RPSBLAST alignment of GI: 254781112 and protein with PDBid: 3mpk
>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A Length = 267
Score = 138 bits (349), Expect = 1e-33
Identities = 39/226 (17%), Positives = 88/226 (38%), Gaps = 7/226 (3%)
Query: 43 LRVGTDGIYPPHSFHAQDGRGELTGFDIDLIKEVAHRLNLKVEFFET-AVSGLITGLDTN 101
++V ++ P + D + G +++ + R L E V LI L +
Sbjct: 34 VKVAVLNLFAPFTLFRTDE--QFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSG 91
Query: 102 RYDVLVNVAITPERQKKYDFSIPYIAHRVLLVVRSDQQDIRSFKDLTDKTVAQILGTDLS 161
D+ + + R+ FS PY+ + +++V R D L +TVA + +
Sbjct: 92 EADMAGALFVNSARESFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAI 151
Query: 162 RFAKEL--KSHLVFSHNFEQSLQLLLSKRTDATMIPDIPFFNFLERRPHDGNLFKIADRM 219
+ ++ +V + N +++ ++ + + DA + ++ R G L +
Sbjct: 152 PLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQ-TQISASYYVNRYFAGKLRIASALD 210
Query: 220 KDNSAVAFMMRKGNNKLTRSINEILCAIHLDGTYKKIFDRYFDKNI 265
+ +A +G +L +N+ L +I + I R+ +
Sbjct: 211 LPPAEIALATTRGQTELMSILNKALYSIS-NDELASIISRWRGSDG 255