HHsearch results for GI: 254781112 and protein with PDBid: 3gxa_A
>3gxa_A Outer membrane lipoprotein GNA1946; periplasmic, L-methionine bingding, protein binding; 2.25A {Neisseria meningitidis}
Probab=98.26 E-value=7.6e-07 Score=60.66 Aligned_cols=204 Identities=11% Similarity=0.016 Sum_probs=111.5
Q ss_pred HHHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCC-CHHHHHHHHHCCCCCCCH-H-CC-
Q ss_conf 8788589589996289987248704699848898852167899762998555668-988988643103221100-0-03-
Q gi|254781112|r 35 FRTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFET-AVSGLITGLDTNRYDVLV-N-VA- 110 (274)
Q Consensus 35 ~~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~-~~~~~~~~l~~g~~D~~~-~-~~- 110 (274)
....+.++|+||+.+. |+. + +..+.++.++++.|++++++.. ++....++|.+|++|+-. + ..
T Consensus 17 ~~~~~~~~i~ig~~~~--~~~----~-------~~~~~v~~~~k~~Gi~Ve~v~f~d~~~~n~AL~~G~iD~n~~q~~p~ 83 (275)
T 3gxa_A 17 DNGAAKKEIVFGTTVG--DFG----D-------MVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPY 83 (275)
T ss_dssp ------CEEEEEEETT--HHH----H-------HHHHTHHHHHHTTTCEEEEEEESSSSHHHHHHHHTSCSEEEEECHHH
T ss_pred CCCCCCCEEEEEEECC--CHH----H-------HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEECCCCHHH
T ss_conf 6778885289996069--879----9-------99999899999659879999957833578998669955431445788
Q ss_pred ---CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEEECCCHHH-H---HHHCCCC-------------
Q ss_conf ---67567542002333222222222111222211111233-4320231010122-3---3201345-------------
Q gi|254781112|r 111 ---ITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLT-DKTVAQILGTDLS-R---FAKELKS------------- 169 (274)
Q Consensus 111 ---~t~eR~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~-g~~V~~~~g~~~~-~---~l~~~~~------------- 169 (274)
++.++...+....+.+..+..++++ .+++++||+ |++|++..+.+.. + .+++.+.
T Consensus 84 l~~~~~~~g~~l~~v~~~~~~~~glys~----k~ksl~dl~~G~kIaip~d~sn~~raL~~L~~~Gli~l~~~~~~~~~t 159 (275)
T 3gxa_A 84 LDDFKKEHNLDITEVFQVPTAPLGLYPG----KLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTAS 159 (275)
T ss_dssp HHHHHHHHTCCEEEEEECCBCCCEEEES----SCCCGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSSEECTTCCGGGCC
T ss_pred HHHHHHHCCCCEEEEEEEECCCEEEEEC----CCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCC
T ss_conf 9999997799679985631155066632----656541358999899824863688999999866953116887755454
Q ss_pred -----------CCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--CHHH
Q ss_conf -----------421336855777755443210036655899999984587667326236776877079998189--9899
Q gi|254781112|r 170 -----------HLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG--NNKL 236 (274)
Q Consensus 170 -----------~~~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~L 236 (274)
+++.. +..+..+.| +.+|+++.....+ ............. +........+++|++ |++.
T Consensus 160 ~~di~~n~~~l~~~~~-~~~~l~~~l--~dvD~avi~~~~~----~~agl~~~~~l~~-e~~~~y~nvivvr~~~~d~~~ 231 (275)
T 3gxa_A 160 KADIAENLKNIKIVEL-EAAQLPRSR--ADVDFAVVNGNYA----ISSGMKLTEALFQ-EPSFAYVNWSAVKTADKDSQW 231 (275)
T ss_dssp GGGEEECTTCCEEEEE-CGGGHHHHT--TTSSEEEECHHHH----HHTTCCGGGCSEE-CCCCTTCCEEEEEGGGTTCHH
T ss_pred CCHHHHCCCCCEEEEC-CHHHHHHHC--CCCCEEEECCCHH----HHCCCCHHHCCCC-CCCCCEEEEEEEECCCCCCHH
T ss_conf 0004327656459985-666631312--6755899646468----7759982340002-778763699998076779599
Q ss_pred HHHHHHHHHHHHHCCHHHHHHH-HHCCCCCCC
Q ss_conf 9999999999997985999998-767888775
Q gi|254781112|r 237 TRSINEILCAIHLDGTYKKIFD-RYFDKNIIS 267 (274)
Q Consensus 237 ~~~in~~l~~l~~~G~~~~I~~-kw~g~d~~~ 267 (274)
...+-+++ ++.+..+.++ +|=|.-+++
T Consensus 232 ik~l~ea~----~s~ev~~~i~~~y~G~~~pa 259 (275)
T 3gxa_A 232 LKDVTEAY----NSDAFKAYAHKRFEGYKSPA 259 (275)
T ss_dssp HHHHHHHT----TSHHHHHHHHHHSTTCBCCT
T ss_pred HHHHHHHH----CCHHHHHHHHHHCCCEEECC
T ss_conf 99999997----69999999998779918825