RPSBLAST alignment of GI: 254781111 and protein with PDBid: 3p8l

>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis} Length = 302

 Score =  163 bits (413), Expect = 4e-41
 Identities = 86/233 (36%), Positives = 134/233 (57%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L +  Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    +
Sbjct: 10  LTNFSQQHLPLVEKVMVDFIAEYTE------NERLKEAMLYSIHAGGKRLRPLLVLTTVA 63

Query: 64  LFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F     T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+G
Sbjct: 64  AFQKEMETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDG 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
           LLT AF+++S  +  L + +   LM  L    G QGM+ GQM DI+ E +  T  ++  +
Sbjct: 124 LLTGAFQLLSLSQLGLSEKVL--LMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAV 181

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KTGAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    
Sbjct: 182 HEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATST 234