RPSBLAST alignment of GI: 254781111 and protein with PDBid: 3p8r

>3p8r_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.50A {Vibrio cholerae} Length = 302
 Score =  149 bits (378), Expect = 4e-37
 Identities = 84/231 (36%), Positives = 118/231 (51%), Gaps = 10/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            L    +R +  LD  L +            L+ A+RY LL GGK+ R +LV     +  
Sbjct: 12  ALSSYQQRNNQQLDQWLNR-----IPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLG 66

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ L T 
Sbjct: 67  CELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTL 126

Query: 127 AFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKM 183
           AF I      +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  I + 
Sbjct: 127 AFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRN 186

Query: 184 KTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGALM  A   GA+      +     L  + E +G+ FQ+ DD+LD   D
Sbjct: 187 KTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 237