RPSBLAST alignment of GI: 254781112 and protein with PDBid: 3k4u

>3k4u_A Binding component of ABC transporter; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: LYS; 2.62A {Wolinella succinogenes} Length = 245
 Score =  109 bits (272), Expect = 8e-25
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 6/223 (2%)

Query: 43  LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFETAVSGLITGLDTNR 102
           LRVG +  Y P     +D +G + GFD+DL +E+A  + +K++   T+  GLI GL T +
Sbjct: 7   LRVGLEPGYLPFEM--KDKKGNVIGFDVDLAREMAKAMGVKLKLVPTSWDGLIPGLVTEK 64

Query: 103 YDVLV-NVAITPERQKKYDFSIPYIAHRVLLVVRSDQQD-IRSFKDLTDKTVAQILG--T 158
           +D+++  + I+ ER  + +F  PYI     L+V+   +  ++S+KDL    +  +     
Sbjct: 65  FDIIISGMTISQERNLRVNFVEPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGV 124

Query: 159 DLSRFAKELKSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADR 218
                AK L  +        ++  +       A M      FN               D 
Sbjct: 125 SAEYAAKRLFKNAKLKTYDTEAEAVQEVLNGKADMFIFDLPFNVAFMAQKGQGYLVHLDT 184

Query: 219 MKDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYF 261
                 + + ++KG+      +N  L  I  DG+Y ++++R+F
Sbjct: 185 SLTYEPLGWAIKKGDPDFLNWLNHFLAQIKHDGSYDELYERWF 227