RPSBLAST alignment of GI: 254781112 and protein with PDBid: 3i6v

>3i6v_A Periplasmic His/Glu/Gln/Arg/opine family-binding protein; structural genomics, transporter, PSI-2, protein structure initiative; HET: LYS; 2.00A {Silicibacter pomeroyi} Length = 232

 Score =  143 bits (361), Expect = 4e-35
 Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 11/224 (4%)

Query: 43  LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR 102
           +R+GT+G YPP++F   +  GE+ GF+ +L  E+  R  L  E+ +     +I  L +  
Sbjct: 7   VRMGTEGAYPPYNF--INDAGEVDGFERELGDELCKRAGLTCEWVKNDWDSIIPNLVSGN 64

Query: 103 YDVLVN-VAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLS 161
           YD ++  ++IT ER +  DF+  YI       V +         DL+    AQ   T  +
Sbjct: 65  YDTIIAGMSITDERDEVIDFTQNYIPPTASSYVATS-----DGADLSGIVAAQT-ATIQA 118

Query: 162 RFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRMKD 221
            +  E  + LV     E+++  + +   DA           +      G L  + D +  
Sbjct: 119 GYIAESGATLVEFATPEETIAAVRNGEADAVFADRDYLVPIVAESG--GELMFVGDDVPL 176

Query: 222 NSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNI 265
              V   +R+ + +L    +  + ++  DGT   +  ++F ++ 
Sbjct: 177 GGGVGMGLRESDGELRGKFDAAITSMKEDGTLNTMIKKWFGEDA 220