HHsearch results for GI: 254781112 and protein with PDBid: 3fxb_A
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, membrane, transport protein; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=97.66 E-value=0.00018 Score=45.97 Aligned_cols=193 Identities=10% Similarity=0.104 Sum_probs=107.7
Q ss_pred HHHCCCEEEEECCCCCCEEEEEECCCCCEEEE-EEEEHHHHHHHCCCCCCCCC----CCHHHHHHHHHCCCCCCCH-HCC
Q ss_conf 88589589996289987248704699848898-85216789976299855566----8988988643103221100-003
Q gi|254781112|r 37 TEDQSALRVGTDGIYPPHSFHAQDGRGELTGF-DIDLIKEVAHRLNLKVEFFE----TAVSGLITGLDTNRYDVLV-NVA 110 (274)
Q Consensus 37 ~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~-~~dl~~~i~~~lg~~~~~~~----~~~~~~~~~l~~g~~D~~~-~~~ 110 (274)
.+.+.++|+++. +|| |.+.|. ..++.+.|.++.+-++++.+ .+...+++.++.|.+|+.. +.+
T Consensus 11 ~~~~~t~~~a~~--~~~---------~~~~~~~~~~fa~~Vee~t~G~I~i~p~g~Lg~~~e~~~~v~~G~id~~~~~~~ 79 (326)
T 3fxb_A 11 IEGRDTWRYAFE--EAM---------TDVQGVYAQKFKEEIEANSDHEIQLFPYGTLGESADIMEQTQDGILQFVDQSPG 79 (326)
T ss_dssp ----CCCEEECS--SCT---------TSHHHHHHHHHHHHHHHSSSCCCEEECTTSSCSHHHHHHHHHHTSCSEEECCHH
T ss_pred HCCCCEEEEECC--CCC---------CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCC
T ss_conf 162557999678--999---------987899999999999976598799987983688799999997698528975140
Q ss_pred CCHHHHHH-HCCCCCCCCCC---------------------------CCCCC--------CCCCCCCCCCCCCCCCCEEE
Q ss_conf 67567542-00233322222---------------------------22221--------11222211111233432023
Q gi|254781112|r 111 ITPERQKK-YDFSIPYIAHR---------------------------VLLVV--------RSDQQDIRSFKDLTDKTVAQ 154 (274)
Q Consensus 111 ~t~eR~~~-~~fs~p~~~~~---------------------------~~~~~--------~~~~~~~~~~~dL~g~~V~~ 154 (274)
+.+..... -.|+.||...+ ..++. -.....+++++||+|++|.+
T Consensus 80 ~~~~~~p~~~i~~lPfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~~g~~~~~s~kpi~s~~DlkG~kiR~ 159 (326)
T 3fxb_A 80 FTGSLIPEAQVFFVPYLLPTDQDHLARFFKESKAINDMFKPLYADQGLELLNMFPEGEVAMTTKTPVTTCSDLDEVKFRV 159 (326)
T ss_dssp HHTTTSGGGGGGGSTTCSCSCHHHHHHHHHHCHHHHTTSHHHHHTTTEEEEEEEEEEEEEEEESSCCSSGGGSTTCEEEE
T ss_pred HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHHHHCCCCEEC
T ss_conf 01224614665307645773099999985136999999999988619714322103624664698999979976871200
Q ss_pred ECCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--
Q ss_conf 101012233201345421336855777755443210036655899999984587667326236776877079998189--
Q gi|254781112|r 155 ILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG-- 232 (274)
Q Consensus 155 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-- 232 (274)
..+.....+++..+...+..+ ..+...+|.+|.+|+........ ....-.... ..+ ...........+.++++
T Consensus 160 ~~s~~~~~~~~~~Ga~pv~i~-~~Ev~~aLq~G~vDg~~~~~~~~-~~~~~~ev~-~y~--t~~~~~~~~~~~~~n~~~w 234 (326)
T 3fxb_A 160 MTNPLLVESYKAFGATPTPLP-WGEVYGGLQTNVIQGQENPTFFL-YSTKIYEVT-DYI--TYAGHNNFTTAVMANKDFY 234 (326)
T ss_dssp CSCHHHHHHHHHHTSEEEECC-GGGHHHHHHTTSCCEEEEEHHHH-HHTTGGGSC-SEE--EECCCCEEEEEEEEEHHHH
T ss_pred CCCCHHHHHHHHCCCCCCCCC-CCCHHHHHHCCCCCEEECCCHHH-CCCCCCCCC-CEE--EECCCCCCCEEEEEEHHHH
T ss_conf 486068999997599752565-10044798668866132261221-243432303-458--7346423200147628987
Q ss_pred ---CHHHHHHHHHHHH
Q ss_conf ---9899999999999
Q gi|254781112|r 233 ---NNKLTRSINEILC 245 (274)
Q Consensus 233 ---~~~L~~~in~~l~ 245 (274)
+++.++.|.++..
T Consensus 235 ~~L~~e~q~~l~~a~~ 250 (326)
T 3fxb_A 235 DGLSAEDQQLVQNAAL 250 (326)
T ss_dssp HHSCHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHH
T ss_conf 4089999999999999