HHsearch alignment for GI: 254781112 and conserved domain: COG1638
>COG1638 DctP TRAP-type C4-dicarboxylate transport system, periplasmic component [Carbohydrate transport and metabolism].
Probab=97.78 E-value=0.00021 Score=46.96 Aligned_cols=173 Identities=13% Similarity=0.080 Sum_probs=103.3
Q ss_pred EEEHHHHHHHCCCCCCCCCCCH------HHHHHHHHCCCCCCCH-HCCCCHHHHH-HHCCCCCCCCCCC-----------
Q ss_conf 5216789976299855566898------8988643103221100-0036756754-2002333222222-----------
Q gi|254781112|r 70 IDLIKEVAHRLNLKVEFFETAV------SGLITGLDTNRYDVLV-NVAITPERQK-KYDFSIPYIAHRV----------- 130 (274)
Q Consensus 70 ~dl~~~i~~~lg~~~~~~~~~~------~~~~~~l~~g~~D~~~-~~~~t~eR~~-~~~fs~p~~~~~~----------- 130 (274)
T Consensus 47 ~~fa~~v~ekt~G~l~i~vfP~~qLG~~~~~ie~l~~G~id~~~~s~~~l~~~~P~~~v~~lPflf~d~~~~~~~~~~~~ 126 (332)
T COG1638 47 KKFAELVEEKTGGRLKIEVFPNSQLGGEAEMIEQLRSGTLDIGVVSLGFLAGLVPEFGVFDLPFLFRDEEHARRVLDSEF 126 (332)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCEEECCCEEECCHHHHHHHHHHHH
T ss_conf 99999999871993899976675668769999999659730785065232113875012248755189999999971388
Q ss_pred -----------CCC--------CC--CC-CCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHH
Q ss_conf -----------222--------11--12-222111112334320231010122332013454213368557777554432
Q gi|254781112|r 131 -----------LLV--------VR--SD-QQDIRSFKDLTDKTVAQILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKR 188 (274)
Q Consensus 131 -----------~~~--------~~--~~-~~~~~~~~dL~g~~V~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~l~~gr 188 (274)
T Consensus 127 g~~l~~~~e~~g~~~l~~~~~G~R~~t~~k~PI~~peDlkGlkiRv~~s~~~~~~~~a~GA~P~pm~-f~Evy~aLqtGv 205 (332)
T COG1638 127 GEELLKSLEAKGLKGLAFWENGFRQFTSNKRPIKTPEDLKGLKIRVPQSPLLLAMFKALGANPTPMP-FAEVYTALQTGV 205 (332)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCC-HHHHHHHHHCCC
T ss_conf 9999999997695799986275223334678778968967984635898899999998699897788-899999997497
Q ss_pred HHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC-----CHHHHHHHHHHHHHH
Q ss_conf 10036655899999984587667326236776877079998189-----989999999999999
Q gi|254781112|r 189 TDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG-----NNKLTRSINEILCAI 247 (274)
Q Consensus 189 vD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~L~~~in~~l~~l 247 (274)
T Consensus 206 VDGqEnp~~~i--~~~k~~EVqky--~t~tnH~~~~~~~~~s~~~w~~L~~e~q~il~~aa~e~ 265 (332)
T COG1638 206 VDGQENPLSNI--YSAKLYEVQKY--LTLTNHIYLPLAVLVSKAFWDSLPEEDQTILLEAAKEA 265 (332)
T ss_pred CCCCCCCHHHH--HCCCHHHHHHH--HHHCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 00441767666--10426567566--52156655542689738988309999999999999999