HHsearch alignment for GI: 254781112 and conserved domain: COG3181

>COG3181 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.99  E-value=0.039  Score=32.88  Aligned_cols=133  Identities=17%  Similarity=0.140  Sum_probs=82.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC-------CCCEEEECC--CHH----HHHHHCCC--CCCEEECCHHHHHHHHHHHHH
Q ss_conf             222222222111222211111233-------432023101--012----23320134--542133685577775544321
Q gi|254781112|r  125 YIAHRVLLVVRSDQQDIRSFKDLT-------DKTVAQILG--TDL----SRFAKELK--SHLVFSHNFEQSLQLLLSKRT  189 (274)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~dL~-------g~~V~~~~g--~~~----~~~l~~~~--~~~~~~~~~~~~~~~l~~grv  189 (274)
T Consensus       119 v~~~p~~l~v~~~s~-~~t~~dlv~~~k~~p~~v~~~~~g~Gs~dhl~~~~~~k~~Gi~~~~Vpy~g~gea~taLlgg~v  197 (319)
T COG3181         119 LVSDPGVLVVRADSP-YKTLKDLVAYAKADPGSVIGGGSGLGSADHLAGALFAKAAGIKITYVPYKGGGEALTALLGGHV  197 (319)
T ss_pred             EECCCCEEEEECCCC-CCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCE
T ss_conf             113661599817887-3669999999985998089547888958899999999973896257741686487899860866


Q ss_pred             HCCCCCHHHHHHHHHHCCCCCCC-------------EE----ECCCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHCC
Q ss_conf             00366558999999845876673-------------26----236776877079998189-9899999999999999798
Q gi|254781112|r  190 DATMIPDIPFFNFLERRPHDGNL-------------FK----IADRMKDNSAVAFMMRKG-NNKLTRSINEILCAIHLDG  251 (274)
Q Consensus       190 D~~~~~~~~~~~~~~~~~~~~~~-------------~~----~~~~~~~~~~~~~~~~k~-~~~L~~~in~~l~~l~~~G  251 (274)
T Consensus       198 ~a~~~~~se~~~~vksG-~lr~Lav~s~eRl~~~pdvPT~~E~G~~~~~~~wrgvfap~g~~~e~~~~~~~a~kk~l~s~  276 (319)
T COG3181         198 DAGSTNLSELLSQVKSG-TLRLLAVFSEERLPGLPDVPTLKEQGYDVVMSIWRGVFAPAGTPDEIIAKLSAALKKALASP  276 (319)
T ss_pred             EEEECCHHHHHHHHCCC-CEEEEEEECHHHCCCCCCCCCHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCH
T ss_conf             54436712435563057-46787753431067799999867638754664435898079999999999999999986398


Q ss_pred             HHHHHHHH
Q ss_conf             59999987
Q gi|254781112|r  252 TYKKIFDR  259 (274)
Q Consensus       252 ~~~~I~~k  259 (274)
T Consensus       277 e~~~~~~~  284 (319)
T COG3181         277 EWQKRLKE  284 (319)
T ss_pred             HHHHHHHH
T ss_conf             89999985