HHsearch alignment for GI: 254781112 and conserved domain: TIGR02995
>TIGR02995 ectoine_ehuB ectoine/hydroxyectoine ABC transporter solute-binding protein; InterPro: IPR014337 Members of this entry are the extracellular solute-binding proteins of ABC transporters and they closely resemble amino acid transporters. The member from Sinorhizobium meliloti (Rhizobium meliloti) is involved in ectoine uptake, both for osmoprotection and for catabolism. All other members of the seed alignment are found associated with ectoine catabolic genes..
Probab=100.00 E-value=1.8e-34 Score=232.84 Aligned_cols=235 Identities=23% Similarity=0.362 Sum_probs=198.7
Q ss_pred HHHHHHCHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCC-CCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 999841788788589589996289987248704699848898852167899762998-5556689889886431032211
Q gi|254781112|r 27 SYYFVIYPFRTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLK-VEFFETAVSGLITGLDTNRYDV 105 (274)
Q Consensus 27 ~~~~~~~~~~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~-~~~~~~~~~~~~~~l~~g~~D~ 105 (274)
T Consensus 20 ~aa~a~~LeelKeQG~~Ria~-ANE~Pf~y~g~D--Gkv~G~~PdvA~aifK~lGi~dVn~~~te~G~lIPGL~AgRfDa 96 (285)
T TIGR02995 20 AAADALTLEELKEQGFVRIAI-ANEVPFAYVGAD--GKVAGAAPDVARAIFKRLGIKDVNASVTEYGALIPGLKAGRFDA 96 (285)
T ss_pred HHHHHHHHHHHHCCCEEEEEE-CCCCCCCCCCCC--CCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHH
T ss_conf 547552157552353047740-067864002688--53136855789999985481100000356403145410102568
Q ss_pred CH-HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CCCEEEECCCHHHHHHHCCCC---CCEEECCH
Q ss_conf 00-00367567542002333222222222111222-211111233---432023101012233201345---42133685
Q gi|254781112|r 106 LV-NVAITPERQKKYDFSIPYIAHRVLLVVRSDQQ-DIRSFKDLT---DKTVAQILGTDLSRFAKELKS---HLVFSHNF 177 (274)
Q Consensus 106 ~~-~~~~t~eR~~~~~fs~p~~~~~~~~~~~~~~~-~~~~~~dL~---g~~V~~~~g~~~~~~l~~~~~---~~~~~~~~ 177 (274)
T Consensus 97 iaAg~~i~PeRCkqVaft~P~~~~~eallvkKGNPk~L~sY~DiAknP~~K~a~~~G~~e~~~ar~~GVk~eqi~~vPd~ 176 (285)
T TIGR02995 97 IAAGLFIKPERCKQVAFTEPILSLAEALLVKKGNPKELKSYKDIAKNPEVKVAVVAGAVEVKYAREAGVKEEQIVVVPDT 176 (285)
T ss_pred HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEECCC
T ss_conf 86115788566646440688644755211258788887752020068231276124723789998658986607882487
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC--CCEEECCC-----CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC
Q ss_conf 577775544321003665589999998458766--73262367-----76877079998189989999999999999979
Q gi|254781112|r 178 EQSLQLLLSKRTDATMIPDIPFFNFLERRPHDG--NLFKIADR-----MKDNSAVAFMMRKGNNKLTRSINEILCAIHLD 250 (274)
Q Consensus 178 ~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~ 250 (274)
T Consensus 177 ~~~l~~vq~~RaDay~~t~Lt~~~La~K~gd~nVE~~~pfvdPvvkdaPv~i~ygg~AFRpeDkeLRDafn~~L~k~~~s 256 (285)
T TIGR02995 177 ASALKAVQDKRADAYAATELTVKDLAKKAGDANVEVLAPFVDPVVKDAPVRINYGGLAFRPEDKELRDAFNVELAKLKES 256 (285)
T ss_pred HHHHHHHHHHCCCEECCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 16788877403422003323478898533897620004321531058873411672011666677787998999986246
Q ss_pred CHHHHHHHHH-CCCC
Q ss_conf 8599999876-7888
Q gi|254781112|r 251 GTYKKIFDRY-FDKN 264 (274)
Q Consensus 251 G~~~~I~~kw-~g~d 264 (274)
T Consensus 257 ~e~~Ki~apyGfs~~ 271 (285)
T TIGR02995 257 DEFKKIVAPYGFSKK 271 (285)
T ss_pred CCCHHHHCCCCCCHH
T ss_conf 540112213688888