HHsearch results for GI: 254781112 and protein with PDBid: 3k2d_A
>3k2d_A ABC-type metal ION transport system, periplasmic; alpha/beta domain, immune system; 2.60A {Vibrio vulnificus}
Probab=97.61 E-value=0.00012 Score=47.14 Aligned_cols=202 Identities=11% Similarity=0.028 Sum_probs=102.8
Q ss_pred HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCC-CCHHHHHHHHHCCCCCCCH-HC-CCCH--
Q ss_conf 58958999628998724870469984889885216789976299855566-8988988643103221100-00-3675--
Q gi|254781112|r 39 DQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFE-TAVSGLITGLDTNRYDVLV-NV-AITP-- 113 (274)
Q Consensus 39 ~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~-~~~~~~~~~l~~g~~D~~~-~~-~~t~-- 113 (274)
++.+||||..+. |.. .+ + .-..+.++++.|+++|++. .++..+..+|.+|++|+.. +. .+..
T Consensus 4 ~~~~irvG~~~~--~~~--------~~--~-~~~~k~~~e~~Gl~Ve~~~f~~g~~~~~Al~~G~iD~~~~g~~~~~~~~ 70 (237)
T 3k2d_A 4 DTSKVKVGVMAG--AEA--------QV--A-EVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQ 70 (237)
T ss_dssp CCCCEEEEEETT--HHH--------HH--H-HHHHHHHHHHHCCCEEEEEESCTTSHHHHHHHTSCSEEEEEEHHHHHHH
T ss_pred CCCEEEEEEECC--CHH--------HH--H-HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEEECCHHHHHHH
T ss_conf 887389996079--859--------99--9-9997778986698899998088256899997699777875457899864
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH-----CCCCC-------------C----
Q ss_conf 6754200233322222222211122221111123343202310101223320-----13454-------------2----
Q gi|254781112|r 114 ERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAK-----ELKSH-------------L---- 171 (274)
Q Consensus 114 eR~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~-----~~~~~-------------~---- 171 (274)
.+...+.+..--......+.++.+. ..+..++++|++|++..++....++. ..... +
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~kGk~ia~~~~~s~~~~~l~~l~~~~~~~~~~~~~~~~~~~d~~~~~ 149 (237)
T 3k2d_A 71 VEDRDYKLTIAGNTFVYPIAGYSKQ-VKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENP 149 (237)
T ss_dssp HHHHCCCEEEEEECCCCCCEEECSS-CSCSTTCCTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCSSCCGGGEEECT
T ss_pred HCCCCCEEEEEECCCCCEEEEECCC-CCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 1058950799842554406998378-765546417987999558844999999999849974465544466502055453
Q ss_pred --EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECC--CHHHHHHHHHHHHHH
Q ss_conf --1336855777755443210036655899999984587667326236776877079998189--989999999999999
Q gi|254781112|r 172 --VFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKG--NNKLTRSINEILCAI 247 (274)
Q Consensus 172 --~~~~~~~~~~~~l~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~L~~~in~~l~~l 247 (274)
............+..+++|+.+......... ...+.... +. ......+....++++++ |++....+-+++
T Consensus 150 ~~~~~~~~~~~~~a~~~~~~da~~~~~p~~~~a-~~~~~~~~-i~-~~~~~~~~~~~~v~r~~~~n~e~v~k~v~A~--- 223 (237)
T 3k2d_A 150 KNITIMELDAAQLPRSLDDVALSIINTTYASSI-NLTPEKDG-VF-VEDKESPYVNLIVARQDNVQNENVQNFVKAY--- 223 (237)
T ss_dssp TCCEEEEECGGGHHHHTTTSSEEEECHHHHGGG-TCCHHHHC-SE-ECCSSSSCCEEEEEETTTTTSHHHHHHHHHH---
T ss_pred CCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHH-CCCCCCCE-EE-ECCCCCCEEEEEEECCCCCCCHHHHHHHHHH---
T ss_conf 322433331667799752476369664288872-05876555-76-4588987369999865001989999999997---
Q ss_pred HHCCHHHHHHHHHC
Q ss_conf 97985999998767
Q gi|254781112|r 248 HLDGTYKKIFDRYF 261 (274)
Q Consensus 248 ~~~G~~~~I~~kw~ 261 (274)
+ +-+..+.+++.|
T Consensus 224 ~-~~ev~~~i~e~~ 236 (237)
T 3k2d_A 224 Q-TEEVYTAAKEIF 236 (237)
T ss_dssp T-SHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHC
T ss_conf 8-999999999860