RPSBLAST alignment of GI: 254781112 and protein with PDBid: 2q88

>2q88_A EHUB, putative ABC transporter amino acid-binding protein; substrate-binding protein, compatible solues, osmoprotection; HET: 4CS; 1.90A {Sinorhizobium meliloti} PDB: 2q89_A* Length = 257

 Score = 80.2 bits (196), Expect = 4e-16
 Identities = 31/237 (13%), Positives = 68/237 (28%), Gaps = 13/237 (5%)

Query: 43  LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR 102
            R+      PP +       G+++G   D+ +E+  RL +       +  G +       
Sbjct: 15  ARIAIAN-EPPFTA--VGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAG 71

Query: 103 YDVLVNVAITPERQKKYDFSIPYIAHRVLLVVR---------SDQQDIRSFKDLTDKTVA 153
               +   +  + ++    +                         +DI    D       
Sbjct: 72  RHDAITAGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPG 131

Query: 154 QILGTDLSRFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLF 213
                 L+  A   +  ++   + +  L++L   R D   +P +   + + +        
Sbjct: 132 GGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKANDPNVEV 191

Query: 214 KIADRMKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRY-FDKNIISSV 269
                           RKG+  L  + +  L  +   G + KI + Y F      S 
Sbjct: 192 LAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAKAAMST 248