RPSBLAST alignment for GI: 254781112 and conserved domain: TIGR01096
>gnl|CDD|162200 TIGR01096, 3A0103s03R, lysine-arginine-ornithine-binding periplasmic protein. Length = 250
Score = 126 bits (319), Expect = 6e-30
Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 43 LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR 102
+R+GT+ YPP F ++D G+L GFD+DL K + R+ K +F E GLI L +
Sbjct: 26 VRIGTETGYPP--FESKDANGKLVGFDVDLAKALCKRMKAKCKFVEQNFDGLIPSLKAKK 83
Query: 103 YDVLV-NVAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLS 161
D ++ ++ITP+RQK+ DFS PY A VV+ ++ +DL KTV GT
Sbjct: 84 VDAIMATMSITPKRQKQIDFSDPYYATGQGFVVKKGSDLAKTLEDLDGKTVGVQSGTTHE 143
Query: 162 RFAK-ELKS--HLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIA-- 216
++ K K +V +++ + L + R DA + D +P +G FK
Sbjct: 144 QYLKDYFKPGVDIVEYDSYDNANMDLKAGRIDA-VFTDASVLAEGFLKPPNGKDFKFVGP 202
Query: 217 -----DRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYF 261
D + +RKG+ +L + N+ L AI DGTY+KI ++F
Sbjct: 203 SVTDEKYFGDGYGIG--LRKGDTELKAAFNKALAAIRADGTYQKISKKWF 250