct: 72 HPLSKHTTRYNECVDYAAKMTIVLTYFKCEDDWL---DERKISKQAYKRLLRKAYQEIKE 128
Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
F G I A+ + L FG L
Sbjct: 129 EYPDKLAHIETCLHCINDYESQGITNLDEISKYFGEVMGEICAYKDDEWHDELYEFGFYL 188
Query: 218 G--IIFQLADDLLDCEEDLPKK 237
G I F D D E+DL K+
Sbjct: 189 GKFIYF--IDAYEDIEQDLKKR 208
>gi|254386870|ref|ZP_05002157.1| hypothetical protein SSAG_06393 [Streptomyces sp. Mg1]
gi|194345702|gb|EDX26668.1| hypothetical protein SSAG_06393 [Streptomyces sp. Mg1]
Length = 356
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 68/229 (29%), Gaps = 23/229 (10%)
Query: 10 QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR------SFLVTECAS 63
++ S ID ++ L Q + ++ +R+ ++R LV
Sbjct: 33 RQVSADIDAEMELALDQLGPAAEAVKAS-VVKLLRHQ-----RLRHPLSVLPMLV----- 81
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
V T + L + +G+ + + ++I+G L
Sbjct: 82 -HGVETGTLRPALPISALHVLWWTSACFLDDLADGHGAPLSAGLTQNEAVLASVISGTIL 140
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
I + S L + + + + + V +
Sbjct: 141 PLRIIHSI-----PAPAPVHSALTAEIATGWTVGTEGQLRDIRADADNATRKSVIAAYRG 195
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
K+G AI++ A R R FG GI++Q+ +D D
Sbjct: 196 KSGGPFSMITAMAAILSGAHPGRIARWREFGYVFGILWQMFNDQEDILS 244
>gi|154304945|ref|XP_001552876.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
gi|150853920|gb|EDN29112.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
Length = 307
Score = 36.0 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
+ + E + KTG L A + + S + +
Sbjct: 133 ITKVGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLAVKLMQAESQTSGDCVPLV----N 188
Query: 216 NLGIIFQLADDLLDCEE 232
+GIIFQ+ DD +
Sbjct: 189 LIGIIFQIRDDYQNLSS 205
>gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
[Callithrix jacchus]
Length = 261
Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75
+T+ +LL+ T L Y G GK R +V A N++H + V
Sbjct: 83 ETLFQELLIST---------SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHV 133
Query: 76 GAAIECI-----HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
A+ I ++ +D+ RRGK TV+ + E A++AG+ +L+ A
Sbjct: 134 QASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIA 193
Query: 131 IS 132
++
Sbjct: 194 LA 195
>gi|166835937|gb|ABY90139.1| farnesyl diphosphate synthase [Bupleurum chinense]
Length = 155
Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 76 GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSP 134
G IE + Y L+ DD+ MD + RRG+P A+ G L + I+
Sbjct: 2 GWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGMIAVNDGILLRNHIPRILKKH 59
Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTGALM 189
Q + + + G + + + E I +
Sbjct: 60 FRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSF 119
Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+MA + ++ +G FQ+ D
Sbjct: 120 YLPVACALLMAGEDLEKHNNVKDVLIEMGTYFQVQD 155
>gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens]
Length = 306
Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+D+ RRGK TV+ + E A++AG+ +L+ A ++
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
>gi|82596914|ref|XP_726459.1| farnesyl pyrophosphate synthase [Plasmodium yoelii yoelii str.
17XNL]
gi|23481877|gb|EAA18024.1| farnesyl pyrophosphate synthase [Plasmodium yoelii yoelii]
Length = 151
Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 15/52 (28%), Gaps = 2/52 (3%)
Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
+ + I +++ +G FQ DD LD D
Sbjct: 1 MCIYICTYIHSMQLSGIA--MDNLLYKKIEDISIMMGEYFQAHDDYLDIFGD 50
>gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b
[Homo sapiens]
Length = 306
Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+D+ RRGK TV+ + E A++AG+ +L+ A ++
Sbjct: 179 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 220
>gi|317506405|ref|ZP_07964210.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
BAA-974]
gi|316255285|gb|EFV14550.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
BAA-974]
Length = 221
Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 9 LQENSKRIDTILDDLLLQTASHMQTQHNDRL-----LSAIRYALLGGKKIRSFLVTECAS 63
L +++ + + + + +T SH++ ++ IRY GGK +R+ L T
Sbjct: 28 LADSAALVFPAVCEAIAETPSHVRRVIEYHFGWDAGVAPIRY---GGKAVRAALATLSCE 84
Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
A+ +E +H SL+HDD+ +D RRG+P + A++AG+ L
Sbjct: 85 ALGGAAALAVDAAVCVELLHNASLLHDDI--IDGDRQRRGRPAAWTVFGVPAAMLAGDAL 142
Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
A ++ ++ + +++ S T I + + +L ++V +
Sbjct: 143 FFLAMGRAAAMQSGTACDSVGKVIDSFTEVIEGEYL---DILLEGRSGATVSEVEAMAAS 199
Query: 184 KTGALMCFACESGAIMAHAS 203
KTGAL+ AC G A
Sbjct: 200 KTGALIALACVLGGSAAGVD 219
>gi|302544313|ref|ZP_07296655.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces hygroscopicus ATCC 53653]
gi|302461931|gb|EFL25024.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
[Streptomyces himastatinicus ATCC 53653]
Length = 266
Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ GA+ + A++ + L +GE LG+
Sbjct: 164 TAVSGRLGAVTSGATEEIADTLAVYGERLGVA 195
>gi|326387683|ref|ZP_08209289.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207729|gb|EGD58540.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 314
Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + + A++ ++ E L G +LG+ FQLA+
Sbjct: 122 WQPRNETDLMRYCWHVAGAVGVMMAVVMGVDPDDAETLERAG-DLGMAFQLAN 173
>gi|330918492|ref|XP_003298243.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1]
gi|311328676|gb|EFQ93661.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1]
Length = 723
Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 64/216 (29%), Gaps = 12/216 (5%)
Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
++ + + + ++ + Y + L K +R V +V T L + +
Sbjct: 405 IEQTIAHHLTKDRLLDSEHAKAPFDYISSLPSKGVRDVFVDALNVWLDVPTPTILHIKSI 464
Query: 79 IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
+ SL+ DD+ + + + +EI+++ +
Sbjct: 465 SNRLQSASLMLDDIEDGSSLRRSHPATHTVFG--------TAQTINSGCWEILNAVQETQ 516
Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--- 195
+ + ++ + G E + + KTG L
Sbjct: 517 QLGPEAVKIVLEELSELHIGQSYDLYWTQHSCCPSEDEYLEMVSKKTGGLFRLIVRLLLD 576
Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
G+ + + +GI +Q+ DD +
Sbjct: 577 GSESKAPKGHLHTDMGHLASLIGIQYQIRDDYQNLY 612
>gi|326200898|ref|ZP_08190770.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782]
gi|325988466|gb|EGD49290.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782]
Length = 343
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 83/242 (34%), Gaps = 13/242 (5%)
Query: 1 MNGGLPSKLQENSKRIDTILDDLL------LQTASHMQTQHNDRLLSAIRYALLGGKKIR 54
M+ L + + K + L D+ S+ + + + A RYA KIR
Sbjct: 1 MDITLIEEWKIYKKALKKELFDIFKCSKNCEDCLSNPNSDCLNPAIRAARYACYEPVKIR 60
Query: 55 SFLV--TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
+ SL + Y+ H +D +R + ++ +
Sbjct: 61 PVIFSSYMLKSLTDNIDFVNNFNKVCFAFDFLYNAAHIQDDLIDESEVRESRKCTYLVFG 120
Query: 113 EVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
++A N L+ A E+ + K+ +S ++ + L + + + +
Sbjct: 121 RDYTLLASNILIFKAVELFLDFIKSTDLPKDKSLKLMGAFNYAYLISEGKSRDVASRGKV 180
Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDC 230
D I + + G LM E I+ + +E +L LG++ + DD LD
Sbjct: 181 NDYDTYERIVRDQVGVLMRGIIELPYIVTGSEFPDEVFKLSEI---LGLLAHILDDFLDV 237
Query: 231 EE 232
Sbjct: 238 FG 239
>gi|67523903|ref|XP_660011.1| hypothetical protein AN2407.2 [Aspergillus nidulans FGSC A4]
gi|40745362|gb|EAA64518.1| hypothetical protein AN2407.2 [Aspergillus nidulans FGSC A4]
gi|259487812|tpe|CBF86781.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 675
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
+ + ++ KTG + + + N L LG +Q+ D
Sbjct: 505 HSNECADVFIEYLVMVDNKTGGFFRLVLRLLEVESESEPN--PELMHLFTLLGRYYQIRD 562
Query: 226 DLLDCEEDL--PKK 237
D L+ + KK
Sbjct: 563 DYLNLASEEYTAKK 576
>gi|325289826|ref|YP_004266007.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM
8271]
gi|324965227|gb|ADY56006.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM
8271]
Length = 244
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 35/105 (33%)
Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
A + + +L + + T I ++++ +
Sbjct: 89 PEQARQYPILVGDYLFGQTFLKLCEKDLHPYLREFTGLIETMNEGVIHRWSLKEKQMTLE 148
Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
+ I + ++ A A + A ++ K++L FG ++G+
Sbjct: 149 EYKHILSKERASVTKLAAGITAELNGAEESVKDQLESFGYHIGMA 193
>gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens]
Length = 297
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 37 DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHD 90
L Y G GK R +V A N++H + A+ ++
Sbjct: 126 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 185
Query: 91 DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
+D+ RRGK TV+ + E A++AG+ +L+ A ++
Sbjct: 186 HDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALA 227
>gi|71652380|ref|XP_814848.1| carbonic anhydrase-like protein [Trypanosoma cruzi strain CL
Brener]
gi|70879856|gb|EAN92997.1| carbonic anhydrase-like protein, putative [Trypanosoma cruzi]
Length = 522
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 10/141 (7%), Positives = 31/141 (21%), Gaps = 3/141 (2%)
Query: 69 HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
+ + + + + + M + + ++ A
Sbjct: 315 DMQHMNYSMCMRNMENHHKNSSQMEGMSGAMHHMNCSMCMRNMENHHKNSSQMEGMSGAM 374
Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
++ + + G + M + + M + +
Sbjct: 375 HHMNCSMCMRNMENHHKNSSQMEGMSGAMHHMNCSMCMRNMENHHKNSSQMEGMSSEEMS 434
Query: 186 GALMCFACESGAIMAHASQNE 206
SGA +A + E
Sbjct: 435 MMERSANVPSGAQLAGLASEE 455
>gi|304321749|ref|YP_003855392.1| phytoene synthase [Parvularcula bermudensis HTCC2503]
gi|303300651|gb|ADM10250.1| phytoene synthase [Parvularcula bermudensis HTCC2503]
Length = 321
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD---DLLD 229
+ AI+ + L +LGI FQL + D++D
Sbjct: 139 YCYHVAGVVGVMMAIIMGVDPEDDNTLNR-ASDLGIAFQLTNICRDVID 186
>gi|156351541|ref|XP_001622558.1| predicted protein [Nematostella vectensis]
gi|156209125|gb|EDO30458.1| predicted protein [Nematostella vectensis]
Length = 147
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 7/145 (4%), Positives = 30/145 (20%), Gaps = 4/145 (2%)
Query: 51 KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
K +R + + + + PS+ + ++
Sbjct: 4 KCLRPSVCIATC----CQPSVCIATCCQLHVCKICMYVKCVKPSVSIATCCQLHVCKMVK 59
Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
A + + + + ++ + + +
Sbjct: 60 PSVCIATCCQLHVCKMPTCCQLHVCKMREAVCVCMYVKCVKPSVCIATCCQLHVCKMVKP 119
Query: 171 FIDETQVFMIQKMKTGALMCFACES 195
+ + +K + C+
Sbjct: 120 SVSIATCCQLHCVKPSVCVATCCQL 144
>gi|296330769|ref|ZP_06873245.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675758|ref|YP_003867430.1| isoprenyl-trasferase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152083|gb|EFG92956.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414002|gb|ADM39121.1| isoprenyl-trasferase (ComX modification) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 286
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ DI + E + K K+GAL C G ++A + + + LGII
Sbjct: 124 QGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGII 181
Query: 221 FQLADDLLDCE 231
Q+ +D
Sbjct: 182 AQIENDYQGLF 192
>gi|18307873|gb|AAL67730.1|AF456135_1 pre-ComX modifying enzyme [Bacillus mojavensis]
Length = 286
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ DI + E + K K+GAL C G ++A + + + LGII
Sbjct: 124 QGQHDDIVNAPQTEETCLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGII 181
Query: 221 FQLADDLLDCE 231
Q+ +D
Sbjct: 182 AQIENDYQGLY 192
>gi|79085124|gb|ABB51990.1| ComQ [Bacillus mojavensis]
Length = 286
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
GQ DI + E + K K+GAL C G ++A + + + LGII
Sbjct: 124 QGQHDDIVNAPQTEETCLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGII 181
Query: 221 FQLADDLLDCE 231
Q+ +D
Sbjct: 182 AQIENDYQGLY 192
>gi|67524307|ref|XP_660215.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4]
gi|40745560|gb|EAA64716.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4]
gi|259488050|tpe|CBF87199.1| TPA: geranylgeranyl diphosphate synthase, putative (JCVI)
[Aspergillus nidulans FGSC A4]
Length = 645
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 26/121 (21%), Gaps = 8/121 (6%)
Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
+ I + T+ N + +L G
Sbjct: 459 HSQAINSANYMFIQAVRATRSFHNPEAMDILLEELENLYLGQSWDLQWKYNLTCPSIDDY 518
Query: 178 FMIQKMKTGALMCFACES--------GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
+ KTG + G + L G FQ+ DD ++
Sbjct: 519 TNMIDNKTGGMFRLLLRLLQNEAGPGGGYGCDQAPGLSLLLDRLTTQFGRFFQIRDDYMN 578
Query: 230 C 230
Sbjct: 579 L 579
>gi|225629764|ref|ZP_03787710.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591383|gb|EEH12477.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 76
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 16 IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
+ + L + ++ + I + + GGKKIR LV + N +
Sbjct: 16 VSSDLSAMNDFVFKNVNDEDAKLAADIISHLVRSGGKKIRPKLVFIICKMLNYSG 70
>gi|167519819|ref|XP_001744249.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777335|gb|EDQ90952.1| predicted protein [Monosiga brevicollis MX1]
Length = 237
Score = 34.8 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 12/177 (6%)
Query: 54 RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
RS + A +F ++ ++ ++ H SLI DD+ R +
Sbjct: 1 RSKSIQALADVFEIDDCDLQQLKQCVDRFHELSLIADDIEDDSTLRRDRECAHIRFGIPA 60
Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
I S P+ + + L +G
Sbjct: 61 AMNSTYLLFFKL----IQSVPERFQAHHHETLTALVDGSVRAHRGQGLEIYWRDNKYCPT 116
Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
+ + + ES + + Q + L GI FQ+ DD ++
Sbjct: 117 LDEYIEMVQFGGKWT-----ESLGWVWKSPQQQILELFDI---TGIFFQIRDDYINL 165
>gi|85709262|ref|ZP_01040327.1| phytoene synthase [Erythrobacter sp. NAP1]
gi|85687972|gb|EAQ27976.1| phytoene synthase [Erythrobacter sp. NAP1]
Length = 336
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ---LADDL 227
+ + A++ +K+ L +LG+ FQ +A D+
Sbjct: 144 WRPRTEADMMRYCYHVAGAVGVMMAVVMGVDPKDKDTLDR-ANDLGLAFQLSNIARDI 200
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.120 0.344
Lambda K H
0.267 0.0368 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,398,000,063
Number of Sequences: 14124377
Number of extensions: 48665084
Number of successful extensions: 241147
Number of sequences better than 10.0: 6219
Number of HSP's better than 10.0 without gapping: 5847
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 227375
Number of HSP's gapped (non-prelim): 6695
length of query: 237
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 102
effective length of database: 2,936,002,735
effective search space: 299472278970
effective search space used: 299472278970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.8 bits)