HHsearch alignment for GI: 254781113 and conserved domain: COG4168
>COG4168 SapB ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
Probab=98.72 E-value=1.2e-07 Score=60.77 Aligned_cols=146 Identities=17% Similarity=0.313 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH-----HHHHC-
Q ss_conf 999999999999999999999999999999997067637999999999998555322--2222111223-----33210-
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL--VQLFVIFYGL-----PHIGI- 86 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~l--v~l~~~~f~~-----~~~g~- 86 (226)
T Consensus 68 ~~l~~vfPaT~ELC~~af~lal~~GiPlG~iagv~~~kw~d~~i~~is~~G~SiPvFWlAl~ll~f~slh~~~~pv~Gry 147 (321)
T COG4168 68 EQLLEVFPATMELCFLAFGLALIVGIPLGMIAGVTRHKWLDKLISAISLLGFSIPVFWLALLLLLFFSLHLGWLPVSGRY 147 (321)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCE
T ss_conf 99998666189999999999999846479887754230788999999985467459999999999999751411034310
Q ss_pred -----------------CCC--C------------CCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHCCCHHH
Q ss_conf -----------------144--3------------33333100110000015789998875-283368998651746356
Q gi|254781113|r 87 -----------------VFD--S------------FVAIIISLTLNFSAYISEIIRSSIIS-IPKGQWDASYAIGLTRKQ 134 (226)
Q Consensus 87 -----------------~~~--~------------~~~~ii~l~l~~~~~~~~i~r~~l~~-v~~~~~EAA~alG~s~~q 134 (226)
T Consensus 148 dLLY~ikpiTGfalIDawls~spyRt~~iqs~lqHl~LP~lvL~iaPTtevir~mr~s~~~Vl~qNyikaA~trGlS~~~ 227 (321)
T COG4168 148 DLLYEIKPITGFALIDAWLSDSPYRTEMIQSAIQHLILPTLVLSVAPTTEVIRLMRQSTEEVLNQNYIKAAATRGLSRFT 227 (321)
T ss_pred EEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 14565045466277889863770578999999999888899999734799999999989999742489999965603558
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57787522357644567787889875
Q gi|254781113|r 135 TIRHIILPQTITTSAVPLSSEFISIL 160 (226)
Q Consensus 135 ~~~~iilPqal~~ilp~l~~~~i~li 160 (226)
T Consensus 228 Ilr~hVlrNalPplIPq~g~qfs~mL 253 (321)
T COG4168 228 ILRRHVLRNALPPLIPQLGLQFSTML 253 (321)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99999985047854441367999999