HHsearch results for GI: 254781112 and protein with PDBid: 3kzg_A
>3kzg_A Arginine 3RD transport system periplasmic binding protein; arginine transport system, protein structure initiative II(PSI II); 2.06A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.3e-40 Score=267.93 Aligned_cols=222 Identities=26% Similarity=0.457 Sum_probs=192.3
Q ss_pred CCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCH-HCCCCHHHHHH
Q ss_conf 89589996289987248704699848898852167899762998555668988988643103221100-00367567542
Q gi|254781112|r 40 QSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNRYDVLV-NVAITPERQKK 118 (274)
Q Consensus 40 ~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~~~~~~~~~l~~g~~D~~~-~~~~t~eR~~~ 118 (274)
+..|+||++++||||.|.+ +.+|++.||++|+++++++++|++++|++++|.+++..|++|++|+++ +++++++|.+.
T Consensus 2 s~~l~vg~~~~~pP~~~~~-~~~g~~~G~~~dl~~~ia~~~g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~~~~~r~~~ 80 (237)
T 3kzg_A 2 SLNLTIGTSKFNPPFEVWS-GNNSSLYGFDIDLMQEICRRLHATCTFEAYIFDDLFPALKNREVDLVIASMIITDERKKH 80 (237)
T ss_dssp CCEEEEEEESEETTTEECC-CTTSCCBSHHHHHHHHHHHHTTCEEEEEEECGGGHHHHHHTTSSSEECSSCBCCTTGGGT
T ss_pred CCCEEEEECCCCCCCEEEE-CCCCCEEEEHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEECCCCCCHHHHHC
T ss_conf 8758999899989836898-999928873999999999996997599977999999999869987772136799789730
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC--CCCCCEEECCHHHHHHHHHHHHHHCCCCCH
Q ss_conf 002333222222222111222211111233432023101012233201--345421336855777755443210036655
Q gi|254781112|r 119 YDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKE--LKSHLVFSHNFEQSLQLLLSKRTDATMIPD 196 (274)
Q Consensus 119 ~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~grvD~~~~~~ 196 (274)
+.||.||+.....++++++. .+++++||+|++||+..|+.+..++.+ ...++..+.+.++++++|.+||+|+++.+.
T Consensus 81 ~~fs~py~~~~~~~~~~~~~-~~~~~~~l~g~~i~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~GrvD~~i~~~ 159 (237)
T 3kzg_A 81 FIFSLPYMESNSQYITTVDS-KISTFDDLHGKKIGVRKGTPYARQVLSENRNNQVIFYELIQDMLLGLSNNQVDASLMDY 159 (237)
T ss_dssp CEECCCSBCCEEEEEEETTC-SCCSGGGGTTCEEEEETTSTHHHHHHHTCSSCEEEEESSHHHHHHHHHTTSSSEEEEEH
T ss_pred CCCCCCEEECCCEEEECCCC-CCCCHHHHCCCCCEEECCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCEEEEEECH
T ss_conf 20467434034012331555-56898897698214325868999998734564011258889988898659657999659
Q ss_pred HHHHHHHHHCCCCCCC----E-EECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf 8999999845876673----2-62367768770799981899899999999999999798599999876788
Q gi|254781112|r 197 IPFFNFLERRPHDGNL----F-KIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDK 263 (274)
Q Consensus 197 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~ 263 (274)
..+.+++++.+..... . .+........++++++++++++|++.||++|++|++||++++|.+||||=
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~in~~l~~l~~~G~~~~i~~kyf~g 231 (237)
T 3kzg_A 160 EAAKYWMASEPYAYKLIGKKYKLIGKKISIGEGYSIMANPDQFVLIKKINKILLEMEADGTYLRLYSEYFEG 231 (237)
T ss_dssp HHHHHHHTTSSTTHHHHCCSEEEEEEEEECTTCBCCEECGGGHHHHHHHHHHHHHHHHSSHHHHHHHHHC--
T ss_pred HHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 999999985896410215320113665556763699988999999999999999999787899999746899