HHsearch alignment for GI: 254781113 and conserved domain: COG4135
>COG4135 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=95.25 E-value=0.18 Score=26.76 Aligned_cols=129 Identities=15% Similarity=0.186 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
Q ss_conf 9999999999999999999999999---9970676379999999999985553222222--------------1112233
Q gi|254781113|r 20 AIVVTLPIACISFVISLIIGFFIAV---IRIFFSDTIISLIMHFYVWIFRGTPLLVQLF--------------VIFYGLP 82 (226)
Q Consensus 20 ~l~~Tl~~~~~~~~i~~~lg~~la~---~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~--------------~~~f~~~ 82 (226)
T Consensus 53 ~~~~alL~~l~stl~~tv~Alli~~~~i~~fw~~P~w~R-i~~~-ls~LLAiPHvAfA~~~a~LfA~~G~L~RLly~~f~ 130 (551)
T COG4135 53 HLPQALLATLVSTLIATVGALLIALLVIVAFWPGPKWQR-ICHR-LSWLLAIPHVAFATSAALLFADGGFLLRLLYDYFP 130 (551)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHH-HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf 228999999999999999999999999999648971999-9864-00887454899999999994584078988414777
Q ss_pred HHHC------CCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 3210------14433333-310011000001578999887528-33689986517463565778752235764456
Q gi|254781113|r 83 HIGI------VFDSFVAI-IISLTLNFSAYISEIIRSSIISIP-KGQWDASYAIGLTRKQTIRHIILPQTITTSAV 150 (226)
Q Consensus 83 ~~g~------~~~~~~~~-ii~l~l~~~~~~~~i~r~~l~~v~-~~~~EAA~alG~s~~q~~~~iilPqal~~ilp 150 (226)
T Consensus 131 ~ft~p~d~~L~~Dpfaigl~~~La~KEvpFllli~la~L~ql~lt~~~~l~asLGYsr~q~~~w~l~P~~~r~ir~ 206 (551)
T COG4135 131 YFTPPPDWLLPMDPFAIGLGATLAVKEVPFLLLILLAVLSQLALTQQVILLASLGYSRWQCLNWLLLPSVARAIRM 206 (551)
T ss_pred CCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEHHHHHHHHHH
T ss_conf 7789802135688146677889888413199999999876878999999999736663432021003878999999