HHsearch results for GI: 254781112 and protein with PDBid: 2pfy_A
>2pfy_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.95A {Bordetella pertussis tohama I}
Probab=97.67 E-value=0.00032 Score=44.43 Aligned_cols=169 Identities=10% Similarity=0.040 Sum_probs=97.4
Q ss_pred EEHHHHHHHCCCCCCCC--C----CCHHHHHHHHHCCCCCCCH-HCCCCHHHHHHH-CCCCCCCCCC-------------
Q ss_conf 21678997629985556--6----8988988643103221100-003675675420-0233322222-------------
Q gi|254781112|r 71 DLIKEVAHRLNLKVEFF--E----TAVSGLITGLDTNRYDVLV-NVAITPERQKKY-DFSIPYIAHR------------- 129 (274)
Q Consensus 71 dl~~~i~~~lg~~~~~~--~----~~~~~~~~~l~~g~~D~~~-~~~~t~eR~~~~-~fs~p~~~~~------------- 129 (274)
.+++.|.++.+=++++. + .+....++.++.|.+|+.. +.++.+.+...+ .|+.|++..+
T Consensus 22 ~fa~~V~~~t~G~v~i~~~~~g~L~~~~e~~~~v~~G~vd~~~~~~~~~~~~~P~~~~~~lP~l~~~~~~~~~~~~~~~~ 101 (301)
T 2pfy_A 22 QFADEVKAATAGALEIKVQSNSTLLKRPEVKRGVQQGVVQIGEVLVSALGNEDPLFEIDSVPFLASSFNESEKLWKATRP 101 (301)
T ss_dssp HHHHHHHHHTTTSEEEEEECTTSSSCGGGHHHHHHHTSSSEEEEEGGGGTTTCGGGGGGGSTTTSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEECHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999998759908999956876588799999997698775221046652247301025676354779999987744468
Q ss_pred ---------------------CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHH
Q ss_conf ---------------------22221112222111112334320231010122332013454213368557777554432
Q gi|254781112|r 130 ---------------------VLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKR 188 (274)
Q Consensus 130 ---------------------~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~l~~gr 188 (274)
..+.+ ...+.+++||+|++|.+. |.....+++..+...+..+ ..+.+.+|.+|.
T Consensus 102 ~~~~~~~~~g~~~l~~~~~~~~~~~~---~~pi~s~~DlkG~kiR~~-~~~~~~~~~~lGa~pv~~~-~~evy~aLq~G~ 176 (301)
T 2pfy_A 102 LLAQRLDKQGIVLVYGSPWPPQGIYT---KKPVAALADLKGTRFRAY-SASTSHMAALMGAVPTTVQ-TPEVPQAFSTGV 176 (301)
T ss_dssp HHHHHHHTTTEEEEEEEECCCCEEEE---SSCCSSGGGGTTCEEEEC-SHHHHHHHHHTTSEEEECC-GGGHHHHHHTTS
T ss_pred HHHHHHHHCCCEEEEECCCCCCEEEE---CCCCCCHHHHCCCEEECC-CHHHHHHHHHCCCCCCCCC-CCCHHHHHHCCC
T ss_conf 99999973590797751677613675---799899689769867347-4569999997588510244-420146776584
Q ss_pred HHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC-----CHHHHHHHHHHHHHHH
Q ss_conf 10036655899999984587667326236776877079998189-----9899999999999999
Q gi|254781112|r 189 TDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG-----NNKLTRSINEILCAIH 248 (274)
Q Consensus 189 vD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~L~~~in~~l~~l~ 248 (274)
+|++......... ..-... ... ............+.++++ +++.+..+..+..+..
T Consensus 177 vDg~~~~~~~~~~-~~~~ev-~~~--~~~~~~~~~~~~~~~n~~~~~~L~~~~q~~l~~a~~~~~ 237 (301)
T 2pfy_A 177 IDAMLTSPATGVD-SQAWDY-VKY--YYDAQAFIPQSFVIANKRAFQRLPAEVRQAVLDAGAKAE 237 (301)
T ss_dssp CSBEEECHHHHHH-TTGGGT-CCE--EEECCCCCCEEEEEEEHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCC-CCCCEE-EEE--EECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 1034247300012-334214-457--733885204889998299885399999999999999999