HHsearch alignment for GI: 254781112 and conserved domain: PRK09495
>PRK09495 glnH glutamine ABC transporter periplasmic protein; Reviewed.
Probab=100.00 E-value=0 Score=320.90 Aligned_cols=220 Identities=29% Similarity=0.453 Sum_probs=198.9
Q ss_pred HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC-HHCCCCHHHHH
Q ss_conf 58958999628998724870469984889885216789976299855566898898864310322110-00036756754
Q gi|254781112|r 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVL-VNVAITPERQK 117 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~-~~~~~t~eR~~ 117 (274)
T Consensus 23 ~~~~l~Vg~~~~~pPf~f~--~-~g~~~GfdvDl~~~ia~~lg~~~e~~~~~~~~~i~~l~~g~~D~~~~~~~~T~eR~~ 99 (247)
T PRK09495 23 ADKELVVATDTAFVPFEFK--Q-GDKYVGFDVDLWAAIAKELKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKK 99 (247)
T ss_pred CCCEEEEEECCCCCCEEEC--C-CCEEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEECCCCCCHHHHH
T ss_conf 4994999989987980576--7-992788299999999999699469997788999999976995636466014789984
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCC--CCCCEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 20023332222222221112222111112334320231010122332013--4542133685577775544321003665
Q gi|254781112|r 118 KYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKEL--KSHLVFSHNFEQSLQLLLSKRTDATMIP 195 (274)
Q Consensus 118 ~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~grvD~~~~~ 195 (274)
T Consensus 100 ~~~FS~py~~~~~~i~v~~~~~~i~~~~dL~Gk~v~v~~Gs~~~~~~~~~~~~~~i~~~~~~~~~~~aL~~GrvDa~v~d 179 (247)
T PRK09495 100 AIDFSDGYYKSGLLVMVKANNNDIKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHD 179 (247)
T ss_pred HCCCCCCCEEEEEEEEEECCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCEEEEEEC
T ss_conf 33347770772469999899977798245489889984695899999963889866965988999998765873499956
Q ss_pred HHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
Q ss_conf 589999998458766732623677687707999818998999999999999997985999998767888
Q gi|254781112|r 196 DIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKN 264 (274)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d 264 (274)
T Consensus 180 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ia~~k~~~-L~~~in~aL~~l~~dG~~~~l~~kwfG~~ 245 (247)
T PRK09495 180 TPNILYFIKTAGNG--QFKAVGDSLEAQQYGIAFPKGSD-LREKVNGALKTLKENGTYNEIYKKWFGTE 245 (247)
T ss_pred HHHHHHHHHHCCCC--CEEEECCCCCCCEEEEEEECCHH-HHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 89999999848999--78994677776459999928829-99999999999997886999999867999