HHsearch alignment for GI: 254781113 and conserved domain: PRK09497
>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.93 E-value=8.1e-25 Score=155.02 Aligned_cols=207 Identities=15% Similarity=0.187 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------H
Q ss_conf 999999999999999999999999999999997067637999999999998555322222211122333----------2
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPH----------I 84 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~----------~ 84 (226)
T Consensus 59 ~~~~~~l~nSl~~a~~~tvi~~~ig~~~A~~l~~~~~~-~r~~~~~l~~~P~~~p~~v~~~~~~~~~~~~G~ln~~l~~l 137 (285)
T PRK09497 59 PLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHK-VRPLLLFLLIVPFWTNSLIRIYGLKIFLGTKGYLNEFLLWL 137 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 89999999999999999999999999988863016754-38999999999998799999999999814330788999981
Q ss_pred HCC------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 101------44333333100110000015789998875283368998651746356577875223576445677878898
Q gi|254781113|r 85 GIV------FDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFIS 158 (226)
Q Consensus 85 g~~------~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~ 158 (226)
T Consensus 138 g~~~~p~~~l~~~~~vii~~v~~~lPf~~l~l~a~l~~i~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~fi~ 217 (285)
T PRK09497 138 GVIDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLP 217 (285)
T ss_pred CCCCCCHHHHCCHHHHHHHHHEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHHHHH
T ss_conf 57566235423498887875313120677437878840896899999875999789132022081089999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 75267999997699999999999832--35779999999999999999999999999998621374
Q gi|254781113|r 159 ILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTY 222 (226)
Q Consensus 159 lik~tsl~s~ig~~el~~~a~~i~~~--~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~ 222 (226)
T Consensus 218 s~~~F~~~~~lgG~~~~~l~~~i~~~~~~~~~~~~aaA~svil~~i~~~~~~i~~r~~k~~~kk~~ 283 (285)
T PRK09497 218 AMGMFYVSDLLGGAKNLLIGNVIKSQFLNIRDWPFGAATSITLTIVMGLMLLVYYRASKLLNKKVE 283 (285)
T ss_pred HHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
T ss_conf 988762100104897552999999999870690699999999999999999999999999530141