HHsearch results for GI: 254781112 and protein with PDBid: 3mpk_A

>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=100.00  E-value=9.7e-41  Score=270.29  Aligned_cols=227  Identities=17%  Similarity=0.272  Sum_probs=202.4

Q ss_pred             HHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCC-CHHHHHHHHHCCCCCCCHHCCCCHH
Q ss_conf             788589589996289987248704699848898852167899762998555668-9889886431032211000036756
Q gi|254781112|r   36 RTEDQSALRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFET-AVSGLITGLDTNRYDVLVNVAITPE  114 (274)
Q Consensus        36 ~~~~~~~l~v~~~~~~pP~~~~~~d~~g~~~G~~~dl~~~i~~~lg~~~~~~~~-~~~~~~~~l~~g~~D~~~~~~~t~e  114 (274)
                      .++++++||||++.+||||+|.  |++|++.|+++|+++++++++|++++++++ +|.+++..+++|++|+++++++|++
T Consensus        27 wl~~~~~l~v~~~~~~~P~~~~--~~~g~~~G~~~dll~~i~~~lg~~~~~~~~~~~~~~~~~l~~g~~Di~~~~~~t~~  104 (267)
T 3mpk_A           27 WMADHPVVKVAVLNLFAPFTLF--RTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSA  104 (267)
T ss_dssp             HHHHCSEEEEEEETEETTTEEC--CTTCCCBSHHHHHHHHHHHHHCCEEEEEEESSHHHHHHHHHHTSCSEEEEEECCGG
T ss_pred             HHHHCCEEEEEECCCCCCCEEE--CCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHH
T ss_conf             9982993999984898995699--89998877899999999998499579998289999999863696659964789988


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHC--CCCCCEEECCHHHHHHHHHHHHHHCC
Q ss_conf             7542002333222222222111222211111233432023101012233201--34542133685577775544321003
Q gi|254781112|r  115 RQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLSRFAKE--LKSHLVFSHNFEQSLQLLLSKRTDAT  192 (274)
Q Consensus       115 R~~~~~fs~p~~~~~~~~~~~~~~~~~~~~~dL~g~~V~~~~g~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~grvD~~  192 (274)
                      |.+.+.||.||+....+++++++...+.+++||+|++||++.|+.+..++.+  .+.+++.+++..+++++|.+||+|++
T Consensus       105 r~~~~~~s~p~~~~~~~~v~~~~~~~~~~~~~l~g~~i~~~~g~~~~~~l~~~~~~~~i~~~~~~~~~l~~L~~GrvDa~  184 (267)
T 3mpk_A          105 RESFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAV  184 (267)
T ss_dssp             GTTTEEECSCSEEECEEEEEESSTTSCSSGGGCTTCEEEEETTCTHHHHHHHHCTTSEEEEESSHHHHHHHHHHTSCSEE
T ss_pred             HHHCCCCCCCEECCCEEEEEECCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEE
T ss_conf             98407767621304404542014434579889658730554154056999972887417998068987789887986768


Q ss_pred             CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
Q ss_conf             66558999999845876673262367768770799981899899999999999999798599999876788877
Q gi|254781112|r  193 MIPDIPFFNFLERRPHDGNLFKIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNII  266 (274)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~in~~l~~l~~~G~~~~I~~kw~g~d~~  266 (274)
                      +.+...+.+++++.+.....+ .......+.+++++++|++++|++.||++|.+|+ +|++++|++||||+|..
T Consensus       185 i~~~~~~~~~l~~~~~~~~~v-~~~~~~~~~~~~~~~~k~~~~L~~~in~~L~~l~-~~~~~~I~~kw~g~d~~  256 (267)
T 3mpk_A          185 VQTQISASYYVNRYFAGKLRI-ASALDLPPAEIALATTRGQTELMSILNKALYSIS-NDELASIISRWRGSDGD  256 (267)
T ss_dssp             EEEHHHHHHHHHHHCTTTEEE-EEECSSCCEEEEEEEETTCHHHHHHHHHHHHTSC-HHHHHHHHHTTC-----
T ss_pred             ECCHHHHHHHHHHCCCCCEEE-EECCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC-HHHHHHHHHHHCCCCCC
T ss_conf             427999999998389997699-5046777526999994899999999999999708-55999999986799989