RPSBLAST alignment of GI: 254781111 and protein with PDBid: 3lk5

>3lk5_A Geranylgeranyl pyrophosphate synthase; structural genomics, protein structure initiative; 1.90A {Corynebacterium glutamicum} Length = 380

 Score =  137 bits (345), Expect = 3e-33
 Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 27/250 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIR------SFLVT 59
           L +  + +   L   L      +          ++ +R  +L GGK+IR       FL  
Sbjct: 18  LDKFPEVVRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRIRPLYAWAGFLAA 77

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------- 109
           +     +    + L   A++E I   +LIHDD+  +D+   RRG PTVH           
Sbjct: 78  QGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSSDTRRGAPTVHRAVEADHRANN 135

Query: 110 ------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                  +    +I+AG+  L +A +++       +   R++          + G L   
Sbjct: 136 FEGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALARTRDAWRGMRTEVIGGQLLDI 195

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            L+       E    + +       +      GA +A  S    + L  +G ++GI FQL
Sbjct: 196 YLESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQL 255

Query: 224 ADDLLDCEED 233
            DDLL    D
Sbjct: 256 RDDLLGVFGD 265