HHsearch alignment for GI: 254781113 and conserved domain: COG4176
>COG4176 ProW ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].
Probab=99.90 E-value=8.4e-23 Score=143.93 Aligned_cols=195 Identities=19% Similarity=0.236 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999999999999999999999970676379999999999985553222222--111223332101443333
Q gi|254781113|r 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLF--VIFYGLPHIGIVFDSFVA 93 (226)
Q Consensus 16 ~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~--~~~f~~~~~g~~~~~~~~ 93 (226)
T Consensus 89 GlW~~tM~TLaLVl~a~~isivIGiPlGI~~--ar~~~~~~i~~PiLDlMQTmP~FVYLIPav~lFGlG~--------VP 158 (290)
T COG4176 89 GLWDQTMQTLALVLTATLISIVIGIPLGIWA--ARSPRVYRIVRPILDLMQTMPTFVYLIPAVMLFGLGN--------VP 158 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--HCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC--------CC
T ss_conf 5089999999999999999999800489998--5368899999689999860542799999999907888--------76
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33100110000015789998875283368998651746356577875223576445677878898752679999976999
Q gi|254781113|r 94 IIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPE 173 (226)
Q Consensus 94 ~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~ig~~e 173 (226)
T Consensus 159 g~iAtvIfA~PP~IRlT~LGIrqVp~eliEA~~AFG~t~~Q~L~kVqLPlA~PtIMaGiNQtIMlALsMVVIAsMIGa~G 238 (290)
T COG4176 159 GLIATVIFAMPPMIRLTNLGIRQVPAELIEAADAFGATPRQKLFKVQLPLALPTIMAGINQTIMLALSMVVIASMIGAGG 238 (290)
T ss_pred EEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 34136565368158776324101789999999970898888978720743077899866799999999999999875787
Q ss_pred HHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCC
Q ss_conf 9999999-983235779999999999999999999999999998-6213747
Q gi|254781113|r 174 IFQTAQR-IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS-VTQHTYS 223 (226)
Q Consensus 174 l~~~a~~-i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr-~~~~~~~ 223 (226)
T Consensus 239 LG~~Vl~~i~~---ldig~g~~aGlaIVilAIiLDRitq~~~~~~~~~~~~~ 287 (290)
T COG4176 239 LGQEVLRGIQR---LDIGLGFEAGLAIVILAIILDRLTQAFGRKAKSRHRRR 287 (290)
T ss_pred CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 76899999887---21377776308999999999999888454531022124