HHsearch alignment for GI: 254781112 and conserved domain: PRK01066
>PRK01066 porphobilinogen deaminase; Provisional.
Probab=91.56 E-value=1.1 Score=24.00 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=70.2
Q ss_pred HHHHHHHCCCCCCCH-HCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEECCCHHHH---HHH
Q ss_conf 988643103221100-003--6756754200233322222222211122221111123-343202310101223---320
Q gi|254781112|r 93 GLITGLDTNRYDVLV-NVA--ITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDL-TDKTVAQILGTDLSR---FAK 165 (274)
Q Consensus 93 ~~~~~l~~g~~D~~~-~~~--~t~eR~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL-~g~~V~~~~g~~~~~---~l~ 165 (274)
T Consensus 80 ele~aLl~g~iDiAVHSlKDlP~~~~l~i~av-~~R~d~rDvLv~~~~----~~l~~lp~~a~IG----TSS~RR~aql~ 150 (234)
T PRK01066 80 DVDFLVLSGKCDLAIHSAKDLPEPPKLTVVAI-TAGLDPSDLLVYAEK----YLLQPLPKRPRIG----SSSLRREELLK 150 (234)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCEEEEE-ECCCCHHHHHHCCCC----CCCCCCCCCCEEE----CCCHHHHHHHH
T ss_conf 99999976987789871578899999768999-657898888760467----6412288668773----16661999999
Q ss_pred C--CCCCCEEE-CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCC--CCCCEEEEEECCCHHHHHHH
Q ss_conf 1--34542133-6855777755443210036655899999984587667326236776--87707999818998999999
Q gi|254781112|r 166 E--LKSHLVFS-HNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMK--DNSAVAFMMRKGNNKLTRSI 240 (274)
Q Consensus 166 ~--~~~~~~~~-~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~~L~~~i 240 (274)
T Consensus 151 ~~~pdl~i~~iRGNI~TRl~Kl~~g~~DaiILA~----AGL~RLgl~~~~~~~lp~~~~pgQGalaIe~R~dD~~~~~ll 226 (234)
T PRK01066 151 LLFPSGIILDIRGTIEERLKLLERGKYDAIVVAK----AAVLRLGLRLPYTIELPPPYHPLQGRLAITAKKHIAKWKTLF 226 (234)
T ss_pred HHCCCCCEEECCCCHHHHHHHHCCCCCCEEEHHH----HHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHH
T ss_conf 8789997896408999999986178989533898----999875897754585589887886828899807979999999
Q ss_pred H
Q ss_conf 9
Q gi|254781112|r 241 N 241 (274)
Q Consensus 241 n 241 (274)
T Consensus 227 ~ 227 (234)
T PRK01066 227 L 227 (234)
T ss_pred H
T ss_conf 9