HHsearch alignment for GI: 254781113 and conserved domain: PRK09433

>PRK09433 thiP thiamine transporter membrane protein; Reviewed.
Probab=99.89  E-value=7.7e-21  Score=133.15  Aligned_cols=212  Identities=16%  Similarity=0.154  Sum_probs=144.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             30899999999999999999999999999999999999999999706763799999999999855532222221112233
Q gi|254781113|r    3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP   82 (226)
Q Consensus         3 ~~w~~~~~~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~   82 (226)
T Consensus        41 ~~~~~~~~d~---~~~~~~~~t~~~a~~st~ls~~lg~~~A~~l~r~~f~-gr~~l~~l~~lp~~~P~~v~a~~~~~~~g  116 (536)
T PRK09433         41 GDWSAVWQDS---YLWHVVRFSFWQAFLSALLSVLLAIPLARALYRRRFP-GRGLLLRLCAMTLVLPVLVAVFGLLSVYG  116 (536)
T ss_pred             CCHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             6799995688---8999999999999999999999999999999955873-49999999999987699999999999982


Q ss_pred             ----------HHHCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             ----------32101----4433333310011000001578999887528336899865174635657787522357644
Q gi|254781113|r   83 ----------HIGIV----FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTS  148 (226)
Q Consensus        83 ----------~~g~~----~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~i  148 (226)
T Consensus       117 ~~G~l~~~l~~~g~~~~~~iyg~~gil~a~~~~~~P~~~~~~~~~l~~i~~~~~e~A~~LG~~~~~~f~~v~lP~~~pai  196 (536)
T PRK09433        117 RSGWLASLLQSLGLEWPFSIYGLQGILLAHVFFNLPLATRLLLQSLESIPSEQRQLAAQLGMRGWQFFRLVEWPWLRRQL  196 (536)
T ss_pred             CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             16449999998288778640129999999999999999999999998199999999987598986888863489887889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             567787889875267999997699----99999999983235779999999999999999999999999998621
Q gi|254781113|r  149 AVPLSSEFISILKSTSVASTITIP----EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ  219 (226)
Q Consensus       149 lp~l~~~~i~lik~tsl~s~ig~~----el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~  219 (226)
T Consensus       197 ~~~~~LVF~~~~~sF~~vl~LGGgp~~~Tlev~IYq~~~~~~D-~~~Aa~La~i~l~i~~~l~~l~~~~~~~~~~  270 (536)
T PRK09433        197 PPVAALIFMLCFTSFATVLTLGGGPKATTIELAIYQALSFDFD-LARAALLALLQLVLCLLLVLLSQRLSKAIAV  270 (536)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9999999999999888999955886403689999999986479-9999999999999999999999998224200