HHsearch results for GI: 254781112 and protein with PDBid: 2vpn_A
>2vpn_A Periplasmic substrate binding protein; ectoine, hydroxyectoine, trap-transporter, periplasmic binding protein, transport; HET: 4CS; 1.55A {Halomonas elongata} PDB: 2vpo_A* 3gyy_A
Probab=97.44 E-value=0.00047 Score=43.39 Aligned_cols=104 Identities=12% Similarity=-0.035 Sum_probs=67.4
Q ss_pred CCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCC
Q ss_conf 21111123343202310101223320134542133685577775544321003665589999998458766732623677
Q gi|254781112|r 140 DIRSFKDLTDKTVAQILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRM 219 (274)
Q Consensus 140 ~~~~~~dL~g~~V~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (274)
.+++++||+|++|.+..+....++++..+...+..+ ..+.+.+|.+|.+|++........ .. +....... .....
T Consensus 131 pi~s~~DLkG~kiR~~~~~~~~~~~~~lGa~pv~~p-~~evy~aLq~G~iDg~~~~~~~~~-~~-~~~ev~~y--~~~~~ 205 (316)
T 2vpn_A 131 PITSPEDFDNKKIRTMTNPLLAETYKAFGATPTPLP-WGEVYGGLQTGIIDGQENPIFWIE-SG-GLYEVSPN--LTFTS 205 (316)
T ss_dssp CCCSGGGGTTCEEEECSCHHHHHHHHHHTCEEEECC-GGGHHHHHHHTSCSEEEEEHHHHH-HT-TGGGTCCE--EEECC
T ss_pred CCCCHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC-CCCCCHHHHCCCEEEEECCCCCCC-CC-CEEEEECC--EECCC
T ss_conf 889978976880762488058999997598432453-001230653586104752521001-22-00111044--13143
Q ss_pred CCCCCEEEEEECC-----CHHHHHHHHHHHHHHH
Q ss_conf 6877079998189-----9899999999999999
Q gi|254781112|r 220 KDNSAVAFMMRKG-----NNKLTRSINEILCAIH 248 (274)
Q Consensus 220 ~~~~~~~~~~~k~-----~~~L~~~in~~l~~l~ 248 (274)
.......+.++++ +++++..+.++..+..
T Consensus 206 ~~~~~~~~~~n~~~w~~L~~~~q~~l~~a~~~~~ 239 (316)
T 2vpn_A 206 HGWFTTAMMANQDFYEGLSEEDQQLVQDAADAAY 239 (316)
T ss_dssp CCEEEEEEEEEHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 3343368774399997399999999999999999