HHsearch alignment for GI: 254781112 and conserved domain: PRK00489

Probab=94.93  E-value=0.064  Score=31.58  Aligned_cols=170  Identities=15%  Similarity=0.137  Sum_probs=93.5

Q ss_pred             CCCCCCHHHHHHHHHCCCCCC-CHHCCCCHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH
Q ss_conf             556689889886431032211-000036756754200--23332222222221112222111112334320231010122
Q gi|254781112|r   85 EFFETAVSGLITGLDTNRYDV-LVNVAITPERQKKYD--FSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLS  161 (274)
Q Consensus        85 ~~~~~~~~~~~~~l~~g~~D~-~~~~~~t~eR~~~~~--fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~  161 (274)
T Consensus        47 ~~~~~R~~DIp~yV~~G~~DlGI~G~D~l~E~~~~v~~~~~LgfG~crlvvAvP~~~-~~~~~~dl~~~rIATkyp~it~  125 (287)
T PRK00489         47 EVLFLRPDDIPGYVADGVVDLGITGEDLLEESDADVEELLDLGFGKCRLVLAVPEDS-DYTGPEDLAGKRIATSYPNLTR  125 (287)
T ss_pred             EEEEECHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCEEEECCCCCCEEEEEEECCCC-CCCCHHHHCCCEEEECHHHHHH
T ss_conf             999988798999997699777551331212068981699706887489999951778-8899578278589730066999


Q ss_pred             HHHHCCCCC--CEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--CHHHH
Q ss_conf             332013454--21336855777755443210036655899999984587667326236776877079998189--98999
Q gi|254781112|r  162 RFAKELKSH--LVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG--NNKLT  237 (274)
Q Consensus       162 ~~l~~~~~~--~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~L~  237 (274)
T Consensus       126 ~yf~~~Gi~~~iv~l~GavE~--aP~lGlAD~-IvDivsTG~TL~~NgL-----k~ie~Il~S~A-~LI~n~~~~~~~k~  196 (287)
T PRK00489        126 RYLAEKGINARVVELSGAVEV--APRLGLADA-IVDLVSTGATLRANGL-----KEVEVILRSEA-VLIANKAWWDPEKR  196 (287)
T ss_pred             HHHHHCCCCEEEEECCCCEEC--CCCCCCCCE-EEEEECCCHHHHHCCC-----EEEEEEEECEE-EEEEECCCCCHHHH
T ss_conf             999986993799977672304--666681008-9997167487998799-----88357750235-99980776986799


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHCCCCCC
Q ss_conf             99999999999798599999876788877
Q gi|254781112|r  238 RSINEILCAIHLDGTYKKIFDRYFDKNII  266 (274)
Q Consensus       238 ~~in~~l~~l~~~G~~~~I~~kw~g~d~~  266 (274)
T Consensus       197 ~~i~~l~~ri~g--vl~A~~~~~i~~Nvp  223 (287)
T PRK00489        197 EKIDKLLTRIQG--VLRARESKYLMMNAP  223 (287)
T ss_pred             HHHHHHHHHHHH--HHHHHCEEEEEEECC
T ss_conf             999999999999--997731899999787