HHsearch alignment for GI: 254781112 and conserved domain: KOG1054
>KOG1054 consensus.
Probab=99.10 E-value=1.5e-10 Score=85.02 Aligned_cols=218 Identities=20% Similarity=0.343 Sum_probs=141.6
Q ss_pred CCCEEEEECCCCCCEEEEEE-----CCCCCEEEEEEEEHHHHHHHCCCCCCCCCC------------C-HHHHHHHHHCC
Q ss_conf 89589996289987248704-----699848898852167899762998555668------------9-88988643103
Q gi|254781112|r 40 QSALRVGTDGIYPPHSFHAQ-----DGRGELTGFDIDLIKEVAHRLNLKVEFFET------------A-VSGLITGLDTN 101 (274)
Q Consensus 40 ~~~l~v~~~~~~pP~~~~~~-----d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~------------~-~~~~~~~l~~g 101 (274)
T Consensus 416 n~tvvvttiL~s-pyvm~kkn~~~~egn~ryEGyCvdLa~~iAkhi~~~Y~l~iv~dgkyGardaD~k~WnGMvGeLv~g 494 (897)
T KOG1054 416 NRTVVVTTILES-PYVMLKKNHEQLEGNERYEGYCVDLAAEIAKHIGIKYKLFIVGDGKYGARDADTKIWNGMVGELVYG 494 (897)
T ss_pred CCEEEEEEECCC-CHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 652899971379-5457775477731776431338999999997507417899923776566688764113346787558
Q ss_pred CCCCC-HHCCCCHHHHHHHCCCCCCCCCCCCCCCCC-CC--CCCCCCCC-------------------------------
Q ss_conf 22110-000367567542002333222222222111-22--22111112-------------------------------
Q gi|254781112|r 102 RYDVL-VNVAITPERQKKYDFSIPYIAHRVLLVVRS-DQ--QDIRSFKD------------------------------- 146 (274)
Q Consensus 102 ~~D~~-~~~~~t~eR~~~~~fs~p~~~~~~~~~~~~-~~--~~~~~~~d------------------------------- 146 (274)
T Consensus 495 rAdiavApLTIt~~REeviDFSKPfMslGISIMIKKPqKsk~gVFSFldPLa~eIWm~ivfaYiGVSvvlFLVSrFSPYE 574 (897)
T KOG1054 495 RADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYE 574 (897)
T ss_pred CCCEEEEEEEEEHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCCHH
T ss_conf 43347722364301244642466344427689980766578870562154577899999998735158899874257301
Q ss_pred --------------------------------------------CCCCCEE---------EECCCHH--HHH--------
Q ss_conf --------------------------------------------3343202---------3101012--233--------
Q gi|254781112|r 147 --------------------------------------------LTDKTVA---------QILGTDL--SRF-------- 163 (274)
Q Consensus 147 --------------------------------------------L~g~~V~---------~~~g~~~--~~~-------- 163 (274)
T Consensus 575 wh~Ee~~rg~~t~~~~~NeFgifNsLWFsLgAFMQQG~DI~PRslSGRIvggvWWFFTlIIiSSYTANLAAFLTvErMvs 654 (897)
T KOG1054 575 WHTEEFERGRFTPSDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVS 654 (897)
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 00221146887888998621136778999999996577878310366551020555456454450567888886986348
Q ss_pred --------HHCCCC--------------------------------C-CEEECCHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf --------201345--------------------------------4-21336855777755443210036655899999
Q gi|254781112|r 164 --------AKELKS--------------------------------H-LVFSHNFEQSLQLLLSKRTDATMIPDIPFFNF 202 (274)
Q Consensus 164 --------l~~~~~--------------------------------~-~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~ 202 (274)
T Consensus 655 PIESaEDLAkQteIaYGt~~~GSTkeFFr~Skiavy~kMW~yM~SaepsVFv~t~aeGv~rVRksKGkyAfLLEsTmNey 734 (897)
T KOG1054 655 PIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAFLLESTMNEY 734 (897)
T ss_pred CCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHH
T ss_conf 41128887522114344047874688886526799999999975179603654156689998733771675317566566
Q ss_pred HHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
Q ss_conf 98458766732623677687707999818998999999999999997985999998767
Q gi|254781112|r 203 LERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYF 261 (274)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~ 261 (274)
T Consensus 735 ~eqRkPCD-TMKVG-gNLds~GYGiATp~Gs-slr~~vNLAvLkL~E~G~LdKLkNKWW 790 (897)
T KOG1054 735 IEQRKPCD-TMKVG-GNLDSKGYGIATPKGS-SLRNAVNLAVLKLNEQGLLDKLKNKWW 790 (897)
T ss_pred HHCCCCCC-CEECC-CCCCCCCEEECCCCCC-CCCCCHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 64369863-10106-6557765010477773-010202124220110243777642002