HHsearch alignment for GI: 254781112 and conserved domain: COG0725
>COG0725 ModA ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism].
Probab=98.13 E-value=2.2e-05 Score=52.95 Aligned_cols=202 Identities=17% Similarity=0.225 Sum_probs=121.4
Q ss_pred HHHHCCCEEEEECCCC-CCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC-CCCCHHCCC-C
Q ss_conf 7885895899962899-872487046998488988521678997629985556689889886431032-211000036-7
Q gi|254781112|r 36 RTEDQSALRVGTDGIY-PPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR-YDVLVNVAI-T 112 (274)
Q Consensus 36 ~~~~~~~l~v~~~~~~-pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~-~D~~~~~~~-t 112 (274)
T Consensus 25 ~~~~~~~i~VfAAaSL~~~l~---------------~i~~~F~~~~~~~V~~~f~gS~~l~~qIe~Ga~~D~fiSa~~~~ 89 (258)
T COG0725 25 AAQEAATITVFAAASLTDALE---------------EIAKQFEKETGVKVEVEFGGSGALARQIEQGAPADLFISADDAY 89 (258)
T ss_pred CCCCCCEEEEEEEHHHHHHHH---------------HHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEECCHHH
T ss_conf 445674099998156689999---------------99999999879879999613899999997599868799888888
Q ss_pred HH--HHHH-H--CCCCCCCCCCCCCCCCCCCC-CCCCCCCC---CCCCEEE------ECCCHHHHHHHCC------CCCC
Q ss_conf 56--7542-0--02333222222222111222-21111123---3432023------1010122332013------4542
Q gi|254781112|r 113 PE--RQKK-Y--DFSIPYIAHRVLLVVRSDQQ-DIRSFKDL---TDKTVAQ------ILGTDLSRFAKEL------KSHL 171 (274)
Q Consensus 113 ~e--R~~~-~--~fs~p~~~~~~~~~~~~~~~-~~~~~~dL---~g~~V~~------~~g~~~~~~l~~~------~~~~ 171 (274)
T Consensus 90 ~~~l~~~g~~~~~~~~~fa~n~lvl~~~~~~~~~~~~~~~l~~~~~~~lai~~p~~~P~G~ya~~~l~~~g~~~~~~~k~ 169 (258)
T COG0725 90 MDKLEDKGLIYADSRIVFAGNRLVLAVPKGSKKKIESLEDLLERPDVRLAIGDPKTVPAGKYAKEALELLGLWYTLKDKL 169 (258)
T ss_pred HHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHCCCCE
T ss_conf 99998668856671577425748999868874565129887308785799648876971499999999705145336754
Q ss_pred EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHHH
Q ss_conf 1336855777755443210036655899999984587667326236776877079998189--98999999999999997
Q gi|254781112|r 172 VFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG--NNKLTRSINEILCAIHL 249 (274)
Q Consensus 172 ~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~L~~~in~~l~~l~~ 249 (274)
T Consensus 170 v~~~~v~~~l~~V~~G~ad~g~vy~sd~~~~----~~~~~~~~~~~~~~~Pi~y~iav~~~~~~~~~A~~f~~fl~s--- 242 (258)
T COG0725 170 VLATNVRQALAYVETGEADAGFVYVSDALLS----KKVKIVGVFPEDLHSPIVYPIAVLKNAKNPELAKEFVDFLLS--- 242 (258)
T ss_pred EECCCHHHHHHHHHCCCCCEEEEEEEHHHHC----CCCEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC---
T ss_conf 6536579899998637877799997633406----776089973566689716789997388985999999999718---
Q ss_pred CCHHHHHHHHH
Q ss_conf 98599999876
Q gi|254781112|r 250 DGTYKKIFDRY 260 (274)
Q Consensus 250 ~G~~~~I~~kw 260 (274)
T Consensus 243 -~~a~~il~~~ 252 (258)
T COG0725 243 -PEAQEILEKY 252 (258)
T ss_pred -HHHHHHHHHC
T ss_conf -7779999984