HHsearch results for GI: 254781112 and protein with PDBid: 3h7m_A
>3h7m_A Sensor protein; histidine kinase sensor domain, kinase, phosphoprotein, transferase; 2.40A {Geobacter sulfurreducens}
Probab=100.00 E-value=6.1e-43 Score=283.94 Aligned_cols=226 Identities=22% Similarity=0.360 Sum_probs=202.8
Q ss_pred HHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHH
Q ss_conf 78858958999628998724870469984889885216789976299855566898898864310322110000367567
Q gi|254781112|r 36 RTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLVNVAITPER 115 (274)
Q Consensus 36 ~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~t~eR 115 (274)
.+.++++|+||++.+||||.|. |++|++.|+++|+++++++++|++++|+++||.+++..+++|++|++++++++++|
T Consensus 6 ~~~~~~~i~v~~~~~~pP~~~~--~~~G~~~G~~~Dl~~~i~~~~g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~~~~r 83 (234)
T 3h7m_A 6 PRDRHRTIVVGGDRDYPPYEFI--DQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQGISWSEKR 83 (234)
T ss_dssp -CCSSSCEEEEEETEETTTEEE--CTTSCEESHHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHTTSSSEEEEEECCHHH
T ss_pred HHHCCCCEEEEECCCCCCEEEE--CCCCCEEEHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEECCCCCHHH
T ss_conf 2456991999989998990799--99998887699999999999499669951799999999977997554210244433
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCC--CCCCEEECCHHHHHHHHHHHHHHCCC
Q ss_conf 5420023332222222221112222111112334320231010122332013--45421336855777755443210036
Q gi|254781112|r 116 QKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKEL--KSHLVFSHNFEQSLQLLLSKRTDATM 193 (274)
Q Consensus 116 ~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~grvD~~~ 193 (274)
++.+.||.||+....++++++++..+++++||+|++||++.|+.+..++.+. +.+++.+++..+++++|.+||+|+++
T Consensus 84 ~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dl~~~~i~v~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~i 163 (234)
T 3h7m_A 84 ARQIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCDYAV 163 (234)
T ss_dssp HTTEEEEEEEEEEEEEEEEESSSCCCSSGGGGTTSCEEEETTSHHHHHHHTTTCGGGEEEESSHHHHHHHHHTTSSSEEE
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCEEE
T ss_conf 14346577644245499998403344786784698243437987999999732577158841157689999769956999
Q ss_pred CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
Q ss_conf 655899999984587667326236776877079998189989999999999999979859999987678887
Q gi|254781112|r 194 IPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNI 265 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d~ 265 (274)
.+...+.+++++.+... ..+........+++++++|++++|++.||++|.+|++||++++|++||||.+-
T Consensus 164 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~l~~~ln~~l~~l~~~G~~~~i~~ky~G~~~ 233 (234)
T 3h7m_A 164 VAMVPGMYIIRENRLTN--LVPVARSIAAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWLGVLE 233 (234)
T ss_dssp EEHHHHHHHHHHTTCTT--EEEEEEEEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHTHHHHHHHHSTTCCC
T ss_pred ECHHHHHHHHHHCCCCC--CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
T ss_conf 41788999998668875--41025677775289999589999999999999999969599999985379999